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GrainGenes Sequence Report: AA043428

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Sequence
AA043428
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA043428
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ACTATACACCGTCGTGCCATAAAACCCAAAACGCCACCACCACCACCTCG
TTTCGCCGGCGGCCCTCCCCGGCGCGGCGAGCTCGCCTACCCCGTCCGCG
AGATCCGCCCGCCCCCCGCCTCCCTCTTCTCCGGACGCCGGCGCAGGTGA
GCTCCAGCCCGTCGACATCCTTTCTCCCTGGGATCCTCCCCTGCCCCACC
CTGTCCTGGAAGCCCAAACCCTAGCTGGCGCGCAGGCGGGCGGGGGCGTG
GCGGGTGGGCGTCAGGTCAGATGGAAGACACCTTGGCTAATATAAGGAAG
AAGTTGAAGAGGCAGAAGAAGGGCAAGGAGGAGGGCGATGGCGTCGCGGC
GGTGGCAGGAGAAGGGGCTGAGGGCGGCGAGGTGCTGGCCGCCCGCCAGG
AAGATCTGCACGGCGGTGATGATGATATGGGCGAGGGTGTCGCCGACGAG
GACAGCAATCTGGAGGGTGTGAATGTGGTTCCAGGGGAGGATGGCTTGAA
AGGTTCAGGTGATTTAGGGTTAGAGGACTCCCTGTCTGTGCTCTTTAGGA
AACCTGGTCGGAAATCCCGGCAGCAAGCCTCTAATAAGGAAGAAGAAGAA
GAAGGTGTTGAAGTTGCTGATTCACATAAGAAGGAAGAAGGAGGTGTTGA
AGTTGCTGATTCACATCTTGAGGAAGCTCTCGACAGCAGATCTGGTCTGG
CTTCGGATACGCCTGCCGTGGGAAAGAAAAGGCGAAGGCGTCGCACCAAG
GAAGAAATGAGGATCGCTGCGGAAAATTCTGCAAGCGCAATGGTCAGTGA
TCGACTGCTCAGGAGGTCAAAGGCGAAGCCAAAGGCTAGTCATTCTGATA
GGCGCTCTAGGGTTGGCGCTAATCAAGCTTTCGGAGAGTTAGCTTCTGAG
TCATCACCTGATCTGGAAAGGAAGTCTGTCCAGAAAGAAGAGCCGGCTGC
GGATGATGGCTTGTGTTGCGTATCATTGGGAGAAACACTTTTACAAGATG
TGGAAACAAGTAGAGTAGTGGAGGACGGATCTAGGAACTCTTCTGATGGA
GCAAGTCATCACGTTGAAGTTTCAGCTAAGGCTAGTAATTTCCTGGGCTT
AAATCCTTGCTCAGCAGGAGCACATGCCGAAATAGCACCTCACAGTGCAG
CAAATGCATCTGCTGATGGTATTTCTGATGCACAGACATGTTCCGAAACA
TTAGCAGAGGATAGAAATGCTGATGCTGATTGTTCTCAAGATAAGTCACT
GGTACCAACCATCAAAAGGAAAACTGGTCCAAAACCAAAAGAAGGCCCCA
AAAAACCTGTTAGACGAAAGGCGTTGCCTTCGGCTGTTACTAGTGATGAA
CCAGTTGAGATAGTAGAAAGTGACGTGTCGTCGAAGCAGCGACGCAAAAA
TAAAATTCTTTTGGCAAGATCTACCACTGCACAGTCTAATTCCACTCTGG
CCAAAAAGGCAGGTTGTACAGGCGACCTTAAATATGGTAATATCAAACCA
AATGCAGCTGTGCTAACAGAAGAAAACCTAGATCAGCCAGCTGCTTTTGC
AGTTCGTGGGTCCCGTGTCGCCAAGAATTCACTTCCCTCTCGTAACATGG
CAGCATCTGCAAAAGAAATAGATATTGTTGATGTGGCAGCACCATCCGAT
TTTGAGGGCATGCAGAATGCATCAAAGGTGAAACGTGCAACACGATGTGC
TAAAAAACGTAAACATGGTGACATGGCGTATGAGGGGGATGTTGATTGGG
AAACTCTAATGCAAGAGCAGGGGCTATTCTCGAATCCCTCAGCTGGATTT
GCAGATAAATCCGTCAAATCAAAAGATAAAATCAAAGCATTGGAAGTTGT
CGAGAATGGAGGTGTTGCTGCAGTAAGTGCTGGCCTGATGGCGGAGGCGG
TTTCTCCAATTGAAAAGATAAAGTTCAAGGACGTGCTAAAGCGCAAGGGT
GGCCTTCAGGACTACCTGGAGTGCAGGTATGTTTAATTCCTTTTCTTGTC
CTCTAATGTTTACTACATTCCCTAGTTTCTTTCTATGATGGTAGCTTATT
TGCACCATGCTTTGTGTGATTTACCTTGTACCATGAGTTTCATTGGCAAT
TTCTGTATTCGCTCCAGGAACATGATCTTAAGTTGCTGGAACAAGGACGT
CAAACATCTATTGGATCTTGCAGATTGTGGTCTTTCTAATGTTCCCTTGA
AAGATGATTTGCCACGTCAAACACTTATGCGGGATGTGTATCTTTTCTTA
GATCAGAATGTAAGTTGCATTGCATACTCTGTGACATCCGCTTTATTACT
TACCAAGTGATGCGTAATTCCGATTCAGTAGGGATGCCGTACCGCCTTGA
AGACTTGCTGGATAAGCTATTGAATATATTCAACATTTTATTCTTTCCAT
TTACCTTCATGCAGCTTGTATAACCTTTTTTCCTCATTACAGACTGTTGT
TTTTAGCTGTTATGTGCTATGTTAGATGCCAAAACTGGCTAAATGCTAAC
ACTCGATATTTCGTTAATTCATAGGGTTACATAAATACTGGAATTGCATC
AGCCAAGGTGTCGAAGGGTCATGGGACTCCTTGTTCTGAAGTTGTTGAAG
TAGCCAAGCTAAATGAATTATGTGAAATGAGGCCAGTCAGCGTTCAAGGT
GGCATTGATTCTGTATCTTTTCAGAATAAAGATCATGATTATGGTACTTT
TGGACCACTGACAGAAGAATCAAAGGAAAATAATGTCCCTGACACTCACT
GTGGTGCCCAAGAGCTGATACCTCACTTACAGTCCAAAGAACATGCATTT
GAAGAAAAGAATCTTGATGTATCAACTGAAGGTAGAGATGCATCACTACC
ATCCATCCATATTAGTTCAGTTGGAAACACTGAAGGCCCCAGTCTCCATC
AACCAGAAGCAGCTATCATAGAACATTCTCAAAACAACTGTGAAGTAAAT
CAAAGAGTTGAATCTGGTGGGTATTGCAAAAGGATAATCATTGTGGGAGC
TGGCCCAGCAGGTTTAACTGCGGCACGCCATTTGCGGCGTCAGGGATTTG
CTGTTACTGTTCTTGAAGCGCGCGATAGGATTGGTGGTCGTGTTTATACA
GATCGTACATCGCTTTCAGTTCCTGTCGATTTGGGTGCTAGCATTATTAC
AGGTGTGGAGGCTGATATAGCAACTGAAAGAAGGGCCGATCCATCCTCTT
TGATTTGTTCTCAGCTTGGTCTTGAACTGACCTTACTGAATAGTGCTTGC
CCTCTCTATGATGTTGTAACTGGCAACAAGGTTCCTGATGATTTGGACAA
TGATATGCAATCTGAATACAATGGTCTTGTTGATGAAATGGAACAACTTT
TTGCACAAAATGGTGAAAGTGCAATGGGTTTATCCCTTGAGGATGGGCTG
GAATATGCTCTTAGGAAGAAACGTGGAGCTCATGCTATTTCTTCCATGGG
ACATGATAATCAGTTATTAAGTATATCCAATGCAGGAGGCTTAGACATAT
CTGGAAGTGCTTCAACAGAAAAGGAGATAGCTCGTTGTGGGAAGGACGAT
AAGATAGATGTTCTCAGCCCTATTGAAAGAAGAGTTATGAACTGGCACTT
TGCACATTTGGAGTATGGTTGTGCTGCAATGCTTAACTCTGTCTCTCTTC
CATATTGGAACCAGGATGATGTGTATGGAGGGTTCGGAGGACCTCATTGT
ATGATTAAAGGTGGTTATGGCACTGTCCTTGAGAGCCTTGCAGAAGGACT
TGATGTCCAGTTAAACCATGTGGTAACTGAAGTAATTTACAGGTCTGAGG
AGTCAGATGCTAGGGGTATTGATGGCAAAACTGTGAAAGTTTCCACTTCA
AACGGAGGTGAATTTGTGGGAGATGCTGTGTTGATTACTGTTCCTCTTGG
TTGTTTGAAAGCAAATGCAATCAAATTTTCTCCTTCCTTGCCAGACTGGA
AAATGTCTTCCATTGACAGGCTTGGATTTGGTGTTCTAAATAAAATAGTA
ATGGAGTTTCCTGAGGTCTTTTGGGATGACGATATGGATTATTTTGGTGC
AACTGCAGAAGAAACTGATTTAAGGGGACAATGCTTTATGTTTTGGAATC
TCAAAAAGACAGTTGGGGCACCAGTTCTAATATCTCTACTTGTTGGGAAA
GCTGCTATAGATGGACAAAGTATCAGTTCTGATGCTCATGTTAGTAGTGC
CATGGTCGTTCTCCGTAAGCTCTTTACAGATGCTGCTATACCAGATCCAG
TCGCATCAGTTGTCACAAACTGGGGCCTTGATCCTTATAGCAGAGGTGCT
TACTCTTATGTTGCAGTAGGAGCATCAGGACAAGATTATGACATTCTGGG
ACGGCCAGTTGCAAACTGCTTATTTTTTGCTGGGGAAGCAACATGCAAAG
AGCACCCAGATACTGTTGGTGGTGCAATTTTAAGTGGTCTTCGAGAAGCA
ATTCGTATTATTGATTTGGTACACAGTGGCAAGGATTATGTTGCTGAGGT
GGAAGCTCTAAAAACATGCCAAATGCAGTCAGATAGTGAAAGAAATGAAA
TGAGAGATATGTCGAACAAACTTGAAGCACATGAACTTTCAACTGCTCTA
TGCAAAAATTCGTCTGATGCATCATATGCAGTAGTTAGCAAGGAATCTTT
ACTGCAAGAAATGTTCTTCAGTGCACAAACTACATCAGGGCGCCTACATT
TGGCTAAGGAGCTACTGAAGCTTCCTCCAAATGCTCTTAAATCATTTGCT
GGGTCTAAAGAAGGACTAACTAAACTAAACTCTTGGATACTTGTAAGTTT
GTTCTCTGGTAAACTTTGTATCCATAATAGGATAAGGTAGCTTCTCTTAC
ATTCAAGCCTTTGGCTTCTGCATTCTAATTCTGGCAGGATTCGCTGGGAA
AAAATGCGACTCAACTGTTGCGGCATTGTGTGCGCTTGCTTATGCTTGTT
TCGACTGATCTTCTAGCTGTTCGCTTGTCTGGTATGTGTCCTGTATCCCT
TTACTATTTGTTAGAAAATTCCTTTGTGTGTGTTTGTGTTTTCTTTCTTG
TTGCTCCTTTGCAAGAGTGAGAAGCTCAAGCTGCGCTTGTTTAATGAGGG
GGATTTGTTACCCAATAGTTTCTGTTTATACACCACCTTAGCTAATAGTT
AAAGCATAGGGAACAAATGTTCACACCAATGAGAATAGAGCTTATTTATG
TACTGTTATATTATAGTAATAATGCAAGGATGATTTGCCCAAACTCTGTT
TTTACAGCCTACCTGATTCTCTTCAATCTGAACTTTGTACAGGTATTGGG
AGGACCGTAAAAGAAAAGGTTTGTGTGCATACAAGTCGAGATATACGTGC
TATAGCTCGCCAGTTGGTCAGTATGTGGATAGAAGTTTTCCGTAAAGAAA
AGGCTAGCAACGGTGGACTCAAATTGCTGCGCCGAATGCCATCAGTTGAA
TCAAACAAGACTAAAAGTAAGGGTCTACAATCAGGAATGCCTACTTTGCA
TGTGACAAATGAAGCAAGTGCACAGCGTGTAAGATCTGCTGAGAGCCATT
CACCACACAGAACTAGCAAGAAGCCAGATAACAAGGCCTTGAAATTAGGA
AGCATAATGGCCACAAGGTCTGATGGCAACTCGATTCTTTCTGAGAAGCA
GCATCATGATCTCGAACCCAAGGCAGATCATGACATCGTCTTGTCCGAGG
AAGAAGCTGCTGCATTTGCTGCTGCTGAGGCTGCTCGAGCTGCTGCCATA
GCAGCTGCACAGGTTTGTTTGTAACAGTTTCTTTAGTCGGTTTATAAATT
TTAACTTCTAAGTAAAATCAGCCAAGAATATCAATTGACAAATTTATGCA
TGTTGATCTATAAAAATATGAGGTTGCAAAATAGCATTCAGGGTGCGTAT
ATGAAACTTCCTACTTTGTGATTGTGGATCCAAATAAGCAAACTCTTCTC
TCAAATATATTAAAAACCACAAGAATACCAGTATACATGGAATGCCATCT
GATATTTTATTGGTTGCTGTACATATTGTTTATACTTCTCATATTGTGCA
GGCATATGCATCTGTTGATGCAGTGATAAGTGTGCCTAGGGAACTCCCTA
AGATACCATCATTTCGTACTTTTGCAAGGCGTGATCATCATTTGGATGAA
TCTGATACAAGAAAGAAAGTGATAAGTGACAACCTTGGGAGACTTGAATG
CATATCAGAGATTGATTCCAGGAATGGAAAAACTAAGAACTCATCAGCGG
AGCAGGCCAATTGTCCTGATGTTGACAGCTCGAAAATGACAGTTGATGAC
TGCACACAGAGGAGCTATTCAAACGAGAAAACCTGCCTAATCAATATAAG
GGATAATTCTGTAGATAGTGGAGCTGTAGATAGTCGGTTTACTAGGGCAT
GGGTTGATACAGATACAATCTGCATTGATGGTGTCAAAGATCCTTTAGCC
ATTGAGAGGTGGCAAGCACAAGCAATGGAAGCAGATAAAGAATTCTACAG
TCGGATACGCATACCTGAAGAAGAAGATTCAAGTAGCCAAAAGCAGACAT
GTAAAAGTTCTGCCTCGCAGGTTGCAGAAAGCAAACCTGCATCCGAAGGA
CAATTGCGAGGTGTTGAACATATAAAACAGGGGCTTATAAATTTCATAGG
CACACTGCTGATGCCACTGTACAAGAGTAAAAAGATCGACAGGGAGGCGT
ACAAGACAATGATGCGGAAAGCTGTCACGAAGGTATCATGCGCACCCATC
TTGAACTAGTAGTATTTGAAATATCAACTTGAATAATTATTACCTCATCA
TACTCCGGTTGTAATGTTAGGGGTGTTGATATATATTGAACTATTTTTTT
CCTTGTAATACCATTTGTGTTGCTCTCTTTTGTTAGGCTTATTTCCATTA
GCCTTTTGCTATTTGTTCAGACATGCTGCATGGTGCATTAGATCTTGTAA
TGTGAGTGATAGTACTGACTCGCATATGCTTGTTCTGGTCTCAACAGATT
ATGGATGCATGCACCGAAGGAGAGAAGCTGATGACCTCTCATGAATTTCT
TGATTTTAGAAGGAAAACTAAGGTACAAGATTACTTCATAGCAAAGTTTT
TTCAGACTCTGATTTCCGGCTTTCTATCAAATTCAGTGACAGATTACGAT
TCTGTTCTTTCATTATAGTATTTTCTGTATAATTTTTGTTTATTTTAACT
GCCGAATCTTGTTCTTTAACCCTGAGTATATCGCAAATAATGCAGATTCA
ATCCTTTGTGGACAAGTTGGTCGAGAGGCATTGGCATCTGGCTCCAGCTC
CCAAATCATAACATGTGCATATCCAGGAAGCTGTTACATGTGGGGAAGCT
AAATTCTCTTTCCAGACTATGCTGTTGCTCAGCAGGCATTGGCTCCGTGT
GACCTAAAAGAACCAGACAATGTTTCATAAGCCTTGGGGGAAAAACCACC
ATGCTGCCTGTAACTCAGATTATCAAGTTGACTTTGTGGAAGACCATGAA
CCAGATTGGCACATTCATCCTTGTATTGAACTTGATATCACCGCCATCAC
CATCGTAGCAATGGGCCTTTTGAGACCAGTGAATGTTAGATCTCTGCGCA
CTTGACAAACATGGTGCGCGTGCAGCGAGCTTGTACGCCGAGTTGATATC
TATGCCTTGTACTGAAGCGACATATGAAGATCTGGGATTCAAGCATTCCA
CATGGTCTCATATGCAACGACGGCTTGTATGTATTACCGGAGAGTAGTTA
AGTCAGCTTAGCGGATTGATGTTGTTGTTTGTTCAGAGATAACTGACACC
AGAGTAGACCCCATCTTTCTCCCTTTGTTGTATAGACTATAGGTCTATAG
CTTCATATTCTGTTTCTAACAGTCATCTAACTTATAGTCGGTTATGCTAA
AATCGTCGCAGTTTGGCGGAGATGGTTGAACATCTGCGGGCTGCAGCCTT
ATGTATATCCTCAGCTGCATATACTGGGCATCATTTATGACTGCTAAGTG
GCAGATGGTGCCAAAAGAAAATCAATGCTTTTCCTCAAAAAGGCTTTTGT
TTCTTTCTGCTCTGTGTTGTTTCACTTACCAGCTGGTTCTTATTGAGCTT
TGTCTGTATTTTTACGTCATGACAAAGTGACATCATGTTCAGTTATGTTT
TTAGCCATCATTAATTTTTTCCTTTCATGGCACTCCATTACTTTCGTCTC
CGTTTTTGGTGTTTCCTTTGGCTGTCGGCATGCTTCAGTTATTTTCATGT
CATGCCTGATCTCTTGATGTTTTTGTCTATGTAATGTTTTGTTGTCGATC
TTATTCTTTCTTGTGTAACTTCTTCACACGCTTTGTTCGTCTAATGCTTT
ATAATAGATCACTGTTTCTTGCATAACTTACCCACATGCTTTGTCTGTCT
AATGCTTATTATGGACCATTGTTTCTTGCATAACTTATTCATGCTTTTGT
CCATCTAATGCTTAATTATGGATAATTGTTTCTTGCATAACTTTACTCCT
ACTCTGGCAATACCTCTGCAGGATCTTCCTGACTTTGTAGAGATGGCTAC
ACCTTGCTGGCTTATTTGCTATCTGCTCTGGCAAATATACAAGGTACATT
CCCTTTGACTGTGAATGTGAAGTCCACCTTTTGATTCTGAATATGGAGTC
TACTCTTTAGTTTTGAATATGGAAATCCACACTCTGAAATGATGTAGTAG
CTCTTTCCACGAGTTGTCGTGCATGTATGCTTATTTGTTTTTCTTCCGGT
ATTCAGATACATATCTGGATGTTAATGCAAGTCCTCTATTTCGCAGAAAT
TCAGGGAATATGCTATCTTCTCCTGTGGTGATTCATATCTGGATTCGAAA
TGGTATGTTGTAATCTGAGCTTACCCTGTGCCTTTTAATCATCCGTTAAC
ACCTTGAAACCTGTTAGTTAGAACAAATGATACATGTATATTCCTTTTCT
TTGCTACATGATTCGTGAAGAAAATTTTGACGACCATGCTTACCATCACA
GAAAATCTTGCTCCAAGACGTTAGATTGTAATGAAGTGATGAAGAAGGTT
CTGCTGGAGTGAGGCGGAGGTAGCCGGGAAAGAGTTGTGGCGGCCCCGAG
ATGGAGCTGGTGGGTGCATTGCAGATACGGAGGCAATGGAGCTATAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.