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GrainGenes Sequence Report: AA039322

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Sequence
AA039322
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039322
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGTGCATGTGCCCTCGATGCCAGGATCAATTAACTAGCCACTCGATTCAC
CCTCGTCCAGCCTGCGATGATGACGCAAACTAAGTGCGCATTTTCCGATT
TTACCCTCGTGATGCCAATCCCACCCATCCCCTCGCTGCTGACCCCGCAA
GCGGCCAAGCCATGGCAGCTATAAATCCACACCCCAGGCCCTCCATCTCA
AAAATTTCAAGCCTCCCTCCCATCAACACCACAACGGCCACATAAGCAAT
CGAGCAGTAGCCATCTTCTCCTTCTCCTTTCTTCCAGCTAGCTACCTAGC
CAGGCTCACTGTCACCAGTACATCAGCACTCACCTACCTACTCATACTGA
TTCCGTTCCCACCATCCGTCCGTCCGGCCATGCCGAGCTCCGCCGCCATG
CCCGTCCTCCCTCCCGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCAT
CGTCTACTACCTCACCAGGCAGGCCGCCTCCATGCCCTGCCCCGTGCCCA
TCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTCCCCGGT
ATATACATATAACTAATCACCTCATCAGCCTTCGATCGATTAATCAACTC
CATGGATCTAATATAACTCGATCCGCTCTAATTAATCTGCTTCTTGATTT
GTATTTATGCAGGCCAGGCCTTGTTCGGGGAGAACGAGTGGTTCTTCTTC
AGCCCGAGGGACCGCAAGTACCCCAACGGCGCGCGGCCCAACCGCGCCGC
CGGCTCCGGGTACTGGAAGGCCACCGGCACAGACAAGGCCATCCTGTCGA
CGCCGGCGAGCGAGAGCATCGGCGTCAAGAAGGCGCTCGTCTTCTACCGG
GGCAAGCCGCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCG
CCTCACCGCCGCTGACAACAAGACCGCCAAGCGCAGAGGATCCTCCATGA
GGGTGAGCTTTTGTCTCCTTCACTTTTTTTCTTTTTTCAGAAGATGTTAG
TACTATATTCACTTTGGTAGTGGCAGTTACTTGTAAGCTACAACATCTTA
CTCACTATCACTACACGAGAATATATTTGCATTTACTGAATTATAATCTG
GTTTTTATATGCAGCTGGATGACTGGGTGCTGTGTAGGATCCACAAGAAG
TGCAGCAGCAACTTGCCCAACTTCTCCTCTGACCAGGAGCAGGAGCAGGA
GAGCTCAACGGTGGAGGACTCCCACAACAACAACAACACTGTCTCCTCGC
CCAAGTCCGAAGCTCTCGACGGCGACGGCGACGACCAGGTCCAGCTGCAG
CAGTTCTGCCCCATGGCGATTACCAAGTCATGCTCCATCACGGACCTGCT
CAACACCGTCGACTACGCCGAGCTCTCGCAGCTCCTCCTCGACGGCGGCG
GGTCGTCGTCGGATGCCGCTGCCGGCGCCATGGCTGCTTTTCAGCCGCCC
GAAAGCCCGCTGATCTACGGGCAGCCGCCATGGCAACAAACACTTAATTA
TAACAACAATTACGTGGACGTGCCACAGTTGGACGACCGTGATTACGCTA
ACGGTAACAACAAGTATAACAATGGCATGAAGAGGAAGAGATCCAGCAGC
AGCTTGTTCTGCAACCAGCTGCAGCAGCTTCCAGCAGACCAGTACAGCGG
CATGCTGATCCACCCCTTCCTGAACCAGCAGCTGCACATGTGAATCGATC
AGTAGCACTCGCCGGAGAACAGCTTGGAACTGGAGTGTCTTTACCGATCA
TCATATTATTGTTCCATTTGAACCTGCTAGCTGTAGATCGATGGGAGAAA
CCACGCGCGCGTTGTGGCAGATTTGGCATGAATTGATCTAGCTGTGTGGC
GTGATCGATATGAACGGAGAGAACCTCAGAATTCTTCGTTTAGTACAAGG
CTAGCTGTGTAAATTACGGGGTGTGGTTGAAATAAATTAAGCCAAGATTT
ATTACACATGATAATATATATGATGCAGATTTCTTAGCATTGGCCTGTGG
TTGATTACTGGTTATAACTTATAACTCAAAGAATAATGTAAAACCAAGGA
CGCATCCATGGTCGACACACGCGGCCTGCCTTGTTAATTAACTGAGGTAA
CCGATGATGTACACACGAGCCTAGTTAATTGGCTTGGCGTGTGCGGCTGG
TTTGGATCCTTATCCTCCGTACATTTGAAGGAATCAACCAGATTAGATTA
CTCCAATGTGTTAGTTTTGTCACTAGAAGCCAAAGTTCAGATCAAAACTC
AAGATTAAAAAATCTATATAAAACCCCGGGACCAATAGATTGTCAAAACG
TCATCTCGCAGGATGGAACCATCTAGCTAGCCAGCCAGCCATAGCATCGA
TTGTTTTGTCGCAGGACAAAAGGAGAAGGCGGCGGCGCACGTTGCTCAAC
CACTTATTATTATTACCCCATTATATACATATACTTGTAGGACACGTGTG
CATGGGACCATGGGGCGTTTGGTATATATCGCACGTTCCATCCGACGATA
AACCCAGAGCTGATCCCCTCCGTTTGGTCAAGAGCGTTTCCCCATTGGAG
ACACGGATTTGTTTATGCTTGCCAAGCGCTTAGTTTGAAACCATCATTAC
GTATACCATGAAAGAAGAAGAAGAAGAAGAAGATAATGCAAATTAATTAA
GGAATGTGAACTGGTAGTTTATCAACGTTACTACCTCCGTCTCGGTTTAT
AAGACTTACGCGTATTTCTAGGTTGACAAATTAACCAACTTAGCATGAGG
AACATAAGATAAAAACTATATTATTAAAAACTTTAAATGTTGTATTTTTA
ATGATATAATTTTTATATTATATAATTTATATTATAAGCTAATGCGGACG
ACCTAGATATACGCGTAAGTCTTATAAACTGGGATAGAGGGAGTAGCTAG
CTAGCCTTTTCGATCTGGTCTACCTCTACGGCTCTACCACCCCATGGTTG
GAAATCGGTGCACATGCTAACAGGGACTTCTCGCGCTTCATTGGCGCCTC
AAAGCTAGTTTAAGCTCGCGAGCGGCGGATCAGCCTAACTCCAAGCGCGA
TTAGAAGGCGGCGATGATGACGGATGAGGGGGGTAGGTTAAGATAAGAAG
GGTCCCAGCCAAGTCGTGACCGAAGCTTTATATGCATGGGTTATGATATG
TTATCTCTAAGCGAGCATGCACGCGAAAAGCTGGTTGAAAACGGGTGTGT
GGGGCAGGCTTACTAGGATCATCGTACGTCAAGAGGTTGAAAGCCTTATC
CGTGAGGTCATATGAGCATGACATGGCCGCCGGCTTCCTTTTCTAGAACC
AGACACCTAGCTAGCCACTGATAATTGGTTGCTAGTTAACATGCATGAAC
TCGATCTCGATTCTAGCATGGTCCCGGGTCGACTTTGAGCAAGTAATCAT
GAGGCCATTGCTTTGAAGCTTATTAGGTAAAATTTCTTTTCAAGAAGATA
ACATAGATTAGCTAGAATAATCTTTTTTTGACAATGGAGGAGCAACTCTC
TCGATCTCCCCATCTGAGGAGTAAATTGTAAAAAAAAAAACACCACAATT
GTGAAAAGTCATCAAACACCCACCAAAATACATGTTTTCCGGGTTTTTTT
TGTGAAGGGTTGATATCTTTTCCCCAATTGTGGTGTTTTTTGCAATTTAG
TCGCATTTGAGGATACATAACACAAGCACAAGACTACTTTGAATATTTAA
GCTACTCCTTGTTTGCTCATGTTAAGGTTGGTTTTCTCTGGTGGCAAGTT
CTAGCTTATCTTGCTTGTATTGTGATACTCTAGAGGTTATTGCAAATAAT
TCATTGCATCAATTTCAGTAATATTGAAAGTTGGAGGGGATTAGTTTGTC
CCATAGGTCTCAAAAATAGGAGGTTTCACACCTAAATCATTGTGTATATT
ATTTTATTATTCTATTACTTACCTATTATTTGAGTCCATTCAAGAAAAGC
TTTAAAATTTGAGGAGATTTTGTTATACATATTTACCATATCGGTGTATT
TTCTTTGGAGTTTCCCTCGGTAGCCTGAAAATAATAGTATGTGATGATCA
TGTAACAAATTGTAACCGACATGATTTGTTTGTTTTCATGTGATCGAGTT
GCTCGATGGCTTAGACTGCGCTTGTTGATCCTAGGACGGGTATCGCTCGA
GATGGGACAAAACTGATGAATAGATGTTTTTTCCTATTCACCACAATTTC
TGAAATTAGACCAGGTGCGTCTATGCGTTCTCCTTTTGCAAGAAATAAAA
ACGGCCAAAAATATGTAAGACCAAGTTCTAGTTTCTCCCATAAGTTGTTC
TCCTTGAGCTTCCCCAAGAAGTCATCTTCCAAATCTATTGAGGCTTCCAA
ACCGGTAAGGACAAAGTGAGTTTAGAAGCCAAAAATGTTTAGGAATCGGT
TTTGAGGGGAAACCGTGTGAGGATAGCTTCTCGGAGAAGCTAGCAGAGAT
ACTAGGGAGCTCCTATGTCACGACTCAACGCGTGCACTACTATTAATGCA
TGCTTGAAGCTTTCCCCGTAATGGGCCGTTCCAAATGTGGCACCGTAATA
TGTATGTTCTCTTTATTCTAAAAAAATATTATTATTTGTTTTTATTGTAA
AAGATATTTTCAAAAAATTATAAATTTAGAAAAAAAATATTTACAAAAAT
ATTCAAATTCAAAAAATGTTCGAAATCGAAAAACTTTCAAATAAAAAAAA
GTTCTAATTTGTAAAAGTGGTTGTGAAAAATATTCAAAATTTAAAAACAT
TTTGGACTCATAAAATGTTCAGACACAAAAAATTTCAAGCTTTAAAATAG
TTCATAACAATCGAACCACCCCAAAAAAGCTTGTCGAACAAACGAGAAAC
CAAGAAAGACCCAAAAAAAAACTACCAATACCGGTTAAACCATCCGCTAA
TTGGCCGGCCCACATCGAGCAACCGCGCTCGGGCGATAAATAGGAAATGT
CAACATACTACGCCTAAATATAGTGCTTAATTTGGAGAAGCAACTTGGGC
TAGAATCTACGTGGGCTAACAAAGCCCAGTATGTAGAATTTACCTGCGAG
GCGGATTAACTTGGGCTGTCACATCTTATTAAGCAATTGCGTGCACTTGT
GAAGCCAAAAAAAAAACGAAGGAAAAAAAAGCAGTTGCTTTGCACACCAC
CGAACAAGCTAGTCAGCACGACCATTGTATAACCCAAACAAATATTTTTG
TACTATAATACATCCTACGAAAATGCAATTGGTGAGCTGTTTGCTGACAC
ATGCATGGCAGAATTAAATATGCATCTCATTATGCTAAGACTAGGCTAGG
AGATTCAGATACATGTTCCGCGTAGTACTACATATGTTCCTACATTAGTC
CATGATGACAGCAGCTTCCTAGCTACTTTGCGACGGAATACTTTTTCTTG
CATCTGTATGTCCTAGTATGTCTGACGACATCATCTTGCTGCTGACATGT
CCTTGTATTCGATAGATAGATAGATCCGTGATGCGCCAGCTGCAACAAGT
TGAGAAAATGTCAGATTAAGACAGCAAATTTGGATTCCCGTTTCTTTTAA
TTCCTTTCCATAGGTAGCAGCGCAGGTAACCTAGCTAGCAACTCAGCAGA
AACTTCTCATCCTACGTGGATTCAATTAACCGGAACCGACATTGACCGGT
CAGCTGGCCAGACCAGGCCATGCATGCAACAGGTCGATCGTGACGGCGCA
GCTCTGACATGCTTTTACAAAGGACATACACAGCTGCTTAATTAGCTGGA
CACGCCTGAGTCTCTCGATCGGTCAAGATCCCGGCCCGGCCGGCCGGCGC
CAAATCCAGCAGTACCACCGGCCAGATAAGGTGGACCGTACATCGTGCGG
TCTCGAGCTGGCCGAGCCAGCATGCAACCACGTGCTGGCCCGTGGCCGCA
GAGAGAATAAATCGATCGAGGTCGAGGCTGCGCAGAGAACAATCGATCGG
GACTGATGACCACGTCGAGCAGAAGAAAGAGCTGACCAATTTCGATTGTT
CATGCAGATACAGGGTCTAGGTATGAACAGCCGCCGGCCGTCGAATAGTC
AAAAAAAGAAGAAGCATGCATGGATCGTGGATGACGGCGCTGTCATAAGC
TAGCTGCAGCGTACGGAGTCTTAATGTTGCTGCTGCTGCTGCTGCGCCGC
CTCTCGATCCGAAATGTCAACTGTCAAGTGCTACTGCTACTAGTACTGTT
GAACTTTCCGGAAACAAAAGATTATTGCGAGTACTTAAATAGCACGCTGC
GTTAAAGCAGTGCACTTTTGTAGCTAGGAACAAGCGGCAGCCTAATTTAA
GTGCCTAACTATGTACGTGTAGTACATGCATGCAAAGTTGCAAACACGAA
GCATGATCGAGCAGATTCATTCAGTAATACTCCTAGAGTAGCTTCAGTCA
GTGTGTACATATATATGTGATGCATGCGGGAGAGACGGGCAGCTAAGATG
GTTAAGCGAAACCGGACTTAAAATCACAACTTTTATATATGTGTTACACT
AATAACTAGCAGATTCATCGATCGAGACTAGTAATATATATGGACTATTC
GACCCAACCAAAATAAATATGGCCACAATTACCATTAATACTAGTATGGA
GTATGATATCATCAAGCCATTTAGGCTCTAGGTTCTAGCCAAATTTCGAA
TTTTTCATCGAGCAAACACAAAAGCTTGGGTTTCGATGCATTAACAACAA
AATAAATTTATGTACAAGTTCACGAAAATACTACAACCGAAATAACAACA
CGACGCCGCCTAAGCACTAGGTTCTACCTTTAGCAGGCACACGACTTCGC
TCGCTCCCTCACTTGCACCCTCATTGGGGCCTCTGCCTGGATTGTGTGAA
GAAGGTGAGCGACATTGGATAGGCTACGCGTCATCTACGATGATCGTGTT
GCGCTCCTTCCAAATTTACCAAGGAGTGAGCATGATCAACAAAAAGGTGC
CATTTTCATAGCGACATTTCAGATAGAGTGGACGGTATGTAGCCACTAGT
CCATAAAGCAGTGGCGGAGCAAGCAGGGAGGTGGCCCACCCTAAGATTTG
GTCTAGCCCATATGTGATATATATAGAAAATAAGAAAGAAAGAAAAAGCC
CAGCTCAAGTTAGGTTTGCCTCACTCTAGTAAAATGGGCTCGATTCGCCA
CTGCCACGAAGCTATCCCTCGCGTCGAGCGTCGTGGTGGTGGATGTGATC
CAGGAGAGCACCCCCGAACCACCGGATGCGTGAGAACAAGAAGCCTGTGA
GCCTTTATCTCCTTTCCCTATTAGTAAAACATACTATTGTGTGTATGTTA
GAGGACCTGCGTCGTGAGGCGGTCTGCGGTCCAACATCGTCCTTGACAGC
TAGATGAAGAATTTCATATAGCATAGCTCATGACTTCCAATTGAATTTCA
AGGACCTTAATCTAATTGAGTTCTCAGAGATGGCACGGTAGCAAGACTTA
AAAGAGTACTGGCCGTTTCACGTCTAACGTCACTAAAGAATGTATGCCGT
CGCCGTGAGGTGCAGACCATTTGATGGCCCTCCAAAGTTGTATGTACTAC
AACATGGCCAGTGGGCTCAAGCCCACTAGGATATTTGAGATCGAATGTCC
GAAAACGAGAATCACCGGGCGCTATGGCGCCCGGCCCTAATCTCCACCGC
CCATCCCGGGAAAGATTCCAGCTGCTAAACTTCTAAACTTATCCCTCCCA
AACTTGGAAATTAACCCGCAATCCGATACTTACAGGCGAAGCTAGAGAGA
CTTACAAATTTGTCCCTTCACAATTTTGTAATTAACTCGCGGACCACATA
ATTACAAAAGCAACAATAAAATCTTTCCAATCTTACGGACGGTGGAGAAC
CCGCGTTTTCTAATGCCTGTCAATAAATGGCCCGGCGGAGATTACAATGT
TTCCGAGCGCGCCCACATACCAACAAGAGAAGATTCGGCGCAATCTCCGG
AACAGTTGAACCGTCCAACCATTGGTCCTCCTAGAGGACAGCGGATGTTA
CGCTAAAGGCGAAGCGCGGTTTCCACAAGAAAGGGGAAATAACTTCATGC
ACACTATGGGTTATAAAAATTGACAACAAGTAATAATTCGCCAAAGAATG
TGACCGTTTCTGCCTTGTGCACAAATGACAACTATTCTCGAAATGCAAAA
CCCTTATCAGAGGCCGACCAAGGGTTCAAACTAGCTAAATGGTTCTAGAA
AAGATAAGTGTAGTAAAGGTTTAATATATATATAGACAGTTCATATGTCA
AAAAAAAGCTCAACTCGGATTAACAAACAGAGTTAAGGAAAATGTGTTCT
TTCCAACAAAAATAAAAGAATAATCATAACCTAACTGAAGGAACTGACTA
AACACACGCCTAGCTAGCATCAAGGGAGAACACATATTAACCTAGCCCCT
CTACAGTCTCGGGCAAAATAAAAGACAAGGAAAGGAATAACTTTCTTGCC
AGAAATATCTGCTGGCTAGCCTGAGAACAGTCTCTGATTTGTATCTTCCC
CACCCCAGCAAAGAAAAAGAAAGAAAAAAAAAAAGTCAAGTGGCCTACCA
CACAAGCTTCCCCGGCCCGCGCGCGGTCAGTTTAATTTGCAACCCCCACT
CTCCCCCCGCTCCAGCAGTAGCTGTCACCAGCACTGCTGGCAAGATATGG
CGAATAAAAGCTGCAGATGACCACAATTAATCAGTAAATTAATGTCCCTA
ATCGCGCCTAAATATTATGTATGGGGCGTGATTAATGAAACCGAGTGAAG
AGTTCCTTCCTAGGCAAGGCTTTGTTGGACCTGGCCCCTGCCAAGCCATG
GAAAGGGTCTCTGGATCCATTATAAAAGTTGGCCTCGGCTCCCCCTCATC
ATCCCCTTTCTATCCTATTTCCAATCTTCTTCACACCTAGCCTTCTTCCT
TCCTGTGCGCCGGAGAAGAAAGCTTATCTTCTTCGATCTCAGCAAGCAAG
CATGGAGGAGATCATGGCAGCATGGTCGTCCGAGCAAGGCGGGGGCGACG
ACGGCGGCCTGTTCCTGCCTCCCGGGTTCAGGTTCCACCCGACGGACGAG
GAGATCATCATCAGCTACCTCCTCCGCAAGTTCCTCAACCCTAGCTTCGC
TAACTGCGCCGTCGGCGAGGTCGACCTCAACAGCTGCGAGCCACGAGATC
TCCCAGGTAAACTAGTTCATCCACTTCTTCTTCTTCATCTTCTTCTCCTT
CATGTTGAACATCAACTTGCTGATGATAACTAACCGTGTTGAATTATTAT
GTGAGAAGGCAAGGCGAAGATGGAGGAGGAGTGGTACTTCTTCGTGCACA
AGGATCTCAAGTACCCGACGGGGAGTCGGGCCAACCGCGCCACTAGGGAG
GGATACTGGAAGGCCACCGGCAAAGACAGGGAGATCATCTTCAAGTCCAG
CGGCGAGCTCGTGGGGATGAAGAAGACGCTGGTCTTCTACACGGGCAGGG
CGCCCAGGGGCGCCAAGTCCGACTGGGTCATGCACGAGTTCCGCCTCGAG
GGCAAATACAGGGACAAAAACATGAACGATCCCAAGGTATATCTACTACT
CGATCTCATTTGATTATGAACAATCTTAATTAGGTATGGATTAACTTCTG
GACATGAATTCGGCCGGAGCGCGTGAATTGATTCGATTATTTTGTGCGTG
TGTGCCTTTTGCTCTTGTTCGGCGGCGCCAGGACGAATGGGTCGTGTGCA
AGGTGTTCAACAAGAAGAAGGACGCCAAGACGACGACCAAGATCGAGACC
GCTGCCGCCGCCGCCGCCGCCTCGGCCGACGTCGAGGGTTCCTACTCCGC
CGTGACCACGCCGAACGCTAGCTCGGTCGAGGTCGAGGGGGAAGAGGGCA
CCGGAGACTTCATCGACTCCATCTTCAGCACCGACCCGCTCTACTTCACC
AACTCCGACGAGTACACAGGCAACCAGATGCCGACGACCAAGGAGACGAC
CACCGTCACCACCAACACCAACACCAACACCAACGCTGATGCGCCGCCGT
ATATTGCGGACTTCTACTATACCGTTCCTCCTACAGCTGGAACCTTCAAC
GCCATGCCTAACTACAGCTTGACCAACGCGCCAAGCAACATGCAGGCGGT
GACCGCCGACACCATGGCCAGCTCAGTCCAGGCAATAACGGGCGACAGTG
ACCTCGGTTACTCCTGGCAGCAGCAGCACATGCTTAATACGCCGCCGCAT
GAGATGGGACGAAAAAGAAGCTACGACAGCAACCTCCGTGAGCAGCAGGC
GATCATGATGGTAGCTCTAGAAGGGGTCATTGGCTCCACAAACTTTGGTG
CACCGGAGACGGATCTGCCGCCGCCGCAGAAGATGATGAAGCTTGGGAGC
TACGACGTCGTCGACGGAGAATTCCCCTATGGAAATTATGCTGCTGCCAC
CATGAATGGACAACCATCTGCTGCTCAGAATTTTGGTGCTTGGCCATACT
GATACTGATCGAAGAATGTGCACTGATTTATTTAGTCCTGTGGCAGTTTT
GTTGGTTGCTTCATTGTTAGATTTGCTGATTACAGGGAGATAGTGAGAGA
TATACTGTTCATTGATTTCAAGATTTTGTAAGAAAGGACATAAGGCCGTT
TGTTGTGAGCTAATTATT

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