Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA002614

[Submit comment/correction]

Sequence	AA002614
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA002614
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGACTGCGTTGATGGCCAAGGTGGAAATGATACATTTGTTGTTGATGGTT GTTCTACTTGAAGCAAGAAAGACAAACTAGATACTCATGTGGGTGAGGTT AATAGCTTTTATAATGTAGCTGTTAAAAGATGTGATGTTTTAATGAATCA AGATCAGTCCATAAGGATTGCCCTGCATAAGCAAAATGATATTACAACAA AACAAAATCGTATTCGATTGAATACTTTTGTTGAGTCATCTAGATACCTT GTACATCAAGGTTTAGCTTTTCGCGGAAATGACGAATCAGTGGAATCAAA AAATAAGGGAAACTTTAAAGAGTTATTACGGACATTGGCCAATCAAAATG AGGAGGTAAGGAAGGTAATTAGAAATTGAAGGGTTTCGCGGCATAGTAAA TCAAAATTTTCTACGGAGCGAACAGAGGGAAAGCCAAGATCTAATATAGG AGATGCAAACAACGAGAGAGATTGGATTAGATCTTCATACCCTTGAAGAT TCGCACAGCGGAACGTTCGTCGGAACGTGGGTGATGTAGTCGTACTCGCT TCTCCTCCTCGCGATCCGATCCGATCTAGCACCACAAGTGGCGGTGCCTC CGTGAGATGCACACGTGCAGCACCTCGACGTCTCCTCCTTCCTCGGACCA GCGAGTATGGTGGAGAGATAGATTGGATCTACAACACGACGGCGTGGTGT ATATGGTGGAGAATTTCTGCTGCAGGGCTTCGCCTACAAACAGTCGGGAG GGAGAGAGGAAGGTAGCAAGGCTGCTAGGGCTTGGAGGAAGGTGTGTGGG GGGGGAGGGGGCGCACCACCCCTCTATATATAGAGGGGGGGCGGCCAGCC CTTGCCCCTCCTCCAAGCCTATCTCTAGTTTAAACAATTTAAACTCTCCC TTATCTAGAAATCCTATCTCTAGTTTAAACGATTTAAACTCTCCCTTATC TAGAAATTCTATCCCGAGATTTAAACGAGTCAAATCTCTCTAGAATCGGC TGGGCCCTATGGGGCCTTGTGCCCCTGGCCCAATGCGGCCAGGACACTCC CTCATAGGCCCATGCCCCCTCCCGGAAGGTGGGGCCACGTTGGTCCCCTT CCGGAAGGTTCTAGAAGCTTCCGGTACAATACCGATTAACCCGGAACAAT TCCGAACTCCAAAAACTGCACTGCCTTATATGAATCTTATTCTCCGGACC ATTCCGGAACCTCTCGTGATATCCCGGATCCCATCCGAGACTCCGAACAA AAATTCATAAACCAATTATCCAATCTATCCTAGCGTCGAGATACGTTAAG TGTGTGACCCTGCGGGTTCGAGAATATGCAGACATGATCTTTTATCAATA ATCAACAGCGGGGTCTGGGCACCCATATTGACTCCCACACATTCATCGAT GATCATATCGGATGAACCACGATGCCAGGATTCAATCAATCCCATATATA TATATTCCCTTCGTCTCGCGATATTTTACTTGCCCGAGATTCGATCGTCG GTACCGTCATACCTAGTTCAATCTCGTTCACAGCAAGTACTTTACTCGTT CCGTAATCCGATATCACTTTGTGATTAACTCCTTAACCACATGCTTGCAA GCGGTGTTGATATCGATTACCGAGTGGGCCCGAAGTATATCTCTCCGACT TGGGAGGGACAAATTCCATCTCGATACATACAACCCAACAGATACTTTCC GATCACCTGAGAGACACCTTTATGATCACCCTCTCATAGGATGACGTTTG ATGACCTCAAAGCTTTCTTCCGGTACCAGGGAGTTGCATTATCTCATGGT CTAAGGAATACAATATTTGACATAGGAAAAGCTTCGCAAAGACGAACACG ATGACACGATCTAATTGCTCTGCTTTGTTTGGGTCTATCCACCATATCAT TCTCCCAATGATATGATCTCATTATCAATTGACAACTCATGTCTATGGTT AGGAAACCTTAACCATCATTGATCAATGAGCTAGTCCATAGAGGCGTACT AGGGACACGGTGTTGTTTAGAAACCACACAAGTATTAATGTTTCCGCTTA ATACAATTCTAGCATGGAATATAAACTTTATCATGAACAAGAATTATAAT AATAACATCTTTATTATTGCCTCTAGGGCATAATTCCAACAGTCTCCCAC TTGCACTAGAGTCAATAATCTAGTTTACATCTGGCAACAATCTCACACCC ATGGCACTGAGGTGTTGATCATGTTTTACACGTGGAAGAGGTTTAGTCAA TGGATCTGCGACATTCAGATCCGTATGTACTTTGCTAATCTTCAGATCTC CATCTGCTATATAATCTCGGATTATATGAAACTTGCGGTTGATATGCTTG GTCTTTGGATGATATCTTGGTTCCTTAGCGAGTGCTATGGCGCCAGTGTT GTCACACAATATCTCCAGTGGGTCCAATGCACTTGGAACCACGCCAAGCT CAGTGATGAAGTTTCTGATCCAAACTCCTTCACTTGACGCTTCTGCAGCA GCCATGTATTCCGCTTCTACTGTAGATCCCGCGATCACGCTTTGCTTGCA GCTTCTCCAGCTCACAGCTCCTCCATTCAAAATATAAACGTATCCTGTCT GAGATTTAGAATCATCCTTGTCGGTGTCGAAACTAGCATCGACGTAACCT TTTACGACAAGCTGTTCATCACCCCCATAGACTAAGAACATTTCTTTAGT TCTATTTAGGTACTTTAGGATGTTCTTCACGGCTGTCCAGTGTTCCACTC CTGGATCACTTTGATATCTGCTCGTCAAACTAAGAGCATTGGACACATCC GGTCTAGTACACAGCATGGCATACATGATGGAACCTATGTCCGAGGCATA AGGCACTTTGCTCATAGCTTCCCTATCATTTACCGTAGCTGGACACTGAG CCTTGCTCAATATCTTACCTGACAACATAGGCACTGAACCTTTCTTTGCC TTATCCATTCTGAACCTTTTCAGAACTTTGTCTAGGTATGTACTCTGGCT TAAAGCTATCAGGCGTATTTGTCTATCTCTATAGAGCTTGATGCCCAATA TATAAGCAGCTTCACCTAGGTCTTTCATTGAAAAACACTTGTTCAAATAA CTCTTCACATCGTTAAGCATGTTGATGTCATTTCCGATAATCAATATGTC ATCCACATACAGTACCAGAAACGTCACCGAGCTCCCACTCACTTTCTTGT AGATGCAAGCTTCGTAGCAATTTGGAACAAATCCAAAGCTCTTGATCACT TGATCAAAACGAAGGTTCCAACTCCGAGATGCTTGCTTCAGTCCATAAAT GGAACACTGAAGTTTGCATACTTTACTAGCATCCTTAGGATCGACAAAAC CCTCGGGTTGCATCATATACAACTCTTCATCAATGTTGCCATTGAGGAAA GCAGTCTTGACATCCATCTGCCATATTTCATAATCATGAAACGCATCAAT TGCTAATAAAATCCGAATGGACTTAAACATCCCTACGGGAGAGAAAGTCT CATCGTAGTCAACACCTTGAACTTGTCGAAAACCTTTTGCGACAAGCCGT GCTTTATAGACGGTAACATTACCATCCATGTCCGTTTTCTTCTTGAATAT CCATTTGCACTCAACGGCCTTTCGGTCGCTAGGAGGATCCACCAAAGTCC ATACTTGGTTTTCGCTCATGGATCCCAATTCGGATTTCATGGCTTCCAGC CATTTCTCAGAGTCTGGGCTCATCATCGCTTCCTCATAGTTCGTAGGTTC AATGTCTTCTACCAACAAGACAGTCAAGACAGGGTTGCCGTACCACTCAG GAGGGGCACGCGACCTTGTCGACCTGCGACGTTCAGTAGCAGCATCGTCC GAAGCTTCATGATCCTTGTCATTAGCTTCCTCTATTGTTGGTGCAGGCGG CACTGGAACAATTTCAGGTGCTGCGCTACTCTCCAATTCAAGAGAAGGTT CAATAACCTCGTCTAGCTCTACTTTCCTCCCACTCACTTCTTTCGAGAGA AACTCCTTCTCAAGAAAGGAACCGTTCTTTGCGACAAACACTTTGCCTTC GGTTCTGTGATAGAAGGTATATCCAATAGTTTCCTTAGGGTATCCTATGA AGACGCATTTCTCCGCTTTGGGTTCGAGCTTGTCCGGCATCAACTTCTTG ACGTAAGCTTCGCATCCCCAAACTTTAAGAAACGACAACTTAGGTTTAGC ACCAAACCACAGTTCATACGGTGTCGTCTCAACGGATTTAGATGGAGCCC TATTTAAAGTGAATGCAGCGGTTTCTAATGCATAACCCCAAAATGATAAC GGCAAATCAGTAAGAGACATCATCGATCGGACCATATCTAATAGGGTTTG ATTCCGGCGTTCAGACACACCATTGCGCTATGGTGTTCCGGGTGGCGTGA GTTGCGAAACAATTCCGCTTGCTTTAAGATGCGTGAGAAAATCATAACTC AAATATTCGCCCCCACGATCGGATCGTAGAAACTTAATCTTTCTGTTACG ATGGTTCTCCACTTCATTCTGAAATTCTTTGAACTTTTTAAACGTTTCAG ATTTATGTTTCATTAAATAGATATACCCATATCTACTTAAGTCATCGGTA AAAGTGAGGAAATAGCGATATCCACCGCGCGTCGAAACACTCATCGGTCC GCATACATCGGTATGTATGATTTCCAACAAGTCCGTTGCTCGCTCCATCA TACCGGAGAACGGGGTTTTGATCATCTTGCCCATGAGGCATGGTTCGCAT GTGTCAAATGATTCAAAATCAAGAGACTCCAAAAGTCCATCAGAATGGAG TTTCTTCATGAGCTTTACTCCAATATGACCTAGACGACAGTGCCACAAAT AAGTAGTATTATCACTATCTACTTTGCATCTCTTAGCCTCAATGTTATGG ATGTGTGTTTCATCCCTTTCGAGATTTAGAAGAAATAAACCATTCACAAG AGGTGCATGACCATAAAAGATGTTTCTCATATAAATAGAACAACCATTAT TCTCCGATTTAAATGAATAACCGTCTTGCAATAAACACGATCCGGAAATG ATGTTCATGCTCAACGCAGGCACATAATAACATTTATTAAGGTTTAAAAC TAATCCCGAAGGTAAAACTAAGGAGAGCGTGCCAACGGCCATCACATCAA CTCTTCATCCGTTGCCAACGTGCATCGTCACCTCATCCCTCGCAAGCTGC CGTCTATTCCGTAGCTCCTGTTTCGAGTTACAAATATTAGCAACTGAACC GGTATCAAATACCCAGGCACTACAACGAGGGCTAGTAAGGAAAACATCAA TAACATGTATATCAAATATACCTTTGATGGTGCCAGCCTTCTTGTCCGCT AAGTACTTCGGACAGTTGCGCTTCCAGTGACCCTTGTCCTTGCAATAGAA GCACTCAGTGTCCGGCTTGGGACCAGACCTGAGCTTCTTCTCAGCAGGGG CATTGCGCTTGCCGCCGCCCTTCTTGAAGGGCTTTTTTGCTCCCTTACCT TTCTTAAAGGAGGGCTTGTTGACCATCAACACATGATTATCCTTCTTGAT GTCCACTTCCGCAGCCTTCAGCTTTGCGAAGAGCTCGGTGATCGTATCAG TGGAACCAATCTGATTATGAGTCACTACAAAACTTTTGTAGCTAGGAGGG AGTGATTGCAGAACCCTGTCAATCTTGAGCTCCTCTGGAATCGTGCATTC CAGTTGCTCAAGGCGTTGAGTGTAGCCCGACATCTTTATGGCGTGCTCAC TAACGGAACTCCCTTCCTCCATCTTGCAGTTAAAGAACTTCTCAGAGATC TCATATCTCTCAGAACGGGCTTGAGTCTAAAACATGGTTTTCAGCTCCTC GAGAATCTCAAAGGGCCCAGGATAGGTTTCAAAACGATTTTGAAGCTCCG GTTCCATAGCAAACAACATGGTGCTCTTAATCACACCATAATCATCTTTG CGCGACTGATAGACAACTTTCTCATCAGCCGGCGCAGTTGCAGCCGGCGC AGTTCTCAAGGACATAGTCCTTTTGTCCGCCAGACAGAATGATTCCTAGA TTGCGGAACCAGTTGGTGAAGTTAGACCCATTGTTTCTAAGCTTTTCTTT CTCAGCAAAAACGTTGAAGTTGAAGTTGGACTTGGCCATTGGATCTACAG TATTTGCAAGTACAATTTAGACTATGTTCATGATAAATAGTTCAACTTAA TCAAATTACTAGATGAACTCCCACTAAATTCAACATCCCTCAAGTTGTTT AGTGAACACGATCCAAATTCACCACACCTAATCCGATCATCACGAGAAGA GATGTGGTTTCAATGGTGGACAACAAAGTGTCGATCATATCATTCATATG ACTCATGCTTAACCTTTTGGTTCTTGTGTTCCGAGGCCATGTCTGTACAT GCTAGGCTCGTCAAGTTAGACCCAAGTATTTCCGCGTGTGCAAAAACTGG CTTGCACCTGTTGTATGTGAGCGTAGAGTCTATAGCACCCGATCATCACG TGATGCTTGGACACGACGAACTTTCGCAACGGTGCATACTTGGGGAGAAC ACAGTTTTTATCTTGATCTTTAAGTGAGGAATCATCTTATAATGCTACCG TCGCGATCTAAGCATAATAAGATACATAAAGGATAAACATCACATGCATA TAACTTTATGTGACATGGTATAGCCAATCTTCGCGCAATGATCTCCATCT TGTGCGTTCCGGCATGATCTCCATCACTCCACCATGATTGCCTCCACCAC GAATAGCAACTACAACTATTGCTAACTACTTAGAGATAAAGTAAAGCTAT TACATGGCGTATAAGAAGTTGACTCGCAGGTCATACACAATTATAAAGAC AACCATATGGCTCCTGCCGGTTGTGTACTCATCGACATGCAAGTCGTGAA ACATTACAAAACATGATCATCGCATACAATATACACATCACATCTTGGGC CATACCATATCACAGAAAACACTCCCTGCAAAAACAAGTTAGACGCCTCT ACTTTGTTGTTGCATGTTTTACGTGGCTTTATGGGAGTAGATGCTAAGAA CGATTCTTACCTACGGAAAGCCACAACGGTGATATTATGGTTGCCAAACT CCGGTGTTAATCCCATGACAACTATAGTGAGAGAAACTGACATCCACCAG CCGCATGTGTGGAACAAGCCACACGTCAAGTGCGGAGCCGGTCTCGCGAA CGACGTCGCGTAAGGTTGGCCTGGACCGCTTCAATCTCACTATCCCGCGT CATAAGAAGAACACAAACAAGAGGCTTGCAACAGAAAACATCAACGCCCG CAACAACCATGTTGTGTTCTACTCGTGAAACACATCTACGCATAGATCTA GCTCTGATACCACTGAAGGGTTTCGCGGCATAGTAAATCAAAATTTTCTA CGGAGCGAACAGGGGGAAAGCCAAGATCTAATCTAGGAGATGCAAACAAC GAGAGAGATTAGATTAGATCTTCATACCCTTGAAGATTCGCACAGCGGAA CGTTCGTCAGAACGTGGGTGATGTAGTCGTACTCGCTTCTCCTCCTCGCG ATCCGATCCGATCTAGCACCACAAGTGGCGGTGCCTCCGTGAGATGCACA CGTGCAGCACCTCGACGTCTCCTCCTTCCTCGGACCAGCGAGTATGGTGG AGAGATAGATTGGATCTACAATACGACGGCGTGGTGTATATGGTGGAGAA TTTCTGCTGCAGGGCTTCGCCTACAAACAGTCGGGAGGGAGAGAGGAAGG TAGCAAGGCTGCTAGGGCTTGGAGGAAGGGTGTGGGGGGGGGAGGGGGCG CACCACCCCTCTATATATAGAGGGGGGGCGGCCAGCCCTTGCCCCTCCTC CAAGCCTATCTCTAGTTTAAACAATTTAAACTCTCCCTTATCTAGAAATA CTATCTCTAGTTTAAACGATTTAAACTCTCCCTTATCTAGAAATTCTATC CCGAGATTTAAACGAGTCAAATCTCTCTAGAATCGGCTGGGCCCTATGGG GCCTTGTGCCCCTGGCCAAATGCGGCCAGGACACTCCCTCATAGGACCAT GCCCCCTCCCGGAAGGTGGGGCCACGTTGGTCCCCTTCCGGAAGGTTCTA GAAGCTTCCGGTACAATACCGATTAACCCGGAACAATTCCGAACTCCAAA AACTGCACTGCCTTATATGAATCTTATTCTCCGGACCATTCCGGAACCTC TCGTGATATCCCGGATCCCATCCGAGACTCCGAACAAAAATTCATAAACC AATTATCCAATCTATCCTAGCGTCGAGATACGTTAAGTGTGTGACCCTGC GGGTTCGAGAATATGCAGACATGATCTTCTATCAATAATCAACAGCGGGG TCTGGGCACCCATATTGACTCCCACACATTCATCGATGATCATATCGGAT GAACCACGATGCCAGGATTCAATCAATCCCATGTATATATTCCCTTCGTC TCGCGATATTTTACTTGCCCGAGATTCGATCGTCGGTACCGTCATACCTA GTTCAATCTCATTCACAGCAAGTACTTTACTCGTTCCGTAATCTGATATC ACTTTGTGATTAACTCCTTAACCACATGCTTGCAAGCGGTGTTGATATCG ATTACCGAGTGGGCCTGAAGTATATCTCTCCGACTTGGGAGGGACAAATT CCATCTCGATACATACAACCCAACAGATACTTTCCGATCACCTGAGAGAC ACCTTTATGATCACCCTCTCATAGGATGACGTTTGATGACCTCAAAGCTT TCTTCCGGTACCAGGGAGTTGCATTATCTCATGGTCTAAGGAATACAATA TTTGACATAGGAAAAGCTTCGCAAAGACGAACACGATGACACGATCTAAT TGCTCTGCTTTGTTTGGGTCTATCCACCATATCATTCTCCCAATGATATG ATCTCATTATCAATTGACAACTCATGTCAATGGTTAGGAAACCTTAACCA TCATTGATCAATGAGCTAGTCCATAGAGGCGTACTAGGGACACGGTGTTG TTTACAAACCACACAAGTATTAATGTTTCCGCTTAATACAATTCTAGCAT GGAATATAAACTTTATCATGAACAAGAATTATAATAATAACATCTTTATT ATTGCCTCTAGGGCATAATTCCAACAGAAATGCTCCCAAAAATTGCAAAT GGACATGTCCGGACATTTAGAAAGAAATCGTGAGTTATTATGCAAAGGTA AGCATGACTATGTTTATTTCATCCGATTTATCTCTTGTTGTAATCAAATG ACATTGCCTCTTGTATTTTACAGATAACATTGAATTATATTCTCGAAGAT ATTGGTGGTGATGTGTTTAGTTTGTTGATTGATGAAACTTCCGATGTCTC CGACAAAGAACAAATGGCTGTGGTTTTGAGATATGTGGACAAGCATGGAC TAATCATGGAACGATTAGTTGGAGTTGTACATGTGAAGGAAACTTCTGCA ACGTGTCTGAAATCAACTCTTGAAAAATTGTTCGTTGATATTGGATTAAC ATTACAGCAAGTTAGGGGCCAATGTTATGATGGGGCAAGCAACATGCGGG GTGAGTTCAATGGTTTAAAAGCTAAAATTCTGGAAGATAATATGTTGGAA TATTATGTGCATTGTTTCGCTCACCAGCTCCAGTTGGTTATAGTGGCAGT GTCAAAGAGGAATGATGATATTACAGATTTCTTCTACATGATCTCTACTC TCTTCAATGTGGTTGGAGCCTCTTGCAAAAGAAAGGACATGATTAGAGAG ATGCATAGAGAGAATGTAAAAAAAGCCATAAGTAGTGGAAAATTAGTACC GGCACTGAACTAGATCAAGATCAATCACTTCAGAGGGCGGGAGAAACTCG TTTGGGTTCTCACTATAGAACTCTCTCAGGCCTTGTTTAGTTGTTCCCAT CAGTTATTAGTGTTCTGAAATATGTAGCAAAAGATGGCAAGAGAAGTTCC AAGAAAAGTGAAGCACGTGGCCTCCTATCATATTTTGGAACCTTCGACTT TGTGTTCTATTTGCACATGATGTTACATATATTAGGGAGTGCCAACACGT TATCACAAGCTTTGCAACAGAAGGATCAAGACATCTTGAATGCCATGTCT TGTGTGAAGTCAACAAGGAATGAGATGTAAAATCTAAGAGATAATGGATG GGAGTCACTTCTACAGAAGGTATATTCATTTTGTGAAGAGCATGACATTC TGAAACTAAACATCCATGATGAATATGTCGATAGACATAATACACGGAAA AAAAAACCAATATGACAAACCTTCATCATTACCAAATAGAGTGTCTTAAC TCTGTTATTGATTGGCAACTTCGAGAGTTTGATGAGAGGTTCAATGAAGT AAATTCAGCATTGCTTATTCACATGGCATCTTTCAGGCCAAAAAACTCAT TCTCTGCTTTTAACCTCGAGAGCTTATTGAAGCTAGCTGAGTTTTATCCT GATGATTTTGATTCATCAAAATTGATGGATCTTGGTCATGAACTTCACAT TTATATTGACAATGTGCGGGCAGACGAGCGGTTTGCAGATTTAGATGGTA TTGCTGATCTTGCAAAATTGTTGGTGGAGACTAAGAAGCATCTTTGTTTT CCTTTGGTGTATCAACTTCTGAAGTTGGTGTTAATTTTTCCGGTTGCGAC GGATGCTTTTCAGCAATGAATATTGTCAAGAGTGTTTTGCGAAATAAAAT GGGTGAAAAGTTCATGAGTGATTGTATGATTTGCTATGTGGAGAAAGATA TATTTTCTACCATCACAAATGATGATGTGATTGATCTCTTTAAGAAGATT AAAGATCGAGAAGGGAAGCTCTAAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.