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GrainGenes Sequence Report: AA001838

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Sequence
AA001838
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA001838
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGAATTATTTACTCTGTCCACACTCTATGAAGTTCTTGACCTCTCTTA
CAACAAACTCTCTGGACCTATACCTATGGAAATTGGTGGGTTAATCAACC
TTCCCCCTCAATCTTTGCAACAACCGGTTGACTGGAGAAATTCCCTCAAC
TTTGGGTGAGTGCCTCCATTTGGAGTCTCTCCACCTAGAAGGGAATCTAA
TTGATGGGCGGATACATCAATATTTCACTGAATTGAGAGGCATGTGTGAC
ATGGATCTTTCTCAAAAGAACTTATCTGGTCAGACACCAGATTTCTTCCA
GGCCTTTAGCTCCTTGTCACTTCTCAATTTGTCATTCAACAACCTAGAGG
GACCCGTACCAACTGGTGGGATCTTCCAGAATGCAAGCAAGGTCTTCGTC
CAAGGGAACAAAGAGTTGTCTGCTGTTTCGTCGACACTGAAACTGCCGTT
GCCACACAGCTGCAACTTAACACATGTATGCCTCCAACATACCGAAAGTA
GTGGGATTTTCTGCTCTTTCGTTGGTCATGTTATCATGTATTGGACTCGT
CTTTCTGAAGAAGAGAAACAAGTTCAAAGAAGTCGCACTTCCATCCGTCA
AGGGATTCAACAAGATGGCATATGCTGATTTAGTGGAAGAAACAAATGGT
TTCTCTTTCAGAAACTTGGTTGGCTCAGGGAAATATGGGTCCGTGTACAA
AGGTAGGATTGAGTATGAGGAACATGCAGTTGCTATCAAAGTTTTAAAAC
TTTATCAACTTGGAGCAGTAAAGATCTTCCTTGCATAGTGTGAGGCTTTG
AGGAACACTCGTCATTGTAGTCTTGTAAGAGTGATCACTGTGTGCTCAAC
AATTGATCGTGCAGGACATGAGTTCAAAGCTATTTTTCTTGAATATATGG
TTAATGGCAACCTGGAAAGTTGGCTCCATCCAAGCCTCCACGAGCATCAT
CCGAAAAGGCCGTTGAGTTTAGGTTCAAGAATTATAATAGTGGTAGACAT
AGTTGCTGCTTTGGACTACCTCCATAACCATTGCATGCCTCCTATGGCCC
ACTGTGATTTGAAGCCTAGTAATGTCCTTCTCAATGATATCATGGGCGAC
AATTATATTTCTACAAGCTTAGTGGCCCCAAGAGGATCTGTTGGATATAT
TGTACCATGTAACAATTTTTGAACAAAAGATGGACGATTTTTGCAAATAT
ATTACATAGTCTCCTACATATTCAGGTTTTTACTTACGTTTTAACTCTTG
TAGAATTTTTGTTTCAAATTTCAACCCATTTGTGTTAAGTAATTGTTTGA
ATAAATTTGCATACTGCAGAATATGGCTTTAGGAGAAAATATCCACGGAG
GCTGACGTTTGCAGCTATGGAATCATCGTCCTAGAAATGCTCACTGGGAA
GCGTCCAACTGATGACATGTTTAATGATGGCCTCAGCCTTTACAAATTGG
TCGAAGAATCATTTCCTCGAAACATTGCTGACATTCTAGATCCTACAATT
TTTCCTAGATATGGTGAACAGCTCCACGTTTCCTGGTTGGTAAGGGGTGA
TACGTCGGAAACGTATCTATAATTTTTGATGCTCCATGCTTGTTTAGTAT
CTACTTTGCTTTGCTTTGTCTTACTTTGAGGTGTTTTTATATCTTTTCTG
AAACTAACCTATTAACAAGTTGCCACAGTGCCAGCTATCTGTTTTCTTCT
GTTTTTGGTTTCAGAAAGGCAGAAAATCAATATTCTCGGAATTGGACGGG
ACAAAATCCAAAGTCAATAACTTTCCGTGGGGGACAAGAATCCAGAAGAC
GAGCTGAAGACGCGAGACAGGATGGCCACACCACCCCCTAGGCGCCGCCA
AGGGTGGGCCCACGCCTAGGCAGGGTGTGGGCCCCCTGGTTGCCTCCCGG
CCTCGCCCCTTCGCCTATAAGAAGCCCACGATGCAGAAACCCTAAGTACC
CGATCAATATTCCACGAAACCTTCTGTAGCCATCGTCACCGTCGTCCCTA
GATCGGGGGGCATCTGAAGTTCTTCCCGGCACCCTGCCAGAGGGAAGATC
ATCCTGGAGGCCTTCTCTCCGGTATGATGCATGACTAGTTCCACCTTGGA
CTATAGGTCCATGTAGTAGCTAGATGGTTGTTGATGGTTCTCGACGTGGC
ACTTCGTTGGTAACCCCAAGCGCAGGGTGTGAAGAGCACAACAAAAAGCT
TTCCCTCAGTTGAGACCGAGGTTATCGAACCAGAAGGAGGAAGGAAACGT
CACACAGGTGTTGCAAACAACGTGGAGACCTGCACAACACAAACTCAAGA
CTTTGTCCCAACGAATCAGTGAGGTTGACAAGCTCACCGGTTTGCTGTAA
CAAAGGATTAAACGTATGGTGTGGAAGGTAATGGTGGTTTGCAAAAAGTA
AACAAGTAATAGTGGAAGATATATCAATGGTAAAGATTGGACCGGGGTCC
ATAGTTCACTAGAGGTGCTCTCCTTAGATAAACAACATGGCATGAAGGGT
AAACAAATTACAGCATGGCAATTGACAGGAAATGAGCAAGGCATAACACC
GAAATTACTAGTCAAAAAGATCCTATGAGATTCGATTGGGAAATACAACA
AGATACATAGACCGCCATCCAACTGCATCTATGACTAGAAGTCCACCTTC
AGGTTATCATCTGAACCCCCTCGAGTATTAAGTTGCAAGGAATAGACAAC
TGCTTTAAGAAAAGTGTGTAAGGTAAACAGTCCACATGTTCCATGAACAA
GAGACCGTTGTTTCTCCCTAGTAGCAACAACACATCTATAACCGAAGATA
TTGATGTCACTTCCCTTGGAAACTAGAGGCATGAACCCACTATCGAGCAT
AAATACCCCCTCTTGGAGTCACTAGCAACTACTTGGCCAAGATATCTACT
AACAACGGAGAGCATGAAAGATCACAAACAACACAGACATGATAGAATCA
TAAAGACAAAACCATTAATCAAACTAACATAATAATCTCAATATCCATCG
GATCCCCGCAAACACAACATGCATGACTATAAATAGATTAGGTCTTCATC
ATGAACGGAGCTCACAAGATCTATACATGAAAGCACAAGGAGGAGATACA
ACCATCTAGCTACTACATGGACCCATAGTCCAAGGTGGAACTACTCACGC
ATCATACCGGAGAGAAGGCCTCCGGGATGATCTCCCCTCCGGCAAGGTGC
CGGGAAGAACTTCAGATCCCCCCGATCTAGGGACGACGATGGAGGCGGCT
ACAGAAGGTTTCGTGGAATATGGATCGGGTCCTTAGGGTTTCTGCATCGG
GGGCTTCTTATAGGCGAAGGGGGAGGCCGAGGAGGCGGCCAGGGGCCCCA
CACCCTGCCAAGGCGCGGGGCAAGGCCCACCCGTGCCTAGGGGGTGTCGC
CGCCCTGGTTCGCGTCTCCGTCTCGTCTTCTGGATTCTTGTCCCCGACGG
AAAATTATTGACTTTGGCTTTTGTGTCATCCAATTCCGAGAATATTTATT
TTTTGCCTTTCTGGAACCAAAAATAGAAGAAAACAGGCAACTCGCACTGT
GGCAACTTGTTAATAGGTTAGTTCCAGAAAAAAATATAAAAACACCTCAA
AGTGTAGACAAAGCAAAGCAAAGTAGATACTAAACAAGCATGGAGCATCA
AAAATTATAGATATGTTTCCGACGTATCAAGCATCCCCAAGCTTAACTCC
TGCTCGTCCTCGAGTAGGTAAGTGATAAAAAGAATATTTTTTGAGGTGAC
ATGCACCCTCATAATAAAGATGAAACCATTTGCAAGCATTGAAAGATGGG
ATCAAAGAACTCTAAAGATGTGCATGAAAGATGGAGTTCTAACAATAGGA
CATAGTAACTATGCATGCAATATGACAGGCTACAAACAAAGATCATGAAT
AACATGCATTGAAAAACGTTTGTTTTTTTCACATACAGAAAACAAAGCAT
AGTGGCAATCAACTTGTCCCTCATAGAGTAGCAAATAGATGCATATGACA
CCTTCAAAGTTCACAAGGGTGACTAGAAACAAATAGCATAAGAACAAGTA
ATATCACAATATGCATCAATCAATAAGTTTTGGGACACTGCACACAGAAT
GACAACTATGCTCTCTTAATGGTGCCTAAAGGTAGAAGGTGGAGACTCAA
ATAATGGTGGAAGAAAGGCCCTTCACAAAGGGAAGCATGGATTTCAAGTT
TCAAAAAGAGCTTCCAAAAATTATGGTACTTGTTAGCTTTCAGCCCTCAT
TGCCCCTATCATAAGCATCTTGAAGTGATTAAGGTTAAAGTGAACAAAGA
TGGAGTATATGCTTGACGAAGTATAAGTTGGCAATCTCAAGTCCCTTGAA
TACGAGGGCGACACCCCATGCTACTCAACTTCAGTCACCTGTAAGTTCTT
GTCATTGTAAGTATTTGCATATCATAGAGAACCGCCAACGGGGTACCCCT
TGCACATGGTACAGGAGATTTCCCATAACCAAAATGACAAGGCAAGCAGA
CAATGAGCATCTCAGCAATCTTTTTATTTACCATATGCATAGCTTTTTAT
TGAGGATGCTTCATAGATAGCTCACTATGGTGATGCTACAAGTTTCCACC
ATGATTAGGCATTGCTTAGGCTAGCGGTCTAGGCGTTTCTCAACACAGAA
TACAAACTCCATGGACTTACAAGTTCCCTCTTTATTTCACATCGGTGACA
TCCATAGACAAAAGAGCATGATATCAACTGAGTACAAAGTACAACTGCAA
TGTTGAAAACGTTCCCCGTGATAGCACGGTTCTGCTAATTCCAACGTATA
AGTGCAAGCATATACAACATAGATGACACAATGGTTCAAGTTTATTAGGG
GCAAAGAATATAAAGTGTGCCATCAAGTTTGTGAGGGCTTTAATCACTAA
GTTTTCACATAACAAAATAGTTTTTAATTGGAAGATAGCTAAAAATAAGA
ATATACTTAGAATGGTGTAACACACCATGCATAGGAATTTATAGTGGACA
CTTTGGAATAACTTGGTTTCTTGGGAGTTGGAAGCATGAGTAGAACTTAC
TCATACAAGTGGAGGCTAGCAAAATACTGAGAGCAACCAACTAAGAGAGC
ATAATGGCCATAATAATGCAGAGTAACAAAGCATTACTAATCAAAGCATA
GAGTGGTACTACAAGCCAAGGACTAAATGATCATAGATGATAATGGTGAC
TTGTGAGAGTCATAACATGGTGTGAGCATGTGCCAAGTAAACCCAAACAA
AGCATCAAAGGAGAATACCACAATACTATGTTTTTGCATGCTAAAACAAA
GCATAATTTCTTCAAGGAACACTAAGCAATCCCAATTGTTTGTAACAAGA
CATGCTACAGCAATAATCACTAAGCATAGAGTCAAAACAACACCTAGCAT
GTCATGCTAAAGTCTAAGTCACAGTCAATGCAAGCTCCTCTTGCACTTAC
AAGCAAGAACTTACTACTCCTTTCCAACACCAAGCAACTTATTTGCAAAA
CAACACAGCGAGAACGGGGGTCCAAACACTTTATTCAAGCAAACTAAACA
ACCTAGGCAAAGCAAACAAAAAATAAGATGCTCCAAGAACAACACAACTA
TGTATGAAACAATAAAAACGAAGTGTCTAGATAGAACTAAGCATTTTATT
GATGAAGATGGGAATGCCTTGGGCATCCCCAAGCTTTGACGCTTGTACCT
CTTGGATATTTCTTGGGGTGACACCGGGGTGGCATCCCCAAGCTTGAGAT
TTTGTCCATTCTTCATCTCATTGTATCATTCTCTCTCTACACCTAATTTT
TTTTCCTTCACACAATCTTCATTAGCAACATTAGTTTATTCAAAAGATAT
TAGACCTCTGACAAAGCTTTGGAACAGCAAGGCTTTTCACTAAAAACACA
AGCTACTGTAGTAACTCCTTCAAAAAGCTCAAGATCTAATCTATTTGTAA
TCTCCTCCTTGTGCTTTCATGTATAGATCTTGTGAGCTCCGTTCATGATC
AAGATCTAATCTATTTGTAATCATGCATGTTGTGTTTGCGGGGATCCAAT
GGATATTGAGATTACTATGTTAGATTGATTAATGGTTTTGTCTTATTGAT
TCTATCATGTATGTGTTGTTTGTGATCTTGCATGCTCTTTGTTGTTAGTA
GCTATCTTGGCCGAGTAGTTGCTAGTGACTCCAAGAGGGGGTATTTATGC
TCGATAGTGGGTTCATGCCTCTAGTTTACAAGGGAAGTGACAGAAATCTC
TTCGGTTGTAGATGTGTTGTTGCTACTAGGGAGAAAACAACGGTCTCTTG
TTCATGGAACATGTGGATTGTTTACCTTACACACTTTGCTTAAAGCAGTT
GTCTGTTGCTTGCAACTTAATACTAGAGGGGGTTCAGATGATAACCTGAA
GGTGGACTTCTAGTCATAGATACAGTTGTATGGCGGTCTATGTATATTGT
TGTATTTCCCAATCGAATCTCATAGGATTTTAATCTGGTATTGCATTGTT
ATGCCTTGCTCAGTTCCTGTCAATTGCCCTGCTATAATTTGTTTACCCTT
CATGTCATGTTGTTTATCTAAGGAGAGCACCTCTACTGAACTATGGACCC
CGGTCCAATCTTTACCATTGATACATCTTCCACTGTTACCTGTTTACTTG
CTGCAAACCATTACCTTTCATACCATACGTTTAATCCTTTTTTACAGCAA
GCCGGTGATCTTGACAACCTCACTGATTTGTTGGGGCAAAGTCTTGAGTT
TGTGTTGTTCAGGTCTCCGTGTTGCTTGCAACACCTGTGTGATGTTTCCT
TCATCCTACTGGTTCGATATCCTCGGTTTCTTACTGAGGGAAAACTTGCT
ACTGTGCTGCTTCACACCTTGCTCTTGGGGTTCCCAACAGACTCAACATC
AAGCACCAAGTTCTCTGGCGCAACCAAGGAGTCATCAAGGGGCTTTAGTC
CCGGTTGCCCAACCGGGACGGGGCAATCAGGACTAAAGCTCCAACCTTTA
GTCCCGGTTCGGTCAGGAACCGAGACAAAATATGCTCCAGGTGGTTGCTG
CTCCACGCGAGGGGGTGAGGAGCAACCGTCCCGGTTCATAACACGAACCG
GAACGAATAACTCTATGCCGTGGCAGAGATTTGACACATTTCTCTGTTGC
GACAGAGATTTCATTTTGGTCACTTTTTTTGCCGCGGCAGCATTTTGGCC
AATTTTTGTGCCACGACAGAGAATTCATTTATATTGTTTTATTTTTTTTG
TTTTTTGCACTCATCAATAAATTGGAACCATTATATTACACAACATCATC
ATGACAATAGAGATCCAAGTATCGAACATATTACATTCGATACACGGGTT
TCATGCACATATATACATACAAAATAAGCTCTTTGTATAGTCTCTATTTC
CTATACACCCGGTTCCGTATAGTATTCTCCTTTTGGGTTTATGATTTCTG
CATCTAAGAATCCCGCCAATTCCTCCTGAATTGATCGTATGCGATCCTTT
GGCAGAATACCGTCCCGCAGCCGTTCGAGCTAATTTAAAAAAGGAGTCAA
CCTATATGAATGAAACTAAACACAATTTGATGATAATAAAAAACTATAAA
AATTGTTTACGTGCGTTAAGTTGCTCTAAATTTCTGCCCTTCTCACAGCA
TGTCTGACGGATGAATTCGCAAACATAGTATCTACATAAATTATTCCCTG
GTCCCTGCGTCAGGCACTTTACGAGAATAGAGTTTAACCAAAATAATAAT
CAAGCATGATAACTATATCAAAACTAGAATCAAAGATATGCGCGGATCTA
GCTAGTGGTACTTACATCTAGTGGTTTAAATGTAAGCTCCTTTTTCCAAA
CACCCCTAGCCTTCTTGTGAACCGTTTCCAAGCGCTGCCTAGCGAAGAAA
ACGAATAAAAAGAGTTATTAATTACTTGATATCATAAAATTGACGAACAT
TGCCGATATAATGCCGTAATGATTAGAATTACCGCTGGAGCGTCATCTGC
ATGTCCGCCCACGTCTCAAGGGGTTTATGTTTTGAGTCCATGACTAGTAC
TCCATCTTTGTCGGGTTGAATGATTAGGAGAATATAGTGGAAGTTGCGTA
TGCATAACTCATCAATTATACACTTAACGTCGAGTAAGCGAAATAGAAAG
TGTATACAAGACAATAACACTCACTCAAAGTTGTAAGAAAATAGTATTTC
CCTTCTGGTTTTTTGAAATCTTAACGTGTGTACAATATTATCCTCCGTAT
CCTGGGGTCTTGCTTTGAGATTAGTTTGATGAAAAAAATATGGGTCAACG
AACCAAATGTCATAGATTTGTCCTCTGCCGCATTCGAGAATCTTCATTCT
GCATATTATAGTATGATTATATACATGCAATAAACGAGGTGAGATAGCTA
GAGACTTAATTATAGAATTAGTACTTACAGACAATAGGCATTGATGATCG
ATTTTTCCAAGGCGTCTTGATTGAATAATTGAAATAGTTCAACAAATTCA
ATGGCTATCACGTCATCTTATTTCTCGTAATGATTTTTTGTAATCCTCAG
CATTATCCAGTTAGCCTCGGCCTTTGTGGCATTCATGTATCAGTTATGCA
ATCTTCGCATTTTTGTTGGTAGATTCTGTACCTCTTCAGGTTTGACGAGA
GGTTTCCCGTACTGGTATTTGTATGCTACTTCACCTGTGAGGAAGTACTG
TAATTAGGATAAGTAGTGGGCAATACTCATACCTTGAGCAGCGGCCGCTT
CTCCGTATAGTTCAACTACCTCTAGATCATACAGATCTTCGGCCGCATAT
TTGCTCGACCCCACATTGGTATGAGAAATCACCTTGAGAGGGGCGCAAGA
TTGTTTTTTTTTGTTCTCCGAGCTGGGGAATAGATTTCCCGCTTGCACTA
GTGCTCTTCGACAGATTCTGTGACGCATGTGACTTGAGAATAGAGAGCTC
ATAGTCTGATGACAGCTTTGGCTCGGGTTGACGAAGGCCCTTTAGCATTT
TGAACACTCGGGCTTTATCTTCTTCGGTGCTGGAGAACTCTGACTCTTTC
GGCCGCCTCAGCTTAGCGAAAAACGCTGTAATTTCCGCCTCGACGATCGT
CGCGGTCTCCTCTTGAGTACAGACATAAGCTCTCTCGTGACGGAACCGGA
ACTAATGTTCTTGACGCGGACGAACGTATGACCTGTTTTCTACTAGTGTG
ATGACAAAATAGGAAGACATTAGACCTAGAAAATCATCAAACGGCTGGAA
CTTTTAGCTGCATCACTGAGCTCGCTAAGCTTGGCCTCTTATGCGTTGCA
GAGGCACCTAAAGACCATCCATCAATGCAAGATGTTTACACTGAAGTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.