Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA002846

[Submit comment/correction]

Sequence	AA002846
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA002846
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CCATCCTCCACGCCCAGGCTCTCACCTTCCCCAACAGTACACTCAAAAAT AAAAGCGAAAAAACAAACCCAAACCCTAAGCCCTCTCCCGATGACGGCGC CGGAGGTCGTGCTGGAGGTGCGGTGCGCCGGCTGCGGAGAGACGCTGGAG GTGGAGCCGGGGCTGACGGAGTTCTCCTGCCCCGACTGCGCCACGCCGCA GGCCCTGCCGCCGGAGCTCATGCCCCCGCCGCCGCGCCCCCGCCGCGCGC TGCCGCTCCACCGCGGCGGCGGCGGGGGCACCGGGAACCGGATGCTGTGC GGAGGGTGCGGCGCCGTGTTAGCCGTCCCGTGGGGCCTCCGGCGCATCGC CTGCCCGCTCTGCGCCGCCGACCTCGCCTTCGACGGGGACCGCCTCCGGC CGTGCTACGCCGGCGTCCAGGTCGTCTCTTCGCCGGGCACTGCTCCTCGC GCGCCCTTGCCCCTTCATCAGCCAGAGGTGCTTGGCTCTAGTACTGTGCA TTTCAGTCAGTGACGGGGTTATTGGTTAGTACTAGAAATGAAGAACTGTA ATTCTAGTGTCAACATTTAAAGTTTTTCTGAAACACCGGAGGATTTAAAT TGAACCAAAGGAACGTGTTGCGTATTTCTTAGAAATGCCTGATGTGCACG GGTACAGATTGCTTGAACTATTCGAAGTATAATAGATCCATCCTTTATTT GCTGCCGATCCCCAATCCTTACTCTTTGGTATCTTTATTTTTTTCATTAC TACTGTACCTTCCTATTAATCTGATCCGTAATCCTTCCAAGCACTAATGT TAAATTGCATTTATTGATTGTCTGCATGGAAAGTTTGCTTCTTGCCCATC AAACAGTTTCTGACTCTTTGGTATCCAAAAATTGCATTATATGACAGTGC TTTGAGTGTTACATTGCATAATGTCATTAGGAAACTTTCCTTTTATGATA TATGTTGATGTACAGGTGTGCGATTTCTAGTAACACTCTCTTCATCCTAT TTTCATTTGTTGTTGTGGACTGGGAGCAGGAAGAGCCTATGAGCCAAGCG ATAGGACAGGTGCAAGTTGGAAGATACAATAATCCAATCCATCTTGAGCA GACACGTGGATCCTTTCCTGTTCGTTCAGTTCATAGGGAGCCAACCAATT CACTCAGATCAAACACGAAGACAGCAGTTTATGCAGGGCGTGCAGATGAT GCACCTGTTGATCTGTTATTGCATGGAGAGGAGTCACACATCAAATTATC TGTCGGGACTGTTCCCTGGCATGATCTTAAGAAGAAAGCTACTCTATCCG CTAGTCCTGTATCCACTGGAGCAGAGAGGGTAGGGCTGGAGCATCCAAGT AAGGTCAGCAATATACCGCAATCACAACGTGCGCCTTCCAGTTATTCAGC TCATACAGAGGAGTTACACAAACAGCATCGAAGTAACACCGCTAGAAGTC ATGAGAACCAGAAAGCTAGACATGCTTCAGTATCTAGTATTGTAGTGCAG GAAACAGTAAAGCATCCGAGCCACACTGCTTGTGCACAATATGTGCATGT CGAGTCTCATGGTAACACAAGTAGATGGATTAAGAAGAGGAAAAAGAGCA TCTGGACAACTGGTGGGAAGAGCAAGAAGAAACATAGGGGCTCAAACGAA GAGCTTCATCTTGAATGTAATAAGCATTCGTCTGCCCAGCCAGAAGATAT TGGGAAAAGCAATACTGTTCAGGAGCCAGTTCCTTCTCCGGATGAAAATC AATTTAATCATTCAGATGTTGACAGAATAATTGCCAATCTTCATCCTTGC TCATTTTCTCAGAAGCAGGCGCCTCGAGCAGGACCAAACGAGCTGGACAA CATCGATGTGACGTTGCGTCCTCTCTCTTTAGATCATGGTATATCTCTAT TTAACCGTGTTCCACCGTGCTACAGTCAATACTCAGAAGGGGCTAAGGGT GATCTTCCCAACCGGAGTTTCAGTTCAGCAGAGGAGCATGAGATGCCTCA GGAAAGTTCTAATGGGACATGCCCTCATGGTAAAAGTGGTACACAAAGGA AACAGATACAAGATGACAGTCATCCTGTGCAAGTGGAAGTTGAGTGCCAC CACAACAAAGCTACGGGACAACACAAGACTGCAGCAAAAGGCTTCATGCA TTTGCCAAATGAGAGGGAATCTGTTGAGAACTGGTCCTGCACTGGTGACC ACCAGCAGGTGACTGTTTCTGCTGCCTGCTGTGATCCTACTCCATCACCA GTGTTGACTGCCACTCTCTTGCCCAGTGCCGCTTCGCCTTCTGTTTCAAG TGTGTTTCTACCCAACTATATTGATATCTTCCCAAACACTGTTTTCAAAT TATATCTAAAACTGTTGTCGGTTGTGGTCTCGCTTTTGCAGGATCATCAG TTCATCGATCACCGCCGTATTGCCAACCGCCAGAAAGTCTCCATTCCCAG GCATGTCCATCTCTCTTGTTTTAGCATAGGGTCATGGCGTTGTTTCTATG ATGCACTGTCAACACGTAGCATATAATTTACTCAATTAGATTGGAAAGTT CTGATTGTGAATTCATCGTTATCTTTTGAGTAACTGAAATTCTTCAGGTC GGTTTGTTTGACCAGTGCCAACTTCTTATGGTTCTTCCTTTAGATGCCCC ATTCTTTTGGATTCAAGTGATCTTTTCTATTATCAATGAAATTTATCCGA ATAACCAATATTAAGTGTTCGCATATTCTTCTTTGTAAGTGATTGCATAA TTGATTTCATGCAGGATGCAGATGCTACTGGCACAGGATATAAGAAATCT AAGCGCGGGGTGCGTGGCCCTACAAAATTCATTGAACCACGTAAGGAAGC TGATAGGCCTGTGCTGACTCCGATTAATGTGGAGTAAGTCTTCTCAGATT TTTGCATTTCCATCAGATATCTGGGGTCAACCTATACTATATAATGTTCT TGTACTTAGCATATTGACTTGCTGTACTAGCAGCACATGGGATATTGATC CTCCTTGTCCCAAGGTGGCCTCCACCATCACTTTACTTCTCAAGCAGTGG CATCCAGGATCAGCTTACAGACGGGTTAGTCAACAAACAGCTGAAGTGTA CCCAGGACAATCGGTTCTCCACTTTCATGAGTACCATTCAGATACAAAGG ATATCATCATGGATGAATTCCTTGTAAGAACGTTTATCCAAGGATGTGGT TTGTAGATTCATCAAGTATGTATGAAGTAAGTCCCTTCTATTTTGATTAC TGCAGCAACGTTACAAGTGGGCCCCTGGGCGGGAAGCAGAGTGCCTGAAG CTATTTAACCGCAGAACAGTCAGACAGTTTACTGGACTCCTGTGTGATGA GAAGCGAAGGGCTAGAGTCGCGTTGTTTGCATCAAGGAAGATGAACAAAG GTTTGGATATTCCCAAGGTCAATGAACAGTCAAATTTGGATGAGGAAGGT GCTAGAAAAAAGTTGAAGCGGCCCCACAGAGATCCTGCAGGTGTCGGGCA AGAGGATGACGATCCACTTCAGTGGAAGCCATTCCCTCCTGAATGGATGC TGCCAAAGTGGTGGGAGATGCTATGTGAGCGCTGGGCTTCAGAAGAAATC TTGCAGGTCTCTGCTCAGAAGAGGAAGAATCGGTTCACAGGAGGTTCTGC CCAGCACACAGCAGGCTCGCGGAGCATAACCATGCATCGCAAACTTATGG TAAGAGTAAGACTGATTTTTTTTCCTGATACAAACTTAGCCACCTAAATA TGAATCTTATTGAATTGAAATAGATGATCGAAAATGGTGGGAAGCCAGTA TCGGAAGTAGAACTATTTAATAAGACCCACAAACATGACGGCGGTAAGGG GCAATTTGTTACCGAGAAAGCTAGGCGAACCATGGTATGTATTCAGTCGT TTGCATCATAAATAATTACATTGCAATGTCACAGAACTCAGTTTGACGAA TTAACTAGAATTAGCTGTGTCTGCATATTATATTTTTCAGGAGGCCTTCC AGCGGCGTTTGGACGCAGGTGATACTGGACTAGACCCCCATCTTGTATGG TCGCAGGAGGTAGGGGGCCGCAACCGAGGGAGGTACTATGGACTCCCTGG TGTCATTGACAAAGCCCGGATAGGCCCCTTGTCGAAATCCATCCCAGGTT CTTCAGGTGGAAAGACAGAACCGATGTTCACGCAGGATCAGGTTCAGGAT ATGATCAATCACGCCACACAGCAGTTGAATGAAACTTGGGAGAACAGGTT CCAGTCTTTAGAAGAGAGTATGCGTGGCATAGCGTCATCGGGCATTCCAC AGGTAACTTTAAGTTGATTTATTGTGAAAAATGAAGGTTCAGATTTTCAT CCTTGTGTGCCTGTCTGCAGCATAATCCGTGTTCTTCAGCAGTGGGAGCG GGACCTGGGGCTGAGCATGACGAGGCGTCAGAGGTAAATATATATATATA TGGTCTGCCTTCGAAATGTGCATATTTTCAATAGATGAGTCATTAATACA ACATGCTTTGCTTAAAAGCAATCTTGCTATGCACGTTGTACCAGTTATGT GCCTTTCATTTCTCTCTTTTCCCCACTGGGGATCACTGCACACTAAGTTT ATCCTGAGATGAATACTAAATGGAAGTAAGGCTTAGTGAAACTTATATTT ATGTCCTACATGCGCATGTAATCCATCAAATTCGAATTTATATGGAGCAT TATTTGAGGGTGGAATATTGATCTGATTCATATGTGATGCTGTGAGTGTG CAGTATACTTCGGATTCTGCTGACGAGGGAACCTATGAATCCGCAGAAGA CGACAGCGGGGTGCATGTTGGTGATTAGGGTTTAGGAGCACCCTAGTCAC ATTTCTTGTGCAATTTCTTTTGGTAAATAGTCTATTTCCATTATGTCTTT ATAGTGTTTTCGTATATACTGGAGTTTGGAAATATGCTGCATTATCCTGT TTTATTATACTGTAGTAGTTTGCCGTAATTTGTTGGTAGATAGTCCGAAG GTTATTTGGAGCTGGTTTTGCAAATTCGTTCTGCTGTGCTGAAATTCTGT GGAGAGAAGGAATTGGGAACTTCCACATTTTATACCGAGGATGCTTGAAC AAGAGTTACAAACAAAAACAAGCCATAGAACGGTTTGAACCTTATAGAGC GTACAGTGGTACAGAACACACGCGCGCAAATTAACAGCCTCCTCATGTTG ATCGCTCTCAGAACCGCACCATCAGTCGACCTCTCACAGAGGTTCGCCAG AGAGCCATCTATCGACCATAGCGAGACACTCCTTGGGCATGTACTCCGGG GCTGTGTGTCCAGCACCCTACATGTGCACGTAATTAAATCAACCAATTCA TTAGTTTGTTTCCTATAAGGATGCTATATAGCTCCAGCAAATCCAAGTTA AAACAGAAGCTGAATTCATGTACTATCTAGCACGTACCTTTACAGTTGCG TATGTTAGATTATTGGAGTAAGTTCTTGTGTATCTATGGAAGTAAGAGAA ATAAAAGCAGTGTATAAGGCATCAATAATACTTGCTGCACATACAATGAC CTACGAACGTTCAATTTTCTCTACTAGTAAACATGGTACCCATTCTTGTC ACATGCGTTCTGAGTCGGTCCTTACCCTACAACCTGGCCTTCCACATACC ATGGCCGCCAATCATCTGTGATGGGCAGGTTAAGTTGTCTGATCCATGCT TGGGTGCCAACATAAGGTATTTTAGCATCATGATCGCCGCTGCACCGTCA CACATGAAACATACAAATTATGGCAGTTCAATAAAGAAAACTTGAAAGGA GACGAGAGAGAAACTGGTGCTAGAGAGAAAGTCATTCCCTTACCTGTAGA TCATGGCCCGATATCCTTTAGTAATCAGTGCTAAATGATCATCCACTGCA CTGCTGATTTCCATTTTGTAAGGTATATCGAAATCACATCGTAGCCATGA TGGAACTGTTTCCTGCACAGTATAGACCGTATCTACCAAATAAGCCCTTT GTTTTGGAGGAAACAATGTCTTCTTTGATGTCGGGCCTAGGGAATTCTCT CAAATATTACCCCTACCTTACCTTGTGAATACACAAAGTCTCCCTTACAG TTTCATCATTTGTCCATAACTCGGATAGAAAGTACGTGCCATTCTGCATC AACCGAATGAAGCACACCAATTAAGATGTTGACGCAGTTAACACCGTACA ATCAGAACGACAAAATGAAAGCAACAAGAACTCTGAATAAAACTAAATAC AGAGAAAACCAAGAAGAAATTCAGATTAATATATGAGATGTTTACCCTGC AGATGGACCAAACTGCGGACTCTAATAGCTTTTTCCTACCATGATCTTGC AACTCTGGCTCCTTCTGAATGGTGATACTTGGATATTCTGGACAACGTGT CTCCAAGATGTGTACATCATTTAAATCCTTTGTACACTGCGATATCCATG CCAGATTACCAATTGAGTCACCAAGTAGCTCTTACAACTAGCTTATTAGT GTATTGTGTGTTACGGACATAATCAACATATTCATGGCCGGTGTTGTCAC TTACTTCTTTGATGGCTTGGAGGGAATTGGCACAGTTAGCGTTCGATGGC CTACGGTACTGTCCTCCACAGCCTTCACGAGCAGCCTGCGGATTAAGGGA TATAAGATCCAAGTAAATAGGAACACACTTGACCTTATTCAGTATTTAAG TCAACTATATGTCGTCCTCAATGATACTCCAAGTAAATAGGAACACACTT GATCTTACTCAGTATTTAAGTCAACTATATCTAGCCTTTCTGATTGAGAA GCATTACATTTCTCTTGAGAGGGAGTAGAAGCTAGCCAACATCCATTAGA CCAAATTGTGGAAATGTTGTACTTGTCATTTTCGTGTGGCACGGAATTTA TCTTAAAAGATAAACTTAAATTAGTTGACTATGTCACCTCGAAGAGTTCA TTTGGAATGATTCCCATCCCATGAAGATATGGAACTCGAGAGTTGACGTC AGTCGCTGCATCAGTCAATGGATTGCCCGCAATGACACCCTGCTCAATTA ACATAAAAAAAATGTATTAATTTATCACTCCTTACAAAGAGTATGAGGGG ACAGTAGATTCACACACACATATATAAGAGTGCTAAAACAATTTTTCATA TGGGACAAGGCATTACAGAAAGGATAAACGTTGAACTGTAATTGAAAACA TCTACCAACCTCTGTATCTGAGAGTGAGATCATTATAAAGTTTCAACTGC CAAGGCATCAACGAAAATAGGGGAGACTGGGGGACACCGAAGCAAAAATC AAATAGGAAAAATAAACATGTCTCAACCGAGTACTTATAGTCTTGTTGCA GGTAACACTGGACTGTAATTAGTAGTAATTTGCAGACATCTTAGAAAAAT TGACTAAACAAAAGTAAAGGGTAACCATGTTTTGAACTTACGCATTGAAT TTCAAGAACTACATAGATCCAATCCAGTCATCCAGAAACATATATATTTG AACAGAAATATTAAAGTTTAAACAGAAGTTATGTTTTGCTTTATAATGTT GCTGTTAAACTAAACTTTGTTGACCTTGATAGAGAGAGAACCTGGCACTA CTCTTACTAGCTCAATCTATTGACTTAGATGTAAGTAAAAGAAGATTTGT ACAGACATAAATCTATAGAAGTACGTCCATTGCAAACCTTAGGAAAGATA ATGATAAACATTGCAATAAAAAGTAGGTGAACCTTGAATAATATGTCGGA AGACAAAATATGGAAGTAATATAGAATACCTTGAGATTGATGAGCCGCTC ATCACCGTATTCTATCCCTATAATGAAACCGAACTGTAGTTAGAATAACA CATTTTGTACTAGTAAAAAATATACGCTTTGGACAAAATCAACGACACTT ATTATGGATCGGAGGGAGTAAGATAAGTAGTCCTTGTTGATAATCGTGCA CGACGGACGAGGTTCAACCACCTTTAGCAATTTTCATAGCAAGAGGAGGT ATGATTACGCCGCTATACGAGTCACCAGCAACATAGAACGGATTGGGCAA AAACTGCGGGTGTTCATCAAACCACTGCAGAGAAAAGAAATGAAAGTGAA ACCTGTGCCGATGAGTAATCTGTACCTTCTGGCACAGAAAAACATAATAA GTACGGAGTATAAGAAAAGGTGAAGAGCGAACCGTTTGGAGAAAGATGTG CAGCTGCTGAATAACAACGGTGTCACTTGGTACAGTTGTGTTGTCTGTGC TGTCATATGAGAAGCCTGTCCCTGCCGGAGCATCCACGAAGATGACATTG CTAACC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.