Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA036563

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Sequence	AA036563
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA036563
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CCCACCGCGCCCAAAGCCCTAACCCCACCATTCCTCCGCCGCCCATGGCG CCCCCCCGCGCTGCCAAGCGCCCCAAGCTCGAGCCCTCCTCCTCCTCCGC CGCAGGCCCCCCCGCCGCGCCCCAGAGGGGCGAAGACGACTACGTGCCGG GCAACATCGTCGAGATCGAGCTCTGCAACTTCATGACCTACGACCGCCTC GTCTGCCGCCCCGGCCCGCGCCTCAACCTCGTCGTAGGCCCCAACGGCTC CGGCAAGAGCTCCCTCGTCTGCGCCATCGCCCTCGCCCTCGCCGCCGACC CCTCCATCCTCGGCAGGGCGTCCAGCGTCAGGGCCTTCGTCAAGCGCGGG GAGGACTCCGGACACGTCAGGCTCTCCCTCCGCGGCGACGCGCCCGGCCG TGACATCTGCATCACCCGGAAGATAGACACCAACAACAAGTCCGAGTGGC TCCTCGACGGTAACCCTGTTCCCCCCATTTATCATTTGACAGTATCATGC ACGTATTTTAATTCGGCAATGTGTGTATTTTCTGCTCAACAAAATGGATA TTCCGTTCCTGCAGGTGCCACTGTCCCCAAAAAGGAAATTATAGATGTCA TCAAGAAGTTCAATATTCAAATTAACAACTTAACTCAGGTGTGTATCTCA TGTTTGTTTTCTTTTCCCCATGAGAGCGACTGTGAAGCTACTATACCTGA CGATGGTGATTGTTTCTGTTGCTAGTTTCTGCCACAAGATCGGGTATGTG AGTTTGCGAAGCTGACTCCCATCCAGCTGCTAGAAGAGACCGAGAAGGCC GTTGGTGATCCTAATTTACCCGTTCAGCATCGCCAGCTCATAGAAAGGAG CAGAGAGCTCAGGATTCTCGAAGTGGTAAATATCAACATTCATTTCTATC TTATGTTTGCTTCAACATCTGAAGATTTTCTTGCTCCATACGTTATCATC TTTTATTCTCTAAGCTACGGAGTTTATATCGAATTTCAGACTGTAAAGCA AAAGGAGCAGACCTTGAACAATCTAAAGGCTCTCAACGCTGAACAAGAAA AAGATGTCCAACGTGTCAGGCAAAGAGATAAGCTTCTGAAAAAGGTCCGT TTTATTGTTTGGCTATGAATGTTATAGACAGTAATTTTATCACGATACTA TTGCAATACTGTTTTGGTTGATTGTGCCCTAGGCTGAGCTAATGAAGAAG AAGCTGCCATGGCTCAAATACGACATGAAGAAACTGGAATTTCAAAATGT ACAGAATGAAGAAAAAATCTCCAAGAAGAAAATGGAAGAAGCAGCCAAGA TCTGGCAAGATGCAAAAGCCCCGATCGAGTATGTACAACAGTCAAAAGGA TCCAGTTCAGTTATTACTTTTCTTCACTTGCAAATCACTCTCTAGATGTT TCCGGCAGTCCCTAGTACTGCATGGTTTGGTGTTTGTCATGGCGTGCTTC TTTTGATATCCCTACTATGTACATCTGTCACTTTTGAACTAATATTCTTT CAACACCTTTTAGATATCATTCCTTCTTAACTGGAACTCAATTTGTGATT ACCCCAGGGATATAGCAAAATGCTAATATTTTGACATTGCATTTCTGGTT CAGTAAAAGTTTCTCCTTCACAATTTAGCTTTGTCTGACTTACTGAGATG TTTGATTTCTAATGGAAGTGGAACACACATCTTCTTGCTCCTCTGTATTT ATGTAGAGAGATCAAGAAAGAGAAAATGACTCATGCTTCAAGTACCAAGA AGATAAACAACCAAATAAATCAAAACACAAACAAGCGTCGGGAAGTTACA GATGAGGAAGGGCAGCTGGTATGAACTCTTCTTTTTTGTTGCCCAAATCA GCTCCTTAGTGCAGTTTTTTCTGTTGTCGATCCTTTACACCTGTTGTGGT ATCAGATTGCACGATTGAAAACCACGTTTGATGACATAGAAGATCTGAAA AGGCAAGAAAGATCTCGGCAACAAAGGATCTCAAATGCTAGGGAAGCTCT TACCACTGCTGAAAAGGAACTTCAACATGTACAACCATATGAACCACCTA GAGCTGAAATGGTTAGTTTAGTTACTTTGTTTTCCTGACTTTTTGCTTTG TATTTATGCAGCTTTCTGTCCACATTTGTAACCATCCTATCCAGTTTAAT GTCTCACATTAACACAGTATTGAGTAGCAATGGTATTTACATCTGCATCT AAATTTATCTTTTTGCACAGGCACAACTAACAGATGAAATTGCACAAACA ACGTGTGGCATAAACGAGCTCAAACTCAGACGGCAAGAGAAGGAGCGTTG TTTAGCTCAGGAGAGAGAAAATCTGAGGAAGTGTTCTGATAGGTATCCAG CTTGTCAACTACCATCTATATACACTATTCGTGACATGGCTACCTAATAA ACATTTCCTACAGGTTGAAGCAAATGGAAAGTAAGAACAATAAGCTACTC CAAGCATTGGAAAGAGCTGGTGCTGACAAAATCAGTGAGGCATACTACTG GGTGCAAAATAACAAAAATATGTTCAGGGGGGAAGTTTATGGGCCTGTTC TCCTTGAGGTTTGTTTTGTTGCGTGCCCACCAACTGCTGTTTGCTTTGCA TCCAAGAGGCTTATCATTATACTTTCTTCGACTGATCTCAGGTTAATATT CAGAACAAGACTCACGCTGCTTACTTGGAAAACCATGTTCCAAACTATGT ATGGAAGGTACTAATACTTTGATAATTTTTCATGTTCCGCTGCTAAATCC TGGTGGGTATACTAATTGTTTTCCTTAGTTTTAGCATTTTCATTGAGTTT ACTCCCTCCATTTTATAATATGTTTGGCTAGCATACCCTAGGAGGCATAA AGCTGAAGTAATATTTGATGGTACTGGATCATGCTTGCTCAAGTATGGTC CTGTCCCATCAAATATTATGTTGGTTCTGGGGGATTTTCTGGATGTGCTG GTCCCTTGGACCTCCACACCCTCTAATATATATAGCTGAACTTATGTACA CCTTTACTAGTACACCAGAATACTCTAGAATCTAGTAGGACACTAACTTA GACTCTACATTCACTGGAATGTTCCAGGCAGTCCTAGGACAGCACTACTA TACTAACACTTACTGGAATATTCCAGGCTCTCCTATGACAGTCTCCAACA CTCCCCCTCAAGATGGGTGATAGATATCTATCATTCCCATCTTGTTACAA GCTGAACTGCACTCTTTATTTCCTAATCCTTTAGTTAAACAATCTGCAAT TTGCTCGCTAGAGGTTACATGATTTATCATAATTATACCGTCATCCAACT TCTCCTTTATGAAGAAGCGATCAATCTCCACATGCTTGGTTCGATCATGT TGAACAGGGTTGTTTGCGATGTTGATCGCCGACTTGTTGTCACACCACAA ATTTAAAGGGCCTTTTCTCAACACTTTTAGTTCTGAAAGAAGATTTCTCA CCCATAACATCTCACTCAAACCTTGCGACATAGCTCTATATTCAGCTTCA GTTGTTGATTTAGAAACCACCGGCTGCTTCTTACTTCGCCATGACACTAA ATTTCCCCCGACAAATACACAATAACCAGATGTGGATCTCCTATCATCCA AGCAACTTGCCCAGTCAGCATCACAATACCCATCCACATTTAGATGACCA TTCCTTTTGAACAATAGTCCCTTTCCTGGACTACCCTTCAAATACCGGAG GATTTGATTGACCGCATCCAAGTGTCCGCTCCTAGGATCATGCATGTATC TGCTCACTACACTCACTGCATATGAAATATTAGGTCTTGTGTGACATAGA TAGATGAGCCTTCCAACAAGCTTTTGGTACTTCTCCTTATCCACTGGTTC TCCAGATTCGGCACATAATTTGTGGTTTTGATCGATAGGTGTTGATGCAA CCCGACACCCAAGCATGCCTGTGTCACTAAGCAAGTCCAATACGTACTTT CGCTGGGGGAGAACAATCCCTTTGGGAGATCTAGCAATTTCTATGCCAAG AAAGTTCTTGAGTTGGCCAAGGTCCTTCACCTCAAATTCTTTGCGTAGGA TGTCTTTCAACCGTGATATCTCCACCTCATCATCTCCGGTGATTATGATA TCATCAACATATACGGCAAGGATTGTAATCTGGCTATTTGAGTGCCGATA GAACACCGTATGATCCCCATTACACTGCTTATATCCCATACCGCATACAA CTCGTCTAAATCTATCAAACCATGCCCGCGGAGATTTCTTGAGGCCGTAT AGAGATTTTCTCAACCTGCATACCTTCTTCCCTGATGTTCTAGGAGTGGA GAAACCAGGTGGGATCTCCATGTATACCTCCTCATGTAAATCTCCATGCA AGAATGCATTCTTGACATCCAACTGATGCAAAGGCCACCCGAAGTTAGCT GCACATGAGATTAGGATCCTCACCGTGTTCATCTTTGCCACCGGCGCAAA TGTCTCATCATAGTCAATCCCATATATTTGACTATATCCTCTCGCAACTA GTCTTGCCTTGTACCTTTCAATTTTCCCTTCTGGATTCTGTTTCACGGTG TAGATCCATTTACACCCAACAACTCTCTTTCCTGCTGGAAGATGTACAAG TTCCCAAGTTTTATTCCTTTCGAGAGCATTTAACTCCTCTATCATGGCCT CACGCCACTTCGGGTCTTGCTTTGCCACTCTCCAGTCTCTTGGAATCACC ACAGATTGCAATGATGCGATGAAGGCCATGTAGTTCATAGATAGGGATGT ATATGATACATAATTAGCTATGTCATGCTCCTCCCGGTACCAATTTGGAG GTTTTCTAGCTCCAGCTCGGGTTCCTTTTCTTAAGGCAATGGGTAGATCC AATGAATCATCGGTGACACATGGCACACTCTCAGATGAGTCAACTTCATC GACCCCTGGAATTTGTTGTTGATGTTGCTCCCCCTGCAGCTGGATCTCAC AATTTGTTTGACCCTGTTGTTGATGCGGTTGCCTCCTCGTATACACCCTT AAATTTTCTTCCTCATTTGGTTTTCTCCATCTCTCTTTATCCATAGGTTG TCTTCTTGTATACACCCTCAAATTTTGTTCCTCATTTGGCTTTATCCATC TCTCTTCACTCATAGGACATGGAATTGAATCAAGCACAAATCTCGATGGT TCATCTTCCCTTGTCCTGAGTGGTTCACTCTCCCCCTCTCGACTAGCATT ACTTGTGCTAGGAGAGTCAAAGTCAAATAATGAGTTGAGATCCGTCTTCT CTCCATAGAACGGCTCAGACTCTCTGAATGTCATATCCATGCTCACAAAT GTTCTCCGCTCACTAGGACTCCAACACTTGTAGCCCTTTTGTCCAGATGG GTATCCAATGAAGATGCACTTCACAACACGTGGATCTAATTTTCCCACTG AAGGTCTGTGGTCCCTAACAAAGCATGTACATCCAAATACCTTTGGAGGA ACAATGAACTCATTTTTCCCATAGATCATTTCATACGGAGTCTTCATCCC AAGAACTTTTGATGGCATCCGATTAATTAGATAAGTAGCAGTCATAACTG CTTCACTCCATAAGAATTTAGGCACATTCATAGTAAACATAAGTGATCGA GCTACCTCTAGCAGATGTCGATTCTTCCTCTCAGCTACTCCGTTTTGTGG AGAAGTATCAGGGCACGAAGTTTGATGAAGTACTCCCTTTTCTGATAGAA AATTGCCAAATTCATGGTTCACATACTCTGTCCCATTGTCAGTCCTGATA ATTTGAACACCAATGTTGAAACGATTTTGGATATATGCATAGAAGTCCCT GGAACATGCGAACACCTCACTTTTTTGTTTCATGAGATATATCCAAGTCA TCCGAGAGTAACAATCAATGAATGTGACAAAATACTTCATTCCACTAACA GAGACCACAGGAGACGTCCAGACATCAGAGTGAATCAGCACAAAGGGCGA TGTGCTCCGGAGTCCACGACTCACATATGATGTCCTTGTGTGTTTTCCAT ACTCACATGCATCACACACAAGTTTGTCTTTATCCACCTTCTTCATCTCT TCAGGAAATACCTTACTCATAGTATCAAAGGACATATGGCCCAATCGACA ATGTTGGAGTATCACCCTTGCCTCGTCATTACTTGCAACTGTCAGAGCGG TGCACAATGCTCCATCACTTTCTTGTCTATCTAAGTACCATAGTCCCTTA TGTCTCACTCTGATCCCAAGCCTCCTTCTGGTCTTCCTCTCCTCAATTAT GCAATTGTATCGATCAACGATGATTCGACAATCAATATCATCAACCAAGG AGCTCATAGACACCAAACTCACCGGAAATGATGGAGCATATAAGACCGAA GACAATGTAATTGACGGAGTGCATTTCACTGTGCCGACACCTTTGACAGG TTGATAAGTTCCATCAGCTGTTTGGATGGTCTCTTTATGCATGGGTGGAT GTGGAGCATATGATGCAAACTCACTCCACCTACCCGTGACATGTGTAGTT GCTCCCGAGTCTAGTATCCAATTTGAACGAGAAGTTTCATCTAACGTAGG AGCCTGATTTGAGATACCTTCTTCAATTTGTGCAAGATTGACAAAATTGC CAAGAACTGTTGTTTTCCCACTTTGATTGGCTCTTTCCGCACTTCTATTT GCTTTTCTCAATGTCTCCAGATCTTTGGTCGAGAATTCAAGCACCTCCCC TGATCCCTTGGCAGTCAAAATCAATGTGTCCTTGTCTTTTGCCTTGAACA GTTCAGCCAATTTATCGAGCAATTGCTCAATATCTCGATTCTCTCCCATT CTTGGAGCACTGCTATGCCCTCTTGTTCTCCCTTTATTATGTGTCTTGCT GCACGAACTCTGCTTCTCCTTAGCACGAACTCTTTTGGACTGCTTTGTGA GCCTCCAGTCCACTCCTTGCAAATGCTGCTAACTATCTACAGCTGCCCTG GCTCCTTCTCTCTTCCGTGTTGTAGCAGCAACTCTCCCTGCAACACCAAG TCAACCACGTCCAAGGGCAGGGTTTACTTCTCTGCACCAAGCCACCAAGC CGCGGATGGCTTCAATTGCGTCCTCCTCACTAATCCTCTGTTGTTTCCAA CTTGCTGCAGCGCCGCTAGTTCTCCTCGCCACACGCGCACTGCTGGCCAC CGGTCTAGCCTTTTCCTCTTCCTAGAGTCACCACTGAGCCTCACCTACAG CTCGCCCCCCTGCTCCACCGCCGTGTCTCCAGCAGGTCACCTCCACACAC ACGAGCTCCAGCACTTGGTGATTCACTGTCGGACACCTCCAGGAACCAGC AGCACCTCCACCTTGTGCTCTGATACCATGTTGGTTCTGGGGGGAATTTT CTGGATGTGCTGGTCCCTTGGACCTCCACACCCTCTAATATATATAGCTG AACTTATGTACACCTTTACTAGTACACCAGAATACTCTAGAATCTAGTAG GACACTAACTTAGACTCTACATTCACTGGAATGTTCCAGGCAGTCCTAGG ACAGCACTACTATACTAACACTTACTGGAATATTCCAGGCTCTCCTATGA CAGTCTCCAACATATTACTTAATTTTTTTGCCTCCTGATGCAACAAATTT GGTCCATCGACATGTGTTAGCTGTAGGAAGTATGGTTACGAAAGTGACTT CGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTACGTTAGCGGACTTACAG GTCGGGCCGGGGCTCCATGCTCTTTCTTTCTGCGTGGGACAGGTAGGCAT CCTGGGTGATATTGCGAAATGGAGGTGGTATAAAGCAAGGAGCCTCTGCT CGAACCTGTGCAGGTCTACCAGTGGCCGCAGGTCTCTGTGGGCGTGCTAT TGCACATTGTGCCCATGTCTTGTGCACGATTAATGTGCAGAGCAGACTGA TCGTCCAGTTACTGAAGATGATTAGTGTCTAATAGGACAACATCTCCAGA AACTGTTTTCTAGATCTAAGTTCCTTCGCTTACTGTCTTTCTTTTGCGAA AACATTATATCTGCAAACAAATTAACTGCCATTTCACTGCATGTGCCAGT CATTCATTACCCAGGATTCTTCCGACCGTGACCTCTTGGTTAGACAACTG AAGCAATATGGTATTCCTGTTCTGAACTACACAGGGAGCAATAGCATCAG GTGTCAGCCATTCAACATTACTCTGGAGGTCAGCACATATATACCAGACA AATTAGCATTTTAGTACATCAATATCTATTACTTATTGTTACTCCCCCCT TTGTTTCACGAGCGCCATTTTGTTTCGAAATCCTGTCCCTTAGTATAACA TATCGAAGCAAATTGAACGCTAGTCTCTCTTTCATGCTTGTTCAAACCTC TTCTTTAATTGTTTGTGCATGAACAATTCACTTCCATCTACATAAATCAT CATGTCTGTCTTAGCTACACACTTAATGTGAGGACATTATGTGATCCTCT TTGACTTTATCAACTTGGATCTTTCTTTATCTTTGTGCCCAATCAAAATG CTCGAGGGTAAAAATAAAATGACGGAATAAATTCTGAGTATGTTAATTGT TCTTTTGACAGATGAAGCAACTTGGGATCAAATCACGACTTGATCAAGAA TTTGAAGCTCCTCCTGCTGTAAAAAATGTTTTGATTACTCAGGCTTCTGT GGATCAATCGGTACAACACTGCTTATATCCAATTCATGAATCTGTACCAA GTTGCATGTTTATGACTTCAAAGAGTTCTGCTTCTTCTTCATGCCCATGA AGTATATAGGTACAGATCAAGCAGATGAAAGAGCAGACGAAGTGATAAAG TTAGGTATTTCTGACCTTTGGACTCCTCGTAACCATTATCGATGGTCTAG ATCGAGATATGGTGATCATGTGTCAGCAAATGTTGATTCAGTCTATCCAT CTCGTCTCTTCATGTGCGGTATGTGTTGCAATCTCCGCCTTAATAAGTTA GTGGATTGTATGGTTTACCCATGATTCTTATCAGTTTTTTCTTGCAGACT TGAATATCAGTGACATTGAAATGCTTCGATCTGAAAACGATGAACTTAAG AAAAAGGTTGAAGGCATGGAGGAAGCCTTACGAGAGATCCAGAAAGACCA GAGGAAATTAGAAGATGAAGAGGCAGAAATCCGCAAGAAAAAGGTTTCAT ATATTCTTAATGCTATTAACTTCATTATATTCAACTAAGCTCAGTTGTTT CTGATAATGCTTATCTTTTGATTGTCATATTTTTAGGAGACAATTATTGA CAGGGTGAGGTCCCATAAGAAGAGGAGGGAAGAAATACAAAGGCGTATAG GTACGTTACTTTTTCCCTGTTCTTCTACATGTAGCTTACATAATATGCTG TTCTTCTCTCTAGATATCAAAAGAAGAATTCTGGAGGACATATCTCAAGA GGAAGACGTGGAATCCAGCACAAGAAAGCTTACTGATCAGCTAGCTAAGT TCAATGATCAACGATTTCGAGCTATGATAAAACTCAAGGCTAGTACTTCT TAAGCTAACCACCAATATTTCGTTTATCATGATCATCATCAAGGCTACAT ATTCTTACTTCATATTGTTTTTTATCTCTTAGAGTTTACTTGTTGAAGCT GTTGCTCTCAAATGGAGTTCTGCTGAAAAGAACATGGCTTTTATTGAGCT TGATACAAAGGTATGCTTCTTGAGAAAGCAGTCACAGTGCACACATTTGT GAACAGTGCACAAACCAGAAAAAACTAACATAAGAAAATGGTGAGCTCAT CCAATTATAAATGCTTATGGTTTGTGTTGTTCCATGCCTCTAAACGTTTC ACTACATAAAATTATCTATCCTGGTATCATCACGAGAAAATTGTAGAAGT TTTTTATATCCAACATTCTGTATGTTTTCTCTTTAATCGTCATTTGCATC TCATAGATATGGGAGATGGAAAAGGATGTGAAGAAATTTGAAAAGGATGC TGTTCATGCTGCCAAAGAATATGAAAACTGTGAGTTGGTGCTACCAACTG CATTGCTGTTTTTAGCGAGTATATATATTGAAGTTGGTAGGCGTCTAAGC TATTCTTTCTTATGTTCCCTTTTTGCATCGAGATTTTGCCTTGATATGAA CTATCTTTGGTCTTTGGGTGTACATTTTTTGTTGACAGATTATATCCATT TTTTTGTAAGGCCGTGACACGGAATTACCAGCGAAGTATTTTTTTCAGTA TGATTTTTATGTGGTACTCCCTCCATTTAATAATATAAGATGTTTTAGCT TTGTGAAGATAATGTATCTAGACACTTTTTAGTGTGTAGGTTCGAAAAGG TTCACTCCGAATCTACACACTAAAAGGTGTCTAGATACATTACCTTCACA AACGTAAAACATCTTATATTTTGAAACGGAGGGAGTACTACACACTAGTA TGTTGTTGCTGCACTGGTTGACGATCCAAATCTTGATTCTACTGCTATCA ATATATGTCTATATGATCATGGACCGCAAACATGCTTTTTACATATTGGG TGAATTGGCGGGTCATTCTTTACAATAGGAATGTCGAAGATTGTTTCTTG TGGCATCACATGACAACGTCGTGGGTCCAGCCTGCTGACAGGAAGCCTGC CCTGGAGCACCAAAGTTAAATATGAAGACTTCATTATCTATCTGGTCAAT TGGTTGAAAATATGAACCTCTTAGAGAATATTTGTGATTTTCTTTCCAAG TTTGTGGAATTCCTTGTTAGCTAAGACGCCTCTATAAGCCAGGCCTTTTG TCATTATTAATCAAAGCATAAGCAGTTCCTTCGTCAACTTTACTACTTTG TAGTATCTGTCGCCAACTCGCCATGCTGGATGGCTGCCTGCAGTGTTGAC CTAAGATCAAACTTCACCACAGCTCTAATCTCAGAAAGTTGGGTTCTAAC AGAAAGATACTTGATAACTTGGTTCTCCCAAACCAAATATTGTAACTTGC AAGACAGTCCTGGAAATCCAGCATTGTATGATCTATGAAATAATGCTTGG AATTTCTCACTCGGAGCTTCACTGAGAAGTTATACGTGCTTGCATTGTTG AATAGTTGTTCCTTAAAGATAAAAATGTTTGATGCCATGGGGATTCTTGT TAGTTTGAACAGATCTATCTGATGATAGTAGTATTAATAAATAAGTAGCA GCAGTTATTCATCTTTTATAGAATTTTTTATATTATATATATTTTGTGTG ACAGTTTGAGTATATGTTGGCCTTCAAGCAGTCAATATTTTATTTCGATA CTCACTGACATTGATTGACGAATAGTTTACCATATGGTGTCTTATTCTTT TCGTAATAGGTTCTTTTAATTTTCTCATCAGGTAAAAGAATCACTCAAGA GCATAGACAGCTGCTGCTCAAGGCAAAACAGCATGCAGAGTCAATATCTA TGATCACCGAAGACCTTGCAAAAGAGTTTGAGAAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.