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GrainGenes Sequence Report: AA027970

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Sequence
AA027970
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA027970
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCCATTCAATATAAGCAGTTAGTACACTACTAGTAGTTCTAGTATAAACT
GCCGTACTCGATCGAGCACGGAAAGGAACATCTCACAAATCACCTACCAC
ACAGAATGGAAGGCGCAGCGCAGACAATTTTGAGCAATGCTGGGCAGTTA
GTGGGGGGGCAGTATCGGCTGCTCCGCTCCGTTGGCGGCGAGGTCGCCGA
GCTGAGGGACGAGCTGGCGACCATGAACGCCCTCCTCCGTATGCAGACAG
AAGTCGAAGACGGTGCCGTGGACCACTTCGTCCGGGAGTGGATGAAACAG
CTCCGTGAGCTCGCCTACGATGCTGAGGACTGCATCGACCTTTACATATT
CCGCATCAAGTGCGGGCTGAAACTCGGCGTCTACATCTGGTGCAAGCGCC
AGCTTGAGAGGCTTTTACCTCGCCATCGTCTCGCCGGGGAGATGAGGGCT
CTGCGAGCCCGTGCTGTGGCAATCAGCGAGCGCCATGCTCGTTACGGCGT
TAGCCGCGATGCACTGATGATGAGCCGCTCTCGTCCATTAGCTCTTGTGC
CGGTGCTGGGGGCATCCGCGCACGCTCTCCGCCCTACCAACGACCCTGAC
CAGTTGGTTGGCATCAGAGCACAGGCTATCGACCTGGCCAACAAGGTGAA
GGAGGTGACTGACAAAGAGCGCGACATGAAGCTGAAGGTGTTCTCTATCG
TCGGGTTTGGAGGGCTTGGAAAAACTACGCTTGCCATGGAGGTGTGCCGG
CAGCTGGAGACGGACTTCGACCGCCAAGCAAACGTGTCCGTGTCTCAGGC
CTTCGATGGCGGGAAGGACCTGCAGGTGCTGCTCAAACACGTGCTTCGCC
AGGTTGCCAAGGCGAAATCACAAAACGATAAAGGCATCAATGAAGAGGTG
AACGATTCGCTGGGTGAGATTGACACTATGGATGTTGATCAACTTGCTAC
CAGGCTCAAGGAATTTCTCGACGACAAGAGGTAAACATGTGTCATCATTA
GCACTTCTTCAACATAATATCTGCGATTTTAATACGTTGCATAATTATTA
TTTCGGACTGTATTGCCATATAATATGAAATACTCCCTCCGTCCCAAAAA
GGTTGTCACAAGTTTGCATAGGTTCGCATGTATCATCTATACACACCAAA
GCACGTCTAGATTTTTCGATAAAGAAAATTTTACTACTTAAAGAATTTTA
AGCATTACACCAACAAAGATGCACACAGCCGATCTAAATCCAGCCAATTT
ATTGGCTAATTCGAATTCGTATGTGATTCGAGAAAAAAATAACTAGAAAA
GATGAATTACATATCATAATGAGAAAATGTAAAAATGCCTAAGACGACAG
AGGGCTTATCCCGAGATTATACTGACAACCATGATAGGTAAATAAAATCT
TCGCCGTATCCTACGGTCGAGTACGCACCCTCGTAAACAGGTTGTGAAAC
TTCGCACGGTGTAGCAAGGACTAAATGTGGAGTGTGTACCTATACAACAC
CAGTAGATAACCCCTAAAAGTGATGATTTTTTTTGTTAAACACTTTATTA
TTTATACATAGACATAGCGACCAAATTAATGCAATCGCTCCCACCCTAAG
AACCATGCAGCCAATTTCAAATATATTGGTGATACTACTGAGTGGATACA
AGCCCGATGTTGTTTGTATGACTGACCATATAGAACAAAAAAAATTGTAT
TGGAAGAAAAGATGTTTGATTGTCTCATCACGATGACAGAAAACACATGT
TTTACTTCCGTGCCAATTTTGCTCAGCAAGATTGTATTTAGTAAAATTAA
TTTCTCGACGAAAATACCAATCAAAGATTTTTTCTTAAGAGGTATCTTTA
TCTTATTATTATCAAATGGTAAATCAGACTAGATCAGTGCATTGTAGAAG
CAACTAAGGATTCACCATTCTCAAGTAGGTTCCAACGAAATTCATCGTGG
CCAGGTGTTAGTTATTTTTAGATGACCAAGTGTTAGTTGGATAGAAGCCA
AACATGAAACAAGGCTTGCCAAGAAACAAGTCTAGAACCAAATAAATTTC
TCATGAACATCATATTCGGTGGGAAAGACCCCAAAACAGTGACAATGGTA
TCGCTCTTGTGACGTACAATATCGTAAGAGCAGGATACTATTCTCGGAGT
GTAGCGTTACCTAACTACCCGTCCTCCCAGAACTAGATTTTAGAACCGTC
CTTAATTGAAAAGGATCCAAAGCAGAAGAAATATTTCTCTACCATCTTTA
GACCAGCCCAAATACACATCACCCGGTTAGGAAAATATTTCGAGCCAACA
TATTTCCGTTTAAGGAGGTTCATCCATACCCCATCTTCAATAAGAAACTT
GAAGATCCATTTACCTAGGAGGGCTCTATTTTTTAACACATCTAGGTACA
TGTGAATGTAGACAAATCTATGGCATCCTTTTTAGGATGGAGGGAGTACA
ATTAATTATTCACTTGCAATAGTTTCCATTTCCCATTTCATTAATTTAAC
TCGTATTTAACAAATACTTTCTTATTTTCTCTGTCCATATTGAAAGATCG
GTATAATCGACTAGAGGGAGGGGGGGGGTGAATTGACGCTACTCAATTTT
TATTTCCTTTTTCAAATTAAGGCAAGTATAAGCAACTAGATCGATATAAG
CGACTAGATATGCAACTAAGTGAGAGAACCTATATGACAAGCAAGCAAGC
AACAATAATACTAAGGAGTAAAGTCACCGAGAGTAGACACGGAGATGTTA
TCCCAAAGTTCCTTCCTTTTAAGAGGAAGTACGTCTCCGTTGGAGGAGTG
GGCGGTACTAAGACCACCATCGCCATAAAAGGCATCACCCTATTCTCTCG
CGCACCCGCCTTGCGGAAAGCACATGATCCACTATACGGTGGCCTTCAAG
GTGGCGACTGAAACCTTGTACAAAACCTTGGGGCACTTCTCCACAATTGA
ATTGGAGGCTCCCAAGACGACCTCGAAGCTCTTACACACGATGATGAGCT
ATGGAGGGCGATTTTTCAAGTTAGGGTTTCCTCAAACCCTAGGGCAATAA
CAACTTACACAACTGGTGGGGAAACACAAATCCCTTTGGTGGAAAGCTAG
GTCTAGGTCTCCTCCCTTGATTTCCGAGGGGCATCAAGTTCTAGTGGCTA
GGGAGGGAGAACTAGGAGGTTGAAGTTCAACAACAATAGAGGAGAGAGAG
TAGAAGCCACAATCTTCACTTGGGGAAGAAGGGGGTATAAATACCCCCCC
CCCCAAAAAAAAATAGAGCCATTGCATAAGCACTAACCCTGGAGTTTGTG
GCCAGGGCCAGAGTCTCCGGGGTGGAGGCAAGAATCCGGTCATGTCTCCA
GGGGGGGGGGGGGGGTATACTGAGAGCAGAACAGGGAGCCCCGGAGACTG
GGCTAGAGACATGACCGGAGTCTCCGGGGTGAGGCTCGACTCCGGGCATC
TCTCCGGTGGGGTTGTACTGAGAGAAATCCTGGGAGGGCCGAAGATAGGC
CCGGAGAGCAGGGAAGAGTCTCCGGCCTGGCACACCGGAGCCTCCGGTGC
TGGACCCCGGAGTGTCCAGACCTAGGAGCTCCTGACTCCATATTCCATTC
CAAGCGGCTAGCCTGTTTCTGGGTAGATTTTGAACCCTTATCCATTGGTA
GACAGAACACGGTCTTGTTCCTTTACACGTATAAAACCTGCAACACACTT
ACGGTAAAAACTTACTTGTGTTGACAACAAACACCAAAATATTGTTAAGA
CAGGAAATGCCCTTTCACATGTGTCAAGATACATGCGAGTCTAGATTTGC
TTATGTGCAAAATGTTTCATGTTAACTGCAATCCTTACACGTGATTGTCA
TGGCAAAGGCATGGCGGTCCTTCCTGATAGAGAGAATAATTGACCACAAT
CTTGGATTTTCTGCTATCTCATATTTATAGAAAAATTATGGAAACAATCA
ATACTAATCCTAATCATAATGGCATGATTATATGCAAGATATCAAGCGCA
TGGTATAGAAGGGTATAACCGAATATAAAGTCGGGTTCCTAACATCCCCG
TAGTCGCAACGGGTCATTCTCGGATGTTGAGACTGGATCGGAAGTCCAAG
AATAATGGCGATGGCAGGACTTTGGTGAAGATATCCGCAAACTGTCGAGA
AGAAGGCACATGAAGAACTCGAATGTACCCAAGCGCCAAAAGATCACGAA
CGAAGTGAAAATCGATCTCGATGTGTTTGCTACATGGATTCTGAATAGGA
TTCATGGACATTTATAAGGCGTTGACGTTGTCATTGGAGACAACCGTAGC
ACTGAGAAGAGGTCAATGAAGCTCCTGAATAAGTTGGCGAAGTGCCGAGC
GAGAGACAATGTGCTCTTGGTTAGAGGACAATGTTTCAAGATTGTCACCA
AGGAACATGCAGTAGCCGAAGGTGGCGAGACGAGTGTTGGGACAACCATC
CCAATCCACAATGGTGTAGGCCACAAGGCGGTTCATGGGGTATAGCTCAA
GCTGAAGTCCATTCAGCAGGTTGCCCTTAACATTGCGAAGAACACACTTG
ATCAAGGACAAGTGCTGATCACGGGCATCATGCATGTGGAGACAAATCTG
TTGTACAATGTAGGCAATGTCAGGATGTGTAAATGTTAGGTAATATAGAG
CACCTGTGATACTCCGATAAGCTAAAGGATCATCAACCGGAGGACCAGCA
ACTGAAGCGAGTTTCAGAGATGTATCCGCTGGTGTCAATTCAAGGTGGTA
GGATATCATGCCAACACGCTCGAGAATCTCGAGAGTGTACTAGGTCTATG
AGAGAATCATACCCTGTGAGTCACGTCCAACGACAAGGCCGAGGAAGCGA
TGGAGATCGCCCAAGTCAGTCATAGCAAACTAGAACTGAGAGTGGTGATG
ATGCAATCAAGCAGTGTCGAGGAAGAAACCGTGATGATGATGTCGTCAAT
GCAGAGGAGCAAGTAAGTCGTACCATGAAGTATTAAGAGCGAGGTGTAGG
ACTTCGATCAAGTGAAGACAAAGGTGGTAATGAAGGTCGCAAAGCGACGG
TATTACACATGTTGGTATTTCTTTAGTCCATAGAGGACTCGGTTAAGGCA
GAACACATGGTCATGTCGTGGGAGTCAAAGAAGCTAGTAGGCTGGTGACA
GATGTGAATGGGTTCTATGGGAGAAAACAAAAAAATGCTACTACGAGAAC
GCACCAACCCAAAATCTATCTATGGATAAGTATAATAATGAGCAAGATAC
GATATTCATACATTTAAAGACCGGACGCCATATTATGCTCCTGCACAAAT
GTTGCTAGTGAATCTGGGTGTAACAGACCTTGGGGTATAGAAGGCTTCAA
GCGTCCATCACCACTAATGGCAGTGCCTTGTCGAGTTTTACACACGTCCG
GTGTAAAAGATGTCTCCAGGGCCCCGGTCCAGCGAGGGAGCGGAAGAAGA
AGATCTAGAATGATTTCAGCAGCACGACGACGTGCGCTGGGTGAAGAATT
TTCTATCTCGTCAAGCACGTTCCTTACTTGGGAACACACAAAGAGGGAGA
GAGGGAGGGAGAGAGAGAATGCAAAGGCCAATTGTGGGGTGAGATTTGGT
GGAGGAATACACCCTATATATAGGAGAAAACTAGGCACTCCCACCCTTCC
AAGCCCCTGGGTGGGACTAAACTTGGGAGGAGGTGGGAGGACGTCTGCCG
CTGGCGGGGTGGGCCCTACCCCACGCGACCTAGCTCAGTTGGTGGTCGGC
GGCGGTGGGAGCCCCCACCCGCGTGCCCTAGCCCACCAAGGGCTCCTGCC
TCCCCCTCTTGGGCCTCCTCCCTCCTATGGAGGGCCCATGTGGGGGGTTC
CTTTTTATTTTACTATTTAAACAATTTATATTTAATATTAATTTATAATT
AAAATTGAATAGACTTTATTTAATTCCTTCTTATTCAAAACTCCTTTTTG
AGTAGTTTCTGAACACTATGATATCTCTCCGAAACACTTCCGATTCTCTC
TTCTACTTTCTCTTTTGGCTGCAGATCAACCCATAACTTCTATTACCCTT
AAGCGTGACATCCTTACGGTTCTGAATGTTCAGTCATGAAAGAGACATCT
CTCCGGCCAATGATCATCAGCGGTATATGGAAACACATGATGACCCCTTC
ACATTCCACGAATTTGGTTGTTCGCTTGAACCTTGTAAACATCGAGTCTT
ATTCCCTTTGCACAATGATACCTGGTTTGTCCAAGACCCGATCTCATATA
TCAATATATAGTTCGATCGTGTTACCGACAAACACGTTTACTCATTCCTG
TGATATCACATCCTTGTGACTGACCTAGCCACATGATTGCAAGCTCATTG
ATGTGATCTAAATCGAGTGGACCCAGAGTATCTATTCGTCACTCGGATAG
GAAAATTCCGATCTCGATACATAAGCATCAAATATTCCTCGGAAATAACT
GAAACACACCTTCATGGCCACCCAGTTACGGTCAAGACGGTTGATGTGAT
CAAATCAATCGCGGGAGATAGTGATTAAACATGATCTCACGGTCGCAGGA
TTAAGTTACTACGATTTGCTAGATATTGCAACATAGAACATTGTGGCCGG
ATCACATTGCAATTCTATGGTCGGATGTGTCCATCACTTCATTAAGTGAC
CTCGTTGTTAGTTGACGTCTATGTCAGTCCATGATCGGGAAATCTCGATC
ATCAGCTGCCCAACGAACTAGCTAGTACTAGAGGATACCAGGACCTGGTT
GTTTATATACCACACTTGTATTAATATTTCCTCTTAATACAGTTATGTCA
TGATATACAACTAATATAAACATTTAGAGATATAACAATAAAACAACTTT
ATTTATTGGCCTCTAGGGCATATTTCCTTCAAGATGACCACCTCGTTGAG
TTGCCCATGTAGAAACGTATTCTTGAAATCAAGTTGATGTATCTTCTAGT
TGGAGGAGAGAGCATCGAAGAGGATAACCCATATGGTAGTTAGTTTAACA
ATCGGGATAAAGGTCTCGTTGAAGTCGTGCTCCTGGGAGAAACCATGTAG
CACCTACCATGCTTTGTGGTGGTCGAGGCTGCCATCAGGCTTGGACTTGT
GATGAAATATCCACATGTTAGAGACAATTTTGGCGTTGGCGATGAGAGCA
TTGTACTCGTCAGTCATAGCCGCTAGCCAGTTTGGGTCTTTGTGAGAGAA
CCAAAAAACTGAATTAGGAACTTGTGATAGGGTGATGAAGGGGGCAACGT
GGAGGTTGAGACGCCCACGCTGACCGATGGTCTTGCCGGCCTGACGGCGG
GTGAACATCCCATGAGCGGGAGTCGAAGGAGACGGCGAAGGCGAACTCAT
CGAAGCCGTGGACGAGCTCGATGTGACGCTAGAGGCCGGGCCGTGGCCTA
CCTAGGCTGGGCGGAAGCAGCCGGCACGGCCGAAGACTGGTAGGCAAGCG
AGTGGGCTGGGCAGGCAGGCGAGTGGGCTGGCGTGCGCGTCGTTAGGGGA
GCCAGCATAGGAAAGGCTAGTGTGGGCGCAGGGCGAGGTCCAGCGGACCA
ACGCAACCCAGTAGAACAACTAGGTCCAGTGTGCATGGGTGGCACGGAGA
CCGAATCGAGTATGATGAGTGGATCGACATCTTGGGGTGAGGTTGACTCG
TTCTAGTGGAAGTTAGACACGAGAAAATCTCGGGTGCAAAGGGAAACCGA
GTTTCATCAAAAAACAACATGGTGAGATATAATAATACGACGGGACTCAA
GATCCATGCAACGGTAACCACAATGGTTAGAGGGATAAGAAAGGAACATG
CACGCGGTCGTGCGGTGCAACAGTTTGTGAGGCATGGTGGAGGAGAGGTT
GGGTAGCATAAACAACAACTAAAAGTGCGAAGGAGGATGTAATCGGGTGG
TTTGGAAATAGAGTGGAGAATGGACATGGGGCGACGAGTGCTTTGGTGGG
TAGTCTATTTAGAAGATTAATTAGTGGACGCATGGAGAGCTTCGACCCAG
AATTTAGGAGGCATGCTTTCTTGAAAATAACATGGTGCGAACTATGTCGT
TGACCGTGTGAATAATGCGTTCGGCATTAACGTTTTATGGAAAAGAGTAT
GGACACGAGAAGCGCATGAGAACACCATATTTGACGGAGAGGTCCTGAAG
TGCGCGGTTGTCAAATTTCACATCCGTCATCCGTCATCACACTGTATTGC
TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGACGTGTCGCGACATAAGCATGAAAGTTATA
AAAAGGGGAAAAACTTCAAATTTTTTGCATAGAGATATGTCCATAAGTAG
TGAGTAAAATTATAGAATGACAAGAAAATATTTATAATGAGAGACAATCT
CAACATAGTGAGTAAAACCAAGCGCTAAGTATGACAAGGTATAACCAAAT
ATATCGGCATATTCAGTTTGCCTAACAATTACACCTCTCCATGCATCTTG
CACCTAATTTTCTCTACTAGACAAAATAACCTTTTGATCCCGTATCAAAA
TGACACACAATGTCCCTTAAATATTAATTTTATCAATAACGAAAAATAAA
CTCCTGATTATCAAAAACACTCACAATGTCCTGCGTTGTATTTAAGTTGC
ACTCAATGAAAACTCCTTTAATTTCCACTGAATTTATTAAGGAAGTCCCA
CTATTTTTTGTGTGATCATTGGTGTGTTTCATTTTCTCGGAACTACGGAC
ATGGCTTCAACCTGATCGACGAACTATGTTTGTATTTATGTTTATAGTTT
AGCATTTCCTAACTCTAAATACCTGCAATGAAATCAGGTACCTAATTGTG
GTCGATGATGTATGGACAATATCAGCATGGGATGCCATCCAGTACAAGTT
GCCAAGTAGCAGACATGGCAGCAGAATCATTGTGACCACTCGGATTGATA
GTGTGGCCAAAGAATGCAGTGATCCCACTGTTGGCGTCTACCCTATAAAA
CAACTCAATTTGGAAGATTCCAAGAAGCTATTCATGAGTAAAGCATTTGG
GTCAATGGACGCTTCGTGCCCCACAGATTTGGAAACCACAATGAACAAGA
TTTTAAAAAAGTGTGGTGGCCTGCCGCTTGCAATTATTAGCATTGGCAGC
CTCTTGGCGAGCTATAGATCACCAGAGAGCAAAGACATGTGGGACACAAT
ATGCAAATCAATTGGTTCTCAGATGGAGAGCAGCCCTACCTTGGAGGGGA
TGAGGCAGATAATCACACTCAGCTACAACCACCTGCCTTATAATCTCAAG
GGCTGCATGATGTATCTTTCAATTTTTCCTGAAGACTATGAGATCAGGAC
CATTAGGCTCTTGTACAGATGGATTGCTGAGGGATTAGTGGAGGAAAAAC
GGGGGCTGACTGTGATGGAGGTTGCAGAGTCTTACTTCGATGAGCTGCTA
AGTAGGAGCATGATTGTTCCAACTTCCGGTATGAGCTACAATGGGAGGGC
GAATGCATGTCGGGTGCACGACATGATGCTTGAGGTCATGGTCTCCAAGT
CCTTGGAGGCTAACTTTGTTAGCCTGGTAGGATCACAGTACGAAACAGTG
TCATATGAGAGGATTCGTCGCCTCTCCATCCATGATGCCACCACCATGGA
CTCTTCTTCACCCAAGAAACAAAAGAAGAAAAAAGCAGCGGGTCACGGCA
AGAGTAATGGCATCGAGATGATGAACACTAAGCATGTTCGGTCACTAACC
ATGTTTGAGATCGAAGGGCATAACCTCCTCAGTAGGATGCGAGAGTTCAC
CCTGCTGAGGGTACTTGATCTGGAAGGCTGCAAGGGCCTAGAAAATAAGC
ATGTGGAGCACATCTGCAGGATGTATCTCTTAAGGTTCTTGAGCTTGAGG
AATACAGAGGTCAGCGTGTTACCTAAGAAAATCGGTGAGCTAGAGCATTT
GCAGATGCTTAATGTTGATTGCACGTCCATTGAGAAGCTACCAGAAGAAG
TAACAAAGTTGGAGAGGCTTGAGAATGTAGACTTCCGCAATAAGCATAAG
TGGTCCATTATGTGGACTCCTCCGCGGGGGCTCTATAGAATGAAGGCACT
GCGTGAGGTGAATTACATGATTGTAAATGATGTCCATGTTGCCAGGGAGG
TTGGGAAACTAGGGCAGCTGCGGCACATAGGTATCTGGGTCTTTCGGGAA
AATGAAGAGGTTCTTCGAGAGCTCGCATGCTCCCTAAGCAAGACATGCTC
CCTCCGGGCTCTTGCCATTGGTTGCTTTCGGCAGGGCCCTGTGAACTTCC
TCCTTCAAATGGAATCTCCGCCACGGCTCCTAAGGTACTTAAGCATTGAC
GGTGATATCGATGAATTGCCCAACTGGTCCAGGTCACTAGCATATCTTGC
TGAGATTGACATTATGAATACATGCCTTGATAATGATCAAGCATTCGGCG
TCCTTTGTAACTTGCCTAACCTGCAGAGAATCTGGTTGGGGCCAAGAGCC
TATGTTGGCCATGAGCTGGTTGCACGCACTTCCCACAACTTCCCCATGCT
GAGGAATCTTGGGTGGTGTTGTAGAGGTGTGCATCCGGGGCTTCGGTTTG
AAAAAGGATCCATGGATAAGCTCGAGAAGCTTATCGTGGAATTCGGTGCC
GATCGGACCAGTATTGTCGGAGTCGAGCATTTGCCTAACCTTAAAGAGGT
GGAGCTCATGGGTGACAAACACGACTCCTCACTGAGCGATACATTGGACC
AGCTGATGGCGGAGAGTAAGACACGCCCAGAGCACAAACAATTCAAGGTT
GTAGCCAAGTACCAGTGATCGGTGATGACTTTGCTTGCTGGGTGTTTAGC
CATCTTGGGTTTTGTTCGTTTGACTATGTCCATCAAATGAGTTGGTCGAT
CTGGCGCCATGAACCAATTCATCTTAAGTAGCGAGGGTCATGTCACCAAG
AAAAAGGGGAAATTGCTTAGCTTAAAAGGCTTACTCTTTAGATTCGCTAC
CTGAACAACCCC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.