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GrainGenes Sequence Report: AA025309

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Sequence
AA025309
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA025309
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CACAAATCCTAGCTGCCGCCGTGCCGCGGGGGAGAGAGAGAGTGTGTGTG
TGAGAGACAGCCCTAGCCAAAAATTCCCCAATGTCTTCGCAGATGGAGAG
CGAAGCCCGCAGCAAGCGCAAGAAATCTCGTCTAGTGCGCAAGGCCAGCT
CTGTTTCGACCTCTTCCTGTGAAACTGGGTGAGATCCCCCCGCCTCCCCC
TTCCCCTCGAGTGCGCGGCTGTTGAATCACTGTTAAAAAAGCAAGTTTTT
TAGGGCTTTTTTTTATTTGCGACAAGCGCGATACAACCACAGTTTACAGG
TTTATTTCTTGGCTTGCGAATTAGCTCAATCTCGACGCATGCTAGGCGAG
CCTCATATGCAACAGCATGTGCCATGGGGAATGTGACCAGCTTCCAACCA
ACTACTCTGAAATTGAATTCAACATTTCTAATTCCCACCAAGCCAATGAG
CCCAAGAATCCCGTCCTAGGCCCAAGTTTATTCCTCCGGGCATGCCATCC
CGAAAGCATTGCCCCCATAATAGGGTCACCAGTAACATACACTTAGGCTT
GTCCTGTATACTAATTGTGAATTAAGTGTAAATGCATTAGTGACAGGGCT
CCAACTATTAACTTGGTTATAGTGCAATGATCGTTGAGAATATTATGGAC
TTTTAAATATAAAAACTATCTTATTACTCTTCGATCCTGTTCCCCCCTTC
AGGTCCAAGGATCATGTTGGAGGTGCTGGTCAGCCACAGTCAGCACAAAT
GGTGGAAGAACTAGCTGTTTCATTCTCAGAGAAACTGCTTGATGATGATA
CAGAAACAGGAAAACTGGTGCATGATGATGATGAGGTCGGGGAAGGAGCA
AATAACAACACAATCCTTAGTCCCGACCAAGTTGGGTTAGCCGAAACATA
CAAAGAGATGTTGGCAGATGAGGAAGATGGCATGGTTAAATACAAGCTCT
TCTGGGAAGACACTTGGGGCAGCTCATCTGGTTCCTTCGAAGACTGCAGT
AAGTAACCTGCTTATCTGATTCATGCTCTTTTCTTCTTTCTCTATTATTA
CGTCTCAAGCAGATTACATTGTTCCTTGTACCTTGCTCATGCCTTCCTTG
TTTTTTGTTTTCTACTTACATATTAACTAGAAGGCCGCCATCTTTTTGGT
CAGGGTTTTTCATTTCTAGCCTGAATTAAGAGACATGGCAAGAGCTAATT
AGTTGTATCTTTCACTTTGTTTGGTTGCAGCATATGTGGCTCCCTTACTT
TATGCACATGGCGCTACCCCAGCACATGCTACTATCTGCAGTTGCTTGCA
GATCTTCTCCATCAAAGTCATGGAGAATGAAGTTTGGAGAATCAAGTGGC
CTGTGGAGGTGTATGGCTTCATTGCCGCTCGAGACACCGTGGATCAGAAT
CGCAATCTTCTGTTCAGCCGCACAAGGGATAACCCCCAAATTCTCACTCC
TATGGTATTTTCTTCTTCCTAATTATCTTGCTGTAGGTACTGACATAACC
TGATCTACTACTCCCTCCGATCCATAATAAGTGTCACTGATTTAGTACAA
CTTTGAACTAATAAATTAGCAACACTTCTATGGATTAGAGGGAGTAGTAT
TATTCTATGCACCTCTGCGTATCTTTTTCGTAATGAGGGCCATGAGGGCA
TATCCCTCATCCAGACTTGACCTACACAGGCCAAGCTGTGCCCGGTGGTG
GTCACATTGTCTAATCATGAAGAGAAACTGACTTTAGGTTGGTCAATTAC
TATTTTTGGATGTAGTCCACTGATTTGTAAAAAATGATGCTTGCAGGATC
CATTTTTGCAGTTGACTGGCCCCTGCCGCCCAATTTTGTTGATCGACCCT
GTCGACTTTGAAATTCAACTAAAAGTGAAGGGCACAACAGAGTCTGAAGA
TAAAATATTCATGGCTAAACGGTTTGTATATGGACATGGTTTTGGACAGT
CCGGTCATCTTGCCTGTCGTTGTTGGGTGGGTAATTTTTGCACGCTAGAG
ATCACCTCTGCGCTACTTGGTAGCACGGTTGCAGCAACTATCATCTCTGC
TGATGTTGTTGAAGGGTCATGGCCTGATGATTGTGGAGGTCGTGTGGTTT
CCCGGACTGCTGGGATAGATAAGGATTTTGTGCTGCTTGATTCTGGAGAT
GGACCAATGCATGTGGATACTGATGGCCATATTACCCTTCAAAGGGGCGT
TGTTTGTGTCCGGCGTGCTGGAATACTCACGGTTTCTGTGGAAGCCTACT
CCAAGGATGGTATCTCTACAGTAGCTCATGTTGAATTCAGGCCCAAAGAT
TGCTGGACGAGTATTGGTACTTGCAACCTTGGCTTCTGCACGGTGATGTT
CATAGTTGGCTGGTCCCTTGCGGCATTAAAGTATGAGATGGAGTATAATG
GTAACTGAAGTTTGAATTTATATGTTTGGTGATTCCAGTAGTATGTTTTT
TTTTTTTGACCATGATTCCAGTAGTATGTTGAAGATGTCAAACTGTTTAT
GTATCAGTTAACGAGGCCCTAGCCAGAAGTTCCCCAATGGCTTCTACCCG
CAACGACGACGTTTGCCGTCTCAACCCTCATCCCGACCTCGTCTCCGAGC
AGCAGCGTGAAGCCCGCCGCAAGCGCCGACAACGTCGTCGAGCGCGACGC
AAGGACGGCTTTATTCCGCCCTCTTCCGGCGAATCTGGGTGAGATCCCAC
CGCCTCCCCCTTCCCCTTGAGCTTTCTATTCCTTCTGCTCGGCTGTTGAA
TCACTGTTAAAAAGCAAGTTTTTTAGGGCAAAAGTTGATTCTTTTTTGTA
TGACAAGCGCGAATACAACCCTAGCTTATAGCTTTATTTCTTGGCTTGCG
AATTAGCTCAATCTCGATGCATGCTAGGTGAGCCTCGAAGAAATGCGACA
GCATGCATGTTCCGTGGGGAAAGTTACTAGCTTTCAACCAACTACTTTGA
AATTTCCTAATTTCCACCAAGCCATTCCATGAATGAGCCCCAGAATCTCC
AACTATTTCTGTGCAATTACTGATACTAGGATTGCTAGTTCCTGTGGCGG
GTTGCCCGGGCTAGGTGGTTAGGGGAATCAACATGGTAATGATTGATATC
TCAAATAGAAGTGTTGGTAGGAACAGCTTGTCTACCCGGTCTAGGGCGTA
AATTATAGGGACAGGAGAGAGCTATGCGGGCGTGGAGGCGAGGACGCCGG
CGTGCTGGCGCCGTCGCGAGGGAAGAAGGAGGCGGCGGCTGGGGTTGCAA
GACCGACTCCTTGGGGAGTCGGCAACAAATAGATTGTTTATTGCTTAATT
CTGAAAATCCAATTACAACTCTTATTTATAATAGAAATAGGATAATTGGG
CTAAGCCCCTAACTAGGCCTGGCCGGTGGGCCTCTGCCGGCGATAGACCA
GGCCGGTCATAACATCTCTCCCCGCCTGCGCAAACAGCTCGTCCTCGAGC
TGGTAGTCTGGATAATGCAGCTGGAAATCGGCGCGTGGTTCCCAAGTTGC
CTCCTCTGCTGAAAGGCCCTCCCACTGCACCAACAAATACCAAACATCAC
TGCGCATCTGCGCCCGAAGCACCTTGGCCGGGCTGGGGAGCAGGCGGCCC
TCAGCTGTCGGTGGCAGCGGTGGCGTGACCGCTGGTGGCGCGCCACGGTA
GGGCTTGAGCAGCCCCACATGGAAGACGTCGTGAATACGCGCCCCGGCAG
GCAGCTGAAGACGATAGGCCAGGGTCCCAATACGCGCCAGGATGATGAAG
GCCCCGCGTACCGAGGGCCGAGCTTGCGCTTCGCCCGCGGATCCAGGGAC
TGGTGTGAGCGGTGCAGGAGGCGCAACCACACCCAGTCGCCCACCGCGTA
CTCCACCTCGCGATGGTGGCCGTCATAGTAGTGCTTGGCGACCTGCTGGG
CCTGGATAAGGCGCTGCCGTACCTCGGCAAGCATCTCATCTCGGTGACGG
AGGAGCTCGCCGGCAACCTCCGTCCGTGCCGTGGTCGCGTCCACCGGTAG
GATCGGCGGAGGTGGCCTACCATAGACCACCTCGAATGGCGTAGCGCGCA
GGGCGGAGTGGTAGGAGGTGTTGTAGCAGTACTCCGCCCACGCAAGCCAA
TCCACCCAAGCACGGGGTCGATCACCTGTAACACAGCGCAAATACATCGC
AATCACCTTGTTAACCACCTCGGACTGGCCGTCCGTCTGAGGGTGGAACG
CCGTGCTGAAACGGAGTTTTACCCCCGCCATGCGGAAGAGATCCCGCCAG
ACATGCCCCGTGAATACCGGGTCCCGATCACATACGATCGACGAAGGGAA
CCCGTGGAGACGGACGATGCCATCGAAGAACGCGCGGGCCACCGACGCGG
CCGTGTAGGGATGGCCGAGCGCGATGAAGTGGGCGTACTTGGAGAAGCGG
TCGACCACCGTGAGAATGACGGACTTGCCCCCCACTTTAGGGAGGCCCTC
GATGAAGTCCATGGAGATGTCGGCCCAGACCTGCGCGGGCACCTCGAGCG
GCTGCAACATGCCGGCTGGACGCAGCGTCTCCGTCTTGTTGCGCTGACAC
GTCGCACACGAGCGCACCCAATCCTGGACCATGGCACGATCTCCAGGGAG
GTAGAAGTCAGCGCGGAGGCGGTGAAGGGTCTTTTGGACACCCTCATGAC
CCGCCGAGTGAGCCATCGACAGCACCTGGTGGCGTAGGTCGTCATGGTCG
GGCACGAACACCCGGCGCCCATGGAGAAGCAGTCCGTCGGCGAGGCGCCA
TTGCTCGTCCATCTCACCCGCGTCAAGTTGCTGCCGCAGGAGCTGGGCAT
CTGGCGCTATCGCGGTAGCCTGACGGATGAGGTCGAAAAGGGCGAAGGAG
GGCCCCGAACGGATGCACAGCAACCGCCCCTCCGAGGCGACCTCAGCGTC
ATCGGGCTCGGCGTCGCGGCGAGACAGGGCGTCGGCCGCGGTGTTGAGGC
GTCCCGGGCGGTACTCCACCGTGAAGTCGAAGCCGAAGAGCTTGCTGATC
CACTGGTGCTGCGGCACCGTCGACAGCCGCTGATCCAGGAGAAACTTGAG
GCTGTAGTGGTCGGTGCGCACCCGGAAAGAACGCCCCCATAAGTAGGGTC
GCCAGTGGCGCACGGCCTGCACGAGGCCAATGAGCTCCTGCTCGTACGCG
GCGAGCTTGAGGTGGCGGGCAGCAAACGGCCTGCTGAAGTAGGCGAGAGG
GCCGTCGCCCTGGTGGAGAACAGCACCGAACCCCGCTCCCGACGCGTCGC
AGTCGACGACGAATGGCCGGTCGAAGTCCGGCATCTGGAGCACGGGGCCC
GTCGTGAGGGCCCCCTTCAGAGCCTCGAACGCCATGGTAGCCTCGTCGTC
CCAGGTGAAGGCATCGCGCCGCAGCAGGCGCGTGAGGGGCGAGGCGATGA
GGCCGAAGTCCCGGATGAACTTCCTGTAGTAGCCGGCGAGGCCCAGGAAC
CCGCGGAGGGCGCGCGGCGAGCGCGGCGTCGGCCAGGCTGCCACGGACGC
CACCTTGTCCGCATCCATCGTGACCCCGTCAGCGGTGATGACGTGGCCGA
GGTAGGCCACCGAAGTCGTCGCGAACGAGCACTTCGAGCGCTTGAGGTGA
AGGTGATGCGCTCGAAGCTCGTTGAAGACGATGGCGATATGCTGGAGGTG
CTCCGCCCACGACGTGTTGTAGATCAATATATCATCAAAAAACACCAGCA
CGAACCGGCGTAAGTACGGGCGGAGGACGTCGTTCATCAGGGCCTGAAAG
GTCGCCGGCGCGTTGGTGAGGCCGAAAGGCATCACCACGAACTCAAAGTG
GCCATGATGCGTCCGGAATGCCGTCTTGGCAATGTCCTCCGGGTGCATGC
GCACCTGGTGATAGCCCGACCGAAGATCGAGCTTGGTGAAGAACCGAGCC
CCGTGGAGCTCATCGAATAGCTCGTCGACCACCGGAATCGGGAACTTATC
CTTGAGTGTCACGGCGTTGAGGGCGCGGTAGTCAATGCAGAAGCGCCACG
TGCCATCCGACTTGCGGACAAGCAGCACCGGTGCCGAGAACGGCGACGTG
GAGATCCGGATGATGCCAGCGGCTAGCATGAGCGCACACTGACGCTCCAA
CTCGTCCTTCTGCAGCTGTGGGTAGCGGTAGGGTCGTACCGCCACCAGGG
CCGTGCCTGGCAGGAGGTGGATACGGTGGTCACATTCCCGTGGGGGCGGT
AACCCTTGCGGATCCTCGAAGATGTCGCCATGCTGCTGCAGTAGATGGGT
CAGCAGGGGGTGCTCGGCGTCGTCCTCCCCGGAGACGAGCTGTAGCTGGG
GGGCGGGAGCGGCTCCCCCGACGCCCTCCCAACGGATGCGGCGACCCTGG
CGCCAGAACGTCATCGTCAGGGCGTCGAAGTCCCAAAGGATGGGACCGAG
CGTCCGGAGAAAATCGACGCCAAGGATGAAGTCGAAACAGCCCAAGTCGA
TACCGGCGCACGTGATGGAGAAGTGCTCGTCGCCGATGGTGAGGGGCACG
TGCTGGACCAGTCCGTGGCACTGAAGGCGGTCACCGTTGGCCACGGTCAC
GCGGAGGTGATCCCCCCCGGTGGGCTGAAGGGCGAGGCGGCGCATGGTAG
CGGCGGGCATGAAATTATGAGTAGAGCCCGTGTCCAGCAACGCCACCAGG
GTCTCGCCATGAATAGTGACCGGTAGAAGCATCGTCCGCTCGTGGCGGAT
GCCGACCAGTGCGTGGAGAGAGACGACGAACGCCGTGGCGGCTGGGGGAG
CCGGCTCGGTCGGCTCCTGTGTGGCCAACGCGTCGGCCGCCTCGGGTGGC
CCGTCCCCGTCGTCCGCGTCGACCGTCTCCAGGTAGAAGAGGCGCGGGCA
CACGTGACCGGGTGCGTACGGCTCGTCGCAGTTGAAGCAAAGGCCTAGGC
GGCGACGTTCGAGCTGTTCGGCCGGTGTGAGACGGCGGAACGTGCGGGTA
GTCGCGGGGGCGGGGCTCGCTGGTCCGGTCGGTGCGGGGCGGGTGGCGGG
CGCGACCGGAGGCAGCGGACGAGTGGGGCGTCCGCCGCGGGCCGGGGGCG
CCGGTTGCACCGCCTGGGCGCGCCGCTCGTAAGCGCGCGCCAAGTGCATC
GCCGTCTGAAGGTCCTGCGGTGCCTGGAGCTCCACGTCCACGCGGATGTA
GTCGGGGAGGCCGCCGACGAAGAGCTCCGCGCGCTGCTGTCCCGTCACCC
CGGGAGCGTGGCACGCGAGGGCCTGGAAGCGGTCGGCGAAGTCCTGCACC
GTGTTGGTGAAAGGCAAGCGCCCCAGCTCCGCCAGGCGGCTGCCACGAAT
CGGGGGGCCGAAACGGAGGAGGCAGAGGTCGCGGAAACGGTCCCATGGGG
GCATGCCGCCCTCGTCCTGCTCGAGCGAGTAGTACCACGTCTGGGCGGCG
CCACGGAGGTGATACGAGGCGAGCCAGGTACGATCCGACGCGAGTGTGCG
CTGACCGCGGAAGAATTGCTCGCACTGGTTGAGCCAGTTTAGCGGGTCGT
CCACGCCGTTGTACGTGGCGAACTCGATCTTGGCGTAGCGCGGGGGAGTC
GGTGCGGCGGCGCCCTGGCCTTGGTGATCCGCGTGACCGGTGTGGGTCTC
CGCGCCGCGGGAGTAGGCCGGCGCCGGAAAGGAGGGCATCGGAGGGGTCC
CCGCGGTCGTAAAGACGGTTGGGGAGGGCCCCGGCGGGCGTGTGTAGCTC
GGAGGAGGCTCGGTCGCCGTCACCCAAGCAGGAAGCGGCGAGGGCGATGG
CGGGAACGGCACCTGCTGGATGGGGAGGCCCTGGGGGAGGACGCTGGGGG
CCGGCTGCCACGGCGTCCAGGGGTACGGCGCGGTTGGGGTCGGGGCGGGC
ACGCCCTGGGAAGGCTGCCACACCGATGTGGAGGGTAGGGTGGGGGCGGC
CGGTGGCTGAGGCGGCCCGGGCAGTCCCTGCGTCCCTTGCAGGAAGAGGC
GGATGCCCTGGACTGCGGTGGTGAGATCGCGGAGGGCCGTCGAGACCTCC
TGCTGGGAGAGGAGGGGGGCGGCGTCGGCGGCCTCTGCCATGGGCGCCGC
GACTCCCGTGGAGGGCGGCGCGGAGGTGGGCGGTTTGGGCGGCGGTGAGG
AGGTGGTGGTGGCTGGAGAAGACGACATGACCGAACGAGGACAATCTGAT
ACCAAATTGGTAGGAACAGCTTGTCTACCCGGTCTAGGGCGTAAATTATA
GGGACAGGAGAGAGCTATGCGGGCGTGGAGGCGAGGACGCCGGCGTGCTG
GCGTCGTCGCGAGGGAAGAAGGAGGCGGCGGCTGGGGTTGCAAGACCGAC
TCCTTGGGGAGTCGGCAACAAATAGATTGTTTATTGCTTAATTCTGAAAA
TCCAATTACAACTCTTATTTATAATAGAAATAGGATAATTGGGCTAAGCC
CCTAACTAGGCCTGGCCGGTGGGCCTCTGCCGGCGATAGACCAGGCCGGT
CATAACAAGTGTAGAACTAAATTGGTGGATTAATGCCGGGAGAGAACTAA
ATATACATCGATGCAGAATAATAATTCTTCAATTTAGTATAGATCTCAGA
TCTCTAACCTCTATCAACTTCGGTATGGCACAATCATCGTTCAGAATAAT
ATGGATTTCAAAAGATAAATTATCTTACTCATTGAGCTTGTTCCCCTGCA
GATCTGGTGAACATGTCGGAGATGCTGCTAAAACAGAAGCTGATTCATTC
TCAGAGCAACTACCTGGGAGGATTGATGACAATGGAAAATCACCGCTGGG
TATTCTGGTGGAGGAGAAGGACCTGGTTTCGTACCGTCACGAGTGGGAAT
CCTCTTGGGGCGGCAAGTTCGGTCTCTTCGACAACTATAGTAATCTACTT
AACCATCTGGTTCTTGCTTTGTTTATTTTTCTTCCTACTGCATGCCTCAA
CTTGATCAGTTCCCTTACTGATCCTACAAAATATAGATTAGTTCCCCAGT
AGCTACATTTTATCCTATATGTCTGAACCATAATTCGTCATTTTATATCC
GACTTCTTGACTGATTTGAAACTTTGCTGCAGCTTGTGTGAGTTCCATGC
TCTTCACATGGAGACCCACCCCACCGCATGCAGGCGTCAAAACTTGTTTG
CAGATTTTCTCCATCAGGGTCACAAAGATTGATGATCGTCTCGAGTGGCC
ACTTGAGATCTATGGCTTGGTTGCCACCCGAGACTCCATGGATCATAATC
GCAACATTATCTTCAGACGCGGAAGAGATGCTTGTCAATTTCTCACTGAA
CAGGTTTTTCTTCGTAACTCTCTTACTCTTTTTTTTTTTTGAACGGTGAA
CTCTCTTACTCATGGAGGGGAGGAGAGAAAGTTCCCACTACTTTGTTTTC
AAGTGTACCGTGTCTCGTCTAATTTAACCTTGTCTAATTTAACCTTGAAC
TACCAAAATGACTAGTGTGCTGTCTGCATCCCTCCTGCTATTGAAATGAG
AATATATAGATGTAGGAATGTTTTATCCAGCAATGGTTGTTCCAGTTTTA
CTTGTGCAAAGACATAGGTGTTAGAATCTGGTTCTTCTGAGGTTAATGTT
TATTTTCATTTATGTGGGTTGGCTATATCCTGCGTCCTTGCTTCTGGACG
CAGTTCCTTGATTTCTTAATGAGTACAGATTATGGTTGCAGGGTTCTTTG
ATGCTGACTGGCCCGACTCATGGAGTCGTGTTTACTGACCCTGTTGACAT
TGAAATTCAACTAAAAGTGAAGGGCATAACAGAGCCTGAAGATAAAGATC
TGATCTCCAAAGTGTTGGTATGCGAACGTGATTTTGGAAGTGAAAATTGT
GGCGGTGCAGGTCACCTTGTGCGTAGCACATGCTCCAGCAAGTTGTGCTC
ACTGGAGCTCACCTCCGCCCTAATTGCTGGAGCGGTTGAGGCCACCATCA
TCTCTGCCCAAGTTATCCAGGGCCAATGGCCCAAAAACTTGGGAATGCGT
GTCGTCTCTGGTACCACTGGCATAGATGAGGATTTCATACTGCTCGATGC
TCGAGACCGAAGGTTTCGGACTTATGGTGTCATACCCCTATCCAGAACCG
TTGTGTGTGTGGAACAAGATGGAGGATTGAAACTTTCTGTAGAGGCTTAT
AAGAGAAAAGGAGGTGTCTATGAAAGATCTGCCGTTACAGTCTTGAAACC
CAAGAGATTCTCTGCGAGTATTGGTGTATGCAAGCTTCCCTTCTGCACGG
TTCGGTTCACTGTCTGTTGGTCCTGCCTGGCGAATGTGGATGATATGAAG
TCCCATGGTATCTGAGCAACCAACCAACCATTTTGCCTGTCTGAAGCAGT
TTAGCTGCATCTACTTAGCGTTTCCAGTGGTATGTTAAGAGATGTAGAAC
TAGAGTATTTACGTAGTATCGCTAATAGGTCATGTTATATCTGTGACCAG
ACCAATATTCTACAAGTCATATGTTTGGTGAAGTGCCCAGACCACTATCT
GTATCTCTGTATCGTGGTTGATGAGTCATGTCAAGCTGTTCTCTATGGTA
GCATTTAAATACTGTGTGCACATGTAAATACTGTGAAACAAATGTATTGA
AATATCTTTTAATGTATAGGTTCATTTAGCTTTGTGGAACGAAT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.