Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA004190

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Sequence	AA004190
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA004190
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GGTAAGACGGTTCTTTGGCCAAGTCTCCAACCCCACGTCCCCTCTTGCTC CTATTCCAATCCCATCTCGCCGCCAACGCCCAATCCCGTGCCTCCGCCTT CTCCTTCACCCAGTCGGTCGCCCGCCGCACCGGCCAACTCCTCGACCAAT TAGCCCTTGCCCTGACGCACTTGGTAGAACCGTTGCGCTAGGGTTTCTAA CCCTCAATGGCGGTGGGCGTTCTTCGGGTCAGACCACCGAATGGCCATGA TGGCCGCAATATGCTCCACCCAAGTCTATCCATGGCCCGTGTTCGTTGTT CACGGCTGCCGGTAGAGATCCGGTCCTCCCCCTCCGCCCCTCTTCATCTC GCACGGCAGCAAAGGAGGGACGTGGTGGGATCTCCATTGGTTAGTCCCCA ATCCTGCTTCCTCTCTCACGGCATCAGCAAGAAAGCCACAACAGAGGGCA ATTCTTCCTAGCCCGGGGACCAGGCGACCGTGCCATGGGGTGGCACGGAC ACGCCGCATATGGTTACACAAATTTTGGATCGTTTACTTACCTTCTCTGA ATCCACAATTTGTTTCTCCTCTGTTTTTCAATTTCTTACAATCCGAATCC TTTCAAGTGTAGTTGTTTAATTAGCTGACACAATATCAATCTTAAGTTGT AGCACTGCTTATATGTGATATCTTAGAATGCAACAATGGTCTCTGTCCAA CAAAACTTAGTGAGTCATGATAACAGACCTACAATCATGATGATTGCCAT TGTGTATCACAGCTCCTCGCTTGGTTGAGGATTGAGATGGCGGCCGCCGG CCAGTGTGCCAGCCGCATCGAGGCCGTGACACACCTTGAAGTTCAGTAAT AGTGAGGTGCGGAGGGAAGGTCTGTACACGATTGAGTGCCAGGACCCATG AGCTCTCCCTGACGAAGGCCAGAACTAACTGCGACCTTCTGTTGAATCTG TTCTCGCCTCTGAGCGGGTTGTCCTCCACTGTCTCCATGTCTCGAGACTG TCATGGACGTCTCCAGAACCAAGGCAACCAAGTCTTCACCTGGAATAGTC ACAGGAATCTGAGTCTGCCGGAATCTGAGTCTGGTTGCTGCCGGCCACCA TAGGTGCCTAATCCTTATGGCCACAATTCAATAGTTTGCCTGTTAACTGT ACGTAATACAGCATGTGATGGTACATCACCCTTATCTCAGGTTCTTGAAA CAGTTTTTATATAAGAAAGTTGGACATAGATGTAGGTTCGGTTTTTTATT CATTATATTGAATAATATCAACTAGCGCTGAAGCTTATTTTTGATTTCCA ACTGAAATATGAGTGAAAACACTTGTGAAATCTTCCTTTTAATATGACCC TGTGGTTCAATAGTTCAACGTGAGTTTATTAAAGGATCCTCTCTTTACTA ACCAAAAGAATAAAAGAAGCGATGCATGGTGACTTATGATATGATAAGTT GATAGTCGATGTTCTCTTCCAGTATTTTATCATTCTTTAATGAAATTCCT GCAATAGCCCATTCTTGAGATTAGATTTCTTCCTGTAAATTAATACACTA GATAGTTCGTATTTCTGAATTATGCCTAATTTAGCTCCATTAAGTAGTCT CCCTTAGTGTGGTTACTTTATTAGCTGGAATCACTTTTTTTTAGAAGAAG CTGGAATCACTTAATACTTTTAATGTTACAGAGTGGCCAAATGAGGCAAG CAGGTTTGCCTGATGTTTACAGTAAAACGTTAACCTAACCAAAATGTTTT TATTCTCATCTTTCTTTGTGGCCCTACCTATCTAATTTCTATATATGAGA TCAGCCCACCAAGGATACAAGAAAAGTAACAACAAAGTGTAGAAAGACTT AATCATCTAGACCAACATCTATTGTTCCTTCCCTTTTCTTGGACTAGAGT AGTTTACATGAACAATTCTCGCATATTTGTGACGTCGTTGATATTTGATA TGTTCCAATGGCCACTATAATCTATATAGGCTGATCTTCATAGCTTTGAT GAATACACATGTCTTATGTAGCGTGAATTGTGCTTTAACCATGTGGAACC AGTTGGATTAGCCTTTTGCCTAGAATCTGCTGCAAACGAATTATGTACTC TTAGTTTTAGAGATGAACACCCAATATCCAGACTGAGATGTCCCTCCGAT GTTTGAGGATTATTCCATAGGTTGTTGCATGTAGATTCAAATATAGGTTT GAGCTTGAGTTACTTTGTAATTTCGATGCACAGTTGTTCAAACTATTGAT TTGTCAATTGCCAACTAGGTTGTACTTGCAACAATACATATATTAAGCAA CTATGCAATGTTTTTCAGAGGCAATAGTCACACATGAATGTCAACTATGT GTGCTTAAGTTACTAAGTGTTAGTCTTTAGTTTTTCATTGGTAAGGTGGA GCTACCACGATATATATATATGAGTGAGTTCAGCTGGGTAACCCACTGTA CATTAATTTTTTATTATCCTAAAGAAAAGGTGGACATATTCTTTTATTAG ATGTCAAGATTGGTATGGCTGGACAATTTGTGGTGATCAGTAAGATTTTA AATACTCCCTCCGACCCGTTTTATTGTTCGCGGTCGACTTTTTACAAAAC CGTCCAGGTTTTTTTCCCGACAAACCACCGAATCCCTCGCGTCGTGTCCA CATCCCCTTCTTCCTTCCCCTCATCTCCTTCGTCACCGGCGATGAGCTCT CGCAGGCTCGCTTCCCCCTCGTCTGCGCCGCGACCTCTCCCCCGCCGAGC CGTCCTCCCGCGCCGCAACTTCGTCCGCGCCCCTCCTGCAGTGGGTGGAT CCTCTGTCCGCAAACCCTATCTAGGGAGTAAAAATCAGTCCTTGCTATGG GGGGCGGACGCCGTCGAAGATTTGGAGCTCTCCGGTGAGGAAAATCGATG CGGCGGCGGCTGAATCGACTCCAACAAACTTAAATCGATGCGGCGGCGCC TGCAGCGGCGGTCCCCGTTGGTTGATGCGGGGACGCCTGCAGCGGCTGTC CCCGGTGGTTGATGCGGCGGCGCCTGCAGCCTCAATTGATGTCGCTCACC TCGTCTGCAAATCGCTTGCCGTGCAGGTGAGGATCACCTTCTCCCTCACT GATTTCTGATTATAATTTATAGCACGAAAAGTTGATGTGACCATGTAGTA GTTCAGCACCAGCACTGACTTCTTGTTCAGCGTTGGCTATAGCAGTTCAT GGCACAACCATCACCGTCATACCAGAGTGCTGATTTTGTGTTGCACTTAT TATTTGCACCATATCTTGTTTCTCCAAAGGAAAGCTTGCTAGAAGTAGTA AGCTATAATCAGATTCTTATGGCCTCCTGATGCAGTATCTAAGACGTCTG CATGGATCGCTTAAAGGATTGGTTTTTAAAAGAAAACAAATGTATCCTAT CAAGTTATTCCATGGGACGTTAAGAGTTGTTAACTAATGGGATTCTTATG ATCCGTTTACTACACTTGTACATACGATCGATTATTATTCTGAAGTTCTT CTTTTTCCAAAGCGGCATATACGCACTGAACATGGTTGCAGAGTACAAAG AAAGACATAATGCTCAGAGTATAACACTGAACAGTTAAGTACGGTTAGCC AAGACATTCTCTTCGGTCTGAAATTTCTACATAAGTATATGTAACCAATG GGGAGATCTGCTTACCCAAGCTGAAGGGCAGTTGGCTGCATCTTATGGGA GTAATGTTGCTGCTGCTGGATGATATTCAGGAAGTTCATCGGCTGCTGCC CCCTCTCATTATCAGTAACCTGCAGCCAAAGTGCCAAACCAACCACTCCG AGATTCACTGATCATAGCTCAAAAATATAGATGTTGACCAAATAGACAGT CTGTTCTGGTCGATCAACTAGCTAGCCACAGGTGATTAATGTACCTTGCT CCTCAGGTATATGTTGTCATTATGTACTCCCGCTAGATCCATTTCCTGCA ATTAGAGAATATTGTTGCTTGTTGTAATTAGATAACCCACTCACACTAAC TAAGACTTGATGTGAATTTCTGTAAACCACCCCCTTTGCTGTATTTTAGG GAAATCATCACCTTTGTGCTGCTGCTTGTGCTCTCTGCCATCTTATTTAG ACAAGATTGTACATATCATCTTATTTAGACAAGATGAAATCCTAGTTCAT ACTCAACCCCATTACATCCTTGCAATGGTAAAAATTAAATGACTGGTTTC TTCCTGGAGTATATGCATACTTAGTTCCTGGAGTTTATGCATAATTCTAT TGTTTCTGCCTGGAGTACTTAGTTCCTGGAGTAGCTTGTTATATCCTGCT AAATTGACTGAATTTTCTTGGAGCGTATACTGAATTTTCTTTGACTTGAT CATTCCAACCTTCATGTTGTAACTTGCTTCTCGCTAATTTTATATGAGTA AGTTATCAACATATGATAGTATACACAGGAATATATATTGTGTCAATTAC AACACAAGTAGACACACATAGTACACGATTACAAAACAAGTAGACACAAT TACAAAACCGAGCTTCTCCTTTTGACTAGCTTGAGCTTCTTTTTTAGTGA CCAACCGAGCTTCTCCTTTTGAGTAGCTTGAGATTCTTCTTTAGTGACCA ACTGAGCTTTTTAGTGACCAGCTTGAGATACATACATGCATGGCTGAGAT CTGTGAACATACATACATGGCTGAGATCTGTGAACATGTACTGTATATAG AATTCTACATTGGTAATATGTGAACATTCCTTGCATCCAAGTTTAATTAT CTATCCCAGCAACTGGAAAAGAACAAGGTATTTTGACAAGATATTCAGTT GCTAAAATATGATAGTACTGCTAGCAGGATGAGTGCCAAGGCATTTTTCT TTCATGGACTATTTCTGGCATTTTTCTTTCATGGACTACTCCTGGCTATT TGAAACTAGTGTAAAGTAATTTTAGTTATAAGTCTGATGCTATCTGAACC TGCTATCTGAAACTGAAATCTAGTTCTACTGGTTACTGTCTGAACCTGAA TATATATGCATGCCAATATGTCTGGTTGCTATAACATTCAATCAAAATAA TATGTCTAGTTGCTATGATATTCAATATGCCAATATGCCTTTTTCCTGTG GTACCAAGTTTAGCACATCCTCTTTGAACATGCCAAGTTTCTGTTGTTAA AAAATGTAGTTATAGCCTGCAAGATTACTACCCGCTGAACATGCTGGTTA CATCTTGGTTGAAACGATGTGCTAAGCAATCAGAAGTTGCATTAAATTCT GTGGACAATTGAGAATGGAGCTTATGCATAATGTTTTACAGGACATTGAT ACCTAATGGAGGTCGAAGAGGCTGTCAGGTCCGACGATGCCTGTCTAGAA GCTGGTGATCAGGCCTGGAACGGCCATGGAGCAGGCCGGCCGACAGTAAG GGAGCTCCACGGAGCTGCCGACGGAGAGGTCGACTACCAGGGAACTGCCG ACAAGAGAGCTCGAGGTGGAGGAGGGTGACGACAGGGAGGGCACTAGAGC TGGACCGGCCTCTGTCTCCCCTGAAGATGTCGGCCCTCCACCTCGCCCGA GGACGACGATGGTGAGCTGGAGCTCGACCGGTCTCCTCCCTTCGCGAGGA GTGGCAGTGGGATCGCGCCTACCAGGGATCGCGGCCGCCTCCCCTGGGGA TCGTGCCTGCCAGTGATCACGCGCCGCCGGAGATCACGAGCGCCGGAGAT CGCTGGGATCGTGGGTGCTGGGGATTGTGCCTGCTATCGCGGACACCAGG GATCGCGCGGCTGCCGGAGATCGCAGGCACCAGGGATCGCCCGGCCGCCG GAGATCGCGGGCGCACGCTGAGATTTTAAAATCTGAATCTTGAATATACG TCAATTTGTAACGTTTTAAAACAACCTGGGTTTATTTGTAAAATTGTGTT TATACATGGCGTGCGAACACTAATTCGGGCCGGAGTGAGTAGATAATTTC ACACAACATATTGTTTCCCTTTATACTGATTATCTTGCGAATCAGTGTAT CTTATACTCCTATTTCTGTTTCCACGCCAGATGTTGTGAAGTGGCCATGA TCAGCCTCCTAGACTTTACTGAGAATGCCATTTCCCATGAAGTGCAATGA CAGAATACTGAAAGCCCATGGATGGAGTTTTCTTCACCTATAACTAGCTG TGTTTGAAGCAATGTAGGTACTTCAGTGTGGAAATTAGCCATCACCCTGG ATGCCCTTTGCTTCTGACACATAGCATTTTGTATATATGTTGTTATGTAC ATTCTACATAGAAATATAGCACAACAGAGACCCTGAGAACCATTACAGTA GCAGTGCTCATTCCATGGTTTGTTTCTTCTGAAAGTTTATTATTCAGACC GTCTTCTAATTGTTGTATCCTACAAGGGAAATATATATACCTGGAGTCTG TGATAGATGTAGTAGGAAGTGTGATAAAAGAGCCAGAATATATATTCTTC CTAATAGTGGTAATATCCACTCATGATTTATGGATTCTACTTTCAGATCA TAAACCACTTTGAATGAAGAAACTTCATTTGTTGCGGAGAACCAAATTAC ACTGTGACACCCATGAGCGAATTCTTCACACCCTCGATGTCTTATCTACC AAGAGATAATTAATCCTCTACTTCATCCATCTGATGAAGGTGCTCTATTT TTTTGTGTGTTTTAGTCACATGGGGTTCATGCTTGATGACCATGGGCTCT GACTGATTTTGGTTGGAGCAGAGAATATCCGTTTGTGCTTGGAACTAACT TTTATTGTATTTGTTTGTGAGCTGGGTTCATCGGACGAATGTGGAATTCA GCTTTCAACTAGAACAATACTTTTTCAGTAGTACGAGCGCCCAGGAGATA GTGAAGTTATTTTTTTTGTGTTTTAGTCACATGGGGTTCCTGCTTGATGA CCATGGCCTCTGCACTGATGTTGGTTGGAGCAGATAATATTCGTTTGTGC CTGGAACTAACTTTTATTGCAGTTGTTTGTGAGCTGGGTTCATCAATCGA ATGTGGAGGTCAGCTTTCAACCAGAACACTACTTTTTCAGCAGTAGGAGC GCCCAGGAGTTGGTGAAGTTATTTTTTTGTTCTTCAGGTTTGTGGCTATA TATTTGTTATGATTAGTTGTCATCTGAGATTAGGGAGAGAGGCGCCTCTC TACAACAATCTGTAGTTCACATATTAGGTATAGGCATTAAAATATAATGA ACATGTGTTTTTTAGCTACATGGCTTGAAGCTTTAGGATTCCTAAGATAT AGTGAAGATTGTATCCTCTACTGGAACTATAGTACCGATATAATCCCTCC ATCCCAAGACTTAAAGTCTATATCTTTTTTGAAAAGTCAAGCCATGAAAA GTTTGACCAAACTTTTAAAAAAACTATCAAGAACTATTATATTATATACA TACCATGTGAAAATATGTTTCACGATGTATGAAAGGGTATGGATTATGTA TCATAAATATTAATATTTTTCTCTTAAAACTTGGTCAGACCTGAGGTAGT TTGACTTTTGAAAAACTTAGGTAGTATTTGGTATTCCCCTTCCTTACATA ACAAGTCGATTGGAGGTCTCAGGTCTTGTTTGATGCCATATTCAGCGAAG CCTTGTTCCTTTCAAAAAGAAGTATGAGTAAAGGGACTCGCCATTTATAT TGCTCTTATGTTTTTCCGGTTGGTGTAAAGCTGTCCTGATAGCAGTGGTT TTATTTGGATAAATATTAGACCAATTAGTAAGGTTATGCCTTGATCTAAT ATCAGCAGTGAAGCTAAAGATGTACATATCGTGCAAAAACACTAAACGAG AACAACAGAGATCGGCGCAGCAACGCGCGCGAGGTCCATCTAGTTCCCAC TAAAAGGAAAAGGATCTTGATCTTGGAAGTTCTTTCTCGATTGAGCATGG ATGCAAGGAAGAAGTTCACAATGAAGAGCATGAGAAGATTTCTCGATTGA GCATGGATGCAAGTACCGAACAAAGGTAGAATCTAGAATCTGCTACTGTT ACCGAACTTTACTCAAATACTGTCATTTTGTCATTACTACTGCAGATTGC ACTACTTCCTAAGTTACAATATATATTTATTGTGGCCATGGTTAGCTTGG ATTTGCTTTCTTAGTTACATTGTACTTCTCATTTGAAAGCTCTGACAACA ATAAATAAACCAAATATGCAGAGCCATGAACTGTTCAGATTCTACTGCCT CACCACAACTTGTGACGGTTCAAGTGATTCTAATTGGGTTTATACCTTCA TTTTGATCCTTTTCTTCTTCTTCAGGTATGATGCCTTCTTCAGATGGACT TCAATTCATATCGAGGAGAACCATGGCTTTCTAATATGCTGTTGTTGGGG ACCCGATCGAGGAGAAGCTAGTGGGGAACACCGAGCCTGGAGGTGGTCTC GCTGGTTGAGGAGGAGCCGATGACGTGGCCGAGGAGCACCGAGCCTGGAG CAGGACCTTGTCGGCCATGAGGGGAAGAAGGGACGCGGTGCTGAGCGAAT TAGACCTTGCCGGCAAGGTGCTCGCTGCCTTGCCGCTGCTGGGATGGTGG CCGGCAAGCTTCCCTGGCTCTGCCGCTGCTAGGGCTGGTGGCCGGCAATC TATCACTACCGGAGCCGGTGACCGGCGAGCTGTTGCTGCTGGGGCGGTGG CGATGATAATCAGCTGGTGAGATCGCCAGGTCCTAGCAGACGAGGTGTGT TGTTTTAGCCAACGATTTGCTGCCGTTGGGGGAAGGTGCTGGGCAGGACG CAGGGGAAGGTGCTGGGCCAGACTGTTGGGCGAGGTGCTGGGGCGGCAAC ACGCGACGAGCTGGGAGATCCGTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.