Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA042389

[Submit comment/correction]

Sequence	AA042389
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA042389
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGCGTTGGTGCCACAATTTTTCCTTTTGGACGTGAAGAATTGCGTCCCG TGTGTGTGTGGGTTTCTTATTCCCTTTCATTGCTTTTCTTTCAGGAGAGA GGAAGCTTTTTGTTTTATATTGATTAATTCCTTTTGTGATTAAAAATGTA TGTAGCAATTGCTCATTGCTTTTCGATTTGTATGTGATATTATTTGCCTT GGGTGATATTTTTTTTTTTTGGAAAGGAGCATATATTAATATCATAAAAT ACCAATAATTACACCTAGCCTCTGCAACAACGTATTCCCGCTACCGGCCA TACGGATGCACACAACCAAAAAAGAAAGAAGAATTACAAAAAAGAAAAGT CCCGCTACAGTGACTCATTCATTGAAACAGTAGTACTACTACCACCAAGA CAGCACCAGAAGTCCAGCTTCTCCAAAAACGACGTCTTCAAGAAGGGAAC AGTGCACAAACACCGTCATCGCCCGATCAAAGATCTTAGGTTTTTACCCT GAAAAAAGTTCACACTCTCAAAACAATGCCTTCAACAAGGCCATTACCAG GCACAACCAATTAAGGCCAGACCAAGGTAGGACCGTGAACCTTTCATGTG CAGTCGCTCCACTTTCATGTCACTGCTCCAAGTCACGAATCACCAAGCCA ATTCCTCATCACCACCCACACTCGAACCACCATTATCAATCTACAGATCT TGGTCTCCATGATATTCTTCGTCGGCACCATGGAACGAGAACATATGCCC CAAGATATTAACAGCCAACAAAGCTTCGAAGCGCACCCTCTGAAACCAAA CGGTCAGAGTAAAACATGGGTGCGCACGACCTAATCTCATTCGATCTAGC AATCTCTTGGCACGATCGCACTTATAGAGTTCGCCGGCGGAGCCTTCCAG AACACGACACAGGAACCAGATCAATGTAGACAAACATCAGGCAGATCTTC GCCTTGGCTTGAGAGGGATCAAGGACCGCCACCTTTATTAAAACCGAGGC AGCAACCCCCACGCCACCCACCAGCAACTAGCAGGATCCGCCGCACGAAG GAGAGACCACCCGGCTGACCACTCCGGCGGAGAAGAGGTCACCACCACCA TGACGGAAACAGATGCCCCAAGCTACTTCATGTCGCGAACATGGGCGGAA CCTAGGAGTCGGCGTAGATCGACGAGCGGACAACAGATCTGGGCCGAGAT CGAAACCCGACTCCCCCGCCGCCGCTTGCAACCATCTACCATCGGTCCTC CGGCCGCCGCCAGCCACGACACCGCTGTCGACCGGCCAGGAGCGGACGCC TCCGCCAATCCCCGCCGGAACGTAGGCGAGCTTACCGCCGCCGCCACACC ACCAGGGCTTTGCCCGACGACGATCCGGGCGGCGGCGGATGGGGGTTCGT GGGAGAGGGGCGGGGAAGGGAGGGTAGGGGGCCGCCTGGCGCAGCGCCGC CACGCCGGTGCGGGAGGAGGGTTGGGTCCGCCTTGGGTGACAATGTAGCC AGACATTCAGACATTCTTCTCTAGAGACGTTTGTCTTTTTAGATGTTCTT TTGAAAAATTATTTTTAGATCGTCCTACATATTTTAGTTGAAAGCTACAA AACTTTCCTATGTCCACAGTCCACAAACATGCTTGGTTTGAGTTGTCCTC CTTTATGCTTATTTTCGAACTAATTTGTAAAAATAAGTGACATAATTAGC TAAAACTAAGATATTTGATCGGTTGCGACGACTCTTCTGCACTGTTTTTT TCTTGGAGGCACCGCTTTTAGGAATTTGAACTCTGGGTGTTGTCTTGGTA GTGGTTTGTGGTGTAGCTACAAGAGATTTTGATTACAATAGCAAGATCTT TTATTTTTTTTCTTCTTTTTGTTGTAAGGTTTTGTGCATCCGTAATGTCT TTAAGACTTTTTATTGTTACATAGGCTAAATATAATTGGTATCACTGTGA TATTAACATTTTTCCTTCGTAAAAAAGTAGCTAAAAGTGGATCTAAAATA GGTAAAATATGGTTGGACAGCTAGGATTGCGATAATCCCACTTGTGCTAA ATGCAACCATAATCAAAGTCGGTAACAACAAGGATATTTGAGTAGTACAC ATGTGTGGACTGTATTTTTTACCCTCGGAATATTTGCTCAGTGGATTACA TGGGTCTATGGGCACCGAGGTAAATCTATAGGTCATGTTGTCTGAAGAAT TTCAGAAGTTAGCCACCCAATAGGGTGACCCATTTATCAAATTTATTTAC CTTTTGTTTTTGTTCCATTAGTATTCATGGGGAAATATCACTTCAATGAC ATATATGTAAAATATGTCTTAATACATATATGTCTTAATACATATTTTAC ATCTAAAGAAAATAATGCTCTATCTGTCTCGATAAATAGCATGGAACATT TAATTTTTTATATTCAAGAGTTCACACGAGTCACGAAAATGATCTCGTCG ATCAATTTTTTTATCATGCAACATTTATAACCTAGAATAATACCCATAAA AGCGTTCACAAATTTTAAAAGAATATTTCCATGAAATTCGAAGACGTGTT TCTATGTTCAAAACCTAAGTAACTTAATTAGGCGAACATTATTTGTCCAC TTTTCCTAATATATTAATGTGTGAGTAAAGATCCGCATTTAGGAAAACAA TATTTAATCATGAAAAAATATACATCGGCGAGCTAGTGGCAACCTCGTCC GGCGGATAAATGGCTCTTGACGGTGGATTGTTGTCTAGTGTTTTAGACAA ACATGACATGGTGTCATACTTGGGGTGATGGTGTCAAGTTTGTTTGGCTA GTGGGTGTCCTATTTTGTTCTTTTATGCTACTCGATTTCTATTCCGACTT TGTGAAGATGAAGCTACAATTTCATAGTAATCTTTGACGTGGTGTATCCC GTCCATATGTTCAAGTATCTAATATTTTTTACCTATTGGAGTCTTTAAAT GTTTTGATTAAAGTCTAGCATGTATAGATTCAGTCTTCTCTAGTTTTTTT TATTAGAGACATGGAGGAACATTGAGATGCAAACACTGAAGCTAGAGACA ACAAGTTCAAAGGATATTCTATTGCATGAAGTTCAAAGTAACTTGATTTA ACCTTTCTATTTTACAGGGTCTATATTTTTGTTTTGTTTACATATATTTA TTTTTGATGGATTGTTTAAGTATCATTTGTCTCATATAATTGTTTAGTAA AAAACATATTCCCGCCGTTTCCAGATATAAGATGCTTGAATTACCACATC GTCTTACATTAACAAACTGGGGTGCAGTAACATCTTATCATTAGTTTCAG ATATTCATATATGTTCAATTGACCAACCAGCAACATTGACATGATCAGAG AGATTGAATAGTATGTTGTAGTCTCTAGAAACCCCAAATGGGGCCAGAAC TCCATGGGAAAGAAATAATTGATTAGCACTAGCAATGGCGAGATCCGAGA GAGAGGAAAGAGTAGTTTTTTTTTGGAAAAGAGTATATATTAATATCACG GAGATAACAACACATTCCCTAGCAGCCTTACGGATGCACACAACCCAGAA AAAAAATTATTAAAAAAAGAAAAGGCCCGCTACAGAAAACTATTCCTCAA AGCAACGACACTGACACCATCAGAACAACACCAGTAGTCCTCCACTCCAA TAACAACGTCTTTAAGAAGGAAACAGTGAACACACGCCGTCATTGCCCGA CCAAAGATCATAGGTTTTCACCCTGGAGAAAGTCCTCGCTCGCAAAACAA TGCCTTCAACAAGGCTATTGTCAGGCACAACTAGTTAAGGCCAGACCTTA GATTTTCACCCTGCAAGATAAGACTGGGAACTCCTCCTATGTTGCCCCCA CACAAACAGTCGCTGCTATGAGTCATAGATGATGCAGCCAGTTCGTCGTC ACCACAAAGACTCAAATCACCATCGCTGCCCTCATGTTTCCGCTTTCCTG ACATTCTCCGCATCTGACTTCACCATGGCTCGATGAATGGCACTTGGTGG GAAAAAAACAGCAGAGCTTCGCAACGCTCCGGCTGAAACCAAACGACCAG AAAAACATTGGTACGCACGACCGAATACTTTCCGATCCAGTAACCTCTAG ACCTGATGCACCCATGGGAGTTCGCTAGCGGAGCCTTCCGGAACTCGACA CTCCAGCCAGATCAATGAGGGCAAGCATCAAGCAGATCTTCTTCTTCGCG CGGGAGGAACCCTGGGACCGCCTCCATTATTCGGGACGAACCAGCAGTCC CCACACCGCTAGCGTCTACCGGCAATCAGAACGAGCGGGTCAACCATTAG CCCTTGAGGCCATGGCCGAACCCAGAGATTGAGCCGACGCCGGGAGCAGC ATCATCGCAGGTCAGCCACCGCCTCCAGGTCCACACTAGATCTGCTTCTG CTCTTATGCGCCTTCCATCCGAGCCGCCATCCTGCATCCCTGGAGCGCCA CCGCCCGCAGCCCTGATCCACCGGCGTAGCCCCAAGTTGCCTACTCCCCG CGCGAAGGAGATCGACGGAGGCCGCGCAAACCGCCTGTCACCTTCGGGTG ACCAAGGCGTGGCCGCCACCGCCGACCGAGAAGAAGGCGCGACGGCAGCG GCCAGGGGGAGAGGGCTCGGCGACGGCCTGCTGGGGTTCAGAGGTGGGCG CCCCGAAGTCGCCTCACGCGAGCGACCCAGGGGCGGCGGCTAGGAAAGAG TAGGTTGTAGTCTCCCCTCTCTATCAGAGAAAACAAAAACGTTTGCTTAC CACCAACCGTTTACCATAGCTGCTGCATTGTGCATGTGTTTAAGTCACTG CTATCCACTTCCTATTCTTTTTGCACCACACGGCAACCACAAAAGATGTC GAAAGTGTACGCTTTATTGGCCCTGAACAATCCATGACATACTTTAATTT ATGAGCTGCAAAAAGAGACAGAAAAATACTTAGAGTTTAAAGGAGGTGAT TTCTTATATAGGCCAACACGTGCGTCCTTGCAAGAAGCTGTGTTGAACTG TCGTGTTGCTCATTAGCTGCCCTGGCACGGGACAAAGCTTAGAAAAGTAA TAGTAATACATTGGCGCCGATTTGACGAGAGAAAGAAATATCTTTTCCAA GAGAATGCATATCAATCATGTTCACTGTACGAAAGCCGTCATACTTAATG TTTGGTACCACTAACTACTTAAGTGTGTGGTATGGCAGCCCACTCATTAC GAGAGTGCTCATTGAGGTACCCTTTTCCAAAATAAAACCTTAATAGTAGG TGTTTTGGCTTCCATGTGCAAATGAACCTAGAAAAATACATGAAAAACAA GTTTTAAAATGTCAGGAAATTCTGAAATAATTTTTTCACTACAGGACTGG GAAGCTACGCCGACGGCCGGTCGCTACGCCGACGGCCCAACGTCGGGGCC GTCGGCGTAGCCATCGTTCAGGCCAGCCCCGCCAAGCAGCCGTCGGCGTA AAATTGCCCTCGGCATGTTCTATGCTACGCCGACGACTGCCCTCGGCGTA GCATGCGCCGACGGCTGCCCTCGGCGTAGCTATTTTTTATTTTATCTCAT TAAACTTTGAAAAATCATAACTAAATGATTCTAATTCGGAAAAATACAAA TAATATATCAAAATTTGCAGAAAAATAAGACCTATCTATCTACACTTAAA TATTACACATTTATAAATAAAAATTAAGTAAAATATAAAACATTATATAT AGTTTAAAACGGGCATAAAAAATTCAAAAACGATCGAAACAATGCGAAAC CTTCGCGTGGTGTTATATTATGTGACATAGTTAGAAGGAAAAATATTAAA CTTGGTATATTAATTATGTCTCAAAGAAACCTTCACAAAATGAACTATCT TATTCGAGGTTTCTTGGCTTTCGGGTCAAATGACCAATGTTATGGCTAGA ATCAAGACATAGTTTGTGATAATGTGCCCATATTGTACATACACATGCAT CATGGGATGGCGAACAATGTTGCAGGAGGAAGTTTTACTTTTCGTCGCAC CAAAAAGCCATTTCCCATTTTCCGAGCATAAAAAACGGACGGTTTTGTGA AGCAACCACCAAATGGCTAATTCAAAATACTACCACCACATTTTACAAAA ATACTATACCACCTTATATGGACAATGTCCCAACAGGGGAATCCGAAACC TTTCCGTCCACCTTTTGTGAAAAAGACAAATTCCTGCCGAATCGGCAGGA AGTGGGTCAGATATGAACTACAGGTACATGATCCGATGCTCATGTTTTTT TACAAAAATCATTTTTAGGTTCACAATATGTTATTTTATCAAAGATCTAA TGAAAGTTTAGCGAGGCTCGGCCCCGAGCTAATAATCTTTATGTCCGCCG TTCGACAAAGTTTAACGATAGTTTAAAACGGGCATAAAAAATTGAAAAAT GATCGAAACAATGCGAAACCTTCGCGTGGTGTCATATTATGTGACAGATT TATAAGGAAGAATAGCAAACTTGATATATTGACTATGTCTCAAAAAACCC TTCACAAAATGACCTATCTCATTCGAGGTTTCTTGGCTTTCGGGTCAAAT GACCAATGTTATGGCTAGAATCAAGGCATAGTTTGCGATAATGTGCCGAG GGCATTTTGGCCTACGCCGACGGCCTTTTGCCCTCGGCGTAGCGCGCGTG TCCCGTAGTGTTTTCTTGTACATAGTTTTTTGGAAAAATGTAACATTTTA TGTGATTCGTATAAAAAGAAAAAATGTCCCTGAATAGTCATGTTGGATCA TCCAAAGTTATCTTTTTAAATGGGACAAGAATTTCTTTTCTCTCTCGAAA ACCTATGTGCAAACATAGGATATCCGGATGTATATGCAAAAAAAAAATTA TAAAAAAATGAAATATATTTTTAGACAATAGGTTCATATACACTCGTGAG CCAAATTTGAATTTTACTTAAAATAGTGACATACTGTCTACGATCCAGGA TTGTCTAAAATACCTAATTTTAGCATTTTGATCTGCTAACCTGAAGCTTC ATGTTTCAGGGTTGCTCACTTTTGGGATTGTCGGTACTATTTGAGAAGTA TTTAACTTGCTACGATTATTATAGAGATCCATAATATATCATCGTCGCTC ACTTTCTCATCTATAAGTAGAATCTGACGACATGAGCAGTGAACACAGCC ACCTCTCCACATTCATCTGTCCTTAGCTGCTAAGATTACACTTTTACACA CCGATCTCATCTGCAGCTAGGGAAGGGAGACACATGGCTAAGCTTGCCAT TCTCATCTCGTGCGCCTTGCTCCTAGCCGCGGTGTGCCAAGGCCTCCAGG TGGGCTACTACCAGAAGACGTGCCCCAGTGCGGAGGCCCTCGTCCGTGCC CAGGTGAAGAAGGCCGTCCGCGCCGACGCCGGCTCCGGCGCCGGCCTCAT CCGCATGCTCTTCCACGACTGTTTCGTCGAGGGCTGCGACGCCTCCGTCC TGCTCGACCCGACGACGGCGAACCCGCAGCCCGAGAAGCTCGGCGCACCG AACAACCCGAGCCTGCGGGGCTACGAGGTGATCGACGCCGCCAAGGGCGC CGTTGAGCGCGCCTGCTCCGGCGTCGTCTCCTGCGCTGACATCGTCGCCT TCGCCGCCCGCGACGCGTCCTACCTCCTCAGCGACGCCAGGGTCAGCTTT CATGTCCCCGCGGGCCGGCTCGACGGTCGCAGGTCTGTCGCCAACGACAC GCTCCTGTTCCTGCCCGGCCCGTCCTCCAACCTGTCCACCCTCGTGTCCG GCTTCGCCGCCAAGGGGATGTCCACCGAGGACATGGTCGTGCTCTCCGGC GCGCACTCCATCGGGCGGTCACACTGCTCCTCCTTCGTCCAGGACCGTCT CGCCTCCCAGTCCGACATCAGTGTGCCTCTCGCCAGCCTCCTGCGGCGGC GGTGCCCGGCTAGCCCGACCACGGGAAACGACCCGACGGTCGTGCAGGAC TTCGTGACGCCCAGGAAGCTGGACAACCAGTTCTACCGGAACGTGCTGGC GCGCAGGGTGCTATTCACGTCGGACGCCGCGCTGCTGACAGCGCCGGCCA TTGGGAAGATGGTGCGGGCCAACGCCAGGTTCCCGGCGTCGTGGGAGAAG AAGTTCGCGAGAGCGATGGTCAAGATGGCCGCCATCGATGTCAAGGGCCG CGGCGTCGGAGAGGTCAGGAAGAACTGCCGCTTCGTCAACTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.