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GrainGenes Sequence Report: AA040940

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Sequence
AA040940
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA040940
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GTACTCCTACTCCTCTGCTGATGTCCCCTTAAGATCCACCCAAGCAGCAG
CATACAACCCACTCGCAGCAGCAATGGCCGCGGCCGCCGTCGTGGGCATG
GTCGCCTCCGGTGTTATCAAGGTGGTGATCCAAGAGATCGGTTCCGCCAT
TAAGGGCGAGCTCAAGCTGCACAAGAACTTGAGGAAGGATATGGAGAAGA
TGAAGATGACACTTGAGGCGGTGGAAGCCGTGCTCAGCGTCGCCGAAAGG
CGTTCTATCACGGACGAACCTACGCGCCTGTGGCTGAAGCGGCTCAAGGA
CGCCTTGTATGAGATCTCCGACATGCTTGATGACTTCAAGGCTGATGAGA
AAAACCTGGTACGAACTAGATCTGATTTTTTTTATATAATGCACTCATGG
AACTTTCATCTCTTTATCGAAAAAAATGGAACCTCCATCTGGGCTCGGTA
TAACATTGCTCCTGGCTCGGCGGCCATGCTCCGCGAACGGCGGCAGCGCC
AGTCGCCGGTCTTGATGAAGATGGATTCGATCTCCTCGTATACTGTATAA
AATTTGGTGTAACTCGGTCGACAAAAAATTCACCGTAACTGAACCCAGAC
CATCGCGTCCGGACCGGAATCAGCGGCGGCCTTCCTCTCCCCGCGTCATG
GAGGGCGGGTCGGGGCCCTCTGGCTCCTTGGCGGCGGTGTGGCTCGGAAG
CCCCTGGTCCGGCGTGACCAGGTGGAGCTGAAGGTGGCGTGGAGCTTGCT
CGCGGGCGCCATGGACAGGATGCGCCGTCGGCTGCCGTCCGGACCGGAAT
CTGGCCGTCTAGGGCCTATATGGGCTCGGGCGGGCCCCAGATGGGCTTGG
GAGGGTTAGGTGGTGCGTCTGCGGGGCTCTGTGTAGGTGATGGCAGTGAC
TAGGCTAGGATTGGGGATGGCTGCGCTGCGACCTGCCCATTTGCAGCAGG
ACGGCTAGGACTTCACGGGCGTGTTTGGGTCCGGTCTGGCCTGTCTGGCC
GTCTGGGCCTGGTGTGCCTTGGCTGCTCTATCTGATGGACGACTGCCTCT
CGGCGATGGAGATGGGTTCCTCCCGCGGGCTGCAAGGCTGTTGCCCCTCG
TTTTGGCAATGTTGTGTGTCCTCGCTGGTTAGACCACGCACGAAGAAACA
ATGTTGGTGACTTCAAGATCGTGGTGATGCATGCTGGTGGGCGGCGAAGC
TAGGTGGTGGTGCTCTGTTGCGCCAAGTTTTTTTTTGGGAGCGGAGGTCG
GGAGAAATCCCTATCAACTCGTCCGACCCTGACGCGGTGCCGCCTTCGAG
TGGCACCATTCCTTCCTGAAGGGCGCTGAGAATTCGGAATCCTCTGTCTC
CACTTTACTCTGAGTGCTTAGGACCATGGTCCATATGGGTAGCAACACTG
TGTCGACGATGCTTCCCTGTGAAGGTGCTGCTTGGTACTCGGCGCTTCAT
GGTGCTTGGAGTGTGGTGGGCCAAAGTCGGAGGGTGCAACAGTTGTGGGT
CATCATCGCTCTCATTCGCCAGTGTCTTCATTTCTTTTCTTTTGGGCATG
ATTGTGTTGTTGCCTTAGCATTTTCTCAAACACATGTATCAGTGTGGTTG
CTATATTAATATTAGCGGGGCGAAAACCTGTTTCGAGGAAAGCATGGGAA
ACAAGTGAGGCGATTGGAATTGGAAAGGATAATGATCCAGTAGAGCCAGA
GGCTGCGTCCTTCATGACCTTTGGTTTTCTTGCACGCCACGTGTCCAACA
AATTAGCCACAAAACATGTAGGCCCTACCACATACTCATCCCCATCTTAT
CTTCCCGTCTCTCCGTGCATGTTGCTCACTACTAGGAAAAAGGCTGTTCG
TGGCGAGTGCGCCACTAAGCGTACGCTGCGGCTAAAAAGTGCCCGTAGCG
CACTACCCTGGTGCGCTACGGTTATATGGGATAGGCGTAGCGCACTATCA
GGTGCGCCACGGGTAGGGGTACAGGTGCGCCACGGATGTTTTTTTCAAAA
AAAAAAAATGCAAAAAAACACTCTTGTTTTGAATTGCAAAAGCAATCGGG
TCCGCATCGCCGCCGCCGTGTCGCCTCGCTGGAGCATGGTGGCCGTGGCC
ACGACCTACCACCGCAGGGAGGTGTGGGAGGCCGTGGTCGTGCTACTCAT
CGCCGGCATCGAGGAAGAGAGGGAGAAGGAGGTGTGGCTGGAGAAGGGAG
GAGGTCGCCGCAAGGAGAAGGAGGTCGTCGATGGTCGTCGCTCGTCGTCG
TTGGCGCTCGTCGTGACTGCAAGGAGGAGGAGGCCGCAAGGAGAAGGAGG
TCGTCGCCGTCGTGACTGCTAGGAGGAGAAGGTCGCCGTCGTTGTCGCCA
TCGTCACTGCAACGAGAGGAGGATGCCGGAGCAAGGAGGAGGAGAAGTCC
ACCATCGCTGTCGTCAGTGCAAGGGAGGGAGGAGAAGGAAAAGGAGGAGG
AGGAGAAGAGAGAAGGAAAAGGAGGATAAGAGAGAAGGAAAAGGAGGGAG
GAGAATGAAAAGGAGAAGAGGGAGGGAATAGGGGTAGGTGGGCGGGGTGG
TGATTCAAATTTGAATCCCGCACAAGCTTATCCGTGACACACTAGATGGT
GGTGCGCTACGGGTAAGTTGCCCTCTTTTTTTTCTGCAGGAAAATACGGT
CTTTTGACCGTAACTTTTTACTCTTTTCGAATTTTGAAAATCTAAAAAAT
TTCTAAACGACCGAAGGTCGTTGCGAACGGATGCGAAATCTCGTTCTCGC
ATTTTGTTATATTATACGATTTTTTCGACATCGTATGCAAAAGTTACGGT
CATTTACCGTGCCATGACTTTTTTTGCAGAAAAAGTGGAAACTCATGTTT
GTTAATTTTCCTAGAAACTATACCACATTACCTACCTAAAGATGAAAGGA
TTTTATTATTTGAAGTGTTTATTATTTTCTTTTATATTTTGCAAAACCTA
AAAAGGCGATCCGAGGGGGGGGGGGTGGAGTTGGTGCAGACCACTTAGTC
GTAGGGCACTAGGGCAGAGTGCCCTACTGCTAAGTTGACCCAGCTTCTAC
AGCACACATGCCCTTAGCGCTTTAGGTCAAGGTGCGCTACGGCTAAGTGA
CACATCCGTAGCGCACCTTGACCTAGTGCGCTACGGGTATGTGTGCTTCG
GCCACATGTCCCCTGACCCACACATAGCCGTGGCGCACCACCCCCATGTG
CGCCACGCTTATGGCAGTTAGCCATAGGGCACCTATGGGCAGTGCGCCAC
GCCTATTTTATCCGTGGGGCACCACTATCAAGTGCGCCACAGAAGTGTGG
ATTACCTATAGCTGTTTTCCTAGTAGTGGCTTTTCCTTCTTCCCTGACGA
GATAACCATGGAATCTCCCATCACCAATTGATTCCTACACCGGCGCCGCA
CACCAAAGCGTTGCCGCCGTTCCCATGCCCCCGAACCGCTCTCGTTCGAC
TCCCGGTGACAGCAACGGCAACGTTACAGAGGGGCACCCAACTTGCTACG
AGAACCGTGGCACTTCTACGAGGCGCGACTACCGTGGGGAGCAAGAAGTC
CGACCAGGCGATGATGAAGCTGCGGGGTTAGGTAACGTTGCTTCTTGCGG
CTGTTGGCGTTATTACCAAGGAAGAACGAAGAACACCGTTGCTACCATGG
CACAACAGAGTTGCTGGCAATGGCACGGCGTTGCTACCATATCACAGCGG
GTTGCTGCCAACGGCTGCCACTATTGCTACGAAGGTACTACGACATTGTT
GCCACCGGCTGTCGGCCTTGCTACCATGGCATGGCGGGATTGCTGCCCGC
GGCTGCTGACATTGCTACCACGGCACGGCGAGGTTGCAGCCAGTGGCTAC
CAGTGTTGCTACCAACGGCTGCCGCTGTTGCTACAAAGGTACGATGACAT
TGCTGCCACCGGCTATTGGCCTTGCTACCATGGCATGCCGGGATTGTTGC
CCGTGGCTGCCGACATTGCTACCATGTCACGGTGAGGTTGCTGCCAGCGG
CTACCGGCGTTGCTACGAAGGCACCATGGCGCTGCTACCAATGTGGAGGT
GTAGTGCTGCCAGGGCAATCTGGAAGGATGGTCAGCAATGCTACACGCCT
GCTTGGGTGATGGGCAAGATGGTCGGCGATTGGGTGTTGTGCGAGGGGCG
GCATAGAGAGACACGAGTCGATGGCGCTACGGCGAGATTCGTAGGCTTGG
ACGCAAACGATAGTGGTGCTGCGGCGAGTCGGTGAGGTTGCTCTGCCGGA
TTTTTGACCGATGACATGCATGCGCAGGTCTCCTGTGTGTGGGATTGCGG
ACGGAGAATTTTTCCCGTGTTGAGAAGTTCAAGCGTGCAGAGTGAGCGTG
ATTAGATCGAACGTTCATGTGAGCCACGATCCAACGACCGCGTAATCGGA
AGTTACGAGCGCGGCATCCTCCGAGGGATTCTCAGCCCTGCCCAATCGAA
AAAGCATGCCTGGAAACAGCTTTGTCGCCGGCCATGTCATCACGGTGCGC
TGCCTTATTTTGGGGGTTGGGTGGATTGGGGTTGGGGACGAAATTCAAAT
TCTTGTCTTATCTATAGATGCATGTAAGTGCCACCAAATCCTTTTCAAAA
TAGAGTGCCACCATGTAAAAGCTCTATGTATAAGCGCCGCAGGCTGCTCT
CTCCGTGCGGAGGCGTGCAAAGATTCGTGCGGCTGTGACGGCTCGCTGGT
CTTAGCACGGGGCACCCACTTTCGGCGCTCTCCCGCACTGTCCAAGTTGG
ATGCTTTTGGATGTGACTGTTATGGCCAGCCGATTATCCTATGCAAAAGC
AATGCTACAATCCAATTTGCTACTGTTAAATATGTTACAGTACATAAGCG
TGACTGTGCCGTATGACTATGCTAGAGTAAAGTCTGCTTTAAACCTTGAA
CTGGTAGAAGGTGTCTGAAACAAACCTCAGATTCTCAATCCCTGAAATCA
ACACCCCGAACTCACAATTCCCTTCCTCCACAATGGCCGCCTCCGTGACC
ATTACTGTGAGATGGTCCGCATCCGAGATGCATTCTCCGCTTCCTCCATG
AGGCAAGCAAACCTATGAAGGAGAGGAGATGGGGATGATGGTTAGATGCC
ACCGGCGACTATCGTGGAACATGCCCCTACAATTTGTTGATAAACAATGA
AAGATATGTTCCACATGACAACCATATGGAATTATTATCAAATGAACTTA
GTACTCAAAGAACCTGGCAGTTGTTTTGAAAAATCGGGTAGCTATGGCTG
AACAATTTGGTAACTGTGGTAGAGAAATCAAGTAGCTACTATCAAATAAC
TTATTAATTATATAACCTAGGGGTTATTTCAAAAAATCGGTTAGTTATTT
CTAAATAATATGGTAATGGTTGCTACTATCAAATAAATTAGTAATAAGAG
AACTTTGCAATAATTTCAGAAGATCAGGTAGCCATCGCACAAAATATCTG
ATAACTGCACTAGTGAAACTGGTAACTGTTTTCGAAGAACATAGTTTGTA
TTTTGTACTTGGACGTTTTGTGAGAGTTATACCTAATAATTAGTAGTTGT
AAATTTTTGGAAATAAACAAGAGCATATAAGAAGTCAATATCACATGGAA
CAATTGCAAATAGTAGCAATATAGTACTAGTATCAGCAGTACAGTAGTAC
TAGGCCACGGCTAGCTGTGCATTGCATGCAGCTTTTTTGCTCTCGTCGGT
ATCGGAGATGCATGCCTCACTGGCTCACTGCATGCAGCTTTTTTGCTATT
GCTGCGTGTTTTACGGTCGCGTGGTCTGATGGAAACCTAGTTTCACGTGG
ATAGGTGCCTCCACGCAGAAAGATGCGGGTGCGGCATCACTAGGCAGTTC
TATCCAGCAATACATTATTTTACCATAAAACTTTATGTGCTTTTCTGGTA
CAAAAAAGGATTTTCTTCAGCTCTTCCATGGTACTCACATCAAGTTATAC
CTCTTGCAGTTGGAAGGTGTTGTCAAGAAGTTTAAGATGCCAAATAAGAT
GAAAGAGATGCAACAGAGGCTGCAGGAGATATCAGAAGACCATATGAAAT
ATAGCATTCCAGCAGAAACTCGCAGCGACAAGCAGCCCGTTCCTGATATC
CGGGAAACACCCGTGAATGCAGAAGAAACAGATCCCATTGGGAGGACTGA
TGACAAACAAAAGATCATGGGTCGCCTATCTAAGGGAACCACTGAAGAGA
CCACCTTCCTTTCCATATGGGGCTTTGGAGGCATCGGAAAGACCACCTTG
GCAAGATTGGTTTACAAGGATCCCCAGTTCAAAGAGTACTCCAAGGCCTG
GGTCTATGTGTCTGAGAAACTTGACTTGAAAAAAATTGGCAATTCTATAA
TATCACAATTATCAGAAAAGGAAGAGCAGACCAAGATAGACGAGTTGAAG
ATCATTCATGATTGCCTTGAAAAGCTACTTGCTGGTAATAAGAAGATTCT
GATCATTTTGGATGACCTGTGGGAGAAGCGTCCTTCTGAACTTGAAAAAT
TGAAGGTTATGCTAAAGCAGGCTGAGGGGAGCAAGGTGATGGTTGTGGTA
ACCACACGCGAAGAAAGCACTGCAAAGGAATTTGGTAGTGTTGATCCATA
CTGCTTAGCTCCTTTGACAGATGAAATGTGCTGGAATATTATTAAACAAA
AATGCAACTTTGAAGCTTGTCCTTACAAAGAACGTTTCGAGCCGATTGGA
AAGGAAATTGCAAAAAGGTGTGGAGGTGTGCCTTTAGCTGCTCAATCACT
TGGACACATGTTAAAATACAAGCCATATGATGTGTGGGTTTCGGTCAGGT
CCAACCATATCTGGAATCTACCTAATGCTAGAGATACATCATCCACACAT
GAAGTGCTTGCATCCTTGTTGTTAAGCTACAACTTCATAGATAATCCATC
CTTGAAGTTATGCTTTGCTTATTGTGCAATCTTTCCAAAAGGTCACAATA
TAATTAAAGATGATCTAATTCATCAATGGATTGCTCTTGGATTCATGGAG
CCATATACTAATAATATATTATCTACCTGGCAACTCGGTGAGAGTTATGT
TAGGCAGCTTCTGGAGATGTCATTTCTGCAACATTCCAAGGTGAGTTAAC
TAATCCATACCTCCAACAGTAACTGCCGCATTATTTTAATCGATGTAGTG
CACTACAACTCACATATGACGTGGATTTATTTTTAGAGATATGTTGAGAG
TTTTTTTTTTGTGTGTGTGTGGGGGTGGGGTGGGGGGTGGGGGGGACAGT
TACATGCTGTATGGTTGAACAACCACTTTACTACTTCTGTTTTTAAATAA
CCAATGTTTCAAAAATGTACATGTTACATAGAATCTTTGATCATTTTTTA
ATTCAAGACCTCCACACCACCCCCCTAGACATTTGCTCTTTGGATTACTT
GAACTCCACACCTTTAAAACAGTATTCCACCCTTGACTCCTCACGCCTAG
TATTTGCAAACCTAGTCAAATAACTTTCTAAATGTTCTTAATGGTTCGCT
AACAACCAAAATGTCTTGTTAACCGTGAATCTGTGCAAGCTGTTGTGTAG
AGCCATTTTTCAAGTTTTGAAGTTCCTATTTTGTCTCATTAATCCTGTGC
AGACCGTCGCAGAACGTTTCTACGCAAGAGAAGATGATACATTATTCACC
ATGCATGACCTGGTGCATGACCTCGCAAGATCGGTTATGGCTGACGAATT
GTACTTGAAGGGCCCCAATTGCCGCTATGCATGTCTTACAGATTTTACCA
AGCCATTGAAGTCATCCGCTACTTCACCTGCAAAGATAAAGGCACTGCAT
ATTGTGGACCATCCTGATGATTGCTTGAAAGAAAATCAGTTCCATCCTGA
TGCATATTCACAAGCTAAGCACCTCCGTGTCTTAGTCCTAGATGTAAGCC
CATACTCTTTAAGGGAGTTGCCATCTATTGGTAAATTGAAGCAGTTGAGG
TATCTTAGTGTTCCAAATATCAGTGGTCGAATGGATCTGAGGTGTATCAC
CCAGCTCATAAAATTGAATTATCTCAACCTTAGTGGTTCTAAACATCTCT
CAGGATTGCCCGAGTCAATTAGTGAAATCAAAGGTCTGATGCATCTTGAC
TTATCGTATTGCCGAAATCTAAAAGAACTCCCATTGTCATTTGGCACGCT
CAGAGAGTTGGTATACCTGGACTTATCACACTGTCGTGGTGTTTTAGGAA
TACCAGAAGCTTTGGGTGGTCTTACCAAACTCCAACATTTGGGATTATCA
GAATGTAAAAATCTGAGAGGGCTGCCAGAAGTCATCGGCAGTCTTACTGA
ACTCCGGTATTTGAATCTAACAGGATGCATGCATTATATCTTTGCCAGCT
CATCGGAAAATCAAACGGAGAGTTTCATTCACTGTATATGCACACTTCCC
AATATGCAACAGCTGAACTTATCTCGGAATGAATATTATCTTAGTATACC
AGGAAGTGCCCGCCGCCTCAAGAAGCTGAACCTCTGTGGGTGCAGCAATG
TTACTGGGCTTCCAAGGTATGCGGCTAAAATGAATGGAATCATCTCGGAA
CAGCTGGAACTTGAGCCTATTTTTTCTGTATATGCATATGGTACTGGATC
TAGGAGTAACCTTTACTTGCTTCAGCCTATACATCGTGACGTGCTGCATA
TCGAGATGCTTGAAAATGTGCAGTGCGCAGAAGAAGCAAACAGTATAAAT
ATCAATAAAAAACAGGAAATTAGAAAATTGACATTAGAGTGGACCAGAGA
TGCTAACAGATGTGTGGAAGACAAGGAGTTGCTGAGGGAGCTAGTGCCAC
CAACCAGTTTAAACGAGTTTATGATAGAGGGTTACAGTAGTGTAGCTTTT
CCGGACTGGCTCATGAATATTAGCAATTATCTCCCTAATCTTGGCAGCAT
AGTGATGTGGGATTTGCCCAGGTGTAGCCGTCTACCACCCCTCGCCCAAC
TACCAAACCTCCGAGTGCTTACTCTGAAGGGGATGGAAAGCCTGGAAGAA
TGGAACACAACAGATTCTAGTTTGAGTGGGCCTATGTTCCCTATGCTTCA
GGAAGTGAATATACATTGTTGCCCCAAGTTGAGGATAAAACCACGACTTC
CTAGAGCTGCATCTTGGAATATAAGCGGAGGTGGTAATGTGCTCACATCA
TGGGGAGAGATCGCGTCACACACTGGTGCTTCATCATCTTCTTCTCCAGT
ATGTACTCATCTGTCAGTTCAGTACACAAATGTGCCTCTATTACAGTGGA
ATTTACTTCACCACGTACCTTCCGTGAGTGACTTAAGAATCGAATTTTGC
AGTGATTTGACGAGTTCCCCAGAGATCATCCGGGCCCTCCGCTCCCTCAG
ATCACTGACACTGTCATTCCAAGAAGGACATATGGAATGGGTAGGTGAGC
TCAGGTCTCTTCAGCATCTGACAATACAGTACTACTGGAAGCTAGAGGAA
TTGCCCGATAGCATGAGACAACTCACACAGTTACAATCATTAACTCTGCA
AAACTGTTATAGTTTGACATCACTGCCGCTATGGTTAGGAGAACTTGCCT
CTCTCAAAAGACTTCTAATCAGGAGCTGCCATGCCATTATGAGTCTGCCA
GAAAGTCTCACAAGTCTCCAAGAGTTAACTATCTATGACAGCGGTAAAAT
CACGACTCTGCCGGAGAGTCTCACAAGTCTCCAGTGGTTATCTATTAAAT
GCTGCCCTAAATTAAAGAAGTGGTGCGAAGCAGAGGAGAACAAGACGAAG
CTTGATCACATAAAAGGAAAGGTATGTATGTGCCCTGCTGAAAACTATTG
ATCATATAGGTATTGCTCGTATTTTTTACAGGATAACATATTCCGTCATG
TTAAATGCTTCATTGCAATTTAATTTGTGTTTCAACAATGGAATATTGTT
GTCGAAAACGTAATAAAGCAACAGAGTTATTTTTTTGGTAAAAGTAATAG
AAGGAAATTCTAAGGTATAGCAAAATATGTCCTAGGCGGTCCAAAAGATC
TAGTGATGGAATTGTTACCAAGAAATTGAATAAAAAACTATATTAATACC
TGTTTCGAACTTTCAAGGTGATTCTTTCATGGAAAATGCCTTCATGCTTG
TACACATCTACTCTCTTTGTAATTATTTACACATATGAACAAATTTGTAT
TGGTCTGATCAAACATTTTCCTTATGTGTACTGCTTACTATTCTTTGTGA
GCCCAAATTCAAGATAGTGATACTGCAGACTTTATATTCTTTTGCAGGTT
CTTGAATATTAGTGGGGACGTTTCGTGGATGTTTGACACGCAAGTCTGGC
GATGATGGCGCTTCTTCCTGCAACATATTGATGCTGAATTTCGTAAGTTG
CAATCTACAGGAACTGCCAGAACTGTATCTTCTGCTATCTGCCAGGATAC
CTTAATTTGTAGAGAACAAATCTGAGGAGAGGAGGTTCCTTGTTGTTTTC
TTCTCCCACATCACACTGCGTAACCATCATCAGCAGAGGAGGTTCCAAAG
GGATCTCTGCTGCAAAGTAGAGAACACTGGGGCACTTCCATAAATCTTGT
TAAGGCCTAGTTACCCGTGAAATGAAACTGCGTGTGAGATATAATCCGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.