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GrainGenes Sequence Report: AA019947

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Sequence
AA019947
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA019947
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTAGTATCTCTAGCGGTGGCTATAAAAGTCAGGCTCCTCCAATCCAATCC
CCTCTCCCCCACGCCGACCGACGCGCACCGGCCACTGTCCCTGTCACGTT
CGGCCCCGCTCGCTCCCAGTCCCACTGTGATCCCACGCTTCCGTTCCACC
GCAGAATGCCACCTCCGACGACTCCAAGAACCAAGCGATCGGAAGCGGCC
AAGCTCCTCCTCCTCCTCACCAGCTCCCTCCTCCTGCTCTGCACATTCCT
CCTCGCCCAAAATGCGTTCGCCGCCACCACCACCGACGACCACCACCACC
AGCACCGGGCGCGCGCCCTGGTCGAAGACGGCGCCGAGACCGAGCACGCG
GCCGCCGTGGAGCGGCATTGCGCCGGCATGCTGCACCGGGACGTGTGCGT
GTCGACGCTGGCCTCCATCCCGGGCCTGGCGGGGAAGCCGGTCGCGGAGG
TGATCTCCTCGGTGGTGTCCCGCGCCGCGTCGGCGGTGCGCGCGGCCGCG
TCCAACGGCACCTCCTACCTGTCCCGCCCGGGCCGGCTGCGCGTGCGCGA
CCGGCTCGCGCTGGCCGACTGCCTGGAGCTGTTCGGGCACACGCTGGACC
AGCTGGGCACGGCGGCGGCCGAGCTCGCGGCCGCCGGGAACCGCACCGCG
GCGGAGTCGGTGGCCGGCGTGCAGACGGTGCTGTCGGCGGCCATGACCAA
CCAGTACACCTGCCTGGACGGGTTCGCCGCCCCTCCCGGCGCAGCCGCGG
ACGACGGCCGCGTCCGGCCCTACATCCAGGGCCGCATCTACCACGTCGCG
CACCTCGTGTCCAACTCGCTCGCCCTGCTCCGCCGCCTCCCGCAGCGCCA
GCGCCACCGCCGCGAGGCGCTGGAGGGGTATGGCCCCGTGCGGCGCGGGT
TCCCGGCGTGGGTATCGAGAGCAGACCGGAGGCGGCTGCAGGAGGCGGCG
CCGGACGTGGTGGTGGCCAAGGACGGGAGCGGGAACTTCACGACGGTGGG
GGAGGCGGTGGCGGCGGCGCCGAACAACAGCGCGACGCGGTACGTGATCC
ACATCAGGGCGGGGGGCTACTTCGAGAACGTGGAGGTCGGGAGCGAGAAG
ACGAACCTGATGCTCGTCGGCGACGGCATGTGGAAGACCGTCATCAAGGC
CTCCCGCAACGTCGTCGACAACTACACCACCTTCCGCTCCGCCACGCTCG
GTACGTACGCGTAGACTCGAATGCTTGTTACGTAGCTGGTGGCTCGCACG
TGCTGCCCCGCACGCCGCACTTCACTTCACTAGCACTGGCCGCTCGCTCC
AGTGCTGGCTAGCTAGCTACACAGTGCCTGCCGCACGATGAGTACCACGA
GCCGCTGTCGGCATGCCGAGCGAGCGCCGACGCCGGCACGCACGGCCGGA
CGGGGTCGGGGTGACGCGGTGCTGACGACGCCTCATCGTAAGAGTGCACG
CGCGCGCGGTACGTGAGATCCGAGCTCGTGAGCGAGCGTCCGTGGCAAGT
ACATTGGTCACGAGCGCCATCGTTGGTCAAGTAAAGAAGGGGGAGCAGCG
TCTGCTTCTACTACTAGGACACTGGTACAGTACTAGGTGCAGGAACTGGA
CCTTTACAGACAAATATACACTTGAGATAATAATCGGATTAATTTGGTAC
CATCTGGACTGCATTATTGTGCTACTTCACAACGAGCTCATCCCGTTAAA
TGTCTCGGCGACTAGGCACGTTAATTGTCGCCATTCCGGTCCAAGAGATT
ACATTTGGAGTCTGTTTCCATTTTTAAAATAATCTTCGCTAAAAAATACT
TGGTTCGATCGTGCTATTGTGTAGGCTTAGAGCTTTTCGTTGGGTTGTAC
TTTGGCCTTGAGTTTCTTGGCCTTCTTTTGGTCGAGCTCAGGCCGACATT
CGGACGCTAGCGGTGCCGAATCATCTGGCTTGTACACGGGCCGTTGAATC
TCTTTGGCGCCATGGCGGCATTGCGGATACGGGGAGGCGGCAGGGGGAAT
TGGAGAGAAGCATTGTTCAAAAAATCAGCCGATATGTCGAGAGCGGTCAA
TATGCCAATTTTCTGATTTATCGTCTGATTTTTTGATTTATCACCCGATA
AATCGGCCCGTACGCTGAAAATCATCAATTTTTAGCCGACCGATAATTAC
CAATAAGCGATATCCTTAACATTGGAGAGAAGTGGATAGATGGCAGAGAA
GTGGATAGATGGCGGGAGCTTGCCATCGAGTTGGGGAAAAAAAGGAGGAA
AATCGGCTTTTTTCTCCATTCGGCACCCCTAGACGAACCTCGGGGCGCTG
AGTTCGGGGTGAGTTCACCGGATAAAATTTTGGGGCCAATCCGGCGAATT
TCAAGGTCTAGGAACGTGGATGGGAAAAATTCCGCCCGATGGCAAAAAAA
AAGCATGGGGTGGCGTTCGTGGAGGCGCCGAGTGGAGATGCTCTTAGGGT
GTGTTTGGTTCTAGAACGAGAGGGAATGGAACGGAGTGAGTGCATTCCGA
GGGCATGGAATGGTTCTGACCCTGTGTTCGGTTCGGAAAAGAACAAGGAA
CGGAATGGTCCCATATTGTGTTCGGTTGGGAGAATTTGGACAGGAACAGA
ATAGCTATAATGATGCTTAAAATTCTAATAATTTGAGCTTAAATTTAACA
ATTAATTAACGGTATAAAAAATATTTTTTTTATCTTAAAATCTTTGCTAA
AAGTATCAAATCATAGAAATCTTTTTGTTTTAAAATCTTTGCAGAATATA
CTCAAATTAGAGTAGGCGCGGAACGGGGACAGATTCCGTCCCACCGAATT
GCAGAACCGAACACATGCTTAGAGCACACGGTCCTTGATTGTTTACAGTC
CTTGATTGTTTGCCTGTGCAGTTATGAAGTCCCAAAATTAGGTAAGGTAC
GGTGGGTGAGGCCACGGAAACATGCGCGGCAAAATGGAAGTGGAAATGCT
CGCTAGCTCTGCCGGTGTGTGTGTGTGTGTGTGGCCGCGAACGCAGGACG
AGATCGGGGAGGGCAGCAGAAACCGATCCTATGATCTGTTCTGACCGCAT
TCGTTCTACAACAATGGGCAGCCAATTATAGCACGATGGAGTGCCCTTTT
TTGGGGGTGGTGCTTCGATCTTCTTTTCTATTTTGTCATCATTTCGTCTT
TTCGGATGGATGGCCCCAGCCCAGCCTCATGTTTTTGTAGGCACCGACAG
ACAGGTAGATTCGGTTGCAAAACGGTGAGCACCCGATACGGTGGAGGCGG
CAGCAGATATCCCTGGTAATAATGCCTCACAAAGTGAGACAAGAGCACAT
GCACGCACGCCTGGTAAAAGCGTTTCAAGACGAGCAATCTAGTTAGGCTC
CCGGGTGCCGCCTTTTTGAGCCAAGGAACAAGAGCAAGCGGACAGTGCTG
GTCGTATCGACCGATGTGGAGAGGCGTGGCACGCTGCTGCCTGCCTGGCC
TATCCGGCTGACCGGCCTCGGCCACCACGCGTGTACTTTTCGGCTTCGTC
TGGTTGTTGCTCCATGGGCACACACCACCGGAGCCTTAATAACTCCGTCG
CTGAACGCTACTGGACGAGATGTGGTTGGCACGGCACTGTCGTCGTCGTC
GTCGTCGGTCCACGGTGTCGGTGCGGAGACAAATGCATCGCCACGCCAGA
CCCGTACCTGTGCCTCGCATTCATGCCCACCCGCGGCTCGGCTGCGCCCA
TACGACCCCGGCCCGACGCGTGCGCTGCCGGCCACATGAACTGTACCACC
GTACGGACGTGCCAACACACGCACATTGCATCGATCATACGAAGATGACG
ACATAATACTCCCTCCGTCCAAAAATAACTAAGCACTACCTGTAAAAGTT
TTCCAGTTTGATTGGCGTTGTACAGTAGACAGCAAATACTACGTACTAGT
ACGTGCTCCAGCTCGGCGTGTCCGACATCCGTTAATTATTACTACTACTT
CGACGCTGACACCAATCTCAACCTGCGCAGCGGTGGTCGGGGCGGGGTTC
CTGGCGCGAGACCTGACGGTGGAGAACGCGGCGGGGCCAGGGAAGCACCA
GGCGGTGGCGCTCCGCGTGAACGCGGACCTCTCGGCCTTCTACCGCTGCA
GCTTCGCGGGGTACCAGGACACGCTCTACGCGCACTCGCTCCGGCAGTTC
TACCGCGACTGCGACGTCTACGGCACCGTCGACTTCGTCTTCGGCGACGC
CGCCGTGGTGCTCCAGAACTGCAGCCTCTACGCGCGCCGCCCGGACGCCG
GCCAGAAGAACGTGTTCACGGCGCAGGGCCGCGAGGACCCCAACCAGAAC
ACGGGCATCTCCGTGCAGGGCGGCAAGGTGGCCGCCGCCGCCGACCTGAT
CCCCGTGCTGGGCGGCTTCTCCTCCTACCTCGGCCGGCCATGGAAGCAGT
ACTCCCGGACCGTGTTCATGCAGTGCAAGATGGAGGGGCTCGTCCACCCC
AGGGGATGGCTCGAGTGGAACGGCTCCTTCGCGCTCGACACGCTCTACTA
TGCCGAGTACATGAACCGGGGGCCCGGCGCAGATACGTCCGGGAGGGTGA
CGTGGCCCGGGTACCGCGTGCTTGGCGGGGACGCCGATGCGGCAAACTTC
ACCGTGCAGTCGTTTGTCCAGGGCGACATGTGGCTCAACTCCAGCTCCTT
CCCCTACACGCTCGGCCTCAGATAGAAATTAGAATGATGATTACTAGTAC
CAAGATTTTTTTGGTTCCTACTACTAGTTCACACGTGCTATTCTGTAACT
GGTCTCCGTGTGAAATAAAGGCGGCTCATGTACTATAGTACCTCAGGTTT
GGCCGAAGGCTAGTTAGTCATGAAAGGGGCCAGGGGATCTCATTCCACTG
TCTGTACACCAAAGAAAAACTGCTAGTGCAGATGTTCAAATCAGCGATAC
TCACTGTACTGTAACTAGTGTTCAGATCTGTAATAATACTCTCATGTAAC
TGTACTGTACTGTACTGGTAGGGTTGGTCCCTTCACAACAGGACGAACAT
TTATGTGTGCATATATATAGTCTCTTATGGACAAATAAACGATGGAATAT
CACAAGGAAAGCAGGAAGTGTACATCCAGGAATCTAACACCACTTATTTC
ACCATTCTATCTACCTCTGGCTGCTTTCCGGACCTTTTCCAGATGTTCCT
TGTCCCCCTTTTATTGAACCTGGACACCATCCTGATCTTACAGCCTTGCC
CTTTGCAGCTCCAGCTTCGCGATCGTGCCGAGATGGACTTCATCGGGGCC
GTCCGCGATCCGCAGTGTCCTAGCGGTTGCCCATAGATGAGATAGGGCTG
TGTCGGATGAGACGCCAGCAGCGCCATGGACTTGCATTGCCATGTCGAGC
ACTTTGAGGGCCATGTTTGGAGCTGCAACCTACATGAGGGCCAGATTCAC
TCGATTTGGAGGTTGCTAGTGTGATAAAAAGAAAGTGCCAAATTGCTGAA
CCTTGGTTGTTTACCTTGGCCATTGCGAGGATTCCACGGGCTTTCTTGTT
CCCATGCCGGTCGAGTTGGTCCGCTGCTTCAAGCACCAAAAGCCTAGTTT
GTTCCAGTTCTATTCGACACTGGAGAACACCTCCATGTTAGTAGAACACA
CACAAGAAAAGATGCGAGGAAAGAAACGATGGAGTTCAGAAACTGAAATG
TCCCTAAACAAAAGGAACAACGAGCTGATAACTAACTCACATGGCACCTA
GCTTCTGTGAAATAGACACTTCTGTTTAAATGAACCACCTAAACGGTTAA
ATGAATCATGCAAGCGGTCAAAGAGACCATACCTTTGCAAGGTCTGATTG
AAATGACCCATGCTGTGCAATCCTCTTTCCAAATACCGTCCTACTTAATG
CCCTCTCAACCATCATGTTCATGCCACGTTCTGCTGCTCCTATTAGTCTC
ATGCAATGATGTAGTCTTCCTGGACCTAGTCTTCCCTGCCAAGTATCTTA
AATATGACAAAGAATTCACATATTATAACAAAATTATTAGTGGCAACAGA
AGAGTATTGCTTACTTGAGCAATCTCAAAACCCCGTCCTTCCCCTAGGAG
GATATTTGTGGCCGGAACACGCACGTTATCAAAAGTAATCTCTGCATGTC
CATGTGGTGCGTCATCGAATCCAAAGACTAGCAGGGGTCTCCTTATCTGC
ACTCCAGGAGTGTTGATATCCACTAAAATCATCGACTGCTGCTTATGTTT
AGGTGCAGAAAAATCTGTTTTTCCCTGCATGAAGCAAACACTTTTACATT
AAATGGAAAATATACATCACCCATATCACCGATTTCACGAATAAATGTTA
TAGTTACCATTAATATCAGGATTTTGCACCTTGGGTCCATAGCCCCACTG
GTCCACCATTTCTTGCCATTTATCACATAGAAATCTCCCTGCCTGCCATG
GGGAAAATATCACAGATAATCAGCAACACAGAAATCTCAGATTAAAGGAA
GGAATATCATATGTATAATCTATCAAAAGAGGGGGGCAGAAAACGTATGC
CATGAGGATATAATTGCTTTCCTGGCAATACGCCAGAATTTGGAGGTTTC
GAGCAGTGTACTATATTATTTTTTGGCTAGTAAACTGAAATACTTTTGAG
ATGAGAAAATAAATATACAAAATAAAATGCTGGCTAATGTAGGAACTAGG
ATCTCCTTAACATGTCGTTCGCAACTATGTGATAGCCCTTAACAAGGTAA
TAGCTTGTAACTGAAGAGAGATACGAGAGCCTGTAGTGAACACATGTAAT
GAAATATCAACAGCCTAAAGGAACAACAATAACATGCTTGTTGCCTATAT
ATATTTTATGGACTTCATTACCTTGATATTGCACATTCTATATTTGTTGC
ATCCGAAGATGCAACTTGTGGTTCTGTCATTGCAAATCCTGAACGAATTT
TCCCTTCCAGTAAAGGAACAAGCCACTGCTTTTGTTGCTCCTTAGTACCA
TATCTCAGCAAGACCTATAATGAGATTTTTATATCATAAATTCTCGCATA
CAAAATTACTAGCACCAACAAAGCATTCAAACATGACATATGCTGTAAGA
ACCTTCTAAAAAACGATTGGCATACTAAAAATGGATCATATGCCATCTTC
CATTGCTCTATGCTGGGAAACAAAATAACATATCCGACTTAACGATATAC
ATAAAACTGCAGAATCAAGAGGATAGCTGCTACGTCAATAATCTGCAGAT
GCTATACAGGGAGATATTTTAAAAACAAGTATTTTCTCAAGATATGCTTG
CCTAGTGATAGATTGTGAAAATGATGCCTATAAATGAACATAAAATTCTG
TCTTACCTCCATATTACCCGTATCAGGTGCACCGCAGTTAAATATTTGTG
GAGCCCAAACTGAGCGACCCATAATCTCGCATAAATATCCATACTCTAGA
TTTGTGAGACCCGCACCTAGCAAAAGATCATCTGAACTTCCAGGAGAAAT
ATGAGATCGGTCCTCAAGTAGTAGTTCTCTTGCTCTAGCTGCACTATCAA
GCTGCAGCCAACCATTTTACTCAGCACAGAACCCAATATAAAATAAGTGC
ACCTTACATTAGTGAAGTAAAAAACAGGGTTCTTAATTTTTTTATGGATC
AGATAAATGTTAAAGGTGTCAAAAGGAAACAGAAAGTACCGGAATAAACA
AGTTCCACAGTCCCTGCTGTTTTGCTAATGCTTTCAAATTTTCTTCTTCT
GGATGAATTGTCCACCGTGAGGCTGATTGTGCATGCTTGTATAACTCATC
CTCCTTGGGGTATATATGATCTTTCATAAACTTCATTATTTTTTCCCGTA
GCAGCATAACTTTTTCACTAGGAACAAATCTGCCTTGACCATTTGTCAAA
GTTGAACCTTCCTGCTCAGTGTGGAACTCTTGCCTTGAAGCTCTCGAGAA
ATCCGTAACTAACAATTATAGGAAAAGTCCGGACAGTTAACAAAATTTAA
GTTCATTAGACTTTACAAGAATAAAGGATTGTCCCTAAAAAGGAATAAAG
GATCATAGCCGCATTTTACGTCTCTAATTCTCTATGCAAAGTAATTTAGT
TGGAAACAGCAACCAGGTTTAAGAAATCGTAAAGAGCAAGCTTGTCCACA
AAGCACACGAAACGATGAGGCAGGATGCTATGAAATATGATTACCTGTAG
CAGGTCGTTCTGGCAGGACATTTTCTCTATTTATGTAATCCCAGGCACAG
TCAACCATAACATTACCAGCCTTGCCAGCAAATTTAGCACGCTCGCCACC
TGAAGCATTACCCTGCGTGACAGCTCAAATAAATTAGAATAGAAAACAGA
CACATACTTCCAGAGTTAAAGACGAGTACCATAGTCCATCTGTGATATAC
TCCTGCATAGATAGATGCCCCTCGAAACAGTGAAAAGGCAATATAGAACT
TCCAATTTGTTGCAGGCCAGGGTCTTGCCTGAGGAAAGTTGTAAAGAAAG
GGATAATAATCAGTGAGTAAGAGGGGTGTATTTATCCAGCCAGTGTCAAA
ATGCAAACAATAGGATGCTTACAGACATAGAGCAGTATACAGATAGGTAC
TCTTCCAGTTGAGGAATGCCATCTGAAATGACAGGACGCATAAGTCCTCC
AAAGGAAATATTTTCAGTGGGCGTTGAATCAATAATATAGGTCTGCAAGG
ATAAAAAATAATCAAGATAACATTAGATAAATCATGGTTAGCAAAGTGAC
ATAATACCAAGTGATCATAGTTAATCTAACACATAACATCTGAAGAGCTG
GAACTGTTCTTTAGAAAACAAGCAAATCACAGAAGAAATCGTGTTGTAAA
TAGGTCAATGATGGGTAACGATATTATGTATACGGAAGTATTTCACATTT
TTTCGAAGAAAACTTATTCCATATTTCATACCATGCAGTTGTAAGCAACA
TCACTCATCTGATTCCCCAAAGTAGATAGTTCCCAATCAAGTAC

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