Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA044070

[Submit comment/correction]

Sequence	AA044070
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA044070
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGATGATCGGTGAAATGGATGTGGGGAGGGTTGTTGGATACTTCAGGGG CAAGAGCATCCTCATCACCGGTTCAACTGGGTTCCTAGGAAAAGGTATTA CGGGTTCAGCATGATCTCAATGGTTTGTGCTGAGCATCTGTCAGGCTTAT ATGTTGTTGTTTGGTTTCCTGGTAGTGCTCGTGGAGAAGATATTACGGGT TCAGCCTGATGTCAAGAAACTTCTTCTCTTGATTCGGGCCAACGATGTTG AGTCTGCCAAGCTTCGGATTCAGAGCGAGGTGAAGAATTTCTTTATAGCT TTTATTCCATCAGTGCATACGCTATCCACAATACGACACAATTTTAAACC TAACCCAACTCATACATAATATTCGACACAAACTCAAAAAACTCTAACTT GGCAAATATTCGTCGCCACCTTGAATTCGTCAAAGCGTGGAACCTCTGTG TATCTTGGACTTGTATCATGCGTTGCTATTCCTAGCTCCATGTGACTCCA CCTGCAACTATAGTCCCTTCGTTCAACACAATAACACACCTGATCTGCAT GAAATTGCTGCCAACATTCAAGGAATTTCACTGCCGTCCTTGAATCACAC CGAGTCAAATTCACAGCGCATCATCCTTTTCGGATAGTCTTCTTCATGTC CCACACCTACATCACTCTGTCTTCTTCTGCATCACGTAAACTGCACTTTG ACATGTAAACTGAACATCACATAATATACGACCATGTGCTCTATAAGATT TTGACATCTAGATTTTCCAAAACACTCTCTCAGATTCCCCATGGCCGACT CTTGTCCATCACTTGACGTCGATCTCGATAGACCCGGTCACCAACTTGAA CCTGGTACCCGTCAACACTACTCCAACACCCTTGCACACTTGTTAGACCA ACCTTCCCGACCTCTAGCCCCCGCTCCGTCGCTGTGTCACGTGCTTTCTG CATGCCTTACCGCTCTCACCATGTTGAGCATCCAAAATCTTGGCCAAGAT CTACTAGGTAGCTAACCCACACCACCTTAGGCCCTACTACAGATCCATCA GTTGTATCCGACCGATGCTGAGTTCCGCGCCTCCCACGGACCACTGGGCT CTAGCCCGGACCACATGCTTCTCGTCTTCCCGCTAACTAGGCTTCAATTC TCCGGATCCTTACACCGTAGCCCCTCCATCAGAAGAGTGGAATATTCTAT CAGATTCCAGATCCACCTTCCGTATGACTCCACGATAGATGATCAGTTCA CCCCGCACCTTACTGACTTCAAGCTTCCACGTGTACCCCTTCTTGAATCA ACTCCGCGCCATTGTTGATGCACACGCCGCCCTTAGACATGTGCCACGTG TTTCCACATCACATAATTCAGACACCATGAACCCTCATGCTCCTACATCG TTGTCACCGATCTTCACCATATTTTGTTGTCAGACTATCCAATCCAGCAT AACCAAACGTATATGTATCCGACTGCAACCATGCTCCACCCTACACTGTA TCAGCTTAACAACCATGTGCATTGCTCAACATCCTTTTGGTGCATGATCC TGACGACCTACTCTAGGCTACTCCGAGCTTTATGCCACATCACCATCCCA CAGAATTTCTGGTACAAACTTTCCTTGAACAACTATAGCTTTGACCGCAA TTATCTATATCCGTGTAGCCTTTTTCGTGTGCGTCTAGCAAACCGATCAA ATACCTAATACAGAGTACTACCTCCGTAAGAGATTATAAGACCTTTCATA ATGGAGCGAATCTTAGCTCGTTATCATAGACAATGATGTATCTTAAAAGA CAATACATGGTGTTGTATTTTTAAGAGTTGTATTTACATTTAATTTTTTA TATATGTATTTATGTGACTGGGCTAAGCATGTATTTTGCCTATGGTTGCG TGCAAAACTTGTATCTAAGCTAAGATACCACGACACCTTCTTTCTTCATT AAATATAGTGCCATGTAAGCAATTTTTCTATTATACAGTGCTAAGAAACA TCCATTAAAAAAGGCCTAAGACCAAAGAGCATTCTAAATAGAAATTATAA GTCTATCTCATTTATCTCTCTTACCTTCAATGCATTTTTTTTTTCTGTCA TGTAGAAGTATGGACTTTCTGAGTCCTAGCGAATTGGCCCATAGGCCTAA TAATCTCTAACAGAGAGTAGACCTCACCATACTTACGCCATGCACCAGAT TTTGCTCTATGCATGCAGCTGCAAGAACATAACCAATACTCTCTCATCTT TTTTTTAAGCATACCAGTACTCACATCGGTCATCGGGACCTCTGTTTTCC ACAATCTCATGCAAGCCTGCTAGCCTCGGCCTGGTCCACACCAACGGTAC ATCCAGCCTTTTGGGCCTCGTCCCGTGTGCCTGATCGCCACGCGTCTCAC CACGTCCAACTCGCCAGGTCGATATCGATGTGCATGCCGCATGCGCCGCT TCTGCTTGTCCTGCGGGCCAACTCCGAGAGTTGCCTCCTGCTGCCACGCT GTCTCTGTTGCTCCCGCGCGAGCACACTGCTGGACCTTGGCCGCGACAAG CGCCGTCTGCACGCGCTTTCTCAATCAGATCAATCCGATCTCTTGGATGA TTTGACGTACGTGCGATCGATCTCGCCGAGTACACATGCCGCCGTGACGA TCCTATAAGCAGCATGCTTTGCTTCGGCCGCCGTTCAATTCCGTCGCCGT CATAGCTTCCTCGACGAATTCCGCAGCCCCTCTAAATCAACTTCGTCCCG AGCCTTCAAACAATGTCGTAGGGGTCAAATTGAACTACCGAGGACAGCAT AATGACAACGCTAAGATTTGTTAATATAGTCCGTCCGTCGAACGAGCTAG TCTACTCGGCGGGAGCATGACTATGGGCGCTAGTGACCTCTCCGGTAAAT TGGGGCCCCGGTACGAAATACATAATAGGGCTCCAAAATTGGAATGAGTT GCCCAAGCCCCAAAACTATGTGTGCAGATTAAATATTTTAAAATTTTGTA TGTTTTCCGGGGCTAACATGAATTATTTTAAAAAAAAAACAACTAGGCAA AAGCTTTGTCGATCTTTATATTGATAAAGAAAGAACAGACAAGGGGTGGC CTCGGCCATATATATAAAGATAAAAGAAATACAATAAACTTGTTCTTCCG CCTAAGACCATGCACTATGTTGAGCCGAATCAAAAAATATATGCCAGACT TTGGACCCGTGGCCATTGTGCTTATGGAATCGCCTTGCATGTTGGCCTAT ACATAGAAGGTACATACATGCAGCTTTTCTTTTCCCATTATTCTCTCTAT GCCATGTGGGCCACGCTTGCATGTTGGTTGCTTTAAATAGAACCAATTTG TTGGTTCGCTTTTGTTGTCAGACTTGATAGTGCGATGCCATGCTATGTGC AGAATCGGTTCAGAGACCCCTTTGAATCGCTTTAAACATATATAGTACAT GGTCTAACTCATTATTTTAAAATTTTATGTGTTTTTCGGAGCTAACATAA TCAAGCTAGTTGAAAATCGTACACTAACCTAGAGGATCGACATATGATTT TTATAGAAGAACTTAACCACCGGAATATAAATGTATATACTAGTTATACT ACTCGCAAGTATAGGTTGTTCCTTCCCACGGGGTTGCTGTACTGCCGCTT CTTGCCTACATCTCCTTCCTTCTGGTCCGGCCGGCCTCTCAATGTTTGCT ATGGGGAGACGACAATGGTGTCCTCAAGACTGTCTTGGTGCATGTTGGTG GGTGGCAAGATTTGTGGAACCCCTCTGGACTGGTCAGGTGGTAAGTTCTG GGGGTCGGGAGAAATTCATGTCGGTGTCGTTGGCACCGACATCGTGACGT CTGCGGGCTCCATCTTTCTTGTGTAGGGCGTCCGGTGTACCCCCTCCCAT TCCCCTCCGTGCACCGGGAGAAATCCTAGGACTTGTCCGGGCAGCAGCGT CGTCGTCGTCGCTCCCTTTCTTGAAGGTGTTGATTGGTATACGACGATCC GAAATCATAGGAGTATGGTGGGAATCCTCCAGAGGGCACATAGGTTGAGA GTCATCAACGCTTTTGTCGATTCGGCGTTGTCAGCATTTATTTCTCTTGC CTTTCCTTTTGGGCTTAGTTGTGCTGTCTGTTCCAGCAGTGATCTCGTGT TTGTACCTGTTTGCGTTGGTTGTTATATTAATATAGCGGGGCGAAAGCCT GATTCGAGGGTAAGTATAAGTAGAGTGAAACATGTGCCTGATATTACTAG TTATATTCCACCAAAGAATCAACATTTTCTCAGAGATCGCCACATGCCCG ATACCACATCAAAATATTAGATCTTGGATGCGGCACTTCCACATCAGATC TTCCGGTCAGCCCCTAGCCCGTGCATCAAGATGTCGGCTCGTGCGCAGTA GCCTTCCGCCCGGTGGCGTTTCCCATTGAGTCGGCTCTTGTGGTTTTGCT GGGTCTGGGTCTCATGCATGAAAGCGGGTCTGTTGAGTCCCACATCACCT CTAGTTAAGGAGAACCAGTATACCCCTTTATAAGATTTGGGGCTCCTAAA TTTTGAGCGTCCTGTGCGGTCGCCCACCTCGCACACCCTCATGGATGGCG GTCCTCCCCTTTGACACCGTTGCACTAGCCACTTTGGGCGCCGAAACAAG CCATCAGCTCCCCTTGCACCCCCACAACTATCACGACATCATAGGTTGCA TTGTGTAATGTGTTTTTTTTCGAAATGGGGAGCGTGGCTCCGGCCTCTGC ATCCTCGGATGCACACATCCCTTTATTAAAAGTTCAGGTCTCAAGTATCA AATATGAAATTATTACAACTCATGACTAAAAAGAGATGAATACAAAATCC ATCTCTCGAAGAAAGCTAAAAAGTGGAAGCACATATAGCAGCTAGATATC TCTCAATCTACTAATATGATGCCATGAAGCTTGGCTGTAGATATTCGAAG CGACAGTCACAAGACAAATACACCCAGAAACCATGGGTTGTCCGTGATTC TCTTGGAGAAGGAAAGCCCAGAGCTAAATCCATTATGACACCGTGTGGAT AACCTGCAAAAAACTAAAACTTTGGCCTTGTTAAAATAATACTATTTCGA CACTTCCAAAAGGACCAACCAATACGAATTCTAGATTTATTTGCTCTATC CATCCCATTAAGACAATTTCCACACATATTAGAAATACTGGTTGGGGTGA AGGATTATAAGTAAAAAAGACAATACTCCATATAATTTTTGCAAAAGGAA AGATATAAAAGGATGTTCTACTGTTTCGTCCTCATCATAGTAACAACAAT TTTTACATCCTCCTTGAAATAGGATTTCACCCCGCTTTATAAATAAAGCC ACATCGGCCGAACTGATTCAAGGTAATGGGAAGACCCCCTAACAAAGCAG ATCAAGGTAAACAAGAAAAGCACAAAAGACCACAACTTTCCACCAAGGAC AACCACCCGAGAGCAGGGAGAATTGGGGCTCCACAACGACGCCCCCAGGA GGGTAACGACGCACTACACCGCCGCCGCCGAGACCAATGGTCAAGGGTTT TCACCCGAAGCCTTTTTGCGGAGAAGGTAGCCGCAGCGGTGCCCCAAGAG GGTAACGATACCAGCAGGCATCGCCGTCGCTGGTGCAGAAGCACGGACCT TCCGCTTGGAAAAACATTTTTTTACATCCATTCCAATGTCTCTTTATAAG ATTGTCCTTATTTAATATCACTTTATGATTAAGAAACCACATACATATTT TTATTTTAAGTGGTATCTTGAGCTGCCATAGATATCTTTTTGGGAATTTT GGATGACCATTCATAAGGTCTTCATACATCGATTTTATGGTGAATGTCCC ATTATTTGTTAACCTCCATTAAAAAGAATCTAGTTCATTTGTCAAGTTAA GTTGCATCAACAATTGACAGAGGTGCACCCATGCATCCCATTATTCCTAG TTAAACTCCGTCTGAAACCAATATTAAGAGGAGTCTAAGATAAAATGGTA CGAATAGAAACATTTTTCTATGGGTTATGTTATATAAATAAGGATATTGG TTAGCAAGAGATCTCTCTCATAGCCAAACATCCTCTCAAAACCTGATACA CTTCCCATTACCGATCTTGAAAAGGCCCCAAGAAAAGAACTCTCCTTTGA CTCTCATCAGACCTTTCCAAAATAATGAATCAGTAGGTTTAACTTTAACC TGAGCTAGAGTTTTATCTTTTAAGTATTTATTGTGCAACAATTCTTGCCA TACACCCTCCTCTGTGAGTAACTTATATAACCATTTACTAAGTGTCTGAC TCCAATACAGCGCATATCCTATCAACATTACAACATAAGTTCAAACTTAA TGCAACCCATACATAATATTCAACAAACACAACAAAATAGATGTACAACG TAGGACGAAACTAAATGGCAGCTGAGTTGTATCCAATAATGGTCTTGACA ATAAAATAAACAAAATTAAAGGTAAGCCTCTCTATGCTAGGTTTTCAATA TCCAGTAAATCGTCAATGCGATTAGCGGCGTTTCATCTCCGTAGAATACT TCCTCCCGAGTGAGTAATTTACAAACACCGTTTTGGTATTTTTTTACAGG TTATAGGGACGGATCTCTTTCGAGTACTGAAAGTAAAACATGGTGTGGCA TTCGATTCTTTCATTGAAGAAAAGGTATGTCCTTTGGTAGGAGATATCAT GTATGAGAACTTTGGACTAGACATTATCAAGCTGAGAGAATTGTCCAAGG ACATCGATATCATTGTAAACGGAGCGGCGACAACGAATTTCTATGAAAGG TTTGAGATTTTTCCTGGTTGCAGATCACTGAATGACATTATGACAACTTA TATGCCATTGAAATAAATTGGTGAAAATGTGGTGCATTTTCAGATACGAC GTAGCTTTCGACGTGAATGTCTTGGGAGTGAAGCATGTCTGTGCATTTGC AAATAAGTGTACTAAACTTAAGATGTTACTTCATGTTTCAACTGGTGCGA ATTATATAGAGTACTATATTTGTTGTGGTTGGTGCCATGCCATTCTGAAC TGTAACTCAGAAGTCATCTTATAACTTGGACAGCCTATGTAGCGGGTGAA CAGAAGGGACTAATACCAGAGAAGCCATTCTTGATGGGTGAGACACTAAA GGTGGGCACACATTTGGACATCGAATCCGAAAAAAATCTGATTAAACAGA CCAGGATAGAACTACAGGCTAACTGTTGCACAGAGAAGGCTGAGAAGAAA ACCATGAAGGAGCTTGGTCTCAAGAGGTCAGACACGAACAACTTATCAGA AAAAAATGCATATACTTATGCACGCGTGTACTCTTTCTACCACTAGCAAA ACCGTAGAACTGATACATTTGTTACATGCTTTATCTTATGCTGAATGAAG GGCGCGGTACTTTGGGTGGCCAAACACATATGTCTTCACCAAAGCAATGG GGGAGATGATGTTAGGGCACCTTCAAGGTGGCTTTCCGGTGGTTATCATC CGCCCGAGCATCATAACCAGTACCCTCAAGGACCCATTGCCTGGATGGAT GGAAGGAATCAGGTAATCTATTCCTTGCTTCGTCAAGATAGTGTAGGGCA GTTGCTAACCCCCACCCAGAATGATCACTGAACATGTTTGTTTTTGGCAG GACAATCGACACTGTGATTATAGGTTACGCCAAACAGACTTTTTCATTCT TCCTAGTCGACAATGAATCAATAATGGACGTGGTGAGTTTATTCACAAGT TGACAACAAAAGTTTGCAATGAACTTAAACAAGGTACCACGTAACTATCT GTGGTGTGGTCCTCGTTATTGGTCGTTTGGACAGATTCCCGGGGATATGG TTGTGAACGCCATGATGGTTACCATGGCAGCACACTTGGAGGAGCAAGTG CAGGTCATCTACCATGTAACTTCGTCGGTACGCAACCCAGCACCCTACGC CATCCTCGCGGAGTCAGCCCACCGATACTTCCTCGACAACCCGCCGTGTA CAGGGAGGAATGCCGAGCGTGTCTGGCTGAAGAAGATGAGATTCTTTGGC ACACTCGGGCGGTTAAGATTGTACATGGCTATCAAGTACAAGCTTCCCCT TGAGGTTAATTAGTTAGCTTACCTTTTAAATATGAGAGATACGCACGTAT GTTGATTTCGCCGACGTGATAAGAATGAGATTGATATTATGTGCTTCTTC CAACGATTGGACAGATGCTTCACCTAGTGAATATTGCACTTTGTGGTGTT TTCTCAAGGCGCTATAACGAACTCAGCAGAAAATACAAATTCTTCATGCA GCTGATCGAGCTCTACGCGCCATATACCTTGTTCAAAGGGTGGTAAGAAA CTTTAAAACCTTATCAATGTCCTTCTATTACATACTCATTTGCGCAAGCA CACACGTCCTTCCCTTGAAATGTCAATCTTTAACTTGTTTTTATTAATCT TGTTAAGCTTTGATGATGCAAACTTGGAGAAACTAAGGATGGCGATGAGC AAAGATCAATATAACAGTGGAGTCAATTACTTTAATTTCGACCCCAAATC TATTGACTGGGACGACTATTTCTACCGTATTCACATCCCGGGTGTGCTCA GACATGCGTCACTGAGTTATATTTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.