Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA036697

[Submit comment/correction]

Sequence	AA036697
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA036697
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATCCAACCTAAAAAAACCCGGAAAGTCCCGTGCTGATCATGCCACTTGAC CCAGGACTGCAGCTCTCTTAGCAACAGGGGATTCCTGCCGGTCCATGGAC ATGAGGGTCGACTCGGCGATCCTCGCCGTCGTCGTCGCCTTCCTCCTCCC CCTCCGTCTGCTCTCCCTCGTCGCCCGCCTGAACTCCTCCGGTAGCGCTG GCGACCTCCGCCGATCCTGCACCGCCTTAACCATCGCGGCCGCGCTCCTG GCCGCCATCTTCGCCCTTCCGCGAGACCACGTCGGTGGGGCGGGGCACTG CGGCGCCTCCGTTTCCGACGCTGGGGAGGATGGTATGGGCCGGGAGTTTC GCCTGGAGATCGAACAGTTGAAGCTCCAGCTCAACCGATTGGGTACGTCA GAGATTAGCGACTCACTCTCCAGCACCAATTGTTCTTGTGTTACTATTGT GGAAATATGTGGTTGATACCTGCCCAGTTGTGATTTGCGATTGAATTATC ATGGGGATTTCTTGGTACACGAACTCTTCTGCTTGTGCCTTAAGAAGATT ATTATGGTTTTTGGATTTTTTAGGAAAGAATTGTGCATGCAGAATCATTC CAGGAGATCAATTCAAAAGCATCGGATGACAAAGGTCGTGTTTCAGAGGA AGATGGCGAGGTTGTGAAAGCGGTGGGCCTGGAAATTCAGGCTCTGATCA AGGAGCAAGAAAACATCAAGGTATGCATCTGGCGATTGGTAAATTAGGGT GAACAAAGTGAGAGATAGCGATAGAGTATATATATATAAAGGTAGTGGTG GATGTGAAATTTTAGCGCTACAGTTAGTTTGACATTTTTTTATTGAACCA TAGGCCATGCTGGTGAAAATGCATACAGAATGGGAGAACAATTCAAAAGC ATCGAATGACAAAGGTCATGTTTCAGAGGAAGATGTCGAGGTTGTGAAAG CAATGGGACTGAACATTCAGGTTCTGATCAAGGAACAAGAAAACATCAAG GTATGTGTTTGGCGATTGGTAAATTAGGGTGAACACAGTGAGAGAGATAG TAAAAGAGTATGTCATAAAGGGAGTAGTGGATGAGAAATCTGAGCAACTC CAGTTAGTTTGACATTTTTTATAGAACCATAGGCTATACTAGTGAAAAGA GTATTGTGTGTTTGGTTTTGAGCCTCACTTAGCCTAGCCAAAATTTTGGC GTGCATGAAGAAGGGCAGGACCAAAATTTTGTTAAGTCGTTGTTTGGAAC TTTCGATTATAGCTGTTATCATTTCCAAAAATTTGCCAAAATAGGCCTCC ATTTGGTATCCAACCAAACTGATTTGACTTACATTTGACAACTTACATTG GCTCGTGCTTGATTTGGTTCCAATTCGGCCAATTTTTTTTTTTAGAATGA TATGGCTAAGATGGTTTGGACCTCTGCTCACTGGTGATTTTTATATTAGT GGTAGATGATGGTTCTTTGGCCTTGAGTCCTTGATACATCTAGATCTTTC AAACTGAAACTGTCTGTGTCCATAATGTTAGTGGAAAATCTTGCTTCCCG AATATTTGGCACCATTTGATTGAACCTTAAAACAACCTTCATATGTGCTA GAATGCACACTGTCCTCTTCTCGTTTCACTCTTATTGGACATTTACATTC CATAGCGAACTGTACAAGTGCGCCAAGCTTATCAGTATTGTGCATGCTTG CAGTGGTCTGTCCTTGGTCTCACACCAGCACTAATGATGCTTAATTAGGA ACCGATGGGGCTAAGAAGGAGCAGCAGAGCATTCCTTTTTTGTTCATCTA TCTCCATAATGCAAAATAATTGACTTAGTACTAGGTCATCTGATTAGGAT TATACACGTCACTTCACCAGAAAATAATACATATATATAGACACACAGAC ACAACTTTACATTGTCATTTACAAGGAGAGAGGGGATTAAACCCCCAAGG CCCAAAATTAGATTGGACGCTTTGTAATTTTTGTCAGAATAATCCATCAC TTAATATCATGCATTGACTTTTGTGCCTTTATATGTTGTAGGAATTATTA TGGAGTTCTGACAGTAATATCAAGTCAGTCACAAATGAGGTTCCTTTCTC TCTCCCTCCTTAATTTCCCCACTTATGTACAGGGTCAGCTTTAGAAATAT TGTCTCAGTCATCAGTAAATTTCTTTTGGGATACAAAAAGTTCACAATGT AATTAAATGATGTGCCTAGGTCGTTGACCAACAGTGAGTAGTACGGAATG TTAAATTAAATTTTGATCTTATTTGTATTTTACCTTCTAATTCGATGCTA GTTGCATAAATTACCATCGTTTGCAAATCTATGCATATAATAACTGTGTT CTACTAAATTTGTGCTTCGAGGTTATTAGTTTGATTCGACATGACCATGG AGTAACATGTGTGACACTATACCACCTTGGAAGCAAGGCGGCATCGATTT TTATTAGCTGGCGTGATGTCGAGTGGTAGGGTGAATAACTCCACTAGGAA TGCATCGTCGGTGATGTCGAGAGCTCAGCAGGCGTGTGTGTTATTGACAT GGTCCGTGTTGGCCAGCGTCACAGTCACTTAAACTATTCATCACAATTTA ATCAGATGCCTTGCTCACTACGAGCTTCCATTTCCGACAATATAAGGCTA GGTCGAGGTCGAGCTACCGGCAGAGATGCACGTGTATGGATACCCTGTAA TCTGGATACACAGTTGCAAGAGAAGTGTTGAACCTCTTGTTGTATATCGG TACTTGAGCGAGATGAGTTCGCCTAAAGCGTTGTTGTGTGTCTCGGCAGA ACTGAGTGTTGGTCGATTCTGTGAACTAGCGGCACATCAGAGGGACCTTG ACTGTCTTGAATTACCAGCATAGTTGTGCGTTGCCCATCTGGTGGAAAGA GGAGATGTGAGCTTTTGTTTATGATGCCCCCTGATGTGTCTTGATGAACT GGTCAAATCGGTTGAGGCAGACAAACGAATCCACATTACTGTAGTATGTG GGCTAAATCCATCTTGAAGTGGGAGAGATGGTCTTCTGTTGCCTTGGGTG GCCGTGCAGGGAGTGGGATCACCATTGGTGCAGCTTGACCGTCGACCCTG ATGCTTGTCTCTGGCAGCACCCATTTTTCTAGCTCTGCCATGACCAAGCA TGCCCTTGGATTTGCACTCTGCTCCTTGGTATCATGCAGGTTGCCGGTGA TGTTGTCCAGATCCTTGTCTGTGGTCACGAACTTCTGGTTGAACCTGTTA AGATGCTTCATGATCGCAAGTGGGGTGGTGTTGATGTTCTTAATGACCTC AGATGGGCTACCATGATGAAGGTCTATTGCTGATACCGCAATTTCAGGTG GTGGATGATAATCAGGGTGATGGAGATGGTCCTGGACCTTTGCAGGACAA CACTCAGCTAAGATGGCTGCTACACCACGATTGCCTGACTAGGAATTGGG GGAGGATAATTGGGATATTTTTCTTGATTGAAGATAAACCAGGGTAGGCA TTATCGCATTTTTGATAGAATTCATGAAGTGCAGGTCTCGGCAAACTGAA CATACCTGGAAATAACTCTTTCTTGGAAGTCAAGTCTACCTCGAATAGAT GTAATCTTGCCTAATTTCGAAATATGGGGGTATATATCCCTTGATTGCAG CAACATGCAGTTGCTATGATGGTTTGTTTAGTGTTTGTTCACTCCAATAT TGGCTACTTCTATTGCCCTGTTATTTATTTAAACGGAAACAAACCATTTG GATTGTTGGAATATCACAGTTTTTTTTTCAAGAAACCACAAACCTCTTAG AATTCCAACGAAAAAAAATCCATTTCAAAAATGCCTGGATGCGACTTAGT TTCAAGTTCTTCTATATATCCATTCTTACTTTGTGTGCATTTGAGAGTTC TTTTTTAAATCTCTCTAGAGGTGTTCATATTCTGGGTATGATGATAATAG GTTCTAATTCTGGCGGCGGAATCAAGAAAGATGAACTCTGATGTTTACAA TATATGGTCACTGGCCAACGATACAGAGAAAACCGTTGAAGCTCTACATT CAGATGTCAAAAAGGTATCTACTTAGTTATCTCAGTTATGATAATCTTTA CTTGGCAGTCACAATTCATTTCACTTCTTTAACTATTCATTTCTGCCTAT GATTTATTAGAATCGTATCTTATAGTTATTCTTAAATCTGGATATACTTT TCTGTTTAAAAGAACTGGTCTGTCTTTCAAACATTAGTACATACGAATGT CAGACCATTGTGCTCTCTTATTTAGTGAAGTTCAAATGTTTGACAGTATT GTAGTGATTAGTGAATGCTCTAATCCCCAACCTCATGTTTTATTTCGAAA GTTTATCATGATGATTTGACGATGTGAAAAGAAGCATATGCAGTCCCTGT TCCTGAAAGTTCATTTCTTGGGACAAACAAACTGTCATAGAGGTTGCACG TGTACCTTTTTAGTTATATGCCTTTCCTTCTTCTGGGAAGCAAACAATTT TTTAGTTGCAGGTTCTCCTTTTTTGATGCTTACTAGCTGAATGCCCGTGC TTTGCTACGGTTTATTAATTTTGTTGAAAAGGTTAAAATTTCCTCTTTGT GCCCATGACAATTCAGTAAATCAAAGCTGCAAAACTGTCACACCGTAGAA AAATCCATGATAGTTATATAGTCAAGGATGAAAAAAAAGAGTTTCAAACT TGGATAAACATGTAGAGCATTCCTTCGATCTAAAAAGACTCCATACATCT TGCATCAACATATTACAAGAGTCCTTTGATCTATGAAGTCTACTTAAGCA GCTCAGCATAAGGAAATAATAGCAACTTCAGCAAATTGCAAGAGTTTAAA AGGATTTGGTAGTCCCAAGCATGTAGTAAACAGTGGTGGTGTGGTGGCAG TAGTAGCAGCTGATACTATTTGATCAACCAGTGGACAAGCAGGCTTCAAC AGAGAAGTACATTCAGATCGTCATTCTTATTTCTCAATAAGAAAAATCAT GTCTCGTTTATGTATCAGTGACCAGTGTCCTTTTCGAGGCATCAACACAA ACACCACAGATCTTGTGTGATGATTGGTGAATGTGCCCCAAATGCCTTCA ACATGTATACAGAAGCAAAAAAAAGGCAACTTTAATTGAATAAATCTAAC TCGAACTGGCAGTTCCAAAAACAAGTCGAATTTGAAATTTATTTATCATC ACAAAATGGAAGAGGAAAAGAACGCAGTGCTACATCAGACTCGAAAAAAT TACAAATTGATAAGGCTAGCTGTACCAATGTCCATTATTTTCCTCTCTCT TTCCTTTATATTCTCCATCTTGACTGAAAATTGTCTGCACTGCACGCGGG TTCCCCCATAAGCATATGATTTCAACTATAGAGAAAAAATAGCAAGTACA GAACAGTAAACATGTTTTGAACTTCAGATAAACATACAAACATGCAGTAC ATGTTCTGCACTTCAGATCCAATCAATACAGGAAAAGAATTGAAGCAATA TTGCTGGCTACTGCCGATGAGCACGGTTGAAAGATCATGCTGGACGAGTA GTAGCTTTACCATGCAACCGGCCAAAGGCCTTCAATAGTAGCACAACATG GACACATACACGAGCAGCTGTTGTGCACTGGAGCTCCAAAAAAGGGCAGA TCCCTGTCCAATACAATTGCGCCATTGCTCTGTTTCTATGGGCCTCAACC GGTGAATACCAGCTGAGTTTCGGGATCACGGCAGAGAAGCCCGTGGCTAG TATGCAGAGGGAAAACTTTGCTGCAGCTGGACGGGCCTCGACCAGAAGCC ACGGATACGGAGGCCGGTAAGCCTGTGCCCGACACCCTCGAGTTTGTGCA GCGCAACAGGCATACCCGCATATATTTATAGCCGTAGCCACAATTCTTGT ACAGTTCGAGATGCTTGTTTCTCATCGTCCTCCGCCATGAAAAGGAACAT GACGACGTCGCACGCCATGTCTTCGTTGATGCGGTGATGCAGGAGACGGC CAGTCGGAGTGCGATACTTCTCGTCCCACTTCAGCAGTCAGATGTACCGG CACCGCACGAGCAACTCCAGATAGTTGGCTTGGCCAAGTGAACCTGGTAC TATTCCTTTACTCCCTTATACCTCTCAAAAAGTAACATCACTCACTATTA CAACTCACCGCTAGGAACCCAATCCCGTCATCTACTAACACCATGGACAA ACAAGCAATCCATCCCCATCAAGACGCATCACGTTCTACTCGTACCAACC ATCATTCAGATTCTACTCGTACAACAACACCTACGTACCTATTACCTACG GTGATGAACAACTGCCTATGAAACCTTAGACGAGAAAATGAACAGAGAAC AGGGTGTACCTTAGGTTGAGCATAGGCAGTTAGAGTTCCGGAGAAGTGGG CTGAACAGCGAGTACTCACCGAAGGAGCAGCGTGGTCGGATTTCCAGCAA AGTCGAATGAACGGCAAGACACAAGTGTCCACGGACGGCGAAGTCTGCAG AACAGGGAGACGACGCTGTCGAGAACAAACAGCAAAGTCACTGTGTAACA ACTTTTGTCAGGATATCATGGACTAATAAGAAGTACCATATATATCACCG GCTAATCAGTTCATCACAGTTCAGGTTTATACCATTGTTTGATTCCTACA ATTCTCATGCAATAGGAATGTCACAATGAGAACAAAATTTCAGATAAAAT ATACATCTGATGATGAAAAAGAATTCAATAAGTTTTTGTGAGATTATGTG AGTTTTAACAAGCTGAAGCAGTATTACGGTAGCTAAACTTATGTGGTCTA CAAACAACAGTGCACAGTGACAATCTTAGTATTACCAAGAGGAATTCTTC AAGTGGTTTGCATAATAGAGCTAGTTAAGAAATAAGCTGGCCTCCCACGC AGAATCCACATGGGTGTCATACTTGCACAAGAGAGAAATCGACAGCCGTC GTCACTGATTCATCTAGGCGCAGTTCACAATGTACACTGCCGAAAAGCAG GCCAGTCAATTTAAGATTTAGTTCAAATGGTGCAGTCAGCAAGGAAAAGA AGAATGATACAAAACCTTATGATCAGAGATGTGGCTTCTCATGCTACGAA AGCTCTTGAACAAGCCCCTAAAATCCTGCAGACTGCCAAAATCTAGCAGT CAAGTCCATATACATGACCAGCACCAACTACAGGTAGCTAAGGAGTCAAT TGCTACAACCTTAATCTATTAAATTTACCTGAAATCCATGGCATCAGAAC CAATATGGGAACGAATAATCTGTGTTCGGGAGGGGCTCCACTCCACCTAC AAACTCCACATCAGAACCGATATGCAGAGCAACAAACCAGTACATGTATT AGAAGTTGTATTTTCTGCAAGTCATCTCAAAGCGAACTGCAATCTACTAC AACCTTAAAAAATCTACTTCAAAATAGGTCTAATTTGTTCCAAACATGCA ATCAACCTATTAAGTCAAGTTTGGACATCACGAGCACTAATATAGAGATG AATTGAAACCCCAAGCAAGGCAAGCACAATAAAGTTCTTAGACAATGGTG GTGTGGATTCAACTGTTACCTTGTTGCTGGACTAATAGTGCAAGAACTGC AGGAGTTTATGGGCTAAAATTGGCAGTAAATGATACATGTCTACGTACAC AATGGAGAAAATTTTCAATTACATTGGCATCACACATACAATGATCAATT CCATTACAGATAAAATCAGAGAGAGGGGTCATTGGAGAGAGCTACCTTGA GGAGGAGTACGGCAGCGATGGTTGGCGCCTGATGGGAAACTGCAGGGGGA GGTCCACATGAAAAACCATTGGTATCTTCTGATTTTCAACCTCATCCGGC CTTAACACACCTACTCCAGATTGCAGGTCTCTGTAAAGAGTAGTAATTGC TAGTACTGATACATCAGATTGAAATAGGAAAAAGGAAAAACTACAAAGGC AGAAGCCATGCATAAACTGAACAATTTTATAGCTCTGAACAATGGGTGTT CACTGTTCAGGAGTGACTCCAAATACAGACGTCACTGTCTCTCCTACCTA TCCCATTATGAATGTGTCCCTACTCCGCCACGGCGTGAGTCCCTAGCCTC GATGGCGACGCCGTGGCCCCATGGTCGTCTACCCTCTCCTCTGCCACCTC CATAGCTTCGGCGGCGCCTCGACGGCCGTCGTCCCACTCGTCTGTCGCGG TCCTCCCTCTCATGCGCAACAGGCGTCTTGCCTTCAGCATCTCTGTGACT ACGTATGATTGATTGCAATCTAATAGTAGAGACTATAGTTTTGACCGCTC GAGAAATTAGAATCAAACGGAGATGAGGGACTGCTGCAGTAGGTCGGGGA GGAACTGTAGGAGGAGGGCGGCGGCTGGGCGGAGGGGGGGCGCCTAGGCA GGGGAGAGATGGGAGGGGTGGCGGCTGGACCCTAGGATAGGTCGGGACGG GCGTTCTGAAGGGGCATTTTCCACTAATCGGTGGCAACAAGGTGTAATTA ACAAATCCAAGTATTGTGAAGACTCGTTTTACCATTGGATGTAGATCAAA CGCTCCCGATTATTTCAATGTTTGATGTCAAAGTGTTTGATGACGACCTA CGATCACCAACTCCCTTTTAATAGTAAAGAAGTTCTGTGTGTGCGAGTTT GTTGGGAAAGCTGTCTGACTAGTCATCTCATGGGCGGATAACAGGTTCAA GTTCTAACAGATGAATCAAGAAAGTTGGGTTCTAGTATTCGCCAGGTATG GTCATTGGCAAAGGATACTGGAAAGAAGGTCGAAGCTCTGTATGCAGATA TAGAAAAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.