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GrainGenes Sequence Report: AA030224

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Sequence
AA030224
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA030224
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCAAAGCGACGGAACCCCACTCTTCTCCCCGGTTCATCTTATCTCCTCC
CCACCCGCAGTCACCGCTCCATTGCAGTGCCGCAATGCTGCTCCACCTCT
TCCCACCCTCCTCCGTGGCCCCGGCCCGCCCCTCTCCGAGGCGGCCGTGC
GGAGGCGCCGCAGCGTTCACAGTGCGGTGCGCGTCCCCCTCGGCCGCGTC
GCCGTCGTCGTCGGCCGGGAAGCAGGTGGCGAATGTGCACAGCTACGGGA
CGGTGGACTTCGAGCGGCGGCGGGCGCTGCGGTGGAGCAGCCTGTACCGG
CGCGTGGCTGTGGGAAACGGAGGCCGTCCGGTGGGTCGGACGCTCGCGGA
CTGGGACGAGGGCGAGCGCCGCCTTGACAAGTGGGAGCTGTGCCGCATCG
CCAGGGAGCTCCGCAAGTTCCGCCGGTTCCACCTTGCCCTCCAGGTGACG
GTTCCTGGCCTCGTCGCCGGAGATCTATTTACTTTTGAATCTATTTCTGC
ATGATGAGTCACCTCGCCCAGCGATGTTGGGTACTACTATTGCGTAAGTT
TTGTTCGAATTAAGAGGCTAATGTTGGTAGCATTATGCGCATGCCATTGA
TAGAAATTACTAAATATTGGCTGTTCTATGGTTCCTTGCGATTACATTGA
CTTCATCGTTGCAAGCTTTAGGAAATTTATCTATTTTGTGCCAGATAATG
TTGAAATCCTAGTGGTGGTTGGAGCACTTTAGGCTGAAATTCAGGGTAAA
TTTTTGTGAGATGGAAATTTAGCGTGGTCTAAGTATGCTAGTTAATAATG
TGTGAAAACTGTATTTAGGAGGCCAGGCTAAGGGCTAAGGTTGATTAAAG
TTGGAAATACTCAAGTTACTCTAAGCAGATTTACCGCCGCATTATCCGCA
ATTCATTGCTCAAAGGATGATCTAGCAAATTTATAACCACATAAAGATAG
AATTAGTAATTGTACTTACTGCACCCGTGTATTGTGTGTTTGTTTAGCTT
TGCAATAGACTAGTCTAGATCTATTCGGTAGCACCTTAATCTTGCGTATC
TAGACACTAAACTGAGAGAGGGAGAGAGGGGTCTGAGAGGAGGGAAAACC
ACCTGCGCCCTGGCTCGACAAGCACGAGCCAGAGGGGATGCCGGAGCTTG
TGTCGGAGCTGGAGCCGCCATCGTTAGCCATGGGAATAGGGGGGCGAGAG
TGTGGCGGCGGTGGCGCTTCCCGTCGGCGCAGCGCTAAGCCTAGATCGGT
AGGGCTTGTAGGTGGGGCGGCTAGGGCACGGCTAACCTCGTGAGGCGTGC
TGCCGGCCCCCCACCTCCTTTATATAGCGCTGGCGACAGGGGCCCACCAA
CTAGATAGGGTTGGGCGCCCCCGATCAGGGCGCGGAAAGGGGCGTGACGG
GCCGTTGGGCCCGGTCAAGTTGAGATCAATCTAACATTCTCCTCCTTGAT
CTCGACTTTACTTTTAACTTTGTACTTTACTCATTTCATCACAGATCGAT
ACATAGAGCATGTTTCATCGTCCTAGCTCAATTGCCGATAGAATCAGTCA
GCCACTATATACCTTTCTATTTTGAAACAAATCCTGTTACTTTTGGGCCT
CTGTAGTCCAGGAATCATAGGCTTTCCATTAAACTCATGCCGGCTATGTG
TTCCTTGAACACATTGGGTGGTAAGCCTTTCGTTAGCGGATCCGCAAGCA
TATCCTTTGTCCTTATATGCTCGAGTCTTATTGTTTGATCCTGGACTTTG
TCCTTCACAATATAGTACTTTATATCTATAGACTTTGTAGCATTACTCGA
CTTGTTGTTGTGAGCATAGAATACTGCGGGCTCGTTGTCACAGTACATCT
TTAGTGGCCTGCTGATGCAGTCAACCACTTTCAAGTAGGGTAAAAATTTC
TTTAACCATAACGCCTGTCCCATGGCCTCATAACATGCTATAAGTTCTGC
ATACATCGTAGATAATGCAACTATCGACTGTTTGGCGCTTCTCCACGAAA
TAGCACCTCCTGCGAGAGTAAAGACATATCCTGTCGTGGACTTTTTGTCG
TCTTTATCTCCCGCAAAATCTGCATCTGAATACCCTCTTATCTCTAGGGA
ATCAGATCTTTTATATGTTAGCATGAGGCATTTTGTGCCTTGCACATAAC
GCAAAGCTTTCTTTACCATCTTCCAGTGTTCTATGCCTGGATTCTCTTGA
TATCTACCGAGTACCCCGGTGATAAAAGCTAAGTCAGGACGAGTGCACTC
TTGTGCATACTGTAAGCTTCCAACAGCCGAAGCATATGGTACTGACTTTA
TTTGATCGATCTCATATTGATTCTTTGGACATTAGGATTTCCCAAAACTG
TCGCCCTTGACTATGGGAGCAGGTGTTGCATTACTCGCATGCATATTGTA
TTTCTTTAAAATCTTTTCACAATACGCTTTCTGTGACAGTCCTAACACTC
CATTCTTTCTATCTCGGTGAATTTCTATGCCCAAAACATAAGAAGCTTCA
CCAAGGTCTTTCATGTCAAAATTTGATGACAAGAACTTCTTTGTCTCTAG
TAGTAGACTAACATCACTACTAGCAAGCAAGATGTCATCCACATACAGAA
TTAGGAAAATATATTTCCCATTTTTGAACTTTGCATAAATGCAGTTGTCC
TCAACATTTTCCTTGAATCCAAATATTTTAATTGTATCATTAAACTTTAA
ATACCAGTGCCTAGAGGCTTGCTTTAACCCATAAATGGATTTCTTTAGGC
GGCACTATCCCATATGTTCCTTCCCCTCCATGAAAAAACCCTTGGGTTGT
TTCATGTAAACATTTTCTTCTAAATCTCCATTTAGAAATGCCTTCTTAAC
ATCCATTTGATGCAACTCTAAATAAAAATGTGCAACTAGTGCCATGATGA
TTCTGAAGGAGTCCTTACATGAGATCGGAGAAAAAGTCTCATTGTAATCT
ACGCCTTCTCTTTGCGTAAAGCCTTTTGCCACAAGTCTAGCTTTGTACTT
TTCTACATTCCCATTGGAGTCATACTTTGTTTTGTAGACCCATTTGCATC
CTACTGTTTTGGCTCCTTTAGGGATTTCCTCTAAGTCCCAAACATTGTTG
GAACTCATTGATTTCATTTCATCTTCCATTGCCTCCACCCACTTGGCTGA
GTGAGGGCTACTCATGGCTTCTTCATATGAGGTAGGATCGCCCTCCATAT
GAACTATGTTGTAGACTTTGTAAATTTCTTTGGAAATGGCTGGTCTTCGT
TCTCTTTTAGACCTTCCGAGTTCATCAGACTCTTGCTCATTTCTTGCCTC
GGGTTCAGGCACATTTACAGTATGTGGCTGTTCTGGCTCCCTTTCGTGCT
CAACAGTGGGTTCAGGTGGCTCCTGATGGACAGGTTCCGAACTTTCGCCC
ATTGTTGTCACGTGTGGAATCACAACAGGTGCCGGCACCACAACCTCAGG
GGTTGTAGATGGTGGCACAACAGGTAGCGAGAAAAATGGCTCCTGAGTCA
TCGGATTAGGTGCATGCACCCTCTTCTCCTCAAGATCAATTTCCCGAGCT
ACCGTGCTCCCCCTCATCAATTCGTCCTCCAAGAAGACTGCATGTCTCGT
TTCTACGAACTTTGTGTATCTGTCAGGACAGTAGAAACGATAGCCTTTTG
ACTTATCTGGATAGCCAATAAAGTGGCAAGATGCTGTTTTGGGGTCTAAC
TTTGCAATGGTTGGATTGAAAACTTTTGCCTCAGCTGGGCTCCCCCAGAC
CCTCAAGTGGTGCAGAGAGGGGACTCTGCCTGTCCACAATTCATACGGTG
TTTTGGGCACCGACTTACTTGGTACTCTGTTGAGAATGTGGATGGCGGTT
TTAAGCGCCTCCATCCACAATCCCAATGGTAGGGTGGAATAGCTCATCAT
GCTGCGCACCATATCCATAAGGGTACGGTTACGCCTTTCAGCTACTCCGT
TTTGCTGAGGTTCGCCCGGCATAGAATACTGGGCGACTATTCCATTTTCC
TGCAGGAACCTTGCAAAGGGTCCTGGTACTTGACCATATGGAGTATGCCG
ACCGTAGTACTCCCCCCACGGTCAGACCGGACTATCTTAATTCTTTTATC
ATGCTGATTTTCTACTTCAGCTTTGAAAATTTTAAATTTAGCCAATGCTT
CAGATCTTTCTTTAATTGGATAAATATAACCATACCAGGAGTGATCATCC
GTGAATGTTATGAATGAATCATAGTCATCCACACTTTTCACCGGAAACGG
TCCACAAATATCAGTGTGGATTATTTCTAGTGTAGCTATGCTTCGGTTTG
CATCCTTTTTAATTTGTTTTACATACTTTCCTTTAATGCAATCTATGCAT
TGTTCTATGTCTGAGAACTCTAACGGAGGAAGGCTTTCTATTCTTCCCCT
CGAAATATGGCCTAATCTGCAGTGCCATAACTTCGATGAGTCAAGAGTTC
GCTTTCTTTTATTTTGTTCTTTGTTCGACAAGGGAACTTGTTCATTCACA
TCACACACAGAAAATACTTTCTCATGCAAAGATAATAAATAAAGCTTGTC
ATGTAGTGTAGCAACACCCACACAAGTATCTTTCAACCAAATGGCACATT
TGCCATGTCCAAAATAGCACTCATACAATTCTTTGTCCAAGCACGACACA
CTTATTAAATTTCTATGAATGGAAGGAACAAAAAGAACATCCTTAAGCAA
AAGAGAAGAGCCATCAGCCAGCTCCAGAGGAATGTCGCCAACAGCCTGCA
CTTCTGCTTCAATCCCATTCGCCACTTCAATGAGTCTTTCTCTTTTTGGC
AAAATCCTTGTCGAATGGAACCCCTGTAAAGAGTTGGCAACATGAACGGT
TGCACCAGAGTCAATCCACCAAGTAGATTTAGAAAACTTTTCATACAGAG
ATTCATTAACAAAAGAGACTATATCTTTACCTTTTTGGCCATTATGGACT
TCAGCCATATTGGACAATCCTTCTTGTAGTGGCCAACCTTTTTGCAATGG
TGGCACTGGTCTTTGTCCTCAGGGGTAGACTGCTGGTACTGATGCTGGTG
CTGTTGTGGGCCCTTGCCATGTGGCTTGGAAGGTGAGCCACCATGGTTAC
TGTTGGTGAAGTTCCTCTTCCTATTGTCCTTCACGTAGTTCAAGGAACCA
CCGTGAATGGACTTCAGCCTTTCTTCCTCTTGAGAACACATCCCTATGGT
CTTTTCAATGTCCCACTTTTCAGGGGACATGTTATAGTTGATGACGAAGT
TCTCGAACTGTTGGGGAAGAGAGGCCATGACAAGATGCACCGGAAGAGCA
GGCTTGAGCTCGAGGCCCTCATCCATGGGCTTCAACTTGGCCGCCATGTT
GGACATCCTCAAGATGTGCTCTCTAATGCCATGTGGCCCTCCCGTATACT
TTTCTGTCACCAGCTGTTTTAGCAGCTGGGTTGCATACATCTTTGAAGAG
CCAGTTTTAAACTGGCTCTTTATCTTTGCAAGGTATTCGCCAACAGAGGC
ACACTCTCCAATTGAGCCCACTATTGCGTTCTCAATTGTGTTCTTGACAA
AAGCCAAACATTTCTTATTGGCGTTCACCCACTTTTGATTGTCTATTGAG
TAGGCCAGCTCCAAAGGAGCATGGTCCATCTTTCTCTTTTCAAATGCAGC
ACTTTCCTCAGCATCACCCCTCACAGGGTCTTCGGGCTTGACTGGTTGTT
TGGTGTCAACCACCCAGTCCACCTCGGCGCAGACAAACGCCAGATCAACC
TTTTTCCTCCATTCGGAGTAGTTATCCCCCCTGAGTAGTGGGATGTCCTT
CAGACAGCTCATGAGGTTGAGACCTCCTGCAAATCACAAAAGATGTGAGA
TAACCAAAAACAACTGTATGCATTAATCCAACGTTGGTATAAATTAAGCA
TGCAATTGTTTGTGCCATTTAAAATTACATCACCGTTGGGTAAAAATAAA
ATTAAATGCACCTTTAATGCATAATGAAAGGGATCATGATCATGTTTATT
AATAACGTTGGTAAATTAATAACATGGAGCATAATCAACTTTAAATTACT
TTATCTCACACTTTTATAACAACATTGACACACTTTTATTGCATTCTAGC
AATTTAAATCAACTATTTGCAGCGGAAACATTATTCATAAACTTTCATAA
GACTTTTAATTATTATTTTTTTTACAGAAAAATCTGTCTCTATTCCATTT
TCTAGTCAAATATTCACTTGAAATAAATAGACTAGAAAAACTATACAAAA
AACTGTCAAAAGATTGATGAAAAACATCAAAGTATAGATCCTGGAAAAAC
AATAAACAGAAGCTGCTACATGGGCCAGTGTGGCCCAGCAGCCTGGGGCT
ATCTGTCGCGCGGGGCGCTCGCTAGAGCGACCGGCTGCCCGCGGCCTGGG
CCCGCCAAGGCCTGCCTGTGCCCTGCCTTGCCCGCACGCCCGCTAGCTTG
TGCGCCGCCCACGCGCAGCAGAGACGCGCAAGCGGGCTTGCTCGCCAGCG
GCCCAACAGCTGCCCACTTGGCCCGCCAGCAACGGCGGCCGCCCGTCCCG
CGTCGATCCACGCCGTCCGTTTCTCTACCCTAGATCGGACGGCTGCCCGC
GCCCCTCGGAGGGATAAAAGCGCCCGCGCCGCAGCCCCCTTGAAACCCTA
GGTTCATTCCCCCCCCCCCCCCCGTGCACCCTGCGTCCCCCTGGCTCCTC
TCTGTCTGGCGGCGGCCTCCCGCGAGGTTTGAGGCGAGGCGGCGCCGCCC
GGCGCAGCCGGCGGCCCCCTCCCTCTCCTAGCTTGCTGGCCCCTCCCTCC
CCCTTCTGCTTGCTCCGCGCCGCGGCGGCGCAACCGTCCCGCGCGCGACG
AGCAGTGAGGAGGCAGCGAGGTGGCCGCTCGGGGAAGTGCGGCTGCGCGC
TCTGGCTCTCTGGCGGCGCTGGAGAGGCGAGGCGGCCGTCCGTCCGGCGA
CTGCGCCGGCGACGGTCCCCTACGCCGCCACCTCTTCTCTTTTCACCCTT
CTGTCCCCCCACCCCCTTTGATGCGAGGCAGAGAGGAGAGACAGCGACGA
GCGGCGGAGCCGCTGCCCCCCCCTTCTGCCCCCTTGACGGCGGTGCGTCC
ACCCGAGGGTGGGCGCATGCCCGTCAAGCGGCGCAGTGGTGGGGCTACTC
TCCCGGCGCACGGCGGCGGCCGGTGTTCCCTCCCCTTTCTTTTCCTTTTT
TTGTTCGACTTTTCTTTTTGGGGATTCGGGGATCTGTCTTCTCTTGCGGG
ATCTATGTGCTCGAGAACGATCTAGGGTTAGGGTTTAGACCCTTGGGATT
TTCTTTGCCCCCGAAGGGGTGTGTTCTTCTTCCGACGCCTCGGCATGCCG
ATGCGCGTCGAGATAGAGAGGAACGGCACGGCCAGAGGGGCAAGGCGCAC
TTTGGGGTTTTGATCTAGGGTTTTTCACTTTTGATTTCTTTTGCACCGAA
CAAATCTAGCCACGATTGGCTCTGATACCAATGTTTGTTTAGCTTTGCAA
TAGACTAGTCTAGATCTATTCGGTAGCACTTTAATCTTGCGTATCTAGAC
ACTAAACTGAGAGAGGGAGAGAGGGATCTAAGAGGAGGGAAAACCACCTG
CACCCTGGCTCGACAAGCACGAGCCAGAGGGGATGCCGGAGCTGGAGCCG
CCATCGTTAGCCATGGGAATAGGGGGGCGAGAGTGTGGCGGCGGTGGTGC
TTCCCGTCGGCGCAGCGCTAAGCCTAGATCGGTAGGGCTTGTAGGTGGGG
CGGCTAGGGCACGGCTAACCTCGTGAGGTGTGCTGCCGGCCCCCCACCTC
CTTTATATAGCGCTGGCGACAGGGGCCCACCAACAAGATAGGGTTGGGCG
CCCCCGATCAGGGCGCGGATAGGGGCATGACGGGCCGTTGGGCCCGGTCA
CGTTGAGATCAATCTAACATTGTGAACATGGAGCTAAATTGGAAAGCTAC
TTCGAATTGGAAATCATTTTCAAGGGTCAACTTCGATAATGATCGTTTAT
GGAAGAGTCTGAACTTACTTTCTTGCTATTATTGCTGATTGGTGCCTTTT
GATGGCTAATCCTACTAATAAATAGTATGGGCTGTAATCAATTTTTTCTG
TTGCATGTGCAGGTTTATGATTGGATGACTGAGCGCAGGGATAGATTTTC
GCTATCAGCTAGTGATATGGCAATCCAGTTGGATCTGGTTGCTAAAGTAC
GTGGTGTTCAAGATGCTGAAGAATACTTCGAAAAACTTCCTGATCCCATG
AAGGACAAGCGGACATATGGGTCTCTTCTCAATGTTTATGCCCAAGCTAA
GATGAAAGAGAAAACAGAGAAAACATTTGAGCTGATGAGGAAAAGGGGAT
ATGCGATTGACACGCTACCTTTTAATGTGCTGATGAATTTTTATGTGGAT
GTTGATGAGCCTGAAAAAGTTACTATGGTTACTGATGAGATGAAGAAAAG
AAATGTTCCTTTTGATGTCTGCACTTACAACATTTGGATAAAGAGTTGTG
CAGCTATGAAAGATGCTGATGGAATGGAGCAGATCTTTAACCAGATGATT
GCTGATGAGTCTGTTGTTGCCAATTGGACTACTTATACCACACTTGCTAG
CATGCATATTAAGATGGAAAACTTTGAGAAAGCAGAAGAATGCCTGAAAG
AAGCTGAAAAGAGAACTACAGGGAGGGACAAGAAATGCTTCCATTTTCTC
ATCACACTCTATAGCCACCTCCAAAAGAAGGAAGAAGTCTACCGCATTTG
GAATTGGTATAAAGCAACTTTCAAAACAATTCACAACCTGGGTTACCAGG
AGGTGCTGTCTGCCCTTGTTAGGCTAGGGGATATCGAGGGAGCTGAACTT
CTATACGAGGAATGGGCCTCCAAAAGTTCTAGCTTTGATCCTAAGACCAT
GAACATTTTATTAGCATGGTACTCTAGAGAAGGTTTTGTTGTGAAGGCTG
AGCAAACACTGAACAGATTCCTTGAGAAAGGTGGAAACCCCAAACCGAAC
ACCTGGGAAATCCTTGCCAGCGCATACCTGAAGGATAACCAGTTGTCTGA
AGCTCTGTCGTGTATGGAGAAAGCCGCAGCAGTTACTAGTGCAAGCAGAT
GGAGACCAAGGCCAACCAATGTTGAGAGTCTGCTGGCATATTTCAAGGAG
AAGAACGACACGGAGAGCGTAGACAGGCTGAAGACTGTACTTGAAAGTAG
AGGATGTGCTGAGAAGGAAGAGTACAAGTCTCTGATCGACACCTATGCTT
TTGCAGGCACGTGATGGTGAACCTGACAGCATGATCAGTAAAATTTCCTT
GAAAAAAATGAATCGCCTTGCTTATAATCTGAATCTCATGATAACCCCTG
CAGCTGAGAATTCATTTGGTAAAGTTATGCTTATTACAGAGCACAGAGCA
GTTAGGCGCAGCTGTTTCCTAGAGAAAATTGGGCGGTGAGGTACATAGAC
GATAGATTTTACCTTCTTCATGGTCACTTAGTTCAGTTAGAAATTAACGG
TATCATCAAGAAGAGGCCATTTACAGGGTTCATTTGTAGTTTGTACATGT
ATATTGACATTACCATTGAGGATATGCAATCGTGCCTTTGCCATCGAAGA
GGTTCATTTATCAGAGACACTTCTTTTGACTTGTCCACTGCCTTCCTTAT
ACTACCTTACACTTCTTTCGATCACCTTCGCATGTGGTTTGTGTTGCTTG
ATTACCGAGCAAGTCAATCAGAGTACTGGACGGTGACTTAAGGGTGTTAC
TTCGCTGCTTGCTCGACACCGTTTAATTTCAGCGCTTTGGCCTGTTGCTC
GACACCGACGGTACTTGGCCGCAGCTTTCGAACTATGAGGTCCAGCTCAA
GTTTTCAAACTGCGGTTGTTTTTGTCAACCTCCTGGATCATTGCCATGTT
AATTTCTGATTGGTACATCTGTCCTGCAGATACTGAAGCCATGACAGTGG
CAAATGGAACAGCTCGGACAATTGTGGAGGACCACCCGGGGCGATGGATC
TCTTTCCTTCAGAAGATCAGTTTATCTGATTGCGGATCGCTCCCAATAAT
GAGAGTTTTTAAAAGGATGTATGTGGTCGCTGGAGTCTGGAGGGACTGCA
TGAAGGTGGGTGGTCGCATCCAGGTCCAGATCAGGATACGGCGCGCACTA
AACTAATGGTCAGATTCGATTGCAGCTTGGTGACGAGCAAGCAGTGAGCT
CAAAAGGCGAAGCTGAAGGGGGGGCCGGTGCTCGTTTATCGAAACGTCAC
CGACCGTTTCTCTTTCTGAACGAAGCTTCGGTTCAGGTTTGCGACCTGGA
GTACACTTTGCTGTGAGGTTGCTTCCTCCGAATCATATTACTTGTCGCTT
AAATGGATGTATCTAGATATGTTTTAGTGCCAGATACGTTCAATTCGCTT
AAATGAATCGAAGGGAGTATTTCAGTAGAGGACAACGTGATCGAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.