Query (optional)   in Class  

GrainGenes Sequence Report: AA020181

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Sequence
AA020181
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA020181
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCTGCACCCAAGATATTGCTGCTTCTCAGAAAAAAGAGATTGCTTGCTG
ATTCTTCTCCTGTGGTAGCTAACTACTGGCGGATCCGCATGGCTGTGGTC
ACCAGAGCCCGCGCTTCTCTCCCTTCGCCGTCATCATCGCCATTGCCGGC
CTTCTCCCCTCGGTCGCCTCGGCCCGAGGTGGAGAGGATGTTCACGCGCG
GAGCGAGCGGGCGGTCCTCTGGCACTAACAGGAACGCTAGCCTCAGAGAG
ATTGACGAGGAGGCCACAATCTTGGAGGATGAGGATGACGACGGTGGAGG
GAAGCTATATGTGGCCGTAGGGAAGGACATCAAGGAAGGCAGGTCCAACC
TCCTCTGGGCAGCTCGGAACCTCCTGGCCAGCGATCTCAAGCTTTTCCTG
CTGCACGTCCACCAGCCTGCAGAGAGAATCATGACAGGTAAAATCAACCA
GCCTTGCTTCAGTTTGACTTCTTACCTCATCTGCATTAACTCATGGAGAA
GAAATGTTCTTTTGTTATTTCTGTTCATATTTCAATTGTTTCACAAGTAA
ATTCCGTATTTGTGGGAAAAGAAACAAACCTTTGTTCCTGCTGGATTTGA
ACCCCGTCTCCACGTTCTTTTCCGTCCCCTGTTCCACAAGAGAATCTGCA
ACTTTTGTGGACTATGTCTTTGTAGCTCTTCTCTAGTTAGCCTAGGAGCT
ACCCTCTAGCTCCTTTGTAAGCAACTTTATTTACTATCAAATTAATAAAA
ATCGGCAGTGGGGAGACCTACTGTTTACCCTAAAAAAAACAAGAGAATCT
GCAAAGATGATACTAATGAACTTAGCAGCAAGCAAAAGTAGCCTTCAGTT
TCTTTCGTTTTCTGCAGTAATTGTTGTTGCTGTCAAACAGTTCAGAAAGC
ACTCCTTTGTTTATTTATTTCGGATGAAAGTAACTTTTTATTACACGGCT
TTAAGAAATCCAAAACAGAAAACAGAGTTTACAGGGTATGCATTGTTTTG
CAAGTAAAGTGCTAAAACGGAAAAACTAACAAAGGGTCACCAGAATAAAG
GATAACAGCAGTAAAACTAGGGAAAGTACAGGCGCAACAATCAGCCAGCT
CGTTTATTTTGTAGACACTCCTTTATTTTCAGTAGGAACTGCAAATACTT
GTTTAATAATATATGCTGATTCAACTGTATCCCTGCCCTATGCGCAGGAT
TATGCAAGGTTTCTGCAAGCCAGCTCGAAGAAAAGGAGCTCAAAGCGTAT
AGAAAGATTGAGAAGGAGGATATGAACACACTTTTAAACCAGTACCTCAA
TTTCTGCAGAGTTTCTCTGAAGGTCTGTTAACTAACTCAGCAAGGCTATA
TTGAATTTCGAAATCATATTCACTTATGATTTTCAAATCATATGTCATTT
CAACAAAAAAAAAATACAGATGGAAGCTGAAACACTGGTGATCGAGAAGA
ACAGTCCTGCAACTGGCATTATTGAGCTCATTGATCAGAATCACATTCCA
AAGCTTGTTATGGGAACATCTTCCATCTCAGTGTATGTCCAGAGGCAATA
TTCCAGCTTTATAACAAGATTTTGTTAACAAATATAAATCGAAATTATTA
CTAGCTACACTGTTTCTGTAGAGGAAAGCACCACATGAGTTACTAATTAG
ATGCTCCACTCCTGTAAATGAAAATTTCTAATTTTTTGTGAATGTATGCT
ATTCTAGCAAGTAGTGATGAGAAACACTGCTGAACTAATTAGTCAATACT
TTGCTTAAAAAACTGCCCTTTGTTAATTGTCACACAATACAAAAGTTGTT
TTTTTATTATGTATTATTTAACTAGCAAATGACAATCATAAGATGACACT
ACACTCCTAATAAAAAACTATGGTTTACTGATTATCATCTCTCCCTCTGT
CTAGTCTAAAGTAGAAGTCAAAAACTCCAATTAATATCTAAGTTATTTAC
CTTGATTGTGAATCATTCAAAAACAGGAAGAGGAAAGTACCGAAATCAAA
AGTTGCAGCCAATGTGCATCTACAGGCTAAACCATATTGCCAGATCTTCT
ATATCTGCAAAGAGACTCTTGCTTGCTCTAGGTAAGAATATCATGCATCC
CTTAATTCAACTTAACATAAAAATTATTTCTAGCCTGGCAAAGCAACGGT
GCCATGGTTCATCATTCTTTCAGGCAGGCCACTCATCTTTCGGCAGAAAC
AGAGTCACCCCGAAGCAGCGCCGCAAGCTCCGTCTCAGATCAATCCGAGT
TCCCTCCAAGATCCCTATCACTGCCACCAGGGCATCCAGGTTTAATCTCT
ACAGATCACCAACCCCTTCAACGTCGGTCCAACTCAGTTAGTTATCCCTT
GTCTGGAACCATAGCAGACAGTGTGGAAAACATGCCAGCTGCAAGGCGGC
AGTCGATTGATATGACACCAAATGGTTTCTCTCCGAATTCCAGCCAGCAA
AGCACTGAAGGATCCTCATCAGGTCTGAAGGATTTGGACAGTATGGATGG
TTCCCCGGTGCCTGTTTCAGTTGCAAGCCCTGAAGAACATCAACACTCTA
TTGTAAGCCATATTGGACTGAGAAGAGTTCTCTAAGCATAGCCACACCTT
TCGCTTCAATTATACTAGTAATAATTTTGTTGATGTGTGGGTGTAGGGCC
AGGAGAACTATTCTTTCATTATCTAAATAAACAAAATCTATTAATAAGTA
ATCAAGTAATATGTTGTTAAAAAATTAATATGCATTATAGACAAGTAATA
TAGATGTGAACATCTGAGATGTCACATTTGCAACTATGATTCAAGAGGCT
TTGGTCCTAGGTCCTACCACAAGTTGACAATTGAATGTGTTCATGGCTGT
AATCACCCTCAATCAGTAGCGCTCGAATGTTTCACTTTGTCAAAACTTAA
AATCTTACTGCTGTTTCACTAGGTTGACCAAGCAAGGTATTTGTTTTGGT
TGTACTTGCAATACTTATTGGATACATGATGTAATACCTATTGAATTAAA
AGCAAACATAATATTTTACAGGCAGAAACTATCATACAGCATGAGGTGTT
TGAGCAACTGCACCGAGTCCGCAAAGAGTTAGAGTGCTCGAAGAAGGAAG
CATCCGAAGGCCGGCAGAAAGCCGAGAGGGATCTGTTTGAAGCTTCTATG
ATGGTATGTTATTTGTTATTGCCACATACCTTAAGTTAACCATTATTGTT
TGTTAATCTACTGTATTTTCCCAACCATTCTTCTCTAAATACATGAAATT
TATGTTACTCCCTCAGTTTCAAAATATAAGATGTTTTAGATTTGTGAAGA
AAATGAATCTAGACTTTTTTTAGTGTATAGATTCATCCCAAAGTTGAGTG
AACCTACATACTAAAACAAGTCTAGATTCATCTTCTTCACAAACCTAAAA
CGTCTTATATTTTGAAACGGAGGGAGTACATGGTACATGTGTCTCAAGTA
AGTAAACTGTTTTCTTGCAGTTCAAAGCACGGGAGAATTCACTCCGCAAA
GAAAAAAAGGAAGTAGAGGAAAGACTGACCAGAGAAAAGACTGGACTCGA
AAAAGAGCACATCCATATATGCAATGAGCTGCAGAGGGCAAATGAGCAAA
GAGCAGAACTGGAGAGCAAGCTTCTACAGACAGATTCTCTAATGAGAGAC
CTACAACAGTTGCAAGAAGAGCTGCAGCGTGAGAAAGATCATGCTGTTAG
ACAAGCTGAAGAGATGCGCCAAATAAGCGGTAATGCTGTGTTTGGCTCTA
CAGCTGCAGTTGCCTTGACAGAGTTCAGCTATGAAGAGATAAAAGAAGCA
ACCGACGACTTTGATGACTCCAAAAAGATTGGACAAGGTGGATGTGGAAG
TGTTTACAAGGCTTTTCTCCGTCATACTACTGTGGCTGTAAAGAAATTCA
ACCGTGAAGGCACAACAGGAGAGAAAGAGTTCAATGACGAGGTAATTTTC
ATCATTCCTTAAAACATAAGGTCATTGCATCAGATTAAGATGTGTCGTCA
GATGAGGAAAGAATAAAAAGGGGCATCTAAATATATGATTTAGCAATATA
TTGCAGGTAGAAACACTGTGTAGGATGAGGCATCCAAACCTTGTCACTCT
GATAGGAGTGTGCCGAGAGGCCAAAGTATTGGTTTTCGAATTCTTGTCAA
ATGGAAGCCTGGAGGACTGTCTACAGTGCAAGCACCAAATGGAGCCACTC
TCTTGGCGGATGCGTATCAGAATTGCTGTCGACATCTGCACCGGACTTAT
CTTCCTCCACTCCAACAAACCAAAAGGCATTGCCCATGGTGATCTGAAGC
CTGACAATGTCCTTCTTGACACTAGCTTTGTTTGCAAACTGGCAGATTTT
GGGATCTCCCGTCCCTTGAATCTGACAAACACCACTGTCACCCCTTACCA
CCGAACAAACCAAATTAAAGGCACCATGGGATACATGGATCCAGGATACA
TAGCCTCGGGGGAGCTCACAGCGCAGTATGACGTCTACTCCTTTGGAGTA
GTCCTTATGCGATTACTAACTGGCAAGAGCCCCCTAGGCCTTCCGAATGA
GGTGGAGGCAGCCTTGAGCAACGACATGTTGCAAGATATAATTGATACTT
CTGCAGGGGAATGGCCACCTGAGTACACTGAAGAGTTGGCAAGACTGGCA
CTGAAATGTTGCCGGTATGAGAGAAAGGAGCGGCCTGATCTTGCAAAGGA
GGCCTGGAGTGTCCTGCAAGCTATGATGAACTGTCCAGACGATAAACGCC
AACCACCAACGTTTTTCATCTGCCCAATGACACAGGTCAGTTAACAAATC
CAAGAAATGAAGCACTTGAATCATGTGATGCAGTAGTCACACCAACATTA
CCTTCTATTTACCTGATTAATAAGCTTCAACTCTACAGTCCATCCATTAC
TGTAGTTACCATCTTTGATATAACCTTGCATTTTATAAATATTTTCAGGA
GATCATGAGGGATCCGCACATCGCTGCTGACGGATTCACATATGAAGGCG
AGGCCATCAAGGATTGGCTTCAGAGGGGCCATAAAATGTCCCCCATGACC
TACCTCAGTTTCACACACCATGAGTTAATACCGAACAATGCCCTTCGTTT
TGCGATTCAGGAATGGCAAATGCAACAGCAACCATGATTTCAACCTTCCT
TTTAATTTATACTATGGCATGCTTGTGAAGTGAGCCAAATGGGTTTAAAT
TTGTAGTCTAGAGAACATTTTTTCTCACTTTAGCAGTTAGCGCTCTCTCA
ATGTTTGAGCCCACAAATGAGAGGTGATGTACATGCTTTCAGTCACATGT
GTTTGGGATGAACTGACATGGCTATAGCTCTCCAAGAGGACTGTGATATT
CATGTTGGATGTAAAGTGATGTGTATTACCCAATTTCCCTCTTGATTTTG
CAAGACTATAAGTTACAGCAAATCAGCACGGTTTCCAAAAAAACAGTAAA
TCAGCGATCAGATAAATCAGAAGTTAGATAGTTTATCACTGACCTTCGAG
AATAATATGATTACTTCATAAATTCTATCTTTACCAATAGAGGAACTGGT
CTGACTTGATAATTCTACTGCATGATGCAATTTATGGGAGATGATAGGCA
CATTATCTGCACTGCTTTGTAGGCAGAGGCTGTAGGCAAAGTGGCTTAGT
TGCTCTTACCTGCCGACAATTTAGCACCTGTCCGCTAGCTTGAAATTCTT
CAGAGTAGCATAATCTTGCAGGTTAACAGCAAAAGGCATTCAATGAGTTC
TCAGTGAAGAGCGGAACTGTTGGCGGCACAATGTGGCAAGTAGGAATTAG
AGCAATCATGGGTATCATCGTGACGAGCGCCATCAAAGAATCACTAGAAT
CGATGGAGGCCGTGGGCTGGGCATTCGGACAAACAGGTTGTGTGTGAAAA
GAGCTGTTGAGGAAACACAGGAACGCACATGAAGCAAGCGTGCAATGCAG
TTATCCATCGACAAAACTAGATGAGATGATTAGGGGAGAACACTTACGGT
TACAGCAGGGACGGTTGGGATCAACGACAAAAACTGAAGAAGCCAGTGAT
GAGGAAGTATATATACCCAGGAGGGGGCTGAAGTGAAGTGAGTGCCTCAC
TTGACTCTGAAAGTCGTCCACCATGATAAAGGCACAGCTAGCTCCTGCCA
TGGCAATTACAGTGAGATTACTGGGAAAGTCCTGCATCTACATCGGTAAT
CACCATGATATCACCATCACACCATATATTAGCTTAATCAATTCCAGCCG
TCTGTTTTGGCAACAAGTCAGGCCGAGAAAGCAGGGTTGTTTGTGTGTGT
ACAGCTACTGCAACCAGTCAACCTCTGCATAAATAAATCTGTAACGATCC
AGAGAAAGATCAAGAGGAAAAAATATGGAATGAACAAGTGGGCAGGTATA
AAATGGCAGAGCAGACAAGCCACGGGGGACGACTCCAAAGCTGAGCTACT
GGCTAAGCACTAGGAAATCAAAAAAGAAAAAATTGATAGAGGAGATAGCT
GCGATGATGGATGGCATGGCCGGCGGCTCACCTGCCGGCGAATCGCCGGA
GCCGTGCTCCTCCTTCTCCGGCGGCGGGGAGAAGAGGCAGAAGAAGGTGT
ACGTGGCGGTGGGGGTGGGGGCGGGGGCGGGGGAGTCCAAGGCCATGGTG
CTGTGGGCGCTGCACAAGTTCCCCAGCAAAGACGCCCTGGTGCTGCTCCA
TGTCTACTCCAGCCCCAGATTCATCCCCATCAGTGCGTCTCCCCCCTGTA
CCATGTGCTCTTCTCTTCCGTGGGAAAATTTATTTCTTTTCTCCCCATTT
TTTTTCTCATCGGTTTATTGCTCTTACTGGATGGTAAGTGCCAAAAAAAT
TCAATTTGCGAATAAATAAATAAATACTCCCTCTGTCCCTGATTAGATGT
CCCAGAATCAAGTCTGCAAATTATATTTGTTGTCATCCTATTCGCATTAT
AAATAATTAGCTTCTGATTCTGATGGTGATTTTGTACCACACTAATTACA
TACTATCATGGCAAATAGAGACATGGGAGGAAATATGCAACTTGTAATTC
ATAGAGGCCATATACACGTAGATGTGTACTAAGTATGTAGAAAACTCCTT
ATAAGCTGACAAGTACACAACGATATAACCATGGAAGCAGATGCTCAGTC
TCCAATGTTGTTTTGCAGTGGGCACCAGGATTCCTGTTAGCCAGGTGCAA
GAGCAGCAGCTGGTTGAATACAAGAAGATGGAGCTGCAAAACATCAGCGA
CATCCTGGATCAGCACCTGCTCTTGTGTGCACGTGAAAAGGTTTGTTTGC
TTCATAGTTAACACAAATAGTCACCTCTCAGAACGCAAAGCAAAATTCAT
ACCAAATTGACCGATATATATACTTTTTTCCAGGTACAAGCTGAGAAGCT
GGTGGTTGAATCAGAGGATGTCGCACAGGGGCTAGTCAAGCTCATCTCCG
AGCACCATGTCACCGCGCTCGTCATGGGGGCAGCAGCCGATAAACATTAC
ACAAAGTACGCTGCGGATCTTCCGAAGCGTCTTTATCGATGTTTATGGAT
GATTGCTATAACTGAACACTTGAAAGTTCATTAGTATTGCAGCAAACAGA
AAGGGCTAACTCATTGTTTCAAGAGTTTCAGGAAAATGAAGGCTCTTGGG
TCCAAGAAAGCACAAGCTGTAGAACAGCGAGCGGATCCTCGCTGCAAAAT
ATGGTACATTTGCAAAGGAACGCTGGTTTACCGTAGGTACGGCTGGTCGA
CTGCGAATAGTCTTCACTTGTGTTCTTAGGGTTTCATAGCCAGCCCATTT
GACATGTTTCCCTCCATGGATTTGCCTTTTCTTTTCTACCAGGAACGCTG
TTCCCATTAACAATGAAGCAATGCAGGAAGATAGGCGAAAGTCTGGTGAT
CAGCAGATTTCAGTGGATAGATCAACAAGTTTGTCAGAGACGTGGTGTGT
TTCAAACACGTGGCTATGCAAACCGAGCATCGGAGCACAGACCGAAAGGG
CTAGTCCGTGCAGGTCGTACGATAATGATACGGTAAGCACAACCCATGAT
GGAGAACTTGCTTGATAAACTCACAAAATAGGTGATCGTTACATCATGCT
AGTTCAACTTTAAGACAAAGGCAGAATACAGAAGAAAATGTTGATGTACC
TTGTCTCATGCAGGAAACTATTAAGGACGAATTTGACGAGCATGACAATA
AATTCCAGCATATGCTCCGGGAGTTAGATAGTGTAAAAAAGCAAGCTTAT
GACGAAAAATGCAGTCGTGAGAAGGCAGAAAGGGAGTTACTTGATGCTTT
CCAGAAAGTAAGAGTAGCTTAACTTGCATTTGTCCGTCATATCAAGTATA
CTAATGTTAACAGTGAGACTACTTGCGAAGCACCTTCAGAAACTTTACCA
TCAATTATAAATTTGTGAAGAAATTAACAAATGTGGAGCCTTTGTTTTGG
GTAATTAGCATCTACGTATTTGAATGAAATACTTTCTCACATTTAGTCTG
TCCAACAGGCACGACATTTCGAGAATCTGTACTTTGGAGAAGTGAAGCAA
AGGAATGAAATAGAGGAAAAGTTGACGGCAACAATGGAGGAAGTTGAGAG
ACTCACACAAAAAAATGATGAATTTTGTGCAAAGCTTCAACAGGAGCGTG
AGAAAAGGCTGGCTCTGGAGAAGAGAACTGCCCACTCGGACCGTATCATC
AAAGATTTGATGCTGCAGTGTGACAAAGCTCTAAGAAAGGTAGAAGCACT
ACATGCAAAGAAAGGAGAGTCTAGTGGAGCCACAGAGGGGATCATGCACA
TCACGGAGTTATCCGGCTCAGAGATAAAGGAGGCAACCAATAACTTTGAC
CACTCATTGAAGGTTGGAGAAAGTGTTTACGGAAGTGTCTACAAGGGATT
TCTTCGGCACACAAATGTAGCAATAAAGAAGTTGAATCCTGAAAGAACAC
AGTCACAGTCGCAGTTCAATCAAGAGGTTGAATGACTTGTTCTAGTTAAT
TATTTGATTTCTTTCAACACATATTTTCCAGTTCAAATAAATTACTGTGC
TGCAGATAGTTAACTTGTTCATGATGCCTACTTTGCAGGTAGAGATTCTC
AGTAGGGTGAGGCATCCAAACCTCGTTACTCTTATAGGAGCTTGCAAGGA
GGATCAAGCTCTTGTCTATGAATACATGCCCAATGGAAGCTTGGATGACC
GCCTGGCTTGCAAGGACAATTCTAAACCTCTTGGTTGGCAGCTGCGCACC
CGCATCATTTCTGATGTTTGCTCCGCGCTGATCTTCCTCCATTCTAATAA
ACCTCATAGCATTGTTCACAGCGACCTGAAAGCATCTAACATCATTCTTG
ATGGGAATAATGTAGCAAAGCTCAGTGGTTTTGGTGTTTGCCGAATGTTC
ACTGATGAGTTCAGGAACACAACCACTCTATATAGGCATACCCACCCAAA
GGGATCCTTTGTGTACATTGATCCTGAATATGTCATGACTGGTGATCTGA
CACCCCAATCTGATGTATACTCTTTCGGAATCGTGCTCCTACGCCTCTTG
ACTGGAAGACCAGGATTCGGGCTCTTGAAAGATGTACAACGAGCAGTGGA
AAAGGATTGCTTGAAAGCAATATTGGATTCATCTGCTGGGGATTGGCCGG
CTATGCAGGCTGAGCAATTGGCTCGGGTTGGTCTGAGATGTTGTGAAATC
AGACGAAAAAATCGCCCTGACCTGCAAAAGGAGGTTTGGACTATACTTGA
ACCAATGTTGAAATCTGCTTCCGTTAAGCTATGTTCCCTGTCATTTAAAT
CAGTATCAGAAGACCTTGGTGGTGTGCCATCCTACTTCATCTGTCCAATA
CTACAGGTAAGTCATAAATTCCACTTGGTGGGTACCATTTTTCTCTGCCA
TCAGTTTTGATAATTGATATGTATGGAGGGATACCGGTAAAATATCTCAA
GCGTATTTACTTAACCTTAGATTTCTCCTAAAATTTTGTCTCCAATCATT
ATTCTAATCATTTTATCCAAAGCCGGTTGATTTTCGTGCATAAACAACAT
TTGTAATTCAGATCGCTTCACCCTTGCATTTATGTGGTGCAGGATATCAT
GAGGGAGCCTCTAATTGCTGCAGATGGTTTTACCTATGAAGCCGAAGCTA
TAAGAGAGTGGATTGACAGTGGACACCATACATCACCCATGACAAACCTT
GAGCTACACCACCGTGATCTTTTGCCGAACCATGCCCTCCGTTCTGCAAT
CCAAGAATGGCTGCAGACAAACACAAATTAATATGTTAGCTTTATCACCA
TGGAACTTGGAAATGGAAAACTACTGGTGTTTGACTGCCGACAGAGAACA
CAAGAAACAGAAGGCTTCCGCGTGTATTCTGAAAGAACAACCAGTGCTTT
CTATTTTACTTCTTGAGCAAAACTTGTATGTAAATGCAATAACTTGGAGC
TCCATCGATGGCATGCTGGAGTTTGTACATGGATTTATCAAGAGAAAACT
GTTTTGGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.