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GrainGenes Sequence Report: AA043497

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Sequence
AA043497
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA043497
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GTACAATCCATCATCTTCGGAACATATAAGAAGTTGCATTTGAAGGATAA
CCGGACAGATGGGAGGCATGATTATGCTGAGAGACAACAAATGGAAGCAT
CGGTAAAAGATCCTGAAGCAAAACTCTTGCACTAATTTTATCGAACATGT
GGCGAACAGCTCAATATCGGAGTGATTCTGTGAAGCGCGGAGGCAAACAA
ACATCAGGCAAAACAAGACAAAACTCAGCGAGCCGCCCGCAGAACTGATG
GCTGGCGATCTGGCATGCAGGGGAGCGCTGGAAGCTGTCGGCTGGCTGGT
TCCTGTATACTGGGCAGACACTGGGCGTGTACGCGTTGTCGCCTCATGCA
AATTGAATCGGCAAGACCAAGCAGCGGAGAGGACAGACGGACCAAGGAGG
CAGGGTGAAGCCAACAACCGTATGCGGTGGTGTGGCATCCCGCAAAACCA
CTACTAGAAAATCGCGTTGTTTTTGTGCATTGCATCGCCATCATCATGCA
TTGTTTGTCTGAACTATTTCGAAAAACCTAGTTTTGCTTTGTACAAATAC
CCCTCTTTATTTCAAAGGCAAAACCCCGATCGTATCGGATATTTTTATTT
CCCTAAAAACTAATTGCAAGTGGCCTTGTTTTAAAATAAACAAAACCAAA
CAAACACATATTTACAAAACCTAAACTCTAAATCCTAGTCCCACCAAATT
CTATCCTACCCACCAACCGCAGCATGCCACCTCACCCCTTCCCATTTTCC
TACCCACCCTGCCACCTCATCAATCCACCCTCTTTCCCCACGCCTTCTCT
CACCACAGCCATATCTACCCTCCCTCTCTCTCTCCCCACCGACAACCGGG
CCCCACCCGGCCCCACTCTCCACTCAACCTTCCACCCCACTCAGCCACCT
CTCTCCCTGCCCTGTGGGTCCCGCCTCCCCTGGCCACGCGCACCCCACGC
GCCCCCCACACGCCCCCCACACGCTCTCCACGCGGTCACGCCGCGGCCCA
CCCGCGCACCCCACGCGCCCGACCCCACTCCCCCTGGCCCACCTCCTTCT
CCTCTCTCCTCCCTCCCCGCTCGCCCCCGACACCTCCTCTCCATCCCTTC
TCTCCTTCTCCCGTGCGCCGCCCAACCGCCTCCGGCCACCGCCCCTCCTC
CCCTTCCCTCTCTGCTCCGCCACCGCCCTCCGCTCGCCTCGTCGCCGGCC
CTCCTCCTGCAGAGCCCCGGCCGCGCCGCCGCGGGACCCTGCCCGCCGCC
GCCGCGTCCTCCGTCGAGCCGGCGCGCTCCGGCCGCGACCGCGCCCCCTC
GCCTGGCCGCCCCCTCTCGCCCGCGCGGCCCTCCTCCGGCCGAGCTCGCC
CCGAGCGCACCCTCTGCCGGCGTCCTCCTCTGCCGCCCCTCGCCAGCGAC
CTCCGACGCCACCACCCGCCTCCACCGTCGTCGGGCCCGTCCTCCAGCGC
CGCCACCGCCCTGCTCCTCCTCGCCTCGCCGCCCGACGCCGCGCTCGCCG
CAACCCCTGCGAGCAGAGCCTCCCGCGTGCCACCTCCCTCGCCCCGCCGG
CCCCGAGCCCTCCTCCTCCGGCTGTCGCCCCGGAGCCGGCGCCGCCGCGT
GCTCCCGCCACCGCCGGCCTCTGCTCGACTCGCCGGCCAGGCGTACCCCC
CCCCCCCCGCTCGGCCTCTTCTCCAACCGCGGCGACCCCCCTCTGCCAGC
TCGCCCGCCTTCGGCGACCTCACCCTCCACCGCGGGGCCCGACCCGGCCC
TCTTCTGCAGCAGCTTCCGCGGGCCCCGCAAGCCGCAGACGCTCGCCGCA
CCCCTCCTGCGACCCAGGCTCCGCGCGCCGCTGCCCTCGAGGCCAGCTCG
TCCCCGACCCCGTCTGCGAGATGGCCGCCTACAACCGTCATCCGACCTCC
AGCTCGTCTCGACGCCCTCCTGCGACCAGGACCTCTGCACCAAGCCGGTA
GCACGCCCGCAGAATGTTCGCCCGTGTGACCCAAATAGGCCCGCTTTGCT
GACTCGTCCAGTCGCCCGAGAATGATGACAAGAACCCGTCAACAAACATC
GCCGCTTCCGGTGAACCACCGGCGCCGAACCGACACCGGCAAATAAAGTT
GAAACCGCTAAGATCTTCAATCGGATCCGAGGACACCGAGACCCCGGTGC
GACAAGTACTCCTTCCCGGACCCGAACCCCGGTACCGGACAAGTTCGCCA
TCGACCTCGAGAACGCCTACACGGGACAACAAGACCGCCACACGGACGCG
AACCCCAAGACCCTGAGGACCCGAACCGAAGACCGATCCGAAGCGCCAAG
ACCTCCGACAGGGAACCGACCAGTTCGCCCAGAACCGCACCCGAACCTGA
AGCACGACAAGATCTGCCCCGTTGTTCGAGAATGTTCCTGCCGAGACCGC
TTCCGTCGAACCCTGAGACCGGACCCTGAACCCTCGGAACCCCAAGATCG
CCAAACCTCCATGTGTGACCCCTTTTCTCGAGCCCTATTTTATAAATGTA
ATAACAAATTGTTGCATATTAAATTGTCATGTTCATGCATGCATCCTTGT
CTGTGGTTTGGGGGCCTTATGCCGATTCACTGCATAATTAAATAGGGGGC
CCATATGCGGGCAAATCTAGTCTCATATTGGCCTCATTTAAATTTGTGCA
TCGAACCGTTGTCATATCTTGCCTTGTTAAAACAACATTTAAAATGCAGG
GTAGCTAAACAACTTGAACCACTTGAATATTGTCGGGACCCCGGTTCCGC
TTAATATTGCCTAATTGCATCGCATCTTGCCATGTCATGCATCATACATG
CATCATGCCCGATTTTCTACCGTAGTATTAAATAGTGCGTCTGGTGTTTA
TTCTAGTGTTTTGGTTCTTCGCGGATAAGGCCGTTGAGTTGATGCGAGTG
TCGACCCGATCTTCGGTTGAACCTTCGGCAATGTTTTCAGGCGAGCATCT
CCCCCTTTTCTACCTATCTTACTTTTATAGTATTTACTCCCTCTTGTTGA
TCTATTGCTATCTGTGTTGCGTTGCTCTAGTTTTCGTACCCGTGATATCC
CTTGCAGCCTTATATTGCCTTGGCCACATCCTATTACCTGTTGCTTGGTA
GATAGCTGGACGTGCGCGTCGTAGTCGCTTGCTCAAGTGTTGTTGCGTGT
CGTCAAGTGCCACAATTGTTGGTGTATTGCCGCATGTTGATGTTGGAGAT
GATCTTGGCTTTACTTATCGTTCACTTTAATTCCTGTTTAACAACTAAAA
TTGAAGTAGGTAAGCAGAGGCACAGGTGGGCAATAGATGTTATTTGGTTG
TTAACCGTCCACTTGTGTACCGTAGGACCCCGAGTGCTTGATACCTGTTC
CTTGATTTATCGCGCTATCCACATTCGGGAGGATTATGGGACCCCCATGA
GCCAGAGCTTGATTCATTCTTATTTCTTGGGGCCACAACTAGTTTGAGGT
TTTATTACTATCCTGTACTTATCCCATGCTACTGCTTTATTTACGATTGT
GCGAGGAGCACACTGTACTGTTTAGGATCGTGGCACGATTCCGCGGTATC
GACAAGCCCAGTTTTGGGTTCCCAGTCGTTTACAGCCGTCCCCACAACCT
TGAGTCCGTCTCGGAGCCGGCCGGCTTCGTTGCGGGTCTACTTTAAGGGG
TGGCCCCCTGAAATATTTCTGAATCCTGTGATTGCTTTGTCGTGAAGGCC
TCGTTGGGTTTTGATTTGGTTTTTCCGAGGTTGATCGAGTGTGTGTTGCT
ATTGGTGCACCCCGGCCGGGTAAAACTTTCTGAAAGCCGTGTCCGCGGTT
ATGGACGACTTGGAGCACAGTATCTCGATCATAGACAACTATAACTAAAG
TAGTGCGATAAATTTGACTTTATAATGACTAGTAATCAGCTTCACTATAA
TGGAATGGCTAAATAAAATTGCCAACAATTGCTTGCTGGGTTGTCGTTTG
CGACCATTGTACCTGACTAGTAAATATTGTAACTACAACGGAATGGCTAA
ATAAAAGTACCAACAACTGCTGGGTTTTTGGGTTATCTCATGCTATTTGT
ATCTGATTAGTAAGTGTTGCAACTATAACGGAATGGTTAACTAAAATTGC
CCACTGCTTATTATATCAGGATGACTATCTATACCTGACTAGTAATTGCT
GCAACGATAACTGAATAAATAAAACTGCCAACGGTGTGAGTTCCTCGGTT
GACTTCCTCGTTTGGTCTCGAGGGGGAAACACCAGGATGGGTTTGTCTGA
TGGTAGGATCAGGTTGGTTCCGAATAGGTCTTTCTTACCCCTCTCTGATT
GCCGCTAGTTGTATCGAGTCTCTATAGGTTGTTTAGTGCTTGTTGCACTG
CCGCTCAGTCCACCATACCTATGTAGGCGAGGACCGCCGAATTCTAGCAT
TGCCGTGTACTGGCCACAGTACTGACGCTCCTCTTTTTCCTTTGCCCTTT
GTCGGCACCCCTTTTATTTAAGCAGGTTTTGAGATCGACGTCGTTAGCAG
GGTTACCCTTCCGGCTTGGCCTGGGCAGGGTTATGGACGCCATTGGTTAT
TCTTCAGGGCTCTTAGCCCCATTTGTCTCTTGTCCGTAGCTGGACGCTCT
ATCGTTTTCAAGGTGATTTGGATCTTTGTACTGTATATCCGTATTTTGAC
TCATGGAGTCGTGTTGTATATATCTGTTCTGTGGGTCCCATCGAGGACTA
TTGTGTAATGTTATTACTTCGTTTTCCACCCACACGAAAGTGCCTGGTGG
GCACCTTTGAATCGTTTCTATGCGGGTTTGGCGAGTTTCGCTAAAACTTG
CATAGGGCCAATTCTGAGGGTGTTACAGAGTGGTATCAGAGCTCAGCAGT
TGCGATACCCCACAAATCCAGCATGTAGGATAACCTAGCTAACGGCCGAA
GTAGAGTGTCAAAACTATTTTTGAAAAATCGGTTGGATAGTTCTGATTAG
GTCTGCTTTTACTCCTTAACCCTCTGCTACTCTCCTCTCACCTCTGCGCG
TTTTGAATCCGCCCTCTTCTCTCTCTTCGAGTCCAGGATTTCTCGTGGTT
GGGTTCCGTCGTACCTTCATGGTTTCACTTCCTCCTGTGATAACGGTGTT
TCTACATCCGGTCTTCAGGCTATCTGAGTGGTCCTTTATCTGTGGCACCA
TCCTTTGTTCCTTGTTTGTGCCTTCCGGTGTTTTCCGACGCGACGACATC
ATCTACGCCAGATCCGCTGCAAAGTCTACATCACTCCTTTGTTCTTGAAC
CTCGATTGTCGAGATCTTCAGTCTGATTCCAAGAATGGTTGCACGCTTTT
CCACTGATTGTGCGGAGTAATAGTTTGGGTGCGTGATGGATTGGCCCCCA
TGCCGACTACCCCTTCTATTCGCTTTTGTACATTGAAGTGGATGAGAATG
CATCGGTTCTCTCTTTCTATTGAAGTTAAAGGTGGCTTTATTCGGTGAAA
CCTCTACCTTCGACCTTTTGTTCCCGGAGTGTTCTCTCGACGATCACGGA
CAACGACCTCTTGTTAGTGGTGTCGCGAGGATCTACACGAAGCGAGAAGA
CGCAGATCGCCGACCTTCTTTCCGGTACCATGAGGCGGATCTCGAGGGCG
AGATCCATTGTTAGTGGTGTCGAATTGTGGCATCCCGCAAAACCACTACT
AGAAAATCGCGTTGTTTTTGTGCATTGCATCGCCATCATCATGCATTGTT
TGTCTGAACTATTTCGAAAAACCTAGTTTTGCTTTGTACAAATACCCCTC
TTTATTTCAAAGGCAAAACCCCGATCGTATCGGATATTTTTATTTCCCTA
AAAACTAATTGCAAGTGGCCTTGTTTTAAAATAAACAAAACCAAACAAAC
ACATATTTACAAAACCTAAACTCTAAATCCTAGTCCCACCAAATCCTATC
CTACCCACCAACCGCAGCATGCCACCTCACCCCTCCCCCATTTTCCTACC
CACCCTGCCACCTCATCAATCCACCCTCTTCCCCCACGCCTTCTCTCACC
ACAGCCCTATCTACCCTCCCTCTCTCTCTCCCCACCGACAACCGGGCCCC
ACCCGGCCACACTCTCCACTCAACCTTCCACCCCACTCAGCCACCTCTCT
CCCTGCCCTGTGGGTCCCGCCTCCCCTGGCCACGCGCACCCCACACACTC
CCCACGCGGTCACGCCGCGGCCCACCCGCGCACCCCACGCGCCCGACCCC
ACTCCCCCTGGCCCACCTCCTTCTCCTCTCTCCTTCCTCCCCGCTCGCCC
CCGACACCTCCTCTCCATCCCTTCTCTCCTTCTCCCGTGCGCTGGCCAAC
CGCCTCCGGCCACCGCCCCTCCTCCCCTTCCCTCTCTGCTCCGCCACCGC
CCTCCGCTCGCCCCGTCGCCGGCCCTCCTCCAGCAGAGCCCCGGCCGCGC
CGCCGCGGGACCCTGCCCGCCGCCGCCGCGTCCTCCGTCGAGCCGACGCG
CTCCGGCCGCGACCGCGCCCCCTTGCCTGGCCGCCCCCTCTCGCCCGCGC
GGACCTCCTCCGGCCGAGCTCGCCCCGAGCGCACCCTCTGCCGGCGTCCT
CCTCTGCCGCCCCTCGCCAGCGACCTCCGACGCCACCACCCGCCTCCACC
GTCGCCGGGCCCGTCCTCCAGCGCCGCCACCGCCCTGCTCCTCCTCGCCT
CGCCGCCCGACGCTGCGCTCGCCGCAACCCCTGCGAGCAGAGCCCCCCGC
GTGCCACCTCCCTCGCCCCGCCGGCCCCGAGCCCTCCTCCTCCGGCCGTC
GCCCCGGAGCCGGCGCCGCCGCGTGCTCCCGCCACCGCCGGCCTCTGCTT
GACTCGCCGGCCAGGCGCACCCCCCCCCGCTCGGCCTCTTCTCCAACCGC
GGCGACCCCCCTCTGCCAGCTCGCCCGCCTCCGACGACCTCACCCTCCAC
CGCGGGGCCCGGCCCGGCCCTCTTCTGCAGCAGCTTCCGCGGGCCCCGCA
AGCCGCAGACGCTCGCCGCGCCCCTCCTGCGACCCAGGCTCCGCGCGCCG
CCGCCCTCGAGGCCAGCTCGTCCCCGACCCCGTCTGCGAGATGGCCGCCT
ACAACCGTCATCCGACCTCCAGCTCGTCTCGACGCCCTCCTGCGACCAAG
ACCTCTGCACCAAGCCGGTAGCACGCCCGCAGAATGTTCGCCCGTGTGAC
CCAAACAGGCCCGCTTTGCTGACTCGTCCAGTCGCCCGAGAATGATGACA
AGAACCCGTCAACAAACATCGCCGCTTCCGGTGAACCACCGGCGCCGAAC
CCGACACCGGCAAATAAAGTTGAAACCGCCAAGATCTTCAATCGGATCCG
AGGACACCGAGACCCCGGTGCGACAAGTACTCCTTCCCGGACCCGAACCC
CGGTACCGGACAAGTTCGCCATCGACCTCGAGAACGCCTACACGGGACAA
CAAGACCGCCACACGGACGCGAACCCCAAGACCCTGAGGCCCCGAACCGA
AGACCGATCCGAAGCGCCAAGACCTCCGACAGGGAACCGACCAGTTCGCC
GAGAACCGCACCCGAACCTGAAGCACGACAAGATCTGCCCCGTTGTTCGA
GAATGTTCCTGCCGAGACCGCTTCCGTCGAACCCTGAGACCGGACCCTGA
ACCCTCGGAACCCCAAGATCGCCAAACCTCCATGTGTGACCCCTTTTCTC
GAGCCCTATTTTATAAATGTAATAACAAATTGTTGCATATTAAATTGTCA
TGTTCATGCATGCATCCTTGTCTGTGGTTTGGGGGCCTTATGCCGATTCA
CTGCATAATTAAATAGGGGGCCCATATGCGGGCAAATCTAGTCTCATATT
GGCCTCATTTAAATTTGTGCATCGAACCGTTGTCATATCTTGCCTTGTTA
AAACAACATTTAAAATGCAGGGTAGCTAAACAACTTGAACCACTTGAATA
TTGTCGGGACCCCGGTTCCGCTTAATATTGCCTAATTGCATCGCATCTTG
CCATGTCATGCATCATACATGCATCATGCCCGATTTTCTACCGTAGTATT
AAATAGTGCATCCGGTGTTTATTCTAGTGTTTTGGTTCTTCGCGGATAAG
GCCGTTGAGTTAATGCGAGTGTCGACCCGATCTTCGGTTGAACCTTCGGC
AATGTTTTTAGGCGAGCATCTCCCCCTTTTCTACCTATCTTACTTTTATA
GTATTTACTCCCTCCTGTTGATCTATTGCTATCTGTGTTGCGTTGCTCTA
GTTTTCGTACCCGTGATATCCCTTGCAGCCTTATATTGCCTTGGCCACAT
CCTATTACCTGTTGCTTGGTAGATAGCTGGACGTGCGCGTCGTAGTCGCT
TGCTCAAGTGCTGTTGCGTGTCGTCAAGTGCCACAGTTGTTGGTGTATTG
CCGCATGTTGATGTTGGAGATGATCTTGGCTTTACTTATCGTTCACTTTA
ATTCCTGTTTAACAACTAAAATTGAAGTAGGTAAGCAGAGGCACAGGTGG
GCAATAGATGTTATTTGGTTGTTAACCGTCCACTTGTGTACCGTAGGACC
CCGAGTGCTTGATACTTGTTCCTTGATTTATCGCGCTATCCACATTCGGG
AGGATTATGGGATCCCCCTGAGCCAGAGCTTGATTCATTCTTATTTCTTG
GGGCCACAACTAGTTTAAGGTTTTACTACTATCATGTACTTATGCCATGC
TACTGCTTTATTTACGATTGTGCGAGGAGCACACTGTACTGTTTAGGATC
GTGGCACGATTCCGCGGTATCGACAAGCCCAGTTTTGGGTTCCCAGTCGT
TTACAGCCGTCCCCACAACCTTGAGTCCGTCTCGGAGCCGGCCGGCTTCG
TTGCGGGTCTACTTTAAGGGGTGGCCCCCTGAAATATTTCTGAATCCTGT
GATTGCTTTGTCGTGAAGGCCTCGTTGGGTTTTGATTTGGTTTTTCCGAG
GTTGATCGAGTGTGTGTTGCTATTGGTGCACCCCGGCCGGGTAAAACTTT
CTGAAAGTCGTGTCCGCGGTTATCGACGACTTGGAGCACAATATCTCGAT
CATAGACAACTATAACTAAAGTAGTGCGATAAATTTGACTTTATAATGAC
TAGTAATCAGCTTCACTATAATGGAATGGCTAAATAAAATTGCCAACAAT
TGCTTGCTGGGTTGTCGTTTGCGACTATTGTACCTGACTAGTAAATATTG
TAACTACAACGGAATGGCTAAATAAAAGTACCAACAACTGCTGGGTTTTT
GGGTTATCTCATGCTATTTGTATCTGATTAGTAAGTGTTGCAACTATAAC
GGAATGGTTACCTAAATTTCCCACTGCTTATTATATCAGGATGACTATCT
ATACCTGACTAGTAATTGCTGCAACGATAACTGAATAAATAAAACTGCCA
ACGGTGTGAGTTCCTCGGTTGACTTCCTCGTTTGGTCTCGAGGGGGAAAC
ACTAGGATGGGTTTGTCTGATGGTAGGATCAGGTTGGTTCCGAATAGGTC
TTTCTTACCCCTCTCTGATTGCCGCTAGTTGTATCGAGTCTCTATAGGTT
GTTTAGTGCTTGCTGCACTGCCGCTCAGTCCACCATACCTATGTAGGCGA
GGACCGCCGAATTCTAGCCTCGCCGTGTACTGGCCACAGTACTGACGCTC
CTCTTTTTCCTTTGCCCTTTGTCGGCACCCCTTTTGTTTAAGCAGGTTTT
GAGATCGACGTCGTTAGCAGGGTTACCCTTCCGGCTTGGCCTGGGCAGGG
TTATGGACGCCATTGGTTATTCTTCAGGGCTCTTAGCCCCATTTGTCTCT
TGTCCGTAGCTGGACGCTCTATCGTTTTCAAGGTGATTTGGATCTTTGTA
CTGTATATCTGTATTTTGACTCATGGAGTCGTGTTGTATATATCTGTTCT
GTGGGTCCCATCGAGGACTATTGTGTAATGTTATTACTTCGTTTTCCACC
CGCACGAAAGTGCCTGGTGGGCACCTTTGAATCGTTTCTATGCGGGTTTG
GCGAGTTTGGCTAAAACTTGCATAGGGCCGATTCTGAGGGTGTTACAGGT
GGTGCGTGCCCGCTGCCGGCTGCTGGGCGGCTTGCTCGACAGATTCCATG
GCTGGTCGACGTGTGCGTGCGTGCGCGCGAGCAAGCCCAAGGTGGGGCTG
TGCTTCAGACACATATGTCTTTGAGGCCTCTTGGGATCTGGGGCAAGTGG
CGGCATAGATTTTTCTTGGTGTGGAGCTGATTTTGTGGAGATCGTGTGGA
TTAGAGGATAGGATCATGTGGTTAGCTTAAGAATTTAAAGAGAAGGCCAC
GATGAAATCTGGTGCTCATTTACAAATGGGTGAAATCTGCTGGCTCCAGG
AGGAAAACGGCGACGAAGAGGATTTTGGACAAAAGAGTGGGAATTCTTCT
CGGATCTAGATCTAGAAGAAGGCAGATATTTTTGGAGAAAGTAGGTGGGG
GAATTTTAGATGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.