Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA009721

[Submit comment/correction]

Sequence	AA009721
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA009721
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGCATCAACAAACCAACGAGCAAACCAGCACCCATCACAGACACAGGAT GCACCTAGCGGGGAAGACCACGGCGGTACATGCCCGGTCAGTCAGCCTGC CACACGAGCATTCGCATCCCGTGCTGGCCTACCTCGACGACAGCATCCGC ACGCTCAGGTCATGGTCGGCCGGAGCTTCCGGTCAGGCCTCCGGCATCGC CCTCGTCGATGCCGTCCTGGCAGCACTCGGCGAACTCCTGGAGCTGCCGC AGGCTGTGGCATCCCTCCATAACGCGGCTTCCTGTGACCAAATCCTCGAA GGGTTCCTTGCCCTCGCTGACGCCTACGGCACGTTCCAATCGGCGCTCAT CACCCTGAAGCAAAGCGTCGCGGACCTGCAGGTCGGCACTAGGCGCGGGG ACGGCGTGATGGTCACTGCAGCGCTCCATGCACACAGACGAACAGAAAAG GAATTGTCCCACCTCGTTGCCACAATGCGACATGCCACCAAATGCACTCT TGCGACGTCGAGGGCTCGAGACAACGACGTGATTGGAATTGTGGCAAAGG TGGCTGCCGCCACTGCGGAAGCGTCGGAGGCCATCTTCATGGAGTATGCA GCAATGTTACCGGAACTCGTGCCCACAATAGCCCATACTTCAAACAAGTG GCTGGCCAGGCTGAGCATCAGGCACGACGCCAGGAAGACAGCACTGGCGG AACTGGAGAGGTTGGAGAAGCTAGAGGAATGCATCGATGGGCTGGAGGCT GGGAGCGAGAAGGTTTTCAGAAAACTGCTGCAGTCTAGAGTTTCACTTCT GAACATCAACAACCCCTTCTAACTCAGTGTTGATTCTGTATAGCAGTACT ACTGTACTAGTACTAGGTTTTAGATGAGGAAACAACTCACGGAAGAATGT ACTAGCAGCATGTGTTGGATAACCATGACACAGCATATATTGTTTCTGTT CTTCTTAGTATCTGATTATTGCACATAATCAATACCCTTCATGTCAAATT AAACTTGAGCTACCAAAGACTTGGAGTGATGGTAGAGGCTGTTTCATCTT AGCAGCGTAACCAGATCACATCCAAACATTGGTAATAGTTTGGCCACAGT CCAAATTCACAAGTTAAATTGTAGATAATGAACTACTAGACTGACAACTG AAAATACTGCTAATTGTGCAAACCTGCAGGTTTCTTCTATCCAGGAAAAG CTGCAGTTTGTTCGTAGGCTCCATGGTAGTCCTCTCAAGAGAAACATAGA TATCATGATTCACATCCCTGATGAGCTCCTTAAGCTCTGAACTCTGCAGT AACAATGACGAACTCGTTCATTAGGTTCTGTACACCGGCTTCAGTTCAGA CCATCTCCACAGAAAACCAGTAGTCTATAACTATTCATAGAAGAGTCAAA TTCCTTACCCAAGGCTTTCCTCAGTCCTCACAAGTATTACTGTACATCTG TTTGATGACAACTTGCCATGTTAAGTACTACCTCCGTTTCAAAATATAAG ATGTTTTAGCAATAGCTTACTAAAACATCTTATATTTTGGAACGGAGCTA GTACTATAACTTAGACAGGAAGAAAGAATCATCAAGCTAGAGGGATAAGG GGAAGTAGATGCACACGAGGCCTTCTTTGAAGAACATGAAAATCTGGGAC CTAACAAGAATTAGATGAACCACTTTTCCTTAGTACAATATAGTATACTC TACTGGAGCAGCTGAAAGTATCACTACCGCAAGCACTAGCAATACAAAAG CCCTCCAACAAACGTAGTGGAGTATAGAATGAAAATACACGTACACCATA TAATGCAACTCAGGTGGCTAACAACTTAATCAGGACTTTTCAGTTTCAGA ATAACCCGGGAGAAACATGATGCGGATGTCAAAAACCCAAATAAATATCA TGCCAACAGCTTTCCTTACTTGCATCTATATAGTTACCCCATAACAATAC TGACCTAGGTATAATCTAAAATAATCCTAGGCCTAGGCTAGCATTTTGCA AACAACTGATGCCCCTCATTAGGCCTGAAAAATAAAGTCAACACGAGCAA GCAAGCAAGCCCACACAACTGAGGAAAATAGCATCACTTGAATAAAACCT ACCAAATTTAGTAGACACTATACGGGCCTTCCAAACTGTTTTCATCAGAA TAAAGATACATTCTGGTGAACTAAGTGCTACGGAACTTTTTCTATTTGCT TCTATGGTAAATTTCTGCAATACGGCTACATTCTTTGTGCAAAACGACAA GAGAATCACTTGAGCATGCTATAGCATCGAGCAAAGGAACTCTAATAGGT AGTACTAAATTGTTCTCAGTTATGTGCAACCAAAATATAAGCCACCTTTA AACATGAGGAAACATTATTTTCTGATTGAGATAGTGTCACGCAGTTCTGG TCACTACACCTTTTTTTGGCGCCTGGCACTACTACTACATTTTCTTTCTG GTCATTTTATTCCATTCTACAAGTATTACTGTTGCTGTGCCATTTAAGCT TTTGGCAGCATCTCTAATCATGCCGAGAACTCAAACAACATAGTGTGCTT ATACTTTGCGCCAGGCTGAACTACCACAGAGGGGAAATTGGGCTGGTTGA TGGCATCGGGGAACCCCTGGGTTTCCAAGCATACTCCGGCATGCTTCCCA TAAACAGCTCCACCTTTCCCGGTGATGCCATCCACATAGTTGGCGGTATA GAACTGCATGCCAGGCGCATCGGTCCAAAGGTCCAGCGTCCGTGAGCTCG ATGTGTCCTTCAGCTTGGCTGCGTGCTTCAGGCCATCCTTCTCATCGCCC GAGTCCAGCACATAGTTATGGTCGTACCCTCCAGGAACATCGTTGATGCG GTCCCCGATCTTGCGCTCTGTGGTGAAATCGAAGGGCGTGTCCTGGACAG GCATTATTTCTCCAGTGGGAATTGTGTTCTCATCAACTGGAGTGATGTGT TTTCCCCAGATCTGGATCGAATGATCCAAGATGTTGCCCGAGTTGTGGCC TGCAAGGTTCCAGTAAGTATGTTGTGCCAAGCTGATAGGGGTGGCTTTGT TAGCTGGTATAGCTTCCATGTCAAGTCTTAGAGTGGTGGCCTCAGGAAGA GAATAAATTGCTCGGATAGTTACATCACCAGGGTAACCTGAAAGGTATAA AACGATTCATGCTTGAATAGGCAGACTTATGCATGGGGATTTGGCAGTGG AAACAAAGATGTTAGTGACATTACCCTCTTCGCCATCTTTGCTGTCATAT TTAAAGGTGATTGATGGGTACTCGCCACCTTTACGCTCGACGACATCCCA CACAACCTTGTCAAACCCCTTCAATCCACCTGCAATTTACAAATTCAGCA ACAAGACACATTATGTCTTGCAGTTAAGTCACATGAACCCTACCAATTAT AATGCAATGATTTAAAGGTAGAGCATAAAATTTGTAGATTTCTTTTCCCA ACATGTCAAAATATTTAGACGATTGGTTCTTCTGTGGTACTATGATATTA AGAGTACATATATTGCAATCTGTTGGACGTTTCTATCTGTGGTACTGGGT ACTCAGTTGTGAACTTGCGATTATATCATCACATAATAATTTTTTCAAAT CACTAATATAATTAATAATTATGTTATGTTCCGTAACAACTGACTAGTCT AAAGAAGCCTCAGAGACGTATAGCTCCAGTGTCACATACAGATAAAGCAA AGTATACGCCTTGTCAAAACTAACCACGTGAAATTTATGAAACCATACCA TGAAGGCTATTCGGTCCATTGTTGATAGGCAATGAATACTCAACTCCATT CAGATCAAACTTCCCATTCTTGATCCTATTCGCAACTCGGCCAACTATGC AACCAAAATAAGGTGCCATGCCCTTCTATAAAACATAAAAGAAGAAAGAG AAAGTCTATGTTAGCAACCACAGGAAACCCTTTGAAACAAGTTAAAGGGA AATTTAACATAATCAGATAGATCCTTGATACTTCAAAATATCATATACAT ATGGTTAGTAGATACCTAAGATGAGTATCATCATTGGGCTTTGGAGTGTG GAATGACTAGCATCAACGTTTACACCCTCTTTGATTGTAGGATTAAGAAT CATAGGAATTTTTTCTCTGACAACTACGGCAGGCATCTAATCCTAAAAGG AAGGTTCTACGTTTTTCTGTGGTGCAATCAAATAAAAACTTCTATTGCTT GTGTTTCTGATTCCTACAAGACTTAACATGCCATGACATATTGCAGAGAG TTAAACTGAAATGTACAACCTACAGTATTTTCAAATAGAAGAACAGTTTA GATCTCAGACCTGACGACAAATCTAAGAATCTTGTATTTGAGGAACCGGC GACTTTTGGTATAAGGACAACAATGATTCAGAATCAAAACACTTATATCC ATATTAGGACAGCATTGACTTGCATCCAGTTTAACCAGAAATACATGTAC TCATTGACAGGGTGCAGAAAATTTCAGTGACATAAACTGAACAAATCTTG ATTTTTGATAGTTCTCATTGCCATAAAGCCTAAAACTGGACCAAAATCCA TAAATATCCCTTTCTCGAGAGGAATTCAGCTCACTCATAGCAACTCTATA TCAGGACACTTACACCTATATCAGGACATTGTTGACTTGCACCCAGTTCA CCCAGTAATACATGTACTTATTGATAGAGTGCAGAAATTTTCAGTGACAT AAAAACTGAACGAAACTTGGTTTTTTATAGTTCTCATTGCCATAAAGCCT AAAATTGGACTAATATCCATAAGTACCCCTTTCTCAAGAGGAATTCAGTT CACTCGTAGCACACCATATTATACTAAAATATTAAGCCATAGCTACTGAA ACTTCAGTCCCATTCAATAAATTTGCTATATCCGCTGGAAAGAGTTATCG ACTTATCCTCAGCTAAAGTTGTTACAACCTAAATACCTAATCATATACTC CTAGAATATACGAAGTTGTTTCAATCTAATCAAGAACTGCAACCGGCACT TGCAAGGAAAGTAGATTAAGCAGACAATTCAGCAAAAACTGAGGGAACGC ATAAACTGCACATCAATCTATCGCAGAATCCAGTTCAGTTTAGCCCAAGA ATCAAATCAAAATTAAAATTCCCAACTTAATCACAACAGTGATCGGCACA GACGCGTTGCCGTGACACCCTTTTCCAGTTAGTTCGGTCCAAAATTCAAG GCAACAAAATACAATATATACAGAGAGAGATTGGATTGTAGATCGCTATT ACCAAGTAGGGCTCCAGGGTGTCGAACCCAAGAACGACATCCGCGAGATC CCCTGCTTGCACAAAAGCGCATCAGCCGCTAAGAAACAAGTTTAAGAATC AGCAAACCCAAGAATCCGAAGAAAGGACGTGGTCCTGGACGAACCTTGGG CGTCGGGGACGAGGAGGGAGGTGATGGTGGCGCCCCAGTTGGCGATCTTT GCCGTGATCCTGCCATTGGAGAGCTCAAAGATCTCGGGCTCGGCTGCCAT TGTTGCTGCCTCGGATGCTGGCTAGCTTCCCTAGAGAGTTCGCTTCCCTA GATAAACTGGTTGTGCTTCGCGAGATCTTCTTTTCTTTTTGGACTTTTAT CTTATCCATCTACCATCTTGAAGCACACGCTTCCAAGCTTTGTGGACCCT GCAAGATTTTGGAGGGCTAGTTTTTTTCTTCTTTGAGATCAAAAACTCGA TTTTACCAGGCTCATCAGCATCGCAACAGAAAAGTCGCGTATTTTTTTCC TGTAAAAAAACTAAACCTGGTTTCGTGGCTCGTTTAACAAACCTGGTTTT CGTGTCGAAAAAAAAGCCTGATTTTGGCTTCGTTGAAACAGAGTCCCCAA CAAAACCGGACGCACCTCCTCCAGCGTTTTGTTATGCACAGTACTAACCG TTTTCTCGCGCATTCGTGTTTTTTATCCCCGAGTCCCCAGCCAACCACAT ATTCTCTTTTTTTGTTAAAATTTCGTTTTTTATAAAAAGTTTCGTTTTTG CTATAACTAGTCTCGCTTTTGTTACATATAGCAGAAAACGGTTCGGCTAG AAATAAAAAAACAGATTGGAAATCGTCGGAGATTTCGCCGGAGACCTCGT CGGCGACCGTGTAGCAAGAAAGTTGGGCTAACGTAACATATTTAACCTCG CCGGAGAATTTCGTTGGTAGACCTCACCGGAGACCGTGTAGCAAAAATAT GACCTATTGTAGCAAAACCGCAAAACGGTGGTAGCAAAAAAGTTGTGCTA ATATAGCATATCTGACCTCGCCGAAGACTTTCACCGGTAGACCTCGCCGA AGATCGTGTAGCAAAAACTCAACGCTATTGTAGCAAAATCATAAAACGGA TATAGCAAAATCACAAAACGGATGTAGCAAAATATTTTTCTAATGTCGCA AAAGGGACATCGCCGAAAACTCTCGCCGGAGATCACGTAGCAAAGCTATA GAAATTGGTTGTAGCAAAATAGCAAATAAGAGCTTCTTCACTGTGAAGTC CATCTCAAAGGGAGCACCACCGTCAGGGCCGGTCCTGAGATTTCAGGGGC CCGGGGCGAAACTAAAATTCTGAACCTCATATTACAAAAAGTTTATGCAT ATATCAGATGATGAAAAATAAATATTTTAAGTATACTCCCAACTATAACA TTCATTTAAAAATAATAATGTTTGCATGATACCTTCAAATTTCCTTCGAA AATTCCTAGAAGCAAAGTCCGTGACAATGGAATCAATATCAATCTGGTTC ACTAACTTCTTCTCTATGTATAGAGTTGCCAAACCATTTAACCTCTCCTA AGACATTACAGATCTCAAATAGTTCTTCAATAGCTTCTTTCAGCTTATGC AACAGTCACCGGCATAGTAAATAAGATCCGATAAGCGATAGAAATATTAG AATAATAATATTAGCAGATTCATCAATGATTACTCACATTGTCATCGTCT GCGTTGATACGAACATTGTCCTCTGTGCCGGCATTATCTTCTGAATCAAT ATTAGTGTGTTCCTCCACAACTAGCGCCAACTCATCTGGATTGCTTGTGG TGCTTGTGTTGCTCTTCAAAAATTTATGAAAAGATCCTCTCTATGATTCT ATTAATTTCCTCTCTTGTTCTCTTCTTTTTATTTTCTAAACACCGGATTT AGACGCCATAATCAGTTAGCCTCGCTTGCTACAAACAAGAAATCAAGAAC AACAATTACTAACTAGAATTAAGAACTAAGAAATAAGAATTAGGGCTAGG CGAGGGCAAACGGCAGGCAGATTTGAAGATCGTCGATGGCCTTCCTGCAT GCGGTGTGCCTGACGGTCGATCGTAAAGGGATTGAGGAAGGGCGCTCGAG AGGCGATTAGGCGACATGAGGCGATTAGGTGACGGGACTCGGGAAGTAGG GCATGGCTGGTATGTGGGAAGCCGAAGCGAATAAGTGAGTATAGACCAAT TCTTGGAGTCGTCGAGCACTCGAGTCGAGCACATGCTTTGGTCGTGGTCA AGCGATGCGCCGATACCTTGGAGTTGTCGAGTCCAGCGATCGCTTCCTTG GCCTAGGAGCCGATCGTCGAGGCAGGCAAGCGATCTGGCCTTGCGAACGA TCGATGCCCATTTCCTGGTAGCGAGGGAGTCGATATATAGCATATAAAAA TGTTTTTTTATGATGTATAATAAGACTATAAATTTTTGGGCCCCTACTTT TTTCGGGCCCGGAGCGACTGCCCCGCTAGTCCCCCCTCAGGACCGGCCCT GACCACCGTCGTGGTCTCCCCAGCGTGCGGGTTATAGGGAAAGTGGAGGC GAAGGGCGGGCTCCGGCAGCCTACTCCGGCCGTGGTGGTGGCTGTGCGGC GGCGCCGGAGCAAAATACCATGGTGCGGGCTGTAGGGCGCCGTGCAGCAG CGACGCAGAAAAAGACGGCAGCGCGCAGCAAGGCAAGGCGGCAGCACAGG AAAGGGTGACGGCGCGCGGCAGGGCAAGGCAGCGACGCGGGAAGGGGCGG CGGCGCGCGGCAGGTCACGGCAGGGAAGGGCGGCGGCGCGTGGCAGATCG CGGCAGTTGGTGGCGTTCGCGAGGAAAAAGCCCGGCGTGTGATGGGCCCT CTCAAGACGTGCATGAGCGAGCGAACCCGGGGGGATCGAATCGTTCGATC GGATCAAATCCCCCGGAGGAGTAGTATCATTTTACTTTTGCTATTTACCA TCTTCCGGCCATTGAATGGAGCCTAGGACAACCTGAACCTGGGAGAGTGT CATTTCCAAAAAAGGATGGTTTTGAAATAGATCGTGGGTAAGCAGGGATA CTCATCTCCTCGTCTTAGAGCATCTCCACTTACGTTACTAGAACGACTGA ATCTTTTTTTTATTCGGACGCCAAAATTTGCCAGTCACATTCTTAGGATC CCGGTTTCGTTCTATGTAAAGGAAGACGGCACGGCGGACACAGGTATGAT ACTAAGGGACTTTGAAGGGGAAGCGAGGTTCTCGGCATATCGAGCGAGCT ATACATGTTCTTCCGCCCTAGAAGCTGAGTTACTCGCATGCCACGAAAGA ATAAACCTCGCTCTTACCTGGTGCACGAAACCCATCGACGTGAAAATGGA CTACGCAGCAGCTATTATAATGATTAAGTCAACATATAAGGATTGCTCCA CATTGCTCATATCTAATATCAAACGAAGCCTACTTGAGCGAAACTGCTCC TTCCATAAAGTCAATAGAAGCCAAAATATCATTAGTCACAAACTAGCTCG GTTTGGTAGGACTAGAAACAAGACTCAATTCTGGATTTGGGGTCTCCCTC AAGAGAGTCAGAGGGATGTAATGGATGAATGTAACACTCTTATTATTAAT GAAGTCTTGTTTTTGCAAAATAAAAAACTTTGGTCCGGATTTCCCAGACC ATTCCCAGCATCCCGGGAACGTCAGACGAAGCGAATTCGGCGGAAAAAAT AGCCGGCGAGTGGACCCGCCCAGTTAGCATATATTCATCCAAAGTTTGCC CAGAGTTCGCTCATATTCGCTCAAAGTTTGCCATATTCAACCATATTCGC CCATATTCGACCATATTCGTCCAAAGTTTGGCCATATTCGCCCAAGTTCA TCTATATTCGCTCAAAGTTTGCTTATATTAGCCCAAAACCACTTACATTC TCCCATATTCGGCCCAAACTTATATTCGCCGAAAGTTCGTCCGTATTCGT CCAAATTTCGCCAGATTCGCCCAAAACCGTCTATATTCGCCCAAAGTTCG CCGAAATTTGTTGAATTTTAGGCAAACATGGAAACTCGCCTGGAAATGTG AGTGGGAACTTATAGTTTTCGGGTCGAAAACTAGTTTCGTCCGGACCAAA TCCGTCCGGATTGGTAACAGTGGGGATGCTCTTAGCACTTCAACTACTAC TTGATAGGATTATCTATAAGCAGCTAAACAGAGAGTATTCTCAACGTATT GAAAAGTCCAACTCAAAAGCCACACAAGGGTGTTGTATTACTAGCAGTTT GGCCGTCATGCCGGGATACAAAAAAACAGCAGCTCGCTGCACCAACTGCA AGTTTATAGCCTGGAGTCGTTGCAATTCAAGCATCACTCACGAACGCATC AAAAAACCAACGAGACAAGCAGCCACCGCATATATACTAGCAGAGCAACA CTCACCGCAGACACAGGATGCATCTAGCAACCAGACCAGCGGGGAAGAGG GCGGCCAGCCTGCCGCATGAGCATTCTCATCCCATCCTCGCCCACCTCGA CGACTGCGTCCGCCGCTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.