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GrainGenes Sequence Report: AA017861

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Sequence
AA017861
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA017861
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AGAACCACTAGTGCCGGTTAACCAGCTAGCTTGCCTCCTCCTTCCCGGTG
CAGTACTGCAGGGCAGCAAGCGGCAGAGCAGCAGCCAAGAAGAAGCCTGC
ATCTCATTGTTCGTCAGCCTGACAAAACCTTCTTCTCGGCGTCGCTTTCG
CACCTAGCGGCTTCGCCGGCCACAAATTTGCTCCGCGCGTGTTGGGTTCG
ACTTCGATCGGAAGATCGCCGTCGCCGTCACCAGTCGTCGCCGACAGGGA
GCTCAACTCACTTAGCTTGGAGAGTAGCGGCCCGGCACTACTAGCCAGGT
ACGTACGTATACGCATACGCCCCGGTTTAAATTTCGTGATGATTACGGGC
GCCGCTTTGTTTAAGTGCCCTGGGGATTACGGGACGCGAATCGACGGGGA
CGTGAACGACCCACGGTGAAAGGATCGGGTGCTCGTTGCTTGTCGTTTAC
TCCCGTGCAGATTTCCGCCTCCGCGCGAGCGCTGTGGTCCGGAGGTTTTT
GTTCTGTTCCAGCTACCTGCCTGCACCGTCCTGTCTCTTGTCCGCTTGCT
CGATCAAGCTCGGCCTGTGACCGTCGAGATTAGTTAAGTGTGTCGTACGG
CATGTATGTACTCGTGAGTTGTTTAGTGCGTAATAGCTGTCCACAACTAC
TAGATTAGCGCTGATCGATGTGTATAGGTTTGTGCGTACTAATACGTATA
AAGTCGATTAGTCACTGTCTCTGTGGTGATGTAGTACTACTAGTACATAG
GTCCAAAATGACTTGGCTGGACTCGGCTAGTCAGCTCAGGTTGCTACCAG
GGTGGTATGTTCTGGTTAGTTCTACCAATCACTGCTGAGTTCTATATCAA
ACCAAATTCTTAGCTGTTTCATAGTTTCATTCTGGAGAACGGAAATACAA
CCCCCGTTCGCTAATATAAAATATTTCAGTAAAATAATTTAATTACCGAA
GCTTCTTATATCAGTGAAACAGAGAAACTAATATTTAGACTTTGTGACCA
TGATTTTGGCCGGGCAAATTGACTTAACATGCAAACCAAATCATTAGTTG
TATTTATGTTTTTGTTTGTTGAGGAAATGAGTTTCATCTTCCCTTTCCTC
GCCGTTTCAAAGGATATTTAACTCCTCCTTTGCCAAAAAGGCAGTGCATA
TAATTTTTTCAAAAGTCAAACGCATGTAAAGTTTTACCAACTATGTAAAA
AAATCTAAAATACGAAATCAATTCCAATAGAATCATCATGGCATATATTT
TCTTATGGTATACTTTTGGTGCTGTAGAACTAGATAATTTTCTCAATAAA
CTTGCTCAAAGTTGATAAAGTTTGATTTTTGAAAAAACTCATATGCACTA
TATTATGACAAGGAGGGAGTAACTATTAATTGGTGAAGTCAATAACCTTT
CAATCTAATTATTGAGATCCACGCTAGTACTATAAAGGAATGAAAAGATC
TTCATCATACGGCTACGAATCAATTGATAGAAATTATTCCAAAACTGATT
ATTGACGTCCACACTAGTATAAAGGGAGCTCGAGATTGATATCCCCCAGC
CTCTCGGATAATAGCAGACCCTCGCGTCGTCTCCCCGTGAGGCGACTCGG
GGGAAACCCTACAAACCCGCCACCGCCGACCCCTACTGCACCACCCTCCC
TCGCCGCCGCCGGCTCACGTCGCCGGGCAAAGCCCGCTTGCGGCCGGTGG
CGGCGGGATCTGTTTCCTCGCGCACTGGATTCTCCAGATCGAGCCCGCGC
TCCAAAGTCCACCGTCGCATCGCTCTGCAGTTCGTCCCCACCTCGCCTCC
TGCCTGCAGCTTCCCCACATCGCCGCCCACCATCCTTCCCCCGCTAGCGC
CCATCCCCAGTCACCGCTCGCTGTCGTAACCGCCACCATCTTCCTCCCAC
CCCTCTCCACCCCATCCAGCTCGACCGCCAGATCCGTCGCCTCCTGCTTC
GGGAGTTTTTGCCCAGGATTGGTGCTCCTCCGTGTCCCTGCCCAGACTGC
ACTCGTCCAAGGTCGTTTTGCATCTCCTTTGAGCAGGATTGGCCCGGCGG
CGCTGGCTCCTGCGTGCCAATCCCGCAGTGTCCCGGTGCGGCGTCTGCTC
TTGTCGGTTCTGCTCTCTACCGGCTTGAGGTAATTTCCATTCAGATCCTG
CTCACGGCCAGGTCCTGGCATAGGTCTTGGTATGCTCTTCTGTGCTGTCC
TTGCTGGGCAGATGTGAGTCGGCCTTGCCAGTCTCTAACGGTGAGTCTCC
TCGAGGTTGTTGTTGGGGTGTCGGGCGAAAGCCCTACGTCGGCGACGCCT
GAGGGCGTCGTGCACCTCCTTGGAGGAGTCGCAAAGGTACCCTCTCACCT
CGGCCATGCTCTATGTCATTTTGATCTGTGCTTGTGGTATCTAGCAGTGT
GTGTTGCGGTTCCGGGCGAAAGCCCTGCACTGAATTGTGCTGGTGATGAA
GACGCCTGTGGGTGTCTTCTCCTTCCTTGGAAGCATCACTTTGGAACCAA
TTCCCCTGCTGGTGTTGGCTCTCTTGGTGGTCATGGTCGTGCTTTGCGAG
CTCGGGTCTTCGTGTTATGTTCTACACCCGTGCCAAGATAAGTTCTTTGG
TAGTTCATGCAACTCTGGTTGACCTTCTATATGGGAGGTTCGTGTTGGCG
GTGAGGTCTCGGTGATCGTGGTCTTTCGATGGCGTTTGGGGTCCTGGTGG
CTTTGCGTTGCTCAGGTTCACTCATTTGGTGGTGGCTGTCTTGTTCGTGG
CCAAGAGGAGGTGCAGTGGCAGTCTCGGTGGAACCTTGCCTTTCGGTGAT
GACCTCGGCAGGGGGATGCCCTTCGACCGCGGCCGTGACTATCCTAGCTC
TGCAAGGTCTAGAGTGATCGCTCGACAAGCGGGTCTCGTTCTCTACACTG
TCTCGACTACAGAATCCTTTCGATCAATCCAATATCACTCCTCCATGCTT
CTCACCGTCTGTTCCAGAGTTGTTGGGTGTTAAGTATGATGCTTGGTGCT
GTAGGCTTTGCTCGAGACCGGTTCCCCCCTTTTTTGTGTTTTTTCCACCG
TTTCTCATGTAAGTGTTGTGTGCTACAGGTGGTAGCCGTTGTGTTTGTAT
CTGGATTGATGTTTTAATGAAAAATGGTTCAGGCCGGCTTTTGCCCGCCG
TAGTTGCCTCAAAAAAAAAACATCTTCATCATAGGCTACGAATCAATTGA
TAGAAGTTATTCTTAAACTCATCGAGAAATAGTCACGTTTGTGGCTCAAA
ATAGATTGGAATAATGGTTAGTGAAATAATGCATTTAGTATCCTCAAACT
AAATTCATATTGAGATTGTTAGTCCATCTCCTACACATGTTCGGTACTTG
TTCGATGACTCGCATTATTTAAATCTTGGAGCCTGACTATAATATATGAC
ACTCTTACCCCGGTTGTATGTACTGTTCAATTTTAGAAAAACAATACGAG
GATCGATTAATACTTTAAAAATATTAGGATCAATTATTACTTAAAAAACA
CGAGGATCAATAATATATTACTTAAAAAGTATATAAATATACGATCGAGC
ATCACGTTGTGGTCAAACAATTTCTTTCCGTGTGGTTGGTTCAATTGATC
GACTCGGGGCTGGGGGCTAGAGTAATATTTTATGGTATGTATCTCTCTCT
GTCTAATGGGATTTGTTTGATGTTTCTTGGTGATGTTCCATCATGACTAG
CCTCCAAACATGCACAAGCAGCTCTCAAGTCCTTCAATAAAATGTTGGTA
CTACTAGCTACCAAGTAGTACCTCTGTTCCAAAATAGACATAATTTGACT
ATTTATAGTTTGACCAACATTTAGTCTACTACTAGTATGCAGTTTTATGC
TATATAAAAAAGACATTACTGATTTGTATTCAACAACATGTTTGTATTAC
CATGGTTTGTAAATATTGACTAGTATATGAGAAATTTATAATTCAAACTC
AAATATGGCAGTATGGACAATAGCATCACTGTCTTGCATTTTAGCACAGA
TGGAGTACAAGCTAGGCTTAATCTTAGTAGTAATAGGCAACATCTAGGAC
ATATACAACACAAATCATTTCCTCGTTGCACTATGCATGGTACATATTCA
CTTGGGCGGTGCAGTCTCTTTTCTTTACCTCTTGTGATAGTTACGACATC
AAATTTTAGATACAAGAATTAGTAGCACCATATTGTTCTACAATTTGATT
TTCATGCTGTCATGATGTAAAGATAACCATATTTCTTTGTAAGAACATTA
TATTTAAATCGCTATACGAGATGCGGTGGTTAGTGACGTCATGAACTAGC
ATAATATGTGGCGTTTCGCCTCTAACATTATGGATTGCCAAAAATCCGTG
ACAATTACGCAGTCACTGTCACACATTAATTTCGGGAGACGAGTTGAATT
TTGTAGCGGCCGCTCCATGGTGACATTGGTAGTATTCTTATCAACTCATA
GCAGCCAAGAAAAATTGAGCTGCAGACTGCAGTGGAGGGCATGAAAACAT
ATGGTCTGAAAAAAAAGACAGAACATAGTACGTAGAGCATCTTCGCGGCA
GACACACTACAATAATATGGAGTGAATCAGCAAATTTCCTCATAGTTAAG
GTCGCCAAATTTTCGGTACATAGAACCGACAATTAGCTGCGCAAGTGAAC
TGTGGGTGGATTGTAGTAGTTGCAAAGATTCCGTGGCAGCCGAACACATC
AGTCAGCATAACTTCCTTTGTTCCCGAACATGTGCTGCCCAAAATTCCAA
ACATCTTCCAAGGCAGAAGGTACGGCGTTCACTTTTGATCCTTGAGAAGA
CGAAGTATACCGGCCGTTGGCGTCACAAAGTCCGACTTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTCTCCCGGGCGGTCTTCCGTACGC
GTACGTCATAGGTGATTAACTAGTGAATGCGCGTCCGTACCATGCATGGT
TTCGTATGAATGCTAGTGACCAGTAAGTGGTAGTGCAGGGTGGAAATCAC
GTGGACACACGCGCATGAACAGGGCAGGGCAGACTAATTAAGCATCCGTT
CTACTAGTACTGGTAGTCAAGGAGAGAGGGCCTGGATCTGGGCCCGACGA
GCAGGCGGACACGGCTGCCTGGCAAGCCCGCGCTTTCAGCCTTTGACTCG
CAACCTTTGTGTTTCCACTCTGTCGCTCGACCGTCCCTCTCTATGGCGCA
CGGATCATGATGCAAATATAAGTGTGTTCGATGTGGCCGAGCTCTAAGCT
CTACTAATTGTGAGTGAGAACTAGCAGAACTGATAACAAATGCATCCACC
ACCTACCTCGACCTGCTTGGCTTAACTCTCTCTCTATATATATACACCCA
ATGCAACCCTTGTAGCCACCACACACCTTCATCGGACAGCATCAGTTGTT
AGTTGTTTGGTCGCTAGTCTAGCTAGCGAGCACATCTCCTCTCGTTCTCA
TCGCCTTTCCACAATCCATCTCTTCGATCCCCCGAACAGATTCTCTAGCC
AAGAGGTACTACATCGAAAATGCAACTCTACATATATGAGGGTGTCCCGG
GCTTATCCTTGCCTTGTGTTTGTTTGAGATTCGTGCACGTTTTTTACATA
GAGAACCTTGGAGTTATAATTTTCTTTCATTTGCATAGTCCTTAATATTT
TCAAATGAGACCTTCTACGTCTGGTTATTCACGTACTAGTTATTACAAAT
TCGATATGAGCTAATGGATCCGGATCACAGGAATCGAGTCATGTTTGAGT
TAGTAAAGAATTAGTACATACTAGAGCATTAACTAGAGAATTAGTACATA
ATTAGTCAGCCACATAAGTAATTTCCGTTCACTGTAGTATAGAACCACTT
TTTTTTAACAGAGACTATACTTAAGGAACTACGTCCGGGGAGTTAGTACA
GAATTACTCAGCCACGGAAATAAAATGAGGGCAAAACAGATCTAGGGGAA
AAATTACATCAATCAAGAATCATAGGAAGAAAATTGGAACGAAGAAGTTC
TGAATTTATATTGATTTTGACCATTCACAAAAAAATTGAATGTTTCTGAA
CATGAGCAAAAAAAGTTGCAAAAAGGGATTTTAATCCCGTTCCAGTTAGA
TCTGTTAAAAAAACAAGATCAATAGAAATAAAAACTGAACAGAACTTCCA
TGTACGTCTCTTTCCTTTTTAATGTACAATGAGCCATGCGTGAATAAACA
AGCAAAAGAAAAATGCTCCAGGATACCTGATTTAGAACATGATACAACCA
TGAACAAAAACCATCACTAAATCCAGATCGGGAAAAAATATAAACAAATT
CCACAAGCAGGAAAAAAATCTCCAAAATAAAAATAGTGGAAGCAATTAAA
TCCAGATCTGGAACAATGGCCACGGCCCTCCTTCCTTCCGGCCGGCCGGC
CGCCGCGGGATCCAACCTTGCTGCACCTATTCTAGTCGCCGAATTAAGCA
GAGGCCTTGGAGCACGGTGGAGGTCCCAGCCCCGGGCGTGGTCGGAGGAG
GAGGATCCAAGTGCGCGGTCGTCGTCTGGCGGTGGTGCGACAGGTAGGAT
GCGGTGAGTTCGGGCTGTGAGGTGCAGGACAGGATCGAGGTGTACATGCC
CCACTTTGGTGTCTATAGGGGCGTGAAGATGGACTTGTCTAGGATGAAAA
TGCAAAACTGTGCATCGCGAATCTTGACGTCCTGTACACCATCGGATAAG
CCGGGCACACCCACGAGGTTGTAGAATCACTGCGTTCGTACTACATGGGA
TAGATCCTAAGTATATGAGAGTATGCATGCATCCATCTCGTCGTAGTAGT
ATTAGACTTGTACTAGTATAGCTGTCCATGCTGGTGCCCATGCTTTAGTG
TCGTCGTATATTCGCTGGCACTTTTAAGTTGTGGTTGCTAGAGAAGTTGT
AGCTATAGGTGTTCTTTCTCTCCTTGTTTATCGGATGCATATTTGATTTA
TTTTCCCGGGAAGCTATACCCGGTAGCTGTGCTGTCCTGTCGGGTTCCCG
GCCGTGGTGCTCGTTGTTGCATGGCTCATGCCATGTGGCTGAGAGCAAGA
ATACGTGTGTACACTAGCCTCGATATATAGTAGCTAGCAGTGCGACGTAG
TAGTAGTACAAAAAATCAAGTTTTTAGCCTAGGCTTAGTCTGCCTATCGT
CCAGGCAAGATGCACTGCTAGCTGGTAGGATTCACGGTCACATCTAGGGA
GGGTAGACCCAATACGGTAATCGACGGAACCGCCGGTTTACAAATTGACA
GACTGTGACGTGCCTCTGCTAGTTAGTCTAGTGGATAGTAGATCGTAACA
TCACAGTGATTATTCTCGGCACATAAACGCAACAGGTCAAAGATCTTATC
GTATCCGTCAGCTGGCAGTACAGTGCGTGTGTGGCCTGTCAAGTCCTTCT
GTAGCTGGCCATGAGTACATGTTCCGTTTCTACACGAGTCCCATGCATAT
GATGCATGGGCGGACCCATGTCCTTCTTCTCCGGTTAAGAAGCTTTGTAC
GTGCAGCGGAAACGTCAAAACTGCCGTGCCCTTTGTGGACTCTAACCGGA
CGGCGCGCTTTTTATCGTACTAGTAGTACGTACTACGTGCGTACGTACCT
TTCTGCCTGTCCCTGGCCGAGCGAGCAGATCATCGAAAATTCGAAAGAGA
CCGGCGGCCCGGAAAAGGCTTTAGGATCCATTAATTGACCTGATGCCGTA
GCACTGTGCCATGGAAGAAGACCGTAAAGATCTCGTGCTCTACATGCGCG
CGGGAGGAAGTCGTGTCAAACTTTGACAGGGAGAAACTGGTGGCCAGTTT
TTCCTCGACGGACGGCGACGCCCGTTGGCGGTACACCGAACCTTCGCGAT
GTACGTATGGCACCGCATGCGGCCAGCGCCGACCGGTCGCCGTCGCCGGC
CGCCGGCGTGCTCTGCCGCTCAACTGGCATGCACCACTCAGGGGCGAGCG
CGCGCGCGTGCCGAAAGTAAAGGAAAAAAATCGTAGCTTTGGAGTTTTCC
CACACACCCGCGCGGGCGATCAGGCTAGCTCGCTCTATAAATGGAGCGCC
TGTCGCGCCGAGCCGAGCTGCAACTTATAGCAGTTCCTTCCGGGCGCACT
GAACCGTCTCAGGGTATACGAGGTTCACCCCAACAAACATAGTAGTCCTC
GACGTCGAGGTAAGAATATGCTCCTAGAGCTATAGCTAGGATCGATATGG
CAAGGGTCGCCTTACGGGAATGCCCAGCCGTGCTTCGGCCGAATTGGTGT
GTCTGGTATTGCGATACTTGATTACTATGTCCTTCTCTGCTCACGCTTTC
ATCATGTTGCTGTTCTTCTGGCGCATGCTTATTACTACTTTGCTAACAAC
CGGAGTTCTCTGTGTACAAATCGTGCAGGTTTCTTGTTGATTGGTGTGGA
GTTCACAAGAGACGTACAGATCCAAATGGCAGGACAGCTGAACCGGCAGT
CGTCCAGGGAAACTCTCCCGTCGCTGCTCATCCAGGTTCCGTCGATGACC
ATAGCCGGCTTCGACTGCGTCGGCGACACCACCACCGCCTCCCTGTCCTT
GTACGAGCAGAACAAGGACACCGTCATTACCATCCCGGCTCCGGCCACCC
CGCCACCGGCTGCCGCCGTGCCCGCGTACGACGACACGCAGATACCCTAC
TCCCTTTCGCTCAGCATGCCGGCCTCGCCGTCAGGGTTCCGCTTCTCGCA
GTTCAGGACGGCGTCCGTGCGCCGCGACGAGGCGCGTGTGGCGCCCGCGG
AGACCAAGCCGGCCGGGCAGGCGGAGGTGCACTCCCCGCGGCTGCTGAAG
CAGACGCGGTTCCACTCGCAGCCCATCCTTCACGCGTCCCAGCTGCTGAA
CGAGGCGCCGCGCCGGGCCGACAGCACGCGCGACAAGCGGTTCGACCCGT
TCAAGACCTTCTCCGGCCGCCTCGAGCGCCAGCTCTCCAACCTGCGTGGC
CACCCCATCGACCTCGAGTCCCCCGAGTCCAAGATCTCCGAGGAGACCGA
CCAGGTTCCCGGCACCGACCGCTACTTCGACGCCCTGGAAGGCCCCGAGC
TCGACACTCTCAGGGTAATAAGCAATGAAACAGTGTGATCTGTCAGTGAC
TGGACGATCGTGCACGCACACGTTTTTGTCGCTGGAGGCTAAAAAGCTGT
TAATTAATCTGAACGTACGTCACGTGCAGGCGACGGAGGTGCCGGTGCTG
CCGAGTGACGAGAAGTGGCCCTTCCTTCTGCGGTTCCCGATCAGCGCCTT
CGGGATGGTCCTCGGCGTCAGCAGCCAGGCGATCCTGTGGAAGACCCTGG
CGTCGGCGCCCCCGACGGCGTTCCTGCACGTCAGCCCCGTGGTGGCCCAC
CTGCTGTGGTACATCTCGCTCGCGCTCATGGGGCTCGTCTCCTGCATCTA
CCTGCTCAAGGTCGTCTTCTACTTCGAGGCGGTCCGCCGCGAGTTCTACC
ACCCGATCCGCGCCAACTTCTTCTTCGCGCCCTGGATCGCCTGCCTCTTC
CTCGTGCAGGGCGCGCCGGTGGAGACGACCGAGGTGAACCACGGCGTCTG
GTACCTGCTCATGGCGCCCATCTTCTGCCTCGAGCTCAAGATCTACGGGC
AGTGGATGTCCGGCGGCCAGCGCCGGCTGTCGAAGGTGGCAAACCCGTCC
AACCACCTCTCCATCGTCGGCAACTTCGTCGGCGCGCTGCTCGGCGCCAA
GATGGGCCTCCGTGAGGGCCCCATCTTCTTCTTCGCCGTCGGGCTCGCCC
ACTACACTGTCCTCTTCGTCACGCTCTACCAGCGGCTGCCCACCAACGTC
ACGCTCCCCAAGGAGCTCCACCCGGTCTTCTTCCTCTTCGTCGCCGCGCC
AAGCGTCGCCTCCATGGCCTGGGCCAAGATCAACGGCAACTTCGACAACG
GCGCCCGGGTCGCCTACTTCATCGCGCTCTTCCTCTACATGTCACTGGTG
CGCTGCTTGTTCCCACGTGCTCACGTAAACTAGATATATACGAAGTGATT
TGTAGTGACTGATTTGTCTTCCGATTGGCGAGCAGGCTGTGCGGATCAAC
TTCTTCAGAGGATTCCGGTTCTCTCTGGCGTGGTGGGCGTACACGTTCCC
GATGACCGGCGCGTCGATCGCGACCATCACGTACGCCACGGAGGTGACTA
ACCTGCTGACGCGGACGCTTTCGATCGGGCTCTCCGGCATCGCCACCGTC
ACCGTGGCCGGCCTGCTGGTGACCACCATGTTCCACGCCTTCGTGCTCAG
GGACCTCTTCCCCAACGACGTCTCCATCGCCATCACCCGGAGGAAGCCCA
AGTTCAGCAAGATTCTTGCGCACTTCCGCTCCTCCAGCTCCGACATGAAG
GAGCTCGTGCTCTCCGTCTCCAAGTCATCCAACTCCGACTCCGACTCCAC
GGAAACTGACCCGTCAGTGACCAAAGGCAAAGCAGAGCCTTAGACGCCGC
GCGCTGCGCTCTGTCTTACGTATAGCTAGCTCCATAGCTGTACATAATAT
ACTTCTTTCGTTCTCTTGGACAAAATAGCTTCAAGAGCTGATTGGAAGCA
TGCAGCTGGTCGGTGTAATTACAGTGGTTGCACATACCTGACCAAGGCAC
GGCGATATCCTTGGAGCAAATTTTGCGGTGATGGGGGTATAATGTGAGGC
ACGTAGGTCGATCGATCAGTATGTAAATCTACGTAATATATATGTGTAAG
CTATGTGGATTTGGAACAAAGAATAAACCATGAATATTTTGTTTGTATCC
TTGATTCCATGGGCGAATCATTC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.