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GrainGenes Sequence Report: AA008344

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Sequence
AA008344
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA008344
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCCAATCGACGATCGACATGACCGGTGCAGCCGAGGTTTACGACTGCGC
GGCCGCGTTGGCCGAGTTCGACGCTTCCCGCGCCACCGTCCGCGACCTCG
TCGAGTCCGGGCTCGCCTCGGTGCCGCCTCTCTTCATCGCGCCCAGCAGC
ACTCCCAAGCATCCACCAACGGACATCACCGTTCCAACCGTTGACCTCTC
TCTCCCGCTCTTGGCCTCGGTGCCTCTCGTCGGCGCCGCCGCACGTACGT
GCGGCTTCTTCCACGTCACCAACCACGGAATCGACGCCGGCGCCGCCGTG
TCCGCTGTTCGGGCCTTCCACGAGCTGCCTGCGGCGGTCCGCTCGGCGTT
CTACTCGATCGCGGCCGTGGAGGGCATGAGCTACTCCACCGTCCCCTACA
TGGACCGCGACAGCCTCGATGGCCCTGGCCCCATCCTCCCATGGCGCGTC
TCTCTCCGGGTTCTGTTGCAGGCGGCCGACCTTGGCCGTCTCCCCGCGGC
TTGCCGGGACGCGCTGGTGGACTACCTGCGGCGCATCGAGGAGCTGGGGA
AGAAGATGACCTGGCTGCTGTCGGAGGCGCTCGGCGTCGGCGCTGAGCGG
CTGGAGACGGCCACGCAGGTGGAAGGCTGGCTGATGGCGTGCAACTACTA
CCCGCCATGCCCGGAGCCCGCACGGGTGGAGGGCGCGGTGGAGCACACCG
ACCCCTCCCTCTTCACCGTTCTAGCACAGGACTCCATCGGAGGGCTCCAG
GTGCGCATCAACGGCGGCGACAATGACGGACAGTGGGTGGACGTGCCGCC
GGTGCCGGGCGCACTTCTCGTCAACGTTGGGGACGTGCTCAAGGTAAACG
CCATATATAGAAGACAAAATTATTCATCAAGTCTTCTCTAACGTAGAATG
TACATATCCAATATCTGTTTTCCATCTACAAAAAATTACAGCTTGTTTCG
AACAATGAGTACCATAGCGTGGGCCACAGGGTGATGATCAAGTCTAGCCA
AGATGCCAGAGCCTCTCTCGCCGTCTTTTTCAATCCTGCCATGCGCGGAG
ACTCCAAATTGTTTGGTCCTCTCCCGGAGCTTATCACGACAGAAAAGCCG
GCGATGTACCGGAGTTTCGCCATGGCTGAGTTCATGGATTCAAGAAGGAA
GTTCGGTAATGGTAAGTTGTCGACCGACCACTTCAGTGTTGCTGATGAAT
GAAATCATCCTACTACTCCTTTTTGTCCGTTGGGACCTGGCTTCAAGTTT
GGAGCGGGTTATTACATTTAGGAGTTCCGTTTTTGATGTACAGAGTGATT
GAATAATATATGAAACAAAGAAATGGCAGTGCCTCGTGTGTTTACTGCTT
GTGTTTGCGGGAAACAAAGAAACGGCGTGAGCGTGTGTTTGTGTGTTTGC
TCTTAACAAAAAAAAAATGGGAAGGACTGGACGTCCTCCGGAGGAGGCGA
GGTGTAACAGCCTCCGACTCCTAGTGCTGCCACGTGTCTATTTCACTCCA
AAATCCCACTTTTGCTATTATGTAGCAAAAAATTTACCTGTTTTTTTACC
TATAGCAAAAAAATCGTCTATAAAAATATAAGAGAAAGATCGACTTCGCC
GGTGACCTCACCAGAGATCTCACCGGAATCATCGTAGCAAAAAAATACGC
TAATGTAGCAAAATCACATGATGGTTGTAGCAAAAAAAAGTTCGCTAAAG
ACATCGACGAAGACCTCGCCGGAGGTCACGTAGTAAAATTTCTTTCTAAT
GATGCAAATTCATAGAACGTATTGAGCAAAAACAGTATACTATTGTAGTA
AATCTGACTTCACAGGAGACTCTCGCCGGAGAAAATTATACTGGCGTAGC
AAAACAGTGTACTAGTGTACTACTTTTCATATCTGATTTTTGAACAAGCC
CACTTTGCAACAAAACGAGAATACAGTGTTGCAATGAGCATGCATAAGAC
CTTATTGTACATAGAAGTATAGTCTCACTGAAATATTACCTAAAATTTTG
TAAGGAGGGATGAAGACGGCGTAGCTCCAACATCTCCGGGCACATCTGCT
TCCACATCCATGCCCTTTCTTTGCCATTCGACCCTGGCCTTCTACTCCCC
TTTGGCCTTTCTAAGTCATTTTTCGTGTGAGTTGTAGCGATATTTGTAGA
GGGAGTTAAAAACTTAATCAGCATATTCAGTTTTTTAATAAATTATAGAG
CATAAGAGAAATAAAAAACATATGAATCATCTACTATGCTGCTTGAAGAA
ACCATCATGATATTAGTTGTGTCAAGTCCCAAGAGGTTTTCATGCCCTGT
CTCTTTTCTACCCGTGCCGATCCTTGTGCGCCGCAGATGACCTTTTGATA
TGTTTTTTTTTTAATTTATTACACCTGCATACTATCTACGCATGCAGATT
AGAAAGGGCACAATTATACACGGATGTGTTGTGCTTGCGATTGACTAGCA
CGATTTCCCTCTATTGTTTCTATTGTTTATCTATTGATATATTCTATTTT
GCTATTTTTTTAGAAAAGGAGGCATTCCTCGTATACTTTAGTTGTCAATC
GGTTATTCCATTGTGCTACATATAATAATGGTGGAAATAGCAAAGATGTA
AATATTATGATTACTTACTATAATAATCAATTATCATATGTATTTTTGTT
TTGAGTTCTCATACTATTCATTTATATATTTCTCTTCCACACAAAAATAT
AATCAGGCGGGTACCCATCTAGTCTTTAGATATGGGTTGTCCATATCTTA
TCATACATTGTAGAAGACGTATAGCTGAATCCTATGCCTCCACATCTAAA
TCATAGCTGCCCTCTATTACCGATTCGAGCTCCTCTCGTGGTCTCACCCC
CATTGTCGCCGATGAAACCACGCCCCACTGCCCATCTAGAGGGGTAGCGG
ACTGGCGGCAGCACACCAAGGTTTTTCCCTAGTCACGAGAGGATGACTGG
AGGAGCTGGGGTGCGAGAGAGCAACAACATCAAATGTGGCGGCGCGTCAA
GAGGGATGGGTGCAGGCAGCAGGGACGAAGGGTGGGTTGGCATCGACCAT
AGTCGAGGCCAATTTTGTGTATAGGTGGCTCTATCTTTTTGTGTGTGGCT
CTATCAGAACCCTCCATCCGAGATCGTGATAGGGTTCATATCATGGAAAA
CAAAAAATCTTACGCGCGAACCACTATCTTTTTTTTCGAAATGGGGGATT
GTCACACTGGCCTCTGCATCAATTGATGCACACAGCCTATTATTAAAAAA
AGTATAACATAGTTCTTTTACAACTCACGAATCAGCCAAAGTTGCCACAA
AAATCAACCAGCGAAATAAAAGAAATATATAGCAGCTAGACATCTAGTCT
ACTAATATGCGGCCACCGAGCCCGACTGAAGATATCCTGAGCGACCGTCA
GGAGCCGGGTGCAACCAGAGACCATGGCATCTCGCTGCTCCGTAGGAAGA
AAATATGCCCAGATCTGTACCCAATGCGCCAACATAAAGATAACCTGCAA
AAAGTTAAAATACCGCTTGTTGTTAAATATTATATCATTCCTACACCTCC
ATATGGACCAACATAAGGCTGAGACACCTATGCGTACTCTGGCCTTAGTA
GCATTATCCAACCCATTTAACCAATTGCCAAACATATTGTCAATATTAGT
CGGAGGTAACAAATCATAAGTAATAGTAACAATGCGCCAAATAAAACGAG
CAAAAGGACAAGACAAGAACAAATGTTCTACAGTTTCCGTTGAACCGCAG
AAGCAACATCTTGTACATCCCACCCAATTCCGTTTTGCAAGATTATCTTT
TGTAAGAAGAACTTTATTATAAAGAAACCACATAAATATTTTGATCTTTA
AAGGTAGCAACGAGATCATCTACGAGATGGTAGCAACGATTAACTCACCC
TCGAAGACCGTAAGAGAGATTACGTTCCCGCACAAACGTTATCAATGAAG
GTGTACACGTGGCGTTCTCAAGACCGGGTACTCACGGCGCCACAACCGGA
GTCACCTCCGTACTCGGCCACACGTGCGGCTCGTTGACGTCCTCCACGCC
CTCGGTCCAGCGGGGCAGCGGAAGAAGGGATCCTCCAGAAACTCCTACTC
CACTTCTCAAAGTGTAGACTTTGAACTATTTTGCGGCATATCTTCGCTAA
GAAATGACAATGCTGGAGCAAAAATGGAGGGAGAAGGAGGATCAAGTGTG
TAAAGGAAGTGAGGAGAGGTGGCCACCTTTTATAAGAGAGGAGGGGGCAG
CCCCTAGGGGTGTAACCTCCCCCTCTTCATGGTGGTAACCTCCTCCATCA
AGTAGGTAACCCCCTCTCTTATTCTCCTTTTAGTTACATGGCATTCATAA
CAATTAAACCACACTTATGGAATTAATAAAACATTTTTATTTATTTAATA
TTTGTTAATTCATTTAATTAACAAATATTAACAATTACCCCTTGTGTTAT
TTCGATATTCTGAAACAGTTTTGATGCTTTTCCGAAACAACCCCTATGTT
ATCCAATAATTCAGTCGAAGTTCCAAATCCACTCAAAACGAGTCAGCGAA
CCTTAATTGTGTCCCCCTATGGTTAGTGAATAATATGGACATGATCGAGA
CACCTCTCCGATTAATAATCATCAGCACGATCTGAAAATCCGTAATGACT
CCCATTTATTTAATGATGGATCTAGTGATCATGCGAACCATTAACGTTGT
AGTCAATTTCTTTTGTCTCGCGATATATTACTTGTCCGAGATCCGATCAT
TTGGTATCATCCATACCTAGTTCGATCTCATTACCGATAAGTACTATTTA
CTCATTTCATGATATAACATTTCTTGTGATCAAATCACTTGCTTCCAAGC
TGTTATCAATGTGATATCACCGAGAGGGTCCAAAGTATATCTCTTTGTCA
TGGGATGAACAAATCCCACTCTTGATCCACGAGTCTCAACTAACACTTTC
TAAGTATCCAACAACATCTTTATAATCACCCTGTTACGGTGTGACGTTTG
GTGGAATCAAAGTACTCTTTTGGTGTTAGTGATTAACGTGATCTCATGGT
ACATCAATGAACGTTGATTGACTTGATTGTATTGCTATTCTTACTATGGG
TGTAAGTTCATCATATCATTTTCAAATGACATGACCTTGTTATTAACAAC
ATCCAATATTCATGATCAGGAAACCTTGATTATATGTTAATCAACCTGCT
AGTGTAATGAGAGGCATTACTATAAACCATTTTCTTTGTTTATTAAACAC
ACATGTATCAACGTTTCCAGTTAACACAATTATAGCATGAGAAATAAACA
TTTACCATAAACATGGAATAATATAATAACCATTTTATTTTTGCCTCTCA
GGCATATTTCTTTCAGTCTTCCACTTGCATTAGAGTCAATAATCTAGTTG
AAACTTGCATATATAAACACCTATGGCTGGTGTTGTATATACGCATTGCT
AGTGGTAAACCTAATCTCTAGATTTGACATTTTCAGATCTATGTGTATTT
GCATGTCTTTGCGTCTCTACACATCACTCATTCTTAAATGAGATGGCATT
GTATATATTTGGTCCTTTTTGTGAGATCTCAATTCCTTGATGGTTTAAAA
CATGTTCATACTATTGTCGTACGATAGATCTTCATAGTATTATCCCGCTT
GAAACAACACCGAGTTTGATTAATAAACTTCTTGACATAAATGCCCTGTT
TAGCTGCTACTAGAGCAGCCATATACCCAGTCTTTGTTGTAGTATCCGTC
ATAAGTCTTTTAACTTTGGAACTCATCCAAAATCATCAAGGAACTTTCTT
TTATAACATTGTGCTTGTAAAGTGTTACATTGGTACTAGCTTTGTCACAA
GATACAAATTAAATTTATTCATGATAATTATATGTAGGGAAAGAAACACC
AAAGGTGTAAAAAAGTAAGGAGGCTCATAGTCTTGTTTTGCCTTCTCACA
AGATATCCACGGCTGCATGTAAGTAATAAATTATTTAAATTGCACATCTA
ATTTTTTCTATTTATATTTATAATTCTCACATTGAAGAATATCCTATACT
ATATTTTCGGATATTCTAAGCAATACTTGCAAGAGCGAAAGTGCCCCACC
AGCAATGTGTGGCATCGACTCTTTTGAAGAAGTGATATCACGACCGGAGT
GTTCATGCTACTGCGTGGTACATGACAATGGTGACCCTAGCATAAGTGGA
AAAACCTACAATATCCGTTTTATGCTTGCAAGGTACATCACCAGCGACAA
AACTGTTAATCAAGAAAAGCTATAGTTTTTATTGTTTTTGTGTATCTTCT
CGTTTGTATAGCTACAAAATAAAGTTGCATTTGCATAAAGTGTTCAGCTG
GGCATAAATCTGCTTATTATCATGGTTCTGCAGGTACAACCGAACGGTTC
ATACAAAAATGTTTATAATGTTCAAAATGAGCATACAAGTGGTTCAAACT
AATCATGTGCGAAATGAGCTGAATATATGTGATGAGACAACATAAGTCGT
TTGTTATCATAAAAAAACATAAACGCTTGAGTAAGAAAACTTGTTTGTGA
AGGCCTACTATTCGAAGATGATTTGGAAAAATAAACTATGCGCAAAAGCT
TATCCCTTCATACGGTTAAATGCGCTTCAGAGACGCATCGCTCACCCATG
GTACAATGGTTTGATAAACCTTGCGTAACAGAGAATTTCAGCCGCGTGTG
TCAAGGAATGAACTTGGGTAATTAATTTAGGGAGAGTCTATTGTACAACC
AATTGTTTTGTAATTCAGAAACAAACACTTTTTTAACCCAATGAAAAGTT
CACAACTTTCATGTAATATCAAAAGAGAGGAGACTCAAAAAATCGTCTGT
TTCATTTACTCCGAATAGTCACATTTCAGCCTCTCATTCTATGAGTCCAA
CATCTTCTGATTCCAATTTCTTTTTGTTCAGTGTTGAGTCCTATATTTTC
TAGTGCAGTTTACACACATTCTCCAAAAAGGACAGAAATGTACAAAAGGC
ATGAAAAAATCCCACTGAGACAAATACCTACCAAGCATTAAAAACGTGAA
AAGAACAAAAATCCCAGTGTAGGTAGAAAGTGTATCTTCTTCTCCGGCAA
GAAAACCACGCCGCTTGCCATCAACCAGCAGATCAACTCGACGACGACCC
TCCAGGATTGGCGATCTCTAGATTGACAGATCCACAATAGAAGGACATAA
GTAGAAGAGGGGTAGGATCAAGCCTTAGGATGGAACAAGAAGAAACAAAT
ATTGACAAACATGCTTTGCCGAGTCACATACCTGGCAATAAGTACCGCAG
TCCCATGTAAGATCTATTTTGACTTTGCCAACGATCTACAAACTAAAAGG
TGCGATGTTAGCTAATTAAAATACAAAATCAGGATAAAAACTAATAAAAC
AAAATTATAGGGAAAGATGTGTTCAACAAATACATTTAGGTCTGCAGTGT
ATGGGTTTAGATCCCCCGTTGATTGGATGATATAAAATAGTAGACAAAAT
TAGAACAAGTATAGAAAAAGTCAGTCCCATCTCATTCTTGCATTTCTTTT
GAAAGCGCATAGGTTTCCTCTAGGTTAAGAAAAGGTTCCTACATTCTTCA
TATTTGTGATAGACATATCTACAAGGCAATAGGGTTTTATGGCATTACAT
TTATTACTCCATGTAAATATGATGTCATATGATAATAGTTAGAGGTAGTG
TAAGTTATTTTGGTAGGAATTATACACTTTTTCCTAGATTAACATGTTAT
ATATACTTTCTAAATCCATCGAGCGCACTATATTGCATATTGTAAAGAAT
CTCTTTTTAGTAAGGTAAAAAAAGGTTTTGTATGAAAGTTCTTGATAAAA
AAGTAATTGAATGTACACTTACTCCACTTTTAATAACTAATGTCCTTTTC
TATTGTGTACAACAATATAATGGTGGAGTTTGTTTTTGTTCAACATATAA
ATCAATTAGAGTAAGTGACACTAAAACCACCAACGAAACTACACAAAGGT
TACACAATTTATTTTCTTGTGAAATACTGGTGTTAAATCAAACATTCTTT
TGATATAATGTAGGAACATTCCAAGGTGAGTAAAGTTTGCAAAGATAGTT
GGTCTTCTCTTTTATGTCATGCTTTGCATTTTTATGCTCATTGTTACAAT
CTTATAATTTATGAGATCCTACCAATATATTCACAAAAATAATCCCAAAT
TATGAACATTCTTGACATCTTCAAACTTTTGGTGTGAAGTAGAAGTCATA
TTGCATCCTTCTTATAAGTATATTTCAAAAAGTAACTAAAGTTAACTGCA
CTCTAGGAGACAGAAAAATCAAGAGAGAAACATTCATAATGTAAATTAGT
TGAGATTACCACAAAATATTGGATCTGCTTTCACAACGATGTAGTAGTAT
TTATTAAAATATGTTTATACATTTCTCTCTTAATGAGATATCCTGGCCCT
AAGTGGAGTTTTAGTATGTGTATAATCTTGGCAGTATCTTATAATGTACT
TGCATAATCCCTATTGTAATGTATGGTATAAAAAAATCAGTTGGTAAACA
TATGTTCTATGATTACTCTGCATTTTGTTTTGCATTATGAAAGCTATACC
TTGACAATCTTTATTATTAATCATTCTATTGCTTTTGTTACATAGTTTTT
TTGGAAACAATGAGATAATACAAATCACGATAGATACATGATTCAGACCC
AACAAAACCTTAGACAATCTAATCTTGCCATATTCTAATACATAAACAAT
TGGTCAATAAGTGATTAGGCAAGAATATGAGCAACAGTGGAGGAGTACAT
GCATGACCATTGATTGCCAGAATTGAAGCCTATGGGCCTGGCAACCATTG
GTTTGTTAAAATCCAGTTGTACATACAAGCAAGCATCTTTACAAGGAGGG
TATGAACAAAAATACAAGATTGTTGTGTCTAACCATCCACAAAATAACAA
AGAGTTAGAGTTAACTTGGCAGACATGCAAATTATGGGATAGTTCTTTGT
GTCTCTACCACTCCATGCCTTCCTATACAAACTCTATATATAGAAGAATT
TTGTCACAAGATATTTTATAGAATATATTTTGTAATAATTTTTATAGAAA
TCCAATAAGAGTTAGGTTACATCATTAATAATGCATGCATAGTAAAAATA
TTATGTATCCAGTTGTGCATACATGAAGTATCTCTAGCTACGAGGAGCAT
ATGAAGAGAAAAGTATAAACATATGGACCAGATTGTTGTGTGCAACCAAG
TAAAATGACAGTGATTTCGAGCTATAGATCTATTATACAGAGCACAACAG
AACTAACCTAGAGGACATGCAGATTTCAGATAATTAATTTGTTTATTTGA
AACTCCATGCTTGAGTATATAAGAAGTATGAAGAAAAATATCATTTGATT
TTTGCAAACCATGTTTCCAAATTTTTATTATCATTTTAAAATAAAGATCA
AAGTTGCATGAAAATACGTTATCCAAATTAAAAATATATTGTATTTCGAT
GAAGAGTGTAAATATGAGGTCAAACCCAGACGCAAATGCAAGGGCCACCA
TGCTAGTCTGTTTCTGAATTACAAAACAGCTGGGTGTACAATAGACACTC
CATATGAATTTGTCAGGCATCGCATGAATATCTTAAGCCCATATCTTAAG
CTAAAGACAGTGGTTGGGCTAGCTAGCATCCCGAATTGAGATGCTGCTGT
ACTTGCTCGCTTGTCGCCTTCTCTAAAAGAAAATAGAGTGTAATTGTTGC
GTAATGATTGATGATTTGTCGAGGCATTTACTTTCAATAATCCATTGAGC
TGACCAACGATATTATATAAGTGAAGAATTCCCCGAGGTGGCCTCAGCGA
CCCAGTAATCTACGTCTCCAATCGACGATCGACATGGCCGGTGCAGCCGA
GGTTTACGACTGCGCGGCCGCGTTGGCCGAGTTCGACGCTTCCCGCGCCA
CCGTCCGCGACCTCGTCGAGTCCGGGCTCGCCTCGGTGCCGCCTCTCTTC
ATCGCGCCCAGCAGCACTGCCAAGCATCCACCAACGGACATCACCATCCC
GACCATCGACCTCTCTCTCCCGCTCTCCGCCTCGGCACCTATCGTCGGCG
CCGCTGCGCGTACGTGCGGCTTCTTCCACGTCACCAACCACGGAATCGAC
GCCGGCGCCGCCGTGTCCACTGTTCGGGCCTTCCACGAGCTGCCCGCGGC
GGTCCGCTCGGCGTTCTACTCGATCGCGGCCGTGGAGGGCATGAGCTACT
CCACCGTCCCCTACATGGACCGCGACAGCCTCGATGGCCCTGGCCCCATC
CTCCCATGGCGCGTCTCTCTCCGGGTTCTGCTGCAGGCGGCCGATCTTGG
CCGTCTCCCCGCGGCTTGCCGGGACGCGCTGGTGGAGTACCTGCGGCGCA
TCGAGGAGCTGGGGAAGAAGATGACCTGGCTGCTGTCGGAGGCGCTCGGC
GTCGGCGCTGAGCGGCTGGAGACGGCCACGCAGGTGGAAGGCTGGCTGAT
GGCGTGCAACTACTACCCGCCATGTCCGGAGCCCGCACGGGTGGAGGGCG
CGGTGGAGCACACCGACCCCTCCCTCTTCACCGTCCTAGCACAGGACGCC
ATGGGAGGGCTCCAGGTGCGCATCAACGGCGGCGACGATGACGGACAGTG
GGTGGACGTGCCACCGGTGCCGGGCGCACTTCTCGTCAACGTTGGGGACG
TGCTCAAGGTAAACGCCCATGGAAGGAAGAGAAAATTATTCTTCAAGTCT
TCTCTAACGTGGCAATACCTAACTATATTATTCCTTCGAAAAAATTACAG
CTTGTGTCGAACAATGAGTACCATAGCGTGGGCCATAGGGTGATGATCAA
CTCTAGCCAAGATGCCAGGGCCTCTCTTGCCGTCTTTTTCAATCCTGCCA
TGCGCATGCGCGGCGACTCCAAATTGTTTGGTCCTCTCCCGGAGCTTATC
ACGACAGAAAAGCCGGCGATGTACCGGAGTTTCGCCATGACAGAGTTCAT
GGATTCAAGAAGGAAGTTCGGTAATGGTAAGTTGTCGACCGACCACTTCA
GAGTTGCAGATGAATGAAATCATCCTACTCCTTTTTGTCCGTTGGGACTT
GTTGGCTTCAAGTTTGAAGCGGGTTATTTACATTTAGGAGTTCCGTTTTT
TATGTACAG

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