Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA003886

[Submit comment/correction]

Sequence	AA003886
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA003886
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGGCACACAGCTCACCCCCCATCCCATAATTCACACTCCCATGCATCTCA CCAACCACCAGATAACCAAAACATCATCACGCACATATGGTTAAGATCAG CTTGCCATGCATCTAGATCCCATTGTAGAAACGGATCAACAGAGCAAAGG ACGAAAAGAAAAAAAAAACTCAACCAGGCCAAGCAAGAACATCTACCCAT ATGGAGTACGCATCACTAATATGCCTCCTCCATCGGCGCTATATAAGCCT GCACTATTGTATCTACCATTGTAGATAGCTAGTCGCATCAGCATCTGCAC CGGGTCCTAGATCCACAGCCACCCGTGGTAGTGTACGTCGTCCGGCCTTG CGCGGCTGGGGGATGGACGCCATCGCCCACGGCGAGGAGGTGGTGGCGAG GATGTGGGAGGAGCTGCCGGTGCGGGTGGACTGGGCGACCGTGCCGGCGC AATGCGCGTACGCGTGGGCGCAGGCGAGGGCGTTCGTGGTGGTGCCGGCG ATAAGGCTGCTGTTGGTCCTGTCGCTGGCCATGACGGTGATGATACTGCT CGAGAAGCTCTTCGTCGCCGCCGTGTACTTCACGGTCAAAGCTTTCGGCC TGAAGCCCGAGCGCCGGTACCGGTGGCGGCCGATCACCGCAGCAGCCGCC GGCGACGGCGACGAAGAGGCCTGTCTCGAGGGCGGCGGCGGCGGCGGCGG CGCGGGGTTCCCCGTGGTGCTGGTGCAGATCCCCATGTACAACGAGCGGG AGGTGAGCAAACATACTCGTAGAATAGTGTGTTGATTATAATAGTAAAAG AATTTAAGCACAACAAGTAGTATCAGCATGGTCCATCGATTTGACCTCGC TGCCGCTGCTGTTTGTGCCGTGGTCGTGGGATTTGTTTACTACTATTGGA GGAAGACGTGGTACTGATTCCTGTTCTTGATGATTCGGTGTGGACAATTG AATTGAAGGTGTACAAGCTGTCGATCGGAGCGGCATGTGCGCTGGAGTGG CCGTCCGACCGCTTGGTGATACAGGTGCTGGACGACTCCACGGACCCCGT TGTAAAGGTAAGCAAGCCCTTGCGCATCCCCCGCGCATTCCCGTGCATGT TCGCGTCCACCTTTTACTACTTGCATGCTGAAATTAAATGAAATCATTGA GGCATTCGGTTCTTCGCACGATTCGCTTCTTTTTCCTGCAAGCATAATTT CCTATGTGGACTGCATGCGCGTCGTTTCCTCGTTGGCACTTGGCATCGGC AATTGGCAGATGCATGACATGGACGCCCCCGGTTGTGGACTAATTCCCTT GGTGGCATTCGCCGGCCGGCCGGCCGCCGTGTAGAAGAACGCTCGGGTGC CTGCTGTTTGCTTATGTAGTGATGAGAAATCAGTGAGCCCGTGACATGGC GTCCACGTAATCCTCCTCCCTTGGGAAAATTTAGCAACGCCCAACAGGTG CTCACAATGAAGTGGCACGCCTGTGGAGTTACCGCTCGTGGGCTCATGGC CACACGTACGGACGGACACCGTCTGTAGCGAGTCACCCATCCCTTGAGAT TGAGAGGCCAAAACTGGTGCGGCAATCCAGCATGGAGACCAGGCGCGTGT GCACGGCCTGGGTCTGGGGGAGAGAGGGACAGCGCTTGGTCAGACGTGGC GCCAGCGCCAATCTGGGATGAGATGGATCGTGATTCGTACTGGCTGGTTG CCCCGGTCGCTGCCCTTAAACTGTAGCGCCACTCCGCCCTGCCACTCCCT GTCGTGTTCTCAGTCGCTGCCGAGCGGTGCGTGTACTGACTCCGATCTCA GAAACACCCCGCTGTTGCGATTTACTACTCCATGGGATCTGGCTATTTCG TGGGCATGTTGACAACGCTCTGCCAAGGTTGGACCGTCACCTATATATAT CTGGGGCTCAGCTGCCACACGTATAATAATGTATTTCCAGTGGAATGCCT GCCCTACCTACGGCCGGAGTGAAGTGAACATGCCGAATTATTACTATTAG ATCGGGTGCACCGCGTGCGACAGATCCAGCTGATCGCGGCAGGATTAGAG GACTAAAGCTCGTGGCAAAAGTAGTACAGTACTGTACTCTAGTACTCCAG AGTATAGTAGTCCTCGATTCCGTGAACTAATTACGATGTCGCTAGCTGCC GCCTCCTAGCTAACGTGCCCTGCCGGCAAATGTTATGCGATGCAGATGTT TTATTTTATTTTTCAACTGAATTTCCGGCAGATGTCGTGCATACCATTTT CAGGCTGATTGCTGATCTGCATGATGGCGTATGCAGACTTGTGGCAGCAA CCGAGCCACCAGCAAAGAGTGTGTGCGGCGCCCCCGCAGAGTCATGTGCA GCCTACGTAGAATGTTTTAGGTGGTCCACGTAGACCTTGGACACCATTCC CCTCCTTCTGTCATCTTCAACAACTCTGTTTTTGTAGATAGAGGCTTGGC GACCTTTTCTACTATTTTCCGCTTTCTGTTTGTTTTTCATATAACCAAAA GGCTGGATAGTATCATTTTTCTAATTATTATTGATGGGGTCATGGAAGTA CTCCCTCCGTTTAGAAATATAAGATGTTTTAGATTTGTAAAAGAGATGTA TCTAGACATATTTAGTGTATATGTTCAAACGAATTTAGACACTAAAAGAT GTCTAGATACATCTCATTCATAAACCTAAAATATTTTATATTTCCAAACG GAGGGAGTAGGACACATTATTAGGATATGGTTAGAGAATTCTAGGGTCCT AAAATGTTTCTATTCCTAGTACTCCTGCGTGCTACTATTATGCTTGTCTC CATCAACGAACTCACGGGTCATGATAGACATGTTCCCAATTATTATTTCT AGGACTACATCGGAGATGGAAATACCTGACCTGACCATGTAGACATGTGA TAGACAAGGAACGTGAGGATGGGTGACCAGCGAGTTAGGTGGCTTCATCC TTAATGGCAAGTGATATTTTGGAATATTATTTTCTTGATGAAACCCCTTC TCTTTAGTTGCTCTACTTATCTCGATATACTGTTCTCTTTGAACACCTCA ATTTCCTTAGTTATCTGCGATTGGTTGGTCACGATGAAATCTATGCCAAA ATACTTTTTAAAGGAATATATAATATAAGGAATTGAAAAATAATAATACT CCCTCCTATGCAAATTAATGGACTCAGATTTATATAGATTCAGTTTATCT AAAGTCTATTACTAATTTTAATCAGAGAGAGTAATATAATGGAATATGTA GGCAGAAACCGTGACAGTAGATCAGCATGTGGGCCCATAAGACAGATATG CTAGAACGCACATTTCTCGCTCACACATATGCCACTATTTACCGGGGCCT CCATGCGTAATCTGTGCATGGGGTGGATAGTCGGGTCCCATATGCTTTCT TTACAATCGATTTCACCAAGAAAAAATTGCCCGAAACAAATCTCTTTTTA ATAATTTGGGCATATTTTGTACTTTCTCTATCTTTAATTACATGTTGTAA ATTTGTTTAAATTTTCCAGTCAGCCTATTCTCGTCTGAATTCTTCACTAT ATGGCTTGTCTAATATTTTAATAATATGGACTATCTTAGAAATATGCTAT TTCAATACTCCGAAAATAATCTCCTCGGCTATCAATCTTCGGCTATCCTG TATCTTTGAGAATTTAAAAAAAGTTGTACCACACAAGTTTAAAAGAATGT GATAAAAGTTACCTAATGATATGGGAGCAACTAAACTAGAATTGACCAGT CCATGGTACTACAAATCCTCTATGCAAATTATCGGCAGATGGTAGCTTGC TTCCGCTGTCCTGCCACCCGAAACAGCATTAAGGGCCCGTTCCGGACGGA GGAATGCATGCCAAAGGAATAGAAAAATGTGGAGGTAGAGAAAAGTAATC TAGTTATAAAACTAAGGATTTGAAACCATAGGAAATTTTCACGCAAAGAT TTTCCATCCAGTGTGAGTGGATGTTTTGTTTCCTCTGGAATTCGTACGAA ACCACGGGTAGTGAACAGTGTTCATTTGAAACAGAGGCCAGCCTTTCCTG TGTCCCGAACGGCCCAAAGAGGTGCATTCCTATAGAACGACGATTCCTAT GGCTTTCCTGTGAGAATCCTTCATCTTGAACGGGGCCTAATTGTGCACTT GAAGGAAATACTGCTCAGATGAAGATATATATTCCCCTGATCCATATTAG TTGACTTAGATTTGCAAAATTTAGACGAACCTATATATTAAATAGTGTCT AGATTCATCAAAATCTACTCCTCCATCCTAAAATAGATGTCTCAGATTTG CCAAAATTTGGATGAATCTAGACACTATTTCGTATATAGATTCATTCAAG TTTTAAAAAAATCTGAGACATGTATTTTGGAACGGAGGGAATAGACAAAT TTAATTCAACTAATATGAATAGGAGTGAGAACCATTAAATACCATAAAAA AGGTATCAGTGTACTATCAGAATACAGACAAAGAGATGGACAGATAGATC AAAACGGATGGTCCAGACAACTTCACGCGGCGGGAGCACTGGTGCTCGTG TGCTAAAGAATCTTTTCGCAACTTTACACTATATAGTGAATTTGACTGTG TGACCTGTATTCATACATATCCGAATGGTGCTCCTTGCAAACAACACGGT CGGCGCTTTAACCCCGCAGCGGGTCACGCGTGCGCAATTCCACACGACCT AGCAAAACATTCTAAGCCTGCTGACTCGAAGCTTTCAGGGTACAGTGGCC TCCAGTTATTTTCATTCCCGATCCACCAATTCTCCAAACAAAAACAATCA CGAGAGGAAATGGATAAGCTTACTCTTGAGATCCGGCAAGCACAACCGCT GGCTCGTGTCGTGTCCCCCTTGCTACGAGTCTACGTCATCTACCAAGCAT CCCGAGGGTTTTCTGTGCCATGCTAGCCCCACCCAGCACTTGCAAACTGC AACTGCTAGTAGCAGGAAGCAAATGCTGCTGCCCCGCCCCGGATCTGGGT CAGCACAGTGTTTCTGGATTGAATGTATCCAGCTTCTTTAACTCGGGAAT AGCATTGGAATACAAATTCACAAGGAAATTTAAGGCGATAGTGTTTTTCA AAATTTAAGGCGATACTAGTTCGTTCTGAACCTCCTAGACCCAGGATTTT ACGAAATTCACATTTGTTTTCCAGTCGATCTAACAACGCATTCCAAGCTA GAAAGCGATCGATTAAATCTCATGTAAGATTTGTTTTGGAATATTAGAAA AAAATTGGAATCATAGAGAGACATGGCGTGGTATACGTCTGAACTTTTAT GATATATTGGCTTGTTATTTCGCATTTTTTTTTGCATATAGAGAGGTGTG TGATCAGCAAATCAGTTTTGGAGAAACAGCTGATTTCTGTTATCTTAAGC TCTCTTTTTTTTTTCCATAGTGAGGCTCTTTCATTTCCGCCGATGTTAAA ATGAGGCGTATAGTTGAAGATGCAAATTTTAACCTTGGAAGGCTTGAATG TTTCTGTCTTAGAGGTTTGGACAGCAGAGTACCCAACTGCACATAATGCC AAGCAAACAGATAAACTGAACCCTACAACTGAACTTTTTTTTTTTGCCTT TGACTCCTGTTTCTTCTTTTATAGGACTTGGTGGAGATAGAGTGCAAGAG ATGGCTGGGAAAAGGCGTGAACATCAAGTACGAGGTCAGAGGAAACCGGA AAGGGTATAAGGCCGGTGCGCTCAAGGAAGGATTGAAGCACAGCTACGTA CATGAATGCGAGTACATTGCCATGTTCGACGCCGATTTCCAGCCAGAGTC CGACTTTCTCCTCAGGACTGTCCCGTTCCTCGTGCACAACGCGGACATCG CCCTCGTTCAGACTCGATGGAAATTTGGTCAGTACTTATGTGCCCTGTTG CTGTTGTCAGGAAAAAAAAACTTGTTCTTAGAAGATATACGTATTTTTCT GACCTAATTGGATCTAAGTATCTTTCTATTGTTGATGCAGTTAATTCTGA TGAGTGTTTACTGACAAGATTCCAAGAAATGTCCCTGGACTACCATTTCA AGTTTGAGCAAGAGGCTGGGTCTGTAGTATACTCATTTTTTGGCTTCAAT GGTAAAGTCTGTTTCATCATACATATATATATATATATATATATATATAT AGCTCAAGCATCCAAATCAGCACACAAAGTAATTTTCTGGTCTTACAGGG ACCGCCGGTGTCTGGAGGATTTCAGCAATCGACGATGCTGGGGGTTGGAA GGACCGCACGACCGTGGAGGACATGGACCTGGCTGTTCGAACAACACTGC AGGGCTGGAAATTCGTGTATGTTGGTGATGTAAAAGTAAGCAGATGCTCC TTTACTTGCATGCCAGTAATACTTGAGCTAGTAAGGAAAACAAATTTAAT GATCCATATAACACTGGCCTGTATGTGTTAGGTCAGGAGTGAGCTACCAA GCACATTCAAGGCATACCGATTTCAGCAGCACAGATGGTCGTGTGGACCG GCAAACCTGTTCAAGAAAATGATGGTAGAGATTTTGGAGAACAAGGTTTG TGTTTCCACTAAGGAACCCTTTGACAGGTGCATGACACCATCTTATTTAC TGACATGGTTACTCTGTTTGTGTGTGTAGAAAGTGTCATTTTGGAGCAAA CTCCACCTGCTGTATGACTTCTTCTTTGTTGGGAAGATTGCTGCTCACAC AGTAACTTTCATCTACTATTGCTTTGCCATCCCGGTGTCCGTTTTCTTCC CTGAGATTCAAATACCTCTCTGGGGTATGGTCTATGTTCCAACCGTGATC ACCCTCTGCAAGGCTATTGGATCACCAAGGTAACAACCGTTCAAAATACT GAAGTTTCAGAAATGAAAGTAGTGATAGTATACTCCGTTAACACCATAAA GTCCCTCTTTCAGTTCATTCCACCTAGTGATCCTCTGGGTCCTCTTTGAG AATGTGATGTCGTTGCACCGGATAAAAGCAGCCACAACTGGTCTTCTAGA TGCTGGACGAGTCAATGAGTGGGTAGTCACCGAGAAATTGGGAGACGCCA ACAAGGCAAAGTCAGCCACCGATGGATTAGAAGCTGTCAAAGTGATTGAT GTCGAGCTAACAACGCCCCTAGTACCTAAGCTCAAGAAGTGGCGATTAAG ATTCTGGGACAAGTAAGCAAAGTTTACTGTCTAGAAATTCTAAAGCTAAC ACTATGATTTACTAGTATGTATACTTTTGCAGTACTAGTACACAACTACC GATTTATGTGATTATGGATACTGCAAACAAGGCGCAGTTTTTTCTAATTT TGTCAAATGCTGATCTACAAGTGTTTTTATCAGGTACAATTGCTCAGAAA TCTTTGTTGGAACCTACATAATCATATGTGGCTGCTACGATCTGTTTTAT GCGAACAAGGGATACTACATCTACCTCTTCGTTCAAGGCCTGGCATTCCT CGTCGTCGGTTTTGAGTATATCGGCACACGCCCTCCTACCGCTGAATAAA CTGCACATTCATGGAGCTGATATGCGTGGTTATGATATACTTGCAAGTAA AGCCCCTCTCCTGCACATATCAACCTCAGGTTACATAATGATATACAGGG AGAACTCTTCCTCGGTCTTGGTCAGATTTGATACAACCATTCTTTGTTGC CAAGAAGGCTACTCAAATAGCATCCCCATTCGTTTGAAAATAATACTGAA GCATCATGACGGAAAGATCGGTGCAGCAACAGTCCACTGAGATCCTCTGG AGATACGTTCCAGCTTGGAAGAATAACATCAGCTGTAAATGAAATAACAC TCTTGCCGATTACTGTAGATTCTCCAAAATTAGCCTACCCTGATATGTCA ATGTACTGATGTAGCTTGTTCAGAGATCCAATAGAGTATCATCAGCAACT CGAGTCTAATCCTGCGTAGTAGGCCAAAACTTGTAAATGTACATTGTTTC TGAACACCATAAATTCTGTCAAATTCGGACAGATATTTCGATGCAGAATA TAGCATAAAGCACAGCCGCAAGCAAAGAAATATTTCTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.