Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA044643

[Submit comment/correction]

Sequence	AA044643
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA044643
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTGTCTGTCCCCCGAGCTTTCCCTCATTCGTGCGCCCTCGATCCCCTTCT CTCCTCCCTCCTCCCTCTTCTCTCCCTAGGGTTTCTCCGCGCCCCAACGA CACCGACTAGCAATCCCGCAGGTTCTCCCTCTCCTTCACCCATAGCTCTG CTGGTCTAGACGACGACGCTGCTAGAGCTCGTCCATCCGCTTGTTTTTTT CGTTGTGTGGATCTCTCGGAGTCCCAGAACTGCTGCTGATTTGGTTTTGT CCCCTGTGCAGATCGCCGGCTTCGCTTCGTGAACTATGGCGGAGGAAGCG GCTGCCGGTGTAAGCATCCAGAATTAGCAATTTCCCCTTCGTTTATTTGA CTTTCAGGCTTTGTCGTCCCAGCTAGCTTCTGTGTATGGTATGGATGGTC AGCGGTGCTAACTGACGGTCCTCTTTTTGTGCTTGGTGTCTCCGTTCCGG CAGCAGGTAAAGAAGGAGGAGGAGGAGTTCAGCACGGGGCCTCTGTCCGT GCTCATGTTGAGCGTCAAGAACAACACTCAGGTTGGTGAAATCTATTTGC TTGTACTGAGACACCCAGGCTGGAATTTCCTTTCTACTGTGTCTGTTTCT GTCGTGTGTACACTGGCTAAAAACCCTATTGACCTAGTTGATGTGCAAGT GAACCGTAGTTTCATGAATTTTCCTCTGGTAATAATGATGTGCTATATGT CCTGAAAAGTTAAATGCATCAGCCCATCATATTATGAGTAATTCAGCATA CATTTTATGCAGCATTTGTCTGTCCTATTGTTGCATATCTAACCCCCTTT TATTAACTGAAAGTCTGAAACAAATGCAACACAGTAATCTCAAAGTTGTC TTTGTATTTTTGTTTGCCTGTGTTTTTACTGTATGTCGGCATCTCTATTT GAATTGAACCCTGTCAGATTTCAGGGGTTCTCTTCGTGTGTACAGCAGCT GACAATCCAGTTAACTTAGTTGCCTGTTATCCTGATATGCAAGTGGACCG TTGCTTTGTGACCTGCCTTTTCGTAATAATGTTGTGCCCTTTGTCTTGTA AAGTTGAATGCACCGGCGCTTAATTTTGAAGTAATCTCCGCACCATTTTT CCTAGTGTTTTTGTTGGATGCCAGGCCCTTTGTATGACTGAAACAAATGC AACTCTGTCGGTTGATGATATGGCTGTCGGTTGGTTGGTTAACAACCCAG TTAATTGGTTACCTGTTATCCTGATGTCCAAGTGAACCGTAGCTTTGTGG CCTGCCTTTCGTAATAATGACGTGCCCTTTGTCCTGCGAAGTTGAATGTA CCGGTGCACCATTCGTCCCAGTGTTATTGTTGAAGTAAACGTCATAGTTT GTGTGCACCATTCGTCCTAGTGTTATCGTCAAGGTTCAAAAAGGCTCTGG GTGTTCATTGTGCGTTCAGATTCAGACACTGTATAAACATGCCATCAGGA GCAGTTTTTTTGAATATATTAGAAGAAGAAAGGCAAAGGAATGGTGATGT CTACAAACGTGGCCATCAGGCCTACAAAGAAGAGGAGAAATGCACTCAAC TACAACCCACAGTAGAACTGAAAAAAGCAGCCTAAAAAAAAACTCAATGC ACACAACCAGAACATCGAAGAAACTAACAAGCCGACAGAGAGAAGCGTCT GGAGCTGACCAAAACCCACTGCTTGGATTCAGATTTAATTTGCTCAATGA GGATCTGAATTGGCTTGAAAGAATCTCAAAGACGCGTGCATTTCTTTCCC TCCAAATCGATCAAGATATTAGCATTACTAGTGAGTCAAACCTGGATCTA TGAGTACCCTGCACTCTCTTTCTTGCATTTTTCCACCATTTTCTAAGCAT GCTGGTGGTTGTAGGTGCGACCTGCTGGAGGCCAGTACAGTTCAAAACAG TTCCCCAGATAATATTGACAATCATACAACCGATGTTAGTCTCGTTAGTT CACAGGTAGTGTGTGGGAAGGTGGTTTTGTTTGTGGCTGCCAAAAGCTTC TTCTTGCAGCCTGTATTACATTGTGGCATATATATATATAGGAGTACAAG AGCAGGTCGGTTTACTCCTGAGAGTTCTAGAGCTTTCTACTGCTATCTAG CTTACTGCCTAAGATTTACACACCTAAAGCTGCTTCTAGAACCTACCCAG TAGTACTACCAATACTGTACTACTAAAACCTACCAGAGTACTAGTCCTAG AACCTACTAGTAGTAGCTTAACTCCTAAGCAAGGATTACTCTCACAATTC TCCCCCTAATCCTTGCTCTTCATGTTTGACTTGATTTGGACCATTCTAAT TCTAGCACGCAGCTCCTGAAACTTTACTCGCCCAAGTGATTTTGTCAAAA TGTCAGCGAGCTGATCTGAAGTATTGATAAAGTTGGCGCTGATGCTTCCA TCTTCCAAGCAGCCTCTGATGAAGTGATACCGAATATCGATATGTTTGCT GCGCTCATGGAAGACTGGATTGGCTAATGCCAGGGCAGACTTGCTGTCCA CCATTAGCTCAACTGTCTCGGCTTTTCTTCCAAGAAGTTCTCCAAGCAGT CGAGCCAGCCAAATTCCTTGAGTTGCTGCAGTTGTGGCTGCAACATACTC AGCCTCACAGGAAGATTGAGCAACCACCCTCTGCTTGAGGGATTGCCAAC TCACCAAGTTGTTGCCGAGGAAGAATAGAGTGCCGCTCGTGCTCTTCCTG GTGTCGATGTCGCCGGCTAGGTCACTGTCACTGTAACCAATCAGCCATGC CTCCTTTGTCTTCCGCAAGTAGTGAAGACCATAGTGTGTCGTGCCAACGA CATAGCGAAGAATTCTCTTCACAGCCATCATGTGCTCCTCCGTGGGTTGT TCCATGAATCGACTGACGAAGCCAACAGCAAATGCCAGGTCTGGCCTGGT GTGGACAAGGTAGCGGAGGCTGTCAACGATCTGTCGGTACTTCGTAGCGT CCACCTCTTTTGCTGTACTTTCACGACTAAGCTTGAGCCGCTCCTCTATT GGGGTGTGTGCTGGATTACATCCTTCCATTCCTCCCAACTGAAGAATGCG CGATGCATAGTGTGCTTGACATAGAGCTGATGCCATCGCCCTGCTGCTGG ACTTCAATTCCGAGATAGAATGACAACAATCCTAGGTCATCTGGAATTTC GTCTTCATCTCATCCTTGAATCTCTCAATTGCTCCCTTGGATGAACCTGT GATGATTAGATCATCCACATATACTCCAATGAGCAAGATTTCATCGCCGG TGATGTGCCGGTAGATTGCGTGCTCGTGCTCGCTCTGCTTGAAGACCATT TCTTTGAGCGTGCAGTCGAGCTTCGCGTTCCATGCTCGTGGCGCCTGCCG CAGGCCATATAGGGCCTTGCGCAGCCACAGAACCTTTCCTTCTTCTCCCT TGATGACGAAACCCGGTGGCTGCTTCACATAGACCTCCTCCTTCAGTTCT CCATTGAGAAAGACTGATTTTACGTCCATGTGGTGGACATGCCACCCCTC CTGGGCAGCAAGAGCAAGAAGCAACCTGATTGATTCCATGCGACAACCGG AGCAAAGACTTCATCAAAATCTACGCCAGCTTGCTGGACGAAGCCGCGGG CAACCAGCCGCGCTTTGTGTTTGATTACTTCGCCGGCTTCGTTTTTCTTC AGCTTATAGACCCATTTCAGGCCTATTGGTCGATGCCCGTCTGGTAGATC GACGAGCTCCCATGTCTTGTTCCGCTCCACAGCTTTGATTTCCTTGCGCA TGGCTGCCTGCCATGCCTTGTCCTGCTTAGCCTCTGCAAATGAGCACGGC TCCCCTGTGCCGGCCAAATGTAGCTCAGAGTCGAGGTTGCGCGGTGCGAG CCCTGGGACTGGTTCTTCTCCAATAAGATCTTCAACCTTGCGATAGCGGA CTGGTGTGTCGCCATGTGCAGCGTCGAGTCGATCATCGTCATCCGCTAGT GGCGTGACGAATGCCGGAGTTGCTAGGGTTGCAGCAGTTGCTGCTGGTGT AGATTGAGAAGATGGTGGTGTGCTGGCTGACGTACCTTGAGCCCCATGTC TCGACGATGCAGATCTGTCCTCTCCTGAACTATGCGCGTGGCTAGGCGCC CTCATGGCAGGACGGCTGATGTACTCTACGTCAAAGTTGCTGCTAGAGTA TTCGCTGCCGCCCGCTGCCCAATCCCAGCTACGCTCTTCATCGAAGATAA CGTCACGGGCGATGCGAACACGTCTTGTCGCTGGGTCCAGCAGCCTGTAC CCTTTTACTCCTTCCTCGTAGCCAATGAAAACAGTGGGAGAGCTGCGTCG AGCTTGTGTAGGTTCCCCTGTTCCTTGACATATGCTAAGCACCCAAAGGT GCAAAGGTAGTGGACAGCCGGCTTGCGGCCATGCCATGCCTCATAAGGTG TCTTCCCAGTGAGAGATTTGGTTGGAGCTCGGTTCAGCAAGAAGACAGCA GCGCTCACCGCCTCCCCCCAAAATTCAGCCAGCATACTCCTTTGTTTCAG CAGAGCACGCGCCATTGCCACCACCGTTTGGTTCCGCCTCTCAACGACGC CATTCTGCCGTGGGGCGTATGGCGCGGAGAAGTGGCGCTCGATTCCTTCA TCAACAGAGTAGGCGGCAAACTCCGTTGAGGTGAACTCGCCGCCGTTGTC CGTGCGGAACACGCGCAGTTTGCGTCCGCTTTGAGCTTCTGCTGCTGCCT GGACTCTCTTGATGGCATCCGGTGCGTTCTTCTTGGCTGCCAGGAGCACC ACCCACATGTAGCGAGTGGCATCATCCACCAACAGCAAGTAGTAGCGCTG GCCTCCAGGTGTCGCTGGCGAAATGGGACCGCAAAGGTCACCGTGGACAA GCTCAAGTAGCTCCTGTGCGCGATACCTTGCCTGCCGAGGGAATGCGCCG CGGCGATGCTTGGTGATGACGCACATGTCACAGAACTGCTCCACATGCTC CAGCCGTGGCAGCCCACGTGCCATAGCGAGGCGTCCCATCTTCTCCAAAG CGTCGAAGTTGAGATGCCCAAATCGCTCATGCCAGAGCCAAGCAATATCA TCGCGGCGGGCAGAGAGACAAGTCGACTGGGCAATCTCAAGATGGAGGCG GTAGAGACGATTTCGGTCGCGCTCGACTCGAACAAGGAGCCGACCTTGTT GATCCCATATGCGAAGCACACCTCTCCTGATCAGCACACATGCGCCTCTC TCGTCGAGTTGACCAATGCTGATGATCGAGTTCTTCAGACGTGGGATGTA GTAGACGCCGGTGAGAGCCTTGTGTTCACCATTTTTGCCAGCAAAGATGA TGGTGCCCATGCCCTTGATTTCAACGACGGAGCCATCACTAAATTTGACA GTGCCGGTGACCGTTCTGTCAATTTCAGCAAAGGCATCGCCATGGCCCAT CATGTGATTTGTGGCAGCGGTGTCGAGGTACCAGCCCTCGATTCGCTTGT CGTCGTTGCTCGTCTCGAGGAAGGCTTTTGCCTTTGGCTCGTCGATGTGG AGAGGGGTATGCTCTGGAGCTGTAGCGGTGTTGTCCTTCACCACTATGGC TAGGGCTGGAGCAAGCTTTTTCTGCATCACCATGGCAGCAGCTGGAGTGT CGCTTTTCTGCACTATCATGGCTGGGGGAGGAGTGATGCTTTGCTGCACC ACCACGGCTGGGGCAGGAGTGGTGCAGACCTGTGCCATAAGGAGTGCAGG CTCCTCATCATCTTCCTCTGCTTGGGCCAAGTATGCCCTGTTTCTCCTAG TCTGCTTGCAATCCTTGGCCCAATGGCCATGACGGCCACAGTTGCGACAT GTGTCATCACGTCGTCCGTCCTTAGCTGCTGCACGATCATCGTCGCCTTC TCCACCCTTTTTACGTCGTGGTCGTCGTCGTTGCTGCCTGCTGCCGTTCG CAGGCATGGAGGAGCTGCCTCCTTGGCGCCCCTTCATCTTCTCTCGCCAC TGCTCCTCGGTGAGCAGGAGCTTTCCCTGCTCACGTGGCGGCTCAGGCGA CTCGAGACTGTCCTCCGCTGCCTTCAGCCGACTGGTGACCTCCTCCAACG ACATCTCAGAAGTGTCAAGGAGGGTCTCAATTGCAAGGGCTATCTGCGAG AGCCTAGACGGCACAACCCGCAAGAACTTCTCGACGACTTGAGTTTCGTC GATGGGTGATCTGAGCGTGGCGAGGCTTGTGACGAGGTTGGTAAGGCGCA ACGCGAACTCGTCAACAGACTCACCGTCGCGGAACGAGATCATCTCAAAT TCCTTCTTCAGCTGTTGCACCTTGCCCTTCCGCACGCGGTCTGAACCGAC GCGCATGGCTCGGATTGCCTCCCACGCCTCCTTCGCTGTCCTCTTGACAG CCAGTCCAGCCACCATTTCTGGTGGCACCGCTTGCAAGATGGCCTCCAGC GCCATTCGGTCTTCCTGGAAGTCGTCGGCGCCGAGCTCAATCGCATCCCA AATACCCCGAGCCTGCAACTTCACCTTCATGAGGAGGCTCCATTCGGTGT AGTTCGTCCGCGTCAGCAACGGGTAACTGCCGCCGCCGACGTCCTTCACA ACACGCTCAACCACGACCTCGCGCCTTCCTGCATCGCGGTCGTCTCGGTG GCGGTGAAGGGGAACGGCGCCGCGGCTGGGCAGACAGACTGCGGGCAACA CCCTGATTTGGAGCTGACATCTCTCACGATCCTATCTTCACCAACAGACT GGCTCTGATACCAACCGTTAGTCTCGTTAGTTCACAGGTAGTGTGTAGGA AGGTGGTTTTGTTTGTGGCTGCCAAAAGCTTCTTCTTGCAGCCTGTATTA CATTGTGGCATATATATATAGGAGTACAAGAGCAGGTCGGTTTACTCCTG AGAGTTCTAGAGCTTTCTACTGCTATCTAGCTTACTGCCTAAGATTTACA CACCTAAAGCTGCTTCTAGAACCTACCCAGTACTACTACCAATACTGTAC TACTAAAACCTACCAGAGTACTAGTCCTAGAACCTACTAGTAGTAGCTTA ACTCCTAAGCAAGGATTACTCTCACAACCGATGACGAGGTGCTAATTATC TTCATCTGCTGCATTACAGAAGACACATGTATCGATGTGTGGCAGTCCTT GTTTAGCCAGTTGGTCTGTAGTCCATACTCTTCCCCTGATAAACAACTGA ACCCTGATCTTGTATCTAAGAGGAGCCCAAGATTTCCATAGAGCTTACTG CCTAAGATTTACACACCTAAAGCTGCTTCTAGAACCTACCCAGTACTACT ACCAATACTGTACTACTAAAACCTACCAGAGTACTAGTCCTAGAACCTAC TAGTAGTAGCTTAACTCCTAAGCAAGGATTACTCTCACAACCGATGACGA GGTGCTAATTATCTTCATCTGCTGCATTACAGAAGACACATGTATCGATG TGTGGCAGTCCTTGTTTAGCCAGTTGGTCTGTAGTCCATACTCTTCCCCT GATAAACAACTGAACCCTGATCTTGTATCTAAGAGGAGCCCAAGATTTCC ATAGAGCTTTTGCAGATTCACAAAGAATTTTTGTTTGGACGTGTGCTTGA TACACAGACTTAGTTGAGAAAAACCTTTTGGTTCCCACGACCACACCCAT TTCTCACTCTCCTCAGGTTGCAAATTGACAGGGTTTACTACCTCCCATAT CTCCAGAACTTGGAGAAACGTTCTTATAGATATTGGCTTCTTAATGTCAT CGATCCAACTGTTGTTGACAAAAGCTTGAGACACTGTTTTCTTTATTTTG GTGAGAGGTTGAATGATTTTGAAAACATCTGGGGCAATCTCCTCTATGGT TCATCGGTTAACCCATTTATATGAGTCCAAAAGAAAATCCTTTCGGCATT ACCCACAACCACCTTGGCTGCCGCATTGAATATATGTCTGATTGGGTCCA CCTACAGGACTTCGAGGGAACATCATGGTTTTTTCTCCTCGCCCTTAGGT TCCACGCCCATCCACCCACAAGGCCGTGCTCATTGCTTCTAGGTTTAACA CCCCTAAACGGTTTTCCAGTTGACCAAACATTTGCCACCCTCGACAACAT CCGTTCCCTTCGAAAGAAAAGCCATCATTATCTTGTCTATTGTTTTGAAC ACCCACAGAGGGTCCAAAGACATCAAATGGAAGATGGCAATGGCACTTAG ATCGGACTGGACTAAAATTAATCTTCCACCTTGAGTCAACATGTGTGTTC TCCAATGAGCAAGACGACCCAAAATATGTAATTGGAACTCTTCTTTGCGC ACTTTTTGTGCAAAGGAAGACCCAAAATATGTAATTGGGAGTTTTGCCAA GCTGCAATTTAGGAGAACACTTATCTCCCTTCGTTATGTCCTCATTGCCA AAAAATAAGTGATATTGAACTCTTGTCCATATTGCACTTGAGGCCTGAGG CTTCCCCAAAGATGTCCAAAACCTGCTTGATTCCCAAAGCTTCATGGTTA TCTTCTTCGATGAAAAGAATTACATCGTCCTCCTAAACCGGCAACCATTG TGGTATGGGCTGTTCATTTGAGAAAGAAGCAAGGATTCCATTTGTTTTGG CCTTTGCAGCAAGAGGCTGAGAGCATCCATTGGCACCGAGATTGGCTAGT CGTGAGACAGTATATGGTCCATTCTGCTTTGTGTATAACATAGCCCAGTA AGGCCCATTAAGTATCTGAACTGTTCATCTTGTTCAATTCTCTACTCCGA TGCTCTCTCTCTTTCTCGTTGGGTCGCCTTATCCTTCCTCTGTTTCAACC AGTGACAATGGCTGCGCTGCAGTTCCTCCTCTGCTGCCACAGCTCTTTCC CATACTCTTCTCTGTTCTTGCACTGAGATGTGCTGCCACCTTTCTCCCCT GTAGCGCCGCCGCTTCCCGCCGCCAGAGGACCGATTCCTCGCCGGCTGCC TGTTTCAACACCTAGGGAAAAGGCAGGGCGTTCACCAGCACCTCGTGGTT ATGCGCTGCCTAGAATAACGCCTTTTTGAACCTTGGTTATTGTTGCATGT AAGGCCCTTTGTATGATTGATACAAATGCAACTCTGTAACCTGAAAGTTC AGTTCTAACAAAGTTTATGTCTCTTGGCTGAAATTTTAAGGAGGTGGTGA AGTTGTCTCACTCGATACAAGTGCAAGTATGTACTGATGATATTGCTGTT GGTTGGTTAGTTATATGTATTTCATTATGTGGCCCACTTGAGTAACTATG GTAATGTGGCTGCAAGATTAGTTATTGGCTGTTTAATTGAGTAGCTCATT ACTCATCATTTGAAATGTGTAGCCAGTAATGTACCCTTTGATGATACCAA TGCACAATCAACCTTGAGTAGTATTTTTATAGATGGAAAAAAAATTAGCT ATGCATTCTGTTCCAAAATGATTTTCTAGTTTTGTCCTAAGTCAAACTAC TTCAAGTTTGACCAAGTTTATAGAAAAATATATTAACATCTAGAAGACCA ATTTAGCTTTATTAGATTATTCATACAATATATTTTCATACTATATAGAT TGAACGATGTAAATATTGGCAAATGTTTTGTTAAATCCAGTCAAACTTCA ATTATTTTTGAATGGAGGGAGTATTAGCTACTCTGTTTGATAGCTGGTAC AAGTCGTCTTGTGTATATTTCTACTTGCTTGATGTAAATTTTTGCACGTG CCCTAACCTGAAAACTTTGCTTGCTGCAGACACACTCGTTCTATTCTTTT CACTCAGTATATGATGTATTATGAAGTATCTCTAGGTGACTACGTCTGCG CTGGCACTGCCTACCCATGATGTTTCCACGCCAGCCATTTGTTCTTATAA TGTGTGCTCTGTTGTGCCTTAGGTGCTTATCAACTGCCGGAACAACAAGA AGTTACTTGGCCGCGTGAGGGCATTTGATCGCCACTGCAACATGGTTCTT GAGAACGTTAGGGAGATGTGGACCGAGGTATGCCGTCACATCATCCCAAC TGCCGCTTCATCGTTTTCTCTGCGTTGTATATTGATTTGTTCGCTTTGCT TAACGTGAGCTTCTGTCGTCACAGGTTCCAAAGACTGGGAAAGGCAAGAA GAAGGCTCTTCCTGTGAACAAGGACAGGTTCATCAGCAAGATGTTCCTCC GCGGAGACTCGGTCATCATTGTTCTGAGGAACCCGAAGTGAGCCTGAGGA CGGTGCCTTTGTACCACCAGAAAAGCCTCTTCTCTATGCCTCTGTTAGTT TGTAATGCCGAATGTTATCAGTGTTGATGGTTCAGTGTTGTAGTTTTGGA TGTTATGAGTTTGCCTATCTTGCGTCTAACTTGCACCGGTAGCGCTTCTT TCTCAGATCATCAATACAGGCAAGTTCGTGAATTTATAGTTGCCTATTAA GGGCATCGTGCTGCCATATATGTTCATCGTTTGTATCATCTTTAGCTGCC TCCATTCACACCGCATTTTTTGGATATGAAGCATGGACATGGCAGATCTG GGGATTACAGGCACGCGCTGCCACAAGAACAAGCATGGCGTCTGGTTGAA GAAGCCTGGTTCGCTCTGCTACTGCCCTGCTACATGTTAAATGGTGAAAT GTCACTTGGCAAAAGCATATGGGCAGCACATATGGGGATCGCAATGGCAA CGCAATATATTTCTGGAAAGGACGCGTTGATCCCGAACGGTTCATCACTG AGGGTGATCAGAAACAGGATGCATAATCTGCTCAACCAAAGTACCTCTCA TAAATCAATTGGATGATGAACTCATCAACCGAACCTTCTGCTCAGTGGGA GCAGCCGCGGAATTTGGGTCATGGGGAAGCGGAAGGCGTGTAAAGGTTAT GCACAAAACCTAGTGTCACGCCTGTTGGCTGCCGGCCACCAGAGATGAGC AGTAAACTTTTACCATATAGATTTATCCAATTTTTACCGTTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.