Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA006713

[Submit comment/correction]

Sequence	AA006713
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA006713
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGCTATCACACGATCTCCAACTGATCGTATTCCCGGCCTCCGCGATCTC CAACAGATTGTATTCCCGGCCCCCGCGATCGTATAGACGGCGGCGCCGGC CGGCCGGCACACTGGCGGCACAGCACGGCAATTGACAACGCTAGGCAAAT TGGAAACATCAGCGAACAACACGACAGCCAGGTTTGTTTCCATTCTTTTC CCCTCTTTTAAGTCTTGGTTTTTTAGATTTACTAGAATTGATATTGTAAA TTCCAGATTTGGTATATTTCCTAGTTGACTAATTTCCTCGACCTTTTTTG CTTTCTTGTAATATAGATGATGAAGAAGAAAAGTGACGTTGGCGGCAGTA GCATATTTTCATTGTGGGAAAAAGCATCAAAATCCAAAAGGACAAATGAA ACAGCTACACCGAATCAAACAATTGTTGAAGCAAGTAGTTCTCATGATCA GCCAGAGAACAATTTGCAGTTGGCACTAGTGTCACCGTCAGATGAAGAAC GTGAACCGGAGAGCAGCCGTGCAATCCCAAATCCAATTGTAGAAGATGAA GAAACTGTCGATGAAGAGGATGAAGAAACACAAGAAGATTTGGGGGCACT CGAACATGATCCAGAGAAGCGGATTCCCATCTCAAGGTATGATGCCAACG ACAAAGATAGAGTAAGAAGGAGATACATTGAGATGGGGCCATGTTAACCA AAGAATCATAAATTTCCAATTACAAGTATAAGTGGAAAAGACCGTCGCTT TTGCATGTTTTGGTTTAAAGAATATCCATGGGTTGAGTACAGTGTGGACA AAGATGCTGCTTTCTGCTTTGTTTGCTATTTGTTCAAAGATAAAACAAAA TGTCCTGGTGGAGATTCATTTGTGAAGAAAGGGTTTAGGAACTGGCACAT GAAATCGAGATTGACAAGACATGAAGGTGGTCTTAGTAGTTCTCATGCTG AAGCTCAAGAGAAGTATGATATGTTCACTACACCATGTGCATTGATTCGG GAGTCTCTTGCTTTAAACACTTCACAGTACAAGGCTTTGTATAAGCAGCG TTTGACATGGACACTCAAGTGTTTGAGGTTTCTATTACACCAAGGCTTGG CATTTAGAGGACATGATGAAAGTGAAGACTCACTAAATAAAGGAAATTTC CTCGAGCTCTTAAATTGGCTAGCAGGAAATTTTGAAGAGGTTGACAAGGT AGTTCTCAAAAATTCTCCAAAGAACTGTAGGATGACTCACCATGATATAC AACATGAGCTCATAAAATGTTGTGCGCAGTTGACTACTAAACTAGTCATT GAAGAACTTGATGGTGGCCATTTTGCAATACTTGCAGATGAGTCTAGTGA TGTGTATCAGAATGAACAATTGGCTGTTTGCTTGCGTTATGTTGATAAGA AAGGAAGGGTTGTAGTAAGGTTTCTTGGTCTTGCTCATGTTGAAGATACT ACCTCTTTGACACTTAAAGCTGCAATTGAACAAATGCTAATGAATTTCAA TTTGACATTTGCGATGGCTCGTGGGCAATGGTATGATGGAGCTAGTAACA TGAAAGGTAATGCCAATGGACTGAAAAAACTTATTATGGATGAGTTTCCT TCTTCCTTGTTAGGGGTGACCCCTTGGGGTGGCCCGATCTTTCACGAATT CCGGGGAAATCGAGGGGAAAGCGGTGGACGGGGAGAGGGGGATGAAATCC ACGAACACACACGCGAAGAACTCGATGAACTCACACACACAAAAACACGA TACAAACCAATAACTCATGCCGGTGGCAACCGGTCCAACATAATCCCTAG GATCGGTGTTGGGCGAAGCTCTCTCTCCACGTCCAACAACGGGGGAGAAA TGCTTGGTGAGATCTTGACTACTTGGGCACGAGACACCGAGATCCCAAGG ACTTGTACAACTTGAACGCACTAGTCAAGATCCAAGAGGTTGTGGATAAT TTGGTGCCCCTTGGTAAGGAGCATGAGACAAATAGTTGATAGATCCTCAA AGGGGTGTCCTCAACTATTATTATCCAAGTCTGGGGTTTACAATAGAGGG TGGGGGATATTTATAGGCCAGCCACAAACACAGGGGTAGTTTAGGAACGA GATGGGAAAATATAGAGAGGGGTACAGGGCGCTGGGCGGAGTTGACGCGA ACAGGTTCAGGCTCGCCCGGTAGTACCGGCTGGCGACCGGTAGTACCGGC CTCAACCGGTAGTACCGCTCAAGGTCTGGTAGTACCGCTTGCAGTCCTGG GGCTTCGGTTGGCGACGTCAGTAGTGAGCGGTAGCAGGGGCGGTAGTACC GTTGACCGGTAGTACCGGTCCTAGCTCCGGTAGTACCGCTGGCGTCTGGG GCGTGGAGGGGCTCCTCCTGGAGCGTCCGGTAGCAGGGTCCGGTAGTACC GCATGCACCGGTAGTACCGGTCGCTTGATCCGGTAGTACCACTGGCGTCT GAGTGCGGTTGGTCCCTTTCGCTGTGGTTCCTCCGTTCCATGGGTCCTTC TCTTCGTACATGATGATGCACAGGGTATGCGTATGAAGTAGCAAGCCATC CAAGGGTGTATCGAAGTCACACAAGGAAAGGAGCGAGTTGACCTTAGCTT GTAGGAGTTTGGCTCGGGCGCGAGTCATGGGTCCACTTGGGGAGCTCGTA GGAGTAGATGTAGTAGCGTTCGTAGGACGGGCTGCATCAGCTCCCCCCCC CTTGGAAAAGAGTCGTCCTCGACTCTTCAACCTCCTCAACATCATCATCT CCATGGAAGGGTGAAAGATCCTTAACATTGAACGTTGGGCTCACAAGGTA CTTCGATGTTGGGATATCGATGATGTAGGCATTGTTGTTGATCCTCTTGA GTACTTTGAACGGACCATCACCTCTTGGCTTGAGTTTGGAGTCGCGATCC TTGGGGAAGCGGTCTTTACTCAAGTGTATCCACACAAGGTCGCCTTCTTC GAAGATCATCTCTTTCTTGTTTTTGTTTAGCCGTGATGCTTGGCGAAGGA CTTGTTGCTCGATCGTAGCTCTTGTGTCTTCATGTAACCTTTTCATTGCT TGGGCACGCTTGTCAACGTCCATGTTGGTGCGGTCGTGTAGTGGAAGAGG TAATATGTCGAGCGCGGTGAGAGGTTCGAACCCATAGACGATCATGAACG GGCTCCTCATGGTGGTGGAGTGTTTTGCGTGGTTGTAGGCGAACTCAGCG TGTGGGATGCATTCCTCCCAATCTTTAAGATTCTTCATTATCAATACGCG GAGAAGTGTGCCAAGGCTTCGGTTGACGACCTCGGTTTGTCCATCAGTTT GAGGATGCGAGGCGGACGAGAATAGGAGCTTGATGCCGAGCTTGGCCATG AGGGTCTTCCAAAAGTAGCTCATGAATTTGACGTCGCGGTCAGAGACGAT TGTTCTTGGTACACCGTGTAGCCGAATTATTTCCCTAAAAAACAAATTTG CTACATGTGAAGCATCATCGGTCTTATGGCACGGAATGAAGTGCGCCATT TTGGAAAAGCGATCCACCACCACAAATATAGAATCATGTCCACGCTTGGA TCTAGGAAATCCTAACACAAAGTCCATGCTAATGTCCGACCAAGGTGCAT GAGGGATAGGTAGTGGCATATAAAGACCAAAGGGGTTGTACTTGGACTTA GCTTGGATACATGTAGTGCACCGTTGGACGTGGCGTTCTATGTCGCGCTT CATCTTTGGCCAAAAGTAGTGAGTGGATAGCATGTCATATGTCTTGTCAC GGCCAAAGTGACCCATAAGGCCTCCACCATGGGACTCTTGAAGAAGCAAA ATTTGGAGAGACGACTTCGGAATGCAAAGCTTGTTTTGTTTGAAAAGAAA ACCCTTATGCAAATAGAAATCATCAATCCCTTTGTCTATTAAACACTTTG CAAAATTTGATCCAAAGAATGGGTCGGACTCGTACAAAGATTTGATGCCA TCAAGACCCAAGACATTTACTTCGAGACGCGTAAGAAGGTTTGTGTTTTT GCGAGACAAGGTGTCCGCTACCACATTTTCTTTGCCCTTCTTGTACTTGA CAATGTAAGGAAAGGATTCCATGAACTCAACCCATTTGGCATGCCTTTTA CTCAAATTTGCTTGGCCCTTAAGATATTTCAATGAATCATGGTCGGAATG GATGATAAATTCTTTGGGCCAAAGGTAGTGTTGCCACACTTGAAGGACAC GAACCAAGGCAAAAAGCTCTTTGTCATAAATTGGATAGTTAAGGCGTGCG CCGTCAAGTTTCTCACTATGGTATGCGATAGGGCGCCCATTTTGCATAAG GACGCCTCCAATGCCAATACCACTAGCGTCACATTCAATCTCAAAAGTTT TTGTGAAATCCGGTAAAGCGAGGAGTGGTGCTTCGGTGAGCCTCTTTTTG AGCTCATCAAATGAGTTTTGTTGTGCTTTGCCCCAAACAAAAGTGACATT TTTCTTGGTCAACTCGTTGAGAGGTCAATCAATGGTAGAAAATTCTTTCA CAAAGCGACGGTAGAAGCCGGCCAACCCATGAAAACTGCGGAGTTCACTA ACATTGGTAGGTATGGACCAATCTCTGATGTCCTTAACTTTAGAGACATC AACTTAAATGTCATTAGAAGACACAACAAAACCAAGAAAAATCAGTTTGT CTTTTTCAAAAGTGCACTTTGGGAGATTAGCATAGAGCTTTTCATGACGA AGGATTTGAAGGACCTCCTTAACATGAGTAACATGCTCCTCTAGTGACTT GCTATAAACAAGGATGTCATCAAAGTAAACCACTACACTCTTTCCAATGA GAGATCGCCAAATATGGTTCATGATGCGCATGAAGGTAGATGGGGCATTT GATAAGCCAAAAGGCATAACCAACCATTCATAGAGACCAAGCTTGGTCTT GAAGGCGGTTTTCCACTCATCACCTTCGGCCATGCGAATTTGATGGTAAC CACTACGAAGATCAATTTTCGAAAATATAGTGGCTCCACATAGCTCATCA AGCATGCCATCAAAGTGTGGTATAGGATGTCGATAACGCACGGTGATAGC ATTGATTGGAGGGCAGTCCATGCATAACCGCAACGTATCATCCGTTTTTG GCACGAGAATCATGGGTACCGCGCTTGGACTAGTGCTTACTTGGATCAAA CCTTTGGAGACGAGTTGGTTGATTTGTCGTTCTATCTCCTTCGTCTCTTA CGGGTTTGTGCGATACGCGGCGCGGTTTGGGAGTGGAGCGTCGGGTATGA GGTCGATGCGGTGCTCGATTCCGCGAAGAGGGGGTAGTCCATGAGGGAGC TCTTCGGGAAATACATCTTGGAATTCCTGCAAAATAGCCATCAAAGAAGG AGGAACATTTGTCAAGTCATTAGTTCCTTGCGCTAGTCCCTTGCATACAA GGACATAGTGCAAGATGGATGGGTTGTTCCGCACTTCTCTCATCTCACTT TTGGTGGCAAGAAGAACACTCTTAGTTTTTCCGCTCGAGTTTGGCTTGTG GCTCTCACTTACTATAGTGTGGTTCTCTCGCTCACCGCTCTTCTCACAAG CTGGTTGTGTGTATTGCGCCCTCGCTAAAGCCTTTGCATTGTCCGCAATT ATTTGGCTAGGAGTCATTGGTTGCAACACACAAGTCTTCTCAAGCCATTT GAAGGTATAAGTGTTTGTGTGACCATCATGCAAAGCACGCTTGTCATATT GCCAAGGCCTTCCGAGCAACATATGGCAAACCTTCATGGGGACCACGTCA CATTCCACCGTGTCTTTGTATGGTCCAATTGAGAATGTTACCGAGGCGGT GTGCTTGATCGTGACGGACCCTTGGTCACTTAGCCATTGTATATGGTAGG GATGCTTATGCGGATGGAGGGTGAGGTTGAGTTTCTCACACAATTCCGTG CTTGCAAGATTGTGGCAACTCCCTCCATCGATGATAACCTTGATGGACTT CCCATTGATACCGGCACGAGTTTGGAAGATGTTTGATCGTTGGTCTTCAA TCTCATTGACTTGAGTAGTCAAGACCCTTGTGACGACAAGCGATGGACTT GCGTCATGCTCACACACAAGTAGTTCTTGGTCATCTTCCAAATGTTGCCT TGCCATTGCTTCCTTGACCCTTGCATCAAACTCATCTTCACTCAAGTATT CTTCATCGCCATTGTCATGGATGAACAAAACTTTCTTGTTCCCACATGTG GCCGACTTGTTTCCTTTGCCTCCACACTTGTAGCACTCACCATTGAATGG TTGTTCATCCTTTGCGTATTTTCCACTTGGTGGCGGTTTTCCTTGAGGAA GTGTTGGCTTGAAGGGAAGCTTGGTGGTACTTGATGAGCTTCCACTTGGT GTTGTTGGAGTAGTGGTTGACGCTTGCTTGTATGTGAAGTACGTCTTTTG CTTGTTGTACTTCATGTCCTCTTGCACTTGACGCTCGGCCTTTGATGCTA TGTGCACAAGCTCAACCATGTTGTTGTACTTTTGGAACTCGGTGATGCGC TTGATGGGATGGTTCAAGCCATTGAGGAAACATGCCATTGTTTGCTCATC ACGCTCTTCAATGTTGGCACAGATCATGTTGAGATCCATTTGCTTAAAGT ACTCTTCCACGGTGTTTTTCCCTTGACTAAGCGTTTGAAGCTTTTTGAAA AGGTCACACGTGTAGTGCGAAGGAACAAAGCGGGATCTCATATGAGCCTT CATATCTTGCCAAGTTGAGATTGGAGGCTCTTCTTTTGCTTCACGATCAA GTTGGACTTGTTCCCACCAAAGTTTGGCGTACTCATCAAACTCGAGGGAT GCCATAGCCATCATATTCTCATTGCTATAGTTGTGCATGCGGAAGATCTT GTCAACCTTGAGTTCCCACGAGAGGTATTCTTCGGGTTCATTGGAACCGG TGAACTTGGGCATGGTGATTCAACAAGAGCAACCTCACGTGCATAACTAA GCCCATCGCCAACGACATGTTCCTTCAACAACAAGTGAAGCATCCGAAGT GGACGAACAAGATCGCCGTCCCACGTGAGGTCTTGCGGAGAGGTCACCAT CATAGCTTGATGTCGTGGCGTGTCGCAGAGACGGTACCGCTTGAGAAGAG CTCATGGATTGAAGGACGGGACCATCCCGGTGCCTTGAAGCGTGACGGCG AGGTGCGCTTGATTCACTTGAGGAGTGCCGAGATGATCTTGAGTCGCGCG ATCGTGGCCTTGCTATCCTATCAATGAGGCGTTGAAGCTTCTCATCCGTT GAGGCGAGGGCGTGACCAAGAGCTTCATTTTGATGGCCGAGGTTGTGTTG CATGGCATGCATTTGTCCTCGGACTTCTTCAAAGCGGTTGTCGATGTTCT TGAATTACACTCGGGCTTCGCTAAATTGTTCATCTTGGCGCCGCTCAAGG GCTTCACAACGGTAGTTGAATTCTCCTCGGACATTCCAATGATCCCATCT TGTCATGTATTGTGTGTCGTCCTCCGGAGGTGGTGGTGGTTGGGACGGCT CACCATTCTTGTCCATGATGCAAAGCCAACAAGGGTTGTATATGGAGAAG AATAATGCGGGGAGTTAGCCTTTTACCTCACCTTGGAGATTATATCAAAC TAATTGCCACACAAGAGAGCTAATAGCTTGCAAAGTGAAATCACAAAGAA ACTCACACACAAATAAGCTACAACTCTCTAAAGTTTTTGGTGGAAGGTTA GGATTGTGGGAACCAAACGAAACAATCCAAGCAAAAGGTTATTGTTCTAA GTGGTAAAGAACCAAAGATCAAAAGCAAGAGGATAAGATCTACAAAAACA CGGGAGAACACACACATGGAGATTAACGGGGTTAGCACGACTATGAAAAT GAGCACAAAAGGTCCTAACGAAGACTACGCTCGGATGTCGTGCCAACTCA AGGAGAGACCACAACTCGTTTGCCAAAAGAGGATAAGCAACGGATTTGTG CACTTGCCTTGGCGCTCTCTTTTCTCTCTCTTTTTTCTTACAAGCTTGAT ACTCTCTTTGTATTGGGAGACTATGTATCTTTATATTTTTCTTTTGCTCT TTTTTTTGATTCTTTTTCTCCCTTTCTATACTACTATGTTAACTTTTGTA TTTGCCCTCACACTCTCACTTTTCCAAGGGCAAGTGCACAATGCTTAGAC AAACACAAAATGATTTGCTCTCGTAGGATAGATACACACAAAGGAAGATA TGGGGTTGTCAAAGTGGCGCAAGTTATACCTTTGGTATTGTAGACGACTT GCAACCGTTGTTGTGGATGATGTTTGAGTGTCGCGGTGTCGTTGAGCGCG TGGTGAATTTATTGCGGAAGCTTTTGTTAGAATGGCGACAAACACGCGAA ACACGAATAAGCTAAAAAGGACAGTCAGCAAACGAAGTTGAGGTGCCAAA AAGAAAAAGAAAAACTGTTAGTTGCGGGCGGTAGTTCCGCCCGGTACGAC GGGTAGTACCTCTCGTACGTCCGGTAGTACTGCTTGGCGCGGAACTTGCA CACGATCAACCTGAAAACATCCTCAAATTCGTGGTAATCTGACCGAAAGG CTGGGCTAGGAACATAAAAAGGCTGTAGATCGACTCCAAAAGCAACAAAT CTATGGACCAAAACCACGAAAAACTCACCAAATCCAGAGATCGATCCGAA GGCAATTTGGGGCTCTCTTTTGGGGAATTTTCGATTTTATGGTGGATAGA AGAAAAATTGAGGGGAAATTCGTGATCAACCTTGCTCTTGATACCAATAT GTTAGGGGTGGCCCGATCTTTCAAGAATTCCGGGGAAATCGAGGGGAAAG CAGTGGACGAGGAGAGGGGATGAAATCCACGAATACACACGCGAAGAACT CGATGAACTCACACACACAAAAACATGATACAAACCAATAACTCACGCCG GTGCCAACCGGTCCAACATAATCCCTAGGATCGGTGTTGGGCGAAGCTCT CTCTCCATGGCCAACAACGGGGCGAGATGCTTGGTGAGATCTTGAATACT TGGGCACGAGACACCGAGATCCCAAGGACTTGTACAACTTGAACGCACTA GGCAAGATCCAAGAGGTTGTGGATAATTTGGTGCCCCTTGGTAAGGAGCA TGAGACAAATAGTTGATAGATCCTCAAAGGGGTGTCCTCAACTATTATTA TCCAAGTCTGGGGTTTACAATAGAGGGTGGGGGATATTTATAGGCCAGCC ACAAACACAGGGGTAGTTTAGGAACGAGATGGGAAAATATAGAGAGGGGT ACAGGGCGCTGGGCCGAGTTGACGCGAACAGGTTCAGGCTCGCCCGGTAG TACCGGCTGGCGACCGGTAGTACCGGCCTCAACCGGTAGTACCGCTCGGT CCGGTAGTACCGCTTGCAGTCCTGGGGCTTCGGTTGGCGACGTCAGTAGT GAGCGGTAGCAGGGGGCGGTAGTACCGCTGACCGGTAGTACCGGTCCCAG ATCCGGTAGTACCGCTGGCGTCTGGGGCGTGGAGGGGTTCCTCCTGGAGC GTCCGGTAGCAGGGTCCGGTAGTACCGCGTGCACCGGTAGTACCGGTTGC CTGATCCGGTAGTACCGCTGGCATCTGAGTGCGGTTGGTCCCTTTCGCTG TGGTTCCTCCGTTCCATGGGTCCTTCTCTTCGTACCTGATGATGCACAGG GTATGCGTATGAAGTAGCAAGCCATCCAAGGGTGTATCAAAGTCACACAA GGAAAGGAGCGAGTTGACCTTAGCTTGTAGGAGTTTGGCTCGGGCGCGAG TCATGGGTCCACTTGGGGAGCTCGTAGGAGTAGATGTAGTAGCGTTCGTA GGACGGGCTGCATCATGCCTATTATGTTCACTGTTTTTCCCATCAACTAC AATTAACTCTTGTTGCGGTTGCTAAGGAGAGTGATGATTGCACTTGGTTC TTTCAGCAACTTGCATACTTGTTAAATGCTCTTGGCATGTCTTGTAAAAA AATCAGAATGCTTCAGATAGCTCAGGCCGAGGAACTGATTTATGCATTGG AATTGGAAGAAGTAGTAACGGGGAGTGGGCTCAATCAGGAAATGAGTTGG CAAGGCCATGTGATACATGTTGGAGCTCTCATTTCAGAACTATGAACTGT GTCATCTCTATGTATGGTGCAATACGGCGAGTTCTCACCAAGATTGGAAA AGAGTACCATGGTGTGGAGGCACATGCGGCGCTAACAATTTTGACATCAT TTCGGTCATTTGAGTTTGTTTTCATGGCACACTTGATGCAAGAAATATTT GGATTCATAAATGATTTGGGCAGAGCTTTGGAAGCAAAAGAATTGGATAT TGTTCATGCTATTCAGGTTCTTGATGACACAAAGTATTTCTTACAGGGCT TGAGGGATGATTCTGGCTGGGAGGATTTTCTTATGAAGGTCACATCTTTC TGCACAAAGCATAAGATCAAAGTTGTTGATATGGAGGGTCCTTACTTTCC TGTTGGGTGACCTAAAAGGGGTTTCTTTAAAGGTGCGATGAATTTCCATC GCTTCCATGTTGATATGTATGTGAGTGTCATTGATAGGCAAATTTCTGAG TTGAATAGCAGATTTGATGAGGTAAACTCAGATCTACTTACTTGCATGGC AGCATTTAGTCCACTTCGCTTATTTGCTTCTTATGATCGAGAGAAGTTGT TTAGGCTTGCTACAAAGTTTTATGCTAATGATTTCACAACTGACGATCTT GCAAGACTTCCATGGCAATTAGACATGTATATTGCTCATGTGCGTAAAGA TGAAAGGTTCAAAAGCTTGAAGAACATATGTGATCTTTCAGTTATGCTTT TCGAGACAAACAGGCATGAAAAATATTTTATTGTTTACAAGCTTTTGAAG TTGGTACTGATTCTACCAGTAGCTACTGCTAGTGTTGAAAGGGTTTTCTC CTCAATAAACTATGTGAAGAATAAGCAAAGGAATAAAATGGGTGATGACT ATTTGAACAATTGTATGGTTACATTTGTTGAGAGAGAATTCTTCAACCAA GTAAAGGATGAGGATGTCATCAATCTCTTCCAACAAGGTAATCGCAGAGT TACAATGTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.