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GrainGenes Sequence Report: AA001972

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Sequence
AA001972
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA001972
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTTTGAGATTCGTGTTTCTCACGTGTCGCCGTCCATCCAGGTCTCCTCTG
TGTGTTGCTTGGACAGTTGCACGGTTGAAGGCGACCGGCGACCTCCCGGA
TCTCTCCCTCTGTTGCTGGAGCGGCTGAAGGCAACGCCGGCAGCCGCCTC
AGATCCGACAAATCCTTGACAGAACCCAGCTGAGCCATTCATCGGGTTTT
CATTCGAAATTCGTTCAGATTCGATCGGATCCTAACGATTCTGCTCCCCG
TGTTCACCCCCCGCAAGCCGGCGGCAGCTGTGGGCTTGCCTAGTGTCTCG
ACCGCTGCCCCGTCATCGACGGCGGCTCCTCCCCTGTCCAAGTGGAGATC
CGGGCCGTCGCCTCCCGGTAAGCCACCGCGGCACCGCTTCTGGCTGGGTC
CGATTTCGTGGGAGAGCGACGAGATCCCCGCTCCGTTCTTGCCGTGCGCG
CCTCTGTTATAGGATTGCTCGCGGATTTCGTTTAGATGTTGCTGATGGGC
TGTGATTAATCTATGCGCACGTAGGGTTTCTGCGGAGGCGCAGGCGCCGC
GCCTGCGCGTGCAGAGGCCCGGGGTCGCCGGCGAGATGAAGGGCGTGTCC
GTCCCTGCGGTTGTAGGCATGCCTTCGCCGCTGTTTCTTTGGCGGTTTAA
GGTTAGTTATCCTTTCAACCCCTTCTTCTTCTTCGCTATTGTGCCGTAAA
ATGCATTAGTTCTAACTTCTAAGCGCAAGTTTCACACTGATTTACGATTC
TAGATGGTCTGTGCTTGTTATAACCCACAGTATATTTTTTTCTGCAAGTA
CTGTAATAGTGTAATGTACCTGCTCCTGAAAATATGCGAATTAGTACCTT
CTTTTGGAAGAATCCCCACGAGTGATATATATATATGTCAGGTTCATCGT
GGTTAGTACTTAGAATGCAAAGTTGAGAATAGTGGGAAAAATGGCAAGTC
CATCACATCTGATGTTTCCCTCTTTCCTTTGCCTTGAATATGACATACCA
TAGCTCTCTGTTAGTCTAGGAGGCGCCTTTGTCCATGGCAGAACAGCGAC
ACTATGACGATAGTGTCAATATTTCATGCATCATGTTGCACAAACTGCCT
GCGGAGTTTGTTACAGATGATGGGATGGCCTTTTGAGCATTGCCATTTTC
CTGTTAGAGGTGCTGCTTGTTTTCTTTGAAGATTATTATTGAATTTCCTC
TAAGCGGCTCAATCATATGTATGTGTCCTTAAAAGAATATGTATATTTCC
TCGTTCCTCGAATTGTATAAATCCTGTTTTCTTGATTTCATATCTGCCTG
GCCTGGATTTATCTGTCAAATTGATTATCAATCCGTCTTTTTCCCCAGGC
TATATTGTTTCTCATGTGGGGTTTCTGCTGTTGCAAGGTCAGTCTCCATA
TGATCTGTCCCTGACCTTTTTCATGAATGAATTGATTGTAGGGTAAATAG
TTCTCTTGGGATTACAGATAGGGTGGGACTCGGTAATGAGAATGAGTGCT
GATCTGCGAGACTTATTTCTCTACGAGGCATTTTTGTACTATAACCCTCT
CCTTCTTGTGGTGAGTTTTTTATTACTGTACGTGTAACATGCTCAACGTA
TATACCTGCTAAGACAAAAAATAAGCCCCTCCCTATGCATCTATGTAATT
GTGCTTAGTGTTCTTATTGTAGGCACTAATGATATGGCTATGGGGAGTAA
ACTTGTGGGTCTTTGCACAATCCTCAGTGAATTATGTAAAAGTATTTGAT
CTTGCGCAAACACACTTGTCACACCGAGAAATTTGGAGGGTACGCCCATC
TATCTCTCTTGATTGCATTTGCATTTTTAAATGTTACATGAGTCTGGACT
TGACGAAGTTATTTTTCCTGTTTAGTTCATTTGAACTGACATGGCTATCG
ACAGAACTAGTCTTTCCAGAGGACTTCTGCTGCATACATTTCTTGAGTAT
GTCTGCGACATACAGTTCTTGTGATTTGCGACAATGTGTAGAGTTTCCAG
AATGTGCCTGTACCACACTTGTTCTAATGTTAACTTTCAACTCCACAGCA
TTTCATTTAGTTGCCAGTCCATTTTTTCTCACTGCAACTACACTTGTAAA
TAATGCCTACTGTAGTTTCACAATAATCATGAATTATTATTGAAAATAAC
CTGTCCTTGTTGCATTTTCTAGTGTGAGTGGTCTGAGTAGCCTTCTTTGT
AAACCTGGCTCTCTTTACTTTAACCTGCATCATGATCTTTTGTGCTAGAT
ATGTTTTATTTTTGTCTTTTATGCATTTTTTGAGAAAACGCAAAAGCTTT
GCGTTTCATTATATTGCAAAGGTAGAGTTTGTTACAGCCCACAGAAGGGT
TTTACAATCCAGGTACAAAAAGGAAAAACTCAATGCACATCCCAAGTTGT
CGGGAGAAGGACACCAAGTCCCTTGGCTCCTGCAAGCACCCAAGCTGATG
CCTCGTCTTTGATCTTGGTAATCAGGGGCAGGGGGCGCGGCTGGGCGCGC
TCGAAGACGCAGTCGTTGCGGAGCTTCCAGATCATCCAGGGCACCAGCAG
CGTGATCGAGGCCAAGCCTTTGTGCATTGGCTTGGGGGTTTGTCGTGTCG
CTGCCGTCCACCAATCGAAGAGGGAGGGCTCGTCGTGGGGTGGGGTGCAA
GGCAAGCGCAGCCAAGCAAGGATCTCTTGCCAGATATGCTTGGAGAAGGG
GCAGGAGATCATGAGGTGGTGCATTGTCTCCATGGCCTGGTCGCATAGCA
TGCACCTGGGGTGGTGCTGTAGTTGCCGTCTAGCGAGCCGCTCTGCCGTC
CAGCAGCGATCAAGGTTTGCCAACCAGTGAAAGAACTTGACACGGTTAGG
CGCCCAAGTCTTCCAGACAAGCCTCCAAGCAGCGCACCTAGTAGACCCGT
GGAAAGCTGCCAGGTAAGCCGACTTGGCAGTGTACACGCCATCTGCAGTC
CATCGCCAGACCCATTTGTCTTCGTCGGGGGTAAGCACTGTGGGCAGAAT
ACGTTGCCAGAGTTGCAAGTATTCTCCCACCTCTTGATACCCAAGGACCC
CTTGTATGTCTCGGGCCCAGCCGTTTCCAGCGAGGCCATCAGCAACTGTC
CTCCTGCCGCGCCTGCCTTTGGGGATACAGGCGTAGAGGGCCGGTGCAAT
CTCACGGACAGAGTATCTGCTGATCCAGCGGTCCTCCCAGAAACGTGCGG
TCAGGCCATTCCCAAGCTTGATGTAGGTAGAAGCGAAGAACATGTCCCGC
TCAGGGCCGGTGAATTGCATGTCGAGGCCGCTCCAGGCCCGAGCATTGTC
AGTTTTGCTGAGCCATAGCCATCGTAGACGTAGTGCGATGCAGGATAGCT
GGATGTCCTGGATTCCGAGGCCACCCAGATTGGTGGGCCTGCTAACAAGG
CGCCAGTTGACATGGCAATGGCCGCCTTTGGCCTCCCTCTTTCCTTCCCA
TAGGAAGCCACGCTCGATCTTCTCCATCGCTCTGATGATCTTGGAGGATG
GCGACAGCACAAGCAGCTGGTGGATGGGGATAGCGCCGAGGACGGACTTG
ATCAGGGCCAGCCTACCCGGTTTCTGCATTAGGTGCGCTTTCCAGGTCGG
TAATCTGGCGGCCATCTTCTCCACAAGGGGTTCCATCTGTGCGGACGTGG
GCTTGCGGATTGTGAGTGGAATTCCAAGGTAGGTGATGGGGAACTCGACG
ATGGGGCATCCGCGGGGCTGCAGAATAGTGGCGACCTCGTCAGTCTCGCA
CCGTAGCAGCGTGGCCGAGCTTTTGGAGTAGTTCACCAGGAGACCGGAGG
CCTGACCGAAGAGTTGGAGGATTGCCTTGGTGGCCTCGATGTCTCCCGAG
CAAACGTGGCAGAACAGGATCACATCATCCGCATATAGAGAGACGGATGG
GATCAGGCGCCTGGGGTGGAGCTGCCGTAAGATCCCGAGGTCGATCGCGC
GCTTGAAGATCTTGCCGAGGACGTCGACCGCGATGACGAAGAGCTGGGGT
GACAGTGGGTCGCCCTGGCGCAGGCCCCGCCGGTGCCAGATGGGTGGGCC
AGGCTCTCCATTGATCAGCACCTTAGTGCTGGCCGAGGAGAACAGGATGG
CCAACCATCCAATGAAGCGGTCACTAAAGCCCATGTGCCGAAGGATCTCG
AAGAGGAAAGGCCATGAGAGGGAGTCAAAGGCGCGTGCCAGGTCGAGCTT
GAGCAGTGCTCGTGGTGCTCCGAGATGGTGAAGTAAGCGTGCCGACTGGC
GGACAAGGACGAAGTTGTCATGCAGGCTCCTCCCGGGGATGAAGGCATTT
TGCACCGGGCTGACCATCGTGGTGAGGCGTGGGGCAAGACGTAGCGATAG
CATCTTGGCGAAGATCTTAGCCACCAGGTGAATAAGGCTGATGGGCCGGT
AGTCATTGAGCCGACTCGCCTCGGCATGCTTGGGCAGCAGGGTCAGGAGA
GCCTGATTGAGTTTGCTGAACCCTCTGCCGCGGAGCTCATAGAGTTGCTG
AAAAACTGCGACAAAGTCCTCCTTGACCGTGCTCCAGCAGGCCCTCAGAA
ACTCAGCAGTGAATCCGTCCGGCCCAGGGGCCTTGCGCGCAGGGAGCTTC
TTGATGGCGTGCCAGATCTCATCGGCCCCGAAGGGGGCGTCCAGTCCGGA
AAGGTCGTCGGCGTGCTCGATGAAATGGGTCAGGTCCAGCGTCCGCTCCC
GATCAAGGCCAGTGCCCAGCAGCTCGTCGTAGTGCAGGATCGCGGCCTCA
GCCATGTCACCGGGGTCAGTGAGCAATCTGTCACCCACCCGAAGGCCCTG
GATTCGGTTCTTCTGTCTACGATAGGAGCACTGGCGGTGGAAGAAAGACG
TGTTGGCGTCGCCGTCTTTGAGAACCGCAATGCGAGCCCGCTGGCGCGCG
ATGGTGCGCTCGAGTGAGGCGAGGCCCAGGTACGTCACTTTGATCTTCTT
GCGGAGCCAGTCCTCGCAGGCGGATAGGGGCCTGTCCTCCTGGGCCTTGT
CAAAGCGCAACAGTAGCTCCCTGGAAATGGCCATCCTATGCCTCACATTC
CCGATGAATTTCGCATTCCAGCTAGTTAACTTGCGAGCGGTTGCCTGGAG
CCTGAGCATGAGCTGGGTGAAGGGGTCGCTGTCTTGGACGGACTGCCACG
CCTCTAAGACGACCTCCTGGAAACCATCTTGCCGTGCCCAATAGTCCTCG
AAGTGAAACCTTTTATGTAGCAGGAGGGCGGGGGAGCAGTCAAGTAGCAG
CGGGCTATGATCGGAGACCACCGAGGCAAGGCAACGCAGGTGGCACTCGC
CAAACTGTTCCTCCCAGTCAGCGGTGCACAAAACACGGTCAAGCAGTACC
AAAGTGGGCGGGGACTGCTCGTTAGACCATGTGTAGCGGCGGCCGTTCAG
GTAAACCTCCTTGAGCGCGGGATCGTTGGTCACCCGGCGGAATCTGTTCA
TCATGCGGCGATTGATGTGGCCATTGTTCTTGTCCTCGTCGTGCAGGATG
AGGTTGAAGTCTCCGCAGAGGAGCCAGGGCGCGTCGCAGGCTGCCCTGAT
CTCCCGGAGCTCGTGGAGGAACTCAATCTTGGACGCATCCTCTTGCGGCC
CATAGACCACCGTGATCCACCAGGGCGCTGCGCCCTCCGCAGTGATCGCC
GCGTGCGTGGCACAGCTAACCTTAGCCGTGATTGTGTTAGCGGTGAACTC
AGGCTCGGTGATGGTGAGATCGCGGCTCTTCCAAGCCAGGAGAATGCCCC
CACGGGTGCCATCTGCCGGAAGATAAACGTAGTCGTCGAAGTCAGAGCCG
AGTGTCTCGAGGACGATGCGGGAGTGGAGCAGCTCCATCTTGGTCTCCTG
GAGACAGACGATGGAGGCGTCCGCGGTTTGGACCAGGGAACGAATAGCGA
TGCGACGGGCGCGCGAGTTTAGGCCACGCACATTCCAAATGATGATGCGC
AATTTCGAAAAATCCATAAACACAAGTTCGTCAAGAGAGGGGACGTCCCA
CGGCTAGACCACAGTAGGGTCTGCCTGCAGAATCTCATCAGGCAGCGTGT
GCCCAAGCAGTGCGGCAATGGCAGTCAGGACGGGGAGGGAGTCCATGTTC
TTTATGTTAATGTTATGCTGTGTGAATTCTCATATCACTTATATCTAACA
TAGTATTCTGCCAAACTAACATATTTTTTGTTCAATTGACAGTCTGCTGC
TTGGCTTACTTTAATTGTTCCCACAAGTATGACAGCCTACCTATATCTGT
ACTCACATGGGGAAGTCTCGCTTGCTGCATCTCAACCAGTGTAATATCCA
GCCCATTTAGTCGCTCATTCCATTCTTCTTATGTGCTTGAGTTCATGAGA
TCTTTTGGCCTCTACAGTGAAAAGGGATATTATCCCCAGAGCTATATGGC
ATGCTAAAAATAGTGTCCTGCTGAGTACGTCTGACTCCATATGCAGTGTT
AATCAATAAGTTGGAACTTATATTCTGTCATAGTAATAGATACGAGCAGT
AGTTTGAATCTACTTTCCTGAATCATATCAATTGAAAGGTCTATTTCTTA
GCATATCACTTCATTGTTCACTGCACTTTGCCTACTGTTCTTAAAGTTGA
ATCTATTTTCCTGAACCATATCAAGTGAAAGGTCCATTTTTAGAACAGTA
TATGCGCAAGAAAAAGTAACGTACTCTTAATCTTAAAAGTAATTAATGTA
CCTGTCTACACACTGTTGTTTGCTTGTAACAGTAAAGTGAGGCTGAAGTT
CTGCTTGATGCACGGTCCACTTGTTTTTTCATCAAATTGAAAAAAGGAAG
CATGCTGTGCATACTCTATATTCTGTAATGATGGATTACTTTTCGAACTG
AGGGTGGTGAAATTGATGCATCTTTCTGTTTCTATGCAGGTTCTTTTGTA
TGCTATCCTTCTGATAGTCCTCCTTTCTCCTTTTGATATGTTTTACTTAT
CCTCGCGCTTTTACTTTCTGCGGACGATGTTGCGTATAATACTTCCATTA
CAAGTAAGTTGTTCATAATGTTAAATTTGTTATTAATATGTACTATACGT
TTTGCTTTCCACCATGCTAGAAACAGTGCAGTATGCTAATGTGACCATTG
TGGTATCATCTATACGATTGTGCTTACTGTTTCCTGTTGAGCCAGCAGTT
CTATCAATTGAAATTCAATAATTTCCTGTGCCCTTATCTGCAGGCAATCA
CATTCCCCGACTTCTTTTTGGCTGATATCTTTACATCTATGTCAAAGGTA
TCTTCAATTGATTGTGGATTGTTTTGTTTAGCTTATCGCTGTTGAAGATT
GATCCTGACAAAGGAAATGTCACTGATGGAGATGCTACAACATGAGTTCA
GTTTTTAAATTTGTAATTTGTGGAATTTTGGTTCAAATCTTGCATTTCTT
GACAGGTGTTCTCTGATTTGGAACGTTCAGTTTGTCGCATGGTCAATCGT
CAGGTTAATTTTGTCCATTTCCCTTTTAGTATGCTCATTTTGCTGTCACT
CATAAACATTCTCCATAGTATTGGCAAATAACATGCTAATACTAGAATTA
CTGTTGTTCCTCTATAATGTTTATTTTGACATTTTACAGGTAGCGACAAT
CGCATGGTTTGAAGCTGATTCAGTTTGTGGTAGCCACTCTATAGCTATTC
CTCTAGTCCTTGTGCTCCCTTATTTGTGGCGTTTCTTCCAATGTCTTCGA
CAGTACAAGGATACAAAGGAGAAGAGTTGTCTTCTGAACGGTATTTTTAC
TCACCATACAGCAGCTCTGATTGTTCATTTATTTTATTTTACTAGATGAC
TTGGATGTTTAAAATGTAAGATAATTGTATGTTTTCATACCTGTTTTGGG
ATCATTCACCCGTAATTTTCTCTCAATTCCAGCACTCAAGTACTCGACAG
CAGTCCCAGTGATTTTCTTATCGGCGCTAAAGTATCATGTATTCCCTGAG
CAGTGGGCCAGCTTTTACCGGCCCCTCTGGCTTGTTTCGGGTGTTATAAA
TTCTCTGTATTCCTTCTACTGGGATATAAAGCGTGATTGGGATTTGAGGT
GCCTGTCTTTACTGAAAATATTTTCTGCTCCTTAAACATGTTTTTTACAC
TGTTGCTAACGAGCTTTTCTCTATGCCTGCAGCATATTAACCAGGATATT
CATGTTCAAAAGCCCAAGTACATGGACAAATCTTCTTTATGGGCGGAGCT
GGGTATAGTCTTTGAATATATCTACAGTTTAAGCTGCCTACCTGGATATG
TTTTTCACTAGCACTGTCGTGATTGCTCTATGCAGGTGTATTACTGGTTG
TTAGGCAGCAATCTCGTTCTCCGCTGTACATGGACATACAAGCTGTCATC
GCATCTTCGGCACAACTACATCACAGTGTTCACAATAACAGCTCTGGAAA
TGGTGAGGCGGTTTCAGTGGGTCTTTTTCCGTGTCGAGAATGAGTGGAAC
AAGATGACAGCCAAGCAAAATTTTGAAATGTCGTCTGATATGCCTTCAGA
AGCGGACAGGCTACTGGAGTCTAATAGTCACACGGTATGAATAGCTTGAG
AATCGTGAGTTCGTGACTCTCATTCATCATATTCTTTTCACGTGACCCTT
TACAGGCTTAGAGCCAATTTTAGGTCATATGGTTCTGTTTTGTTTGTAGA
GCTCAGAAGGTCTGGGATACACGATAGGTTTGTAGAGAAAACTGAAACTG
CTGGTGCTAAGCATGTAATTCTATTGAGAGGTATTTGTTGACACATGAAA
TAATAATAGTAATACAATTTGTGAAATCCTTGGGTTTAGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.