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GrainGenes Sequence Report: AA007002

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Sequence
AA007002
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA007002
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GCCGATCTCATCTCTCTCTCGCTCTCGGTTCCTCTTCGCCGGGTGGAGGC
GCCCGGAACCCCTCGGGACGGCGGTTGCTCGCCGGAGAAGAGAGCCTCAC
AAATTCCACCACCGCTCTCTGGCCTTCACTCCGTCCATGGCGGCGACGAA
CGCCGGCGTCAGCAGGACCAGCGCGTCAGCAGCAGCAGCAACGAGTCCGG
ATTCTTCCTTTCGTGCGACATCAGCCTCCCCCACACCTTCTGCATTCTCC
AGGGTTCCGTCCCGCAGCTCAAGGTGACCATTCCCCTTCCCTTCCCTTCC
TTTCCCCCAAACATCTCCTGCGCTCTCTTCTGAATGATGCTTAGAACTGT
TCAGAGATATAGCAGGATTCGTGCTCTGAAAACGTTGAGTAGACTAATAT
TTAACTGAGCACGATTTCTTCTGCCTTCAGATCTCGTTCCAAAATACTAG
TCATTACCGATTCAACGTGGTTATATTCGCAATCAAATTTACTCCGATTT
CCCCGTTCAGGAATCTGGAGTGAGTTTCTATGCACCAACCCCTGCAGAAG
AGGCTGTTACTGTGTGAGACCCTGAAATGGGACGAACCATCTGATCACTA
GCAGTTAAAAGTTTCTTGGAGCTTGGCTCGTGGAATGATTAATTCAGATA
TGAAACCAAGCTCAAATGACCAGAAGTAAGCTGCAAACGAATGACATACT
TTGTGCTTTTTGAGTAGGTCACTTGAAATAATCATCAAACTCCTATACAG
GTGCAGGTGCAGGAGAAGAAAGCTCTTACAAAGTTCATCCGCTTGGTGGT
GTACAGGGGTGATACCCAAAGTTAGGAATAGGGTGGCAGAACATTTAGCA
ATAGAGTGGCAGACATGATTCTAGTTTATTTCTGCATTTCATACATGATT
CCTAGTTTATTTATACATTTCATACTTCAATATTCTCTCATAATTAATTA
TACAGTATTTAGCAGTAAAGTTAAATTATTAAGAACAAGCATGCATAGTA
GCTCATTCTGTACATGGACACAGGCCAAATTAATAATGGTGCTCTGCTGG
CTTGAAGAAGTGTTATGGGCCTTAGGCTTGGCTTCCATTTTCCTCACAAG
CAAAGCAAGTGAGTCTTGTTCACACCATTCTGCACCGCCCCTGTGCTCTA
ATGGCAGAGGTGGACGCCACTCAAAATCTGCTTGATGGGCCCATATGTCA
GTAGAACAATAAAGCCCTCCAATTCCATGACCCCATCTATCCATCTTCCT
TCCTCTTTTCCAAAGAAGAGCATCCTCTTTTCTTTTCCAAAGAAGAAGTT
CCTTCCCCACAGGACACACTGCATAGTCTTCTTTTCTTTTCTTTTCCAGA
GAACAAATTCCTTCCCCACAAGGCACACAGCACGTCTCCCCTGAAATTCC
CCATGGTTCCATCCAGCTCCTGACTCCCGAGTCCTTATCTCCACCCATCC
GCAAGCTTCGTTGCTTCGAGATATCCCAGATACGTCACAGCTCCCAAGCT
CACCCATTTGCATCTGCCCCGCCTCAGTTTCACCGCCTCCTCCTGCATCT
CGTCGCCTTCGCCAGTCAGGCTCTGGGGCTTCTGCTGCTGTTGCTATAAC
ACCGGGGCTGCTTGCATTCCACGTGCCGGTGAGTACCACGTCGCACTCGC
CGTTGCTGTGTCCGGGAAGCTGCTGTGCTGACCAGGTAATTTATGGTCAC
AAGATTTGATTAACTCGTCAAGCCATTGAACAACTCAAATAGTAGTTTAA
ATTTTGGCTGCAGAGTCTCCAGTTGTTCGATAGTGATCTTAATTATTCCA
CTCTAGATTTAGAACTGAACTGATAAACATATACACTAACTAAAGTTCAT
ATGTTTATTTCATTTCGAATTTTAACCCATCTTGATCTTAGGTTATGTTC
CATAGCAAATCAAGTTTTCTGGTCAACAAGTTTATAGTCTATCATTTTAG
CCAGTATTAATCGATAAATAAACCTATATTTAAATTCATATAAAAAATCT
TATTTCGAATTTGTTAAATTAGAGTTTAATTTTTAGTTAATTATCACACA
CCAATGAAGATTGGATCAACAATCAACCTAGCCGGACATGCGTGTATGAC
CTGAACTGTTGGTTGGACTAAGTCATGTAAGTCAAACTATATTCAGGTTT
ATAGAAATATTGATTCCTAACACGGTAGCTTTGGATGCAGCTGCAATATT
GTGCTTTTTGTTGCTGTCCCGGTTAGGCTCCCGGGCCGCTGCTCGCCGCT
GCTCCTCGGTGCTCAGGAGAGAACTTTGTACGGTAACGATCAAAGTCTGT
ATCTTTGCACGCCTTCGCTCACACCAATAGTTTCTACTATTGACTGGAAA
GATGGGATTACTTAGCCCAGACACACACATATCAGTCTAGTACCACAGTA
CTGCTGACTGGCCAGCTAGCTAGCTCAAAAACTCATGTCACTCACCAGCA
GGAGCTTTTATCTAGAATCAAAATACCAGAGAGACATGCTCATGTATCCA
TCGCGGCTTTCGCCCTTGACTTTCACAAGTTAAACCATGTGTGTACCCAA
AAAAAAAAATGACAAGGACACTTGTATTAATCTACCTACTGGAGTAGCTA
GCCATTCTAAATACATGGCCGCCCCGTACAATGTCACTTGGAGATCGATA
AATTAGAAGTTAATTCGACCAAGGCGAGCTTATTTACCGCAATCATTAGA
GAACATTTCATTTCATCATAGTACAGTTTCTATAAAAATGTTTTCATTGT
AAAAAACTATATATAGGATTATAGAAATAGTGATTGTTAATATGGTAACT
TTGGCTGCAGCTGCAAGCTTGCTAGGCTCCCAGGCTGCTGCAACGCCAGA
GCTGCCGTCCACGTGCTGGTGAAGACCTAGGTGCGTTGCTGGACCTGGGT
GCTCAGGGTCAAGCTCCTGAAGGTAACTATGGCTGCAAGACTAGATTTTG
AACTGCGATTGGTTCAAGAACAGATCTCGGCCTGTATATGTACACGGCTT
AGCTCATGTCATTCTCTTATCCATTGATTCTGCAGTGAACCTGTGTTCTT
CCGCGTGTGCTGTGCTGTGGTAGTTCCCCCCTTGACGAGCGTCGCAATGG
CGGAGATTGTGGTCTCCATGGCAATTGGGCCGCTGGTGTCCATGTTGAGG
GACAAGGCGTCCAGCTATCTCCTGGACCAGTACAACGTGATGGAGGGAAT
GGAGGAGCAGCACAGGACTCTCAAGCGCAAGCTTCCGGCCATCCTCGACG
TCATCACCGATGCCGAGGAGCAGGCCACGGCTCACAGGGAAGGGGCCAAA
GCATGGCTCCAGGAGCTCAAGAAGGTCGCCTATCAGGCAAATGAAGTCTT
CGATGAGTTCAAGTACGAAGCACTCCGACGTGAAGCTAGGAAGAATGGGC
ACTACCATCAGCTTGGCTTCAATGCGATTAAACTCTTCCCTACTCACAAC
CGTGTTGAGTTCCGTCACAGAATGGGTAGCAAGCTTTGCAGGATTCTCCA
GGACATTGAGGTCCTCCTAGTAGAGATGCAGGTCTTTGGGTTCAAGTACC
GACCACCACCTCCAATGTCTAAGCAGTGGAGGCAGACAGATTATATCATC
ATTGATCCACAAGAAATTGCCAGGAGATCCAGAGATAGAGAGATAAAAAA
TATTGTTGATATACTACTTGGTCGAGCTAGCAAGGCAGATCTTGCCGTTG
TTCCCATCGTTGGAATGGGGGGCCTTGGCAAGACCACATTAGCGCAGCTC
ATATACAATGAGCCTCAAATTCAGAAGCATTTCCAGTTGCTGCTCTGGAT
TTGTGTCTCCGATACCTTTGATGTGAACTTCCTGGCTAAGAGTATAGTTG
AAGCATCTCCCAAGAAGAATGAAGATACAGACAAACCACCACTGGATAGA
CTTCAGAAACTGGTCAGCGGGCAGAGGTATCTCCTTGTATTAGATGATGT
CTGGAACAGAGAGGTCCATAAGTGGGAACGGCTGAAGGTCTGTCTTCAAC
ATGGTGGCAGCGGTAGTGTTGTGTTGACAACAACTCGTGATAACCGAGTT
GCTGAAATTATGGGTACAGATAAACCCTATCCCCTCAAGAATTTGGAGGA
TAGCTTCTTAAAGGAAATTATCGAGGTTAAAGCATTTGGTTTGCAGGAAA
AACAACCCGCCAAGCTAGTCGAGATGGTTGGTGAGATTGCGGAGAGATGT
TCTGGCTCTCCTTTAGCTGCGACTGCACTGGGTTCTATACTAAGGACCAA
GACCAGCGTGAAAGAATGGAAGGCTGTATTATCTAGAACTAGCATTTGCA
CTGAGGAAACTGACATTCTGCCAATACTAAAGCTTAGCTACAGCGACTTG
CCATCACATATGAAGCAGTGTTTTGCATTCTGTGCTTTATTTCCTAAGGA
TTACAAGATTGATGTGGACAAGCTGATCCAACTATGGATCGCAAATGGCC
TTATCCCAGAACACAAGGAAGATAGTCTTGAAACCATTGGAAAACAAATT
TTCAGTGAGCTGGCCTCAAGGTCATTCTTTATGGATAAAGAGGAGTCCAA
AGACGATAACTATTATTCCAGAACTACATGGAAAATCCATGATCTTATGC
ATGATATTGCAATGTTTGTTATGGAAAAGGAATGTGTTGTTGCAAATAAA
AAACCAAGTGACACTGAATGGTTTCCAGATACCGCTCGACATTTGTTTTT
GTCATCTGAAGTAACAGAAGGTATACTGAATGATTCTATGGAGAAAAGAT
CCCCTGCTATCCAAACACTGCTACTGTTTAGATCTATGGAAAGACCATTG
AAGCATCTATCAAAATACAACTCTTTACGTGCCTTGAAGCTTCATACATG
GGGAGAATCATTTCTAATGAAACCAAAGTATCTGCATCATCTGAGGTACC
TTGATCTCTCAAATAGTTTTATCGAAGCACTTCCTGAAGATATAACTATT
CTATATAACCTGGAAATGTTGGACCTTTCGTACTGCTCTTTTCTCCATCA
ACTTCCAACGCAAATGAAGTATATGACTTCCCTTCGTCACCTCTACACTC
ATGAATGTGAGAACTTGAAGAGCATGCCTCCAGAACTTGGAAAGCTCACT
AAGCTGCAGACACTTACATGTTTTGTAGCAGCACATAGTGGCCCTAATTG
CAGTGATGTTGCAGAGCTGAAGCATCTAAACCTTGGTGGTCATCTAGAGC
TATGTCAGGTGGAGAATATTGATGTAGAAGCAGATGCAAAAATGGCAAAT
CTTGGAAACAAAAATGATCTCAAAGAACTAAGATTAAGATGGACTTCTGT
TTGTGACAGCGAGGTGCTCAACAATTTCAAACCTCATGATGGGCTGGAGG
TTCTGAGGATATATTCCTATGGAGGAAAGTGCATGGGTATGTTGCAGAAC
ATGGTTGAGATCCATCTTTTTCATTGTGAAAGATTGCAAGTTTTGTTTAG
ATGCGGTACATCCTTCACTTTTCCAAAACTGAAGCAGCTTACACTGGAAC
ATTTGTTGGATTTTGAGAGATGGTGGGAAATAAATGAGAGGCAGGAAGGA
CAAATAATCTTTCCAATGCTTGAGAAGTTGTTTATTAGGTATTGTAGAAA
GCTGGTGGCATTACCTGAAGCACCATTGCTTGAACAACCATATACTGGTG
GTTATCGCTCAGCATTTCCTGCCCTAAAGGTACTCGAAATGGAAGAGTTG
GAGAATTTTCTGAAGTGGGATGCTGCACTCCAAGGAGAAGAGATATTGTT
TCCTCAGCTTGAGAAACTAGTAATTCAGAAATGCCCAAAGCTGATGTCAT
TACCTGAAGCACCATCGCTTGAACAACCATGTAATGGAGGTTATCGCTCA
ACATTTCCTGCCCTAAAGGTACTCGAATTGGAAGAGTTGGAGAGTTTTCA
GAAATGGGATGGTGCAGCCCGAAGAGAAGAGATATTGTTTCCTCAGCTTG
AGAAACTATCAATTAAGAAATGCCCAAAGCTGATGGATCTACCGGAAGCA
CCAAAACTCAGTGTATTAGAAATTAAAGATGGCAAGCAGGAGCTCTTCCA
TTGGGTAGAAAGATATTTGTCTTCACTGACCGAGCTGACACTGAAGCTAC
AAAACACAGAAACGGCATCAGGATCTGTGTGCACTTCAGTTGTAACGGTG
GACAGCAGGGAGAAATGGAACCAGAAATCCCCTCTTACAGTTTTGGAGTT
TGAATGCTGCAATTTATTCTTTGGATCAGGTGGACTAGAGCCGTGGGACT
ATTTTGTACATCTTGGAGTTCTAAGAATTGATAGATGTGATGTGCTCATT
CACTGGCCAGAGGTGGTGTTCAATAGCTTGGTATCCTTGAAGACATTAGA
GATCAAATGGTGCAATCATCTGACTGGATACACACAAGGTCATGTCCAGC
CATCAGCATCCGAAAGGAGTCAGCACCTACCAGCTCTGGAGTATCTTCGT
TTAGAAGAGTGCGGAAGTTTGGTAGAGATGTTCAATGTCCCAGCATCTCT
CAAGAGCATGGATATTTGGCAGTGCAGAAAGCTCGAGTCTATATTCGGCA
AGCAGCAGCTGGGCACGTCAGAGTTGGTTCAAGGGTCTTCCTGCAGTGAG
ACAGTCATGCCCACAGCTGTATCACAGCTGTCACCATCACCCGTGAATCA
CTTTTGCCCATGCCTAGAATCTCTGTGGTTAAGTGATTGTGATAGTTTAT
CAGGGGTTCTACATCTTCCACCGTCCTTAAAGGACATAACTATTTGGGAC
TGCAGTAGTATTCAAGTCCTGTCATGCCAGCTGGATGGGCTCCCAAAACC
AGAGGTCACTGCTTCCATAAATGCACCGGACCCATCAGTAGCAACAGCAG
CAGGAGAGCATTCACTTCCTCCTTGTCTCACATCTTTATATATACGGTCC
TGTGCTGGCATGTTGGGTGGAATCCGTCTGCCCACTTCCCTCAAGACACT
GAGCATTAAAGACAACAGTGGGCTGACATCTCTGGAGCCTGTGTCGGGCC
CACCTCCCCTATCGTTGAAACACCTTTGCCTTGAAAGCTGCAGTACCCTG
GCATCCCTACCCAACGAGCCACAAGCATACGGGTCTCTCCAACTGCTTGA
AATTAAGGATTGTCCTGCTATAAAGAAACTCCCTAGATGCCTACAGCTGC
GACTGGGCAGCATCGATGAAAAAGATCTAGATGCCCAGTACGAAGGTATG
CGCATATGTCTTTCTCTCTTTGCCAAATTTCAGCAATAAATGCAAGCATC
CATCCCATCCCATCCCATCCCATGTACCACTGCCAACAAGCCATCTCCCA
TTAGCATTAGCATTATATTGTTTGAAGAAGAGAAATAGCAATCTGATACT
CCCTCCGTGTCAAACTATAGGACGTTCCGGTGGTTTATTTTGCATTGATG
GAACGTCTTATAATCTAGAACTGAGGCTGTATATATGAAATTTGTTAAAA
CTCAATTATGATATCTGATTGTATCTCTCTGTAACTTAAAAGAAGAATTG
TATCATAATTTAATTTGATTTCCTACCTGCCTGCAAATTATCATTTTTTT
GTACCAAATTTAATATATATGTGTGTCTACCTATCTTGCATGCATGGATG
TTTTCTGTTTCTTGAAGATTGTTTAACCAACGGACATGCAGAATTTGTTA
AAACTCAATGACGTCAACTGATCTGTATCTTGCTGTAACTTGAAGATTGT
TTTTTACATCATTTTGCTCACTACGTGTCCCTGTCCATCTCCAAAGCAAA
ACCAGTTTGATAGCACATGTTTTAGAAAAAGAACACATAGCAAGTTACGA
AAAATGGACTTGCCAGTAGATGTGTTACACGGGGTGTTTGTTTTTAGCCT
AAATTCTCCATCTTTCTTAATGCCGTGTGGTATTAGTTTGTACCACTTAG
TCTGACATCACCTGTGATATAATACAGTAATGGCATTTAAACCGAAGACA
TGGAAGGAGATACCAAGACTGGTCCGTGAGCGGAGGAGGTATGCCAAGCG
GAGGGCCGAGCTGATGAGGCAGGCCAACCGCACAATTGGAGAGCAGGAAG
CTGAATACCGTTGCCTAGTTAACCGAGGAAAACCGGGCGAGAATTTATTA
GAACCTGGGGTTCTCGCATGTGTGAGCTATCTCGTTTGAGCATTGTTTAC
TTAGGCTAGACATTGGCCTGTAACTTCTTTAGATTACTTTTCAGTTGGCG
AAATCTCAGGTTTGTGAACATTTGTTGGTCCTGCTTGATATGAGAACTGA
AGTGTCGGTGATGTGATGCCAGGAGCTCCATTTGCAGCTGATTTGCGTAA
TGAACCTGCTTCCTTTACTTGGTTCAGAGATTGACCTTTTAGCTTCTTCA
TCAGGTAGCCGTGTAAGCTGTGAACTTGCCTGATTCAGTACTTCTCCAAA
TTAACTACAAGCTAGGCAAATCTCAGGTGTAAGAACATCTTTTGTCCAGT
TTGACATGAGAAGTGAAGGTGTTCAGCGTGACAAGGTTGTTCAGGCAGAA
CTCCTTGAGTTCAAGACAAGAAGCTCCTTGGGCTCCTCTATCGGGTATCC
AGAACTTCAGGCACGACTGATTAGCTGGGCGTCCAAGTTCGGCTAG

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