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GrainGenes Sequence Report: AA019100

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Sequence
AA019100
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA019100
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
TGCAATTCAGTCATCACAGTATGTAAACTTAAAAGACGAATACAGTTATA
CTTGTAACAAAATGACACGGACCAAACTACATACGATGCTCTCCATTCAT
CGAACCAAACATATCCTCTGTTGATCACCTCATAAGGTGTTCACATCAGA
AATATGTTTGATAGAAATCAAGTAGCATCGCCTTGTGCACTTATCGGTCT
TTTCTACAAAATCAAGTTGAACAGGCCTTATACAGAATTCAAATAAGTAA
GACCACAGTTTATGTTTCTTGTATAGGCATCCCAACATGAGCTCCTTTAC
AGCAGAAGAACCACAAACAAAAATGGACGAACAAAAGAGAAGCATCACGG
TTCTCTTCGTCGTCATGGGCACCTTAACAGGCAGACAAGCTATGAGACGC
CCATTTATCATGTAATTTATTATTCTCAGTCCTTGATTCCTCATACTGCT
GTACATACGGACTTTCTAGATAATCATCATATGATTTTCAAATAATTATC
GTGTGATATTCATTCATAGACTTGTTGAGCCCATAACTTAACCAACTGAT
CCCTCAAGCTTCAGGTTCATGAGTGCATCTACCTCCTGGGCAAACTCGTA
AGGAAGGTGCTCAAAAACAGCTCTGCAGAATCCACCGATCATGGCTGCAA
CGGCCTTTTCATGGTCTATACCTCTTTGCTGGAAATAAAATAGCTGGTCC
TCTCCAATTTTAGAAGTGCTTGCCTCATGCTCGACACGGCTACTAGTGCA
ACCAACCTGTTATCAAGAAGATCAGCTCAACATGATTACACAATGTGTTT
TCTATTAACCTACTGTACTAGTTTCAAATAAAGGGAAAACCTTTGGTTCA
TAAAAAAACAGATAGTGCACAAGGAGTTTACTGAAGAAAATAAAAATGCT
TGTAAGAAAGAAGTTTGTTAACATTTGGGCCTATACAGTATTGGACACAC
ACTGATTGCCCACAAGTTCTTAACCCAAACATGCGTGCAGCTTATGCAAG
TGGTTGTATATATAGTACTGTACTAGCATAAGGATGAGCATGCACGCCCC
ACGAATATGCGATTGCAAGGGAGCAAGATGGTTTAACAAATTTGCAGTTA
AAAACACTACACAAAGTATGAAGGTGGTGTCGCAAGAATGCATAATATGG
AACACTTTAGCGCCACTGCATAGGTAGATTTAGCATGGATGGATATAAGA
CTCTGAATGTGGATGTTATCTTTGGAGTACATTTTTTGTATATATACCTA
GAAAGATTGAAAGATGTGTGACGGGGAACACCATGAAATGAGAGTTGAAC
TAAAGTGAACTTGTCTCAATTATATGGCTCATGATGCCATACAATTATCC
AATAAAACATATATTTTGTTGTGATACTAAAGCAAAGTTTCTCTACATCT
CAGTCGCTGCAAGAATTTGTTTGGCCTACGCAAGGGCCTGATCAAGGGTA
GGGCACTCTCTCTCGCCTAGGCAGTGCAAGGATTGTGCTAGCAAGGCTCT
GCGACTTAGTTGAACTACTAATTATCCATTGCTTGATGGAAACAATAGCC
CTTAAACTCCTCACGAACCATAACGCTATCTTCCAAATTTAATTGGAGCC
TTCCTACTTCAAACAGCCCACCTGTATCCAACAAGAATACTTCTCTCAAG
ACTATCTCTATCTCTAAGCATGTGCTATCCTATGCCTTAACAGATGTTCG
CACATGAGGTTGTTTAATCACAGTCATAGGCTAAGAACAAGGTATTGCCG
TTCCCCTGGCTTGTCACGTGCCTCTATTTAGAAGAACAATGTCATAGCTA
ATGGTACCCTCAAACAACTTCACCGAAGATCCTTGGATCTCACCTTACGT
CAGCATATTTTGGTCTCAAATCATACCGACTAGGTGCCACAGAGGTCAAG
TCTATATGTGTTTCGCTACTATTGCAAGAACAATAACCACCTACAAATAA
AGTACAGGCACAGAAGCCAACAGCTCGCCCTATGACTGCAATTGAATCTT
GCATGCAAAACCAAGAACAATAAACATGTAAGCAAGAAGTGGAAGGAAGA
GAAAGTTACCTGAATAGTGGGATAGGTATTGGCAGCAGCGTTATCCCCAA
TTAGCAATGAATCACACTGAGAAGAATTATAAGCATTCTCTGCACCTGAC
ATAATCTGGACCAGCCCGCGGTAGCAATTCCTTGACTTCCCTGCCGAAAT
ACCCTTGGATATAATCCGGCTGCGTGAATTCTTCCCCTTGTGGATCATCT
TCGTCCCTGTATCTGCCTGCTGGTAATCCTTAGTCAGTGCTACCGAGTAG
AACTCTCCAACAGTGTCATCGCCATCAAGCAACACACTCGGGTACTTCCA
CGTGATTGCCGACCCTGTTTCAACCTGTGTCCATGAGATTTTCGAGCCAC
GTCCCTTGCACTTCCCCCTCTTGGTGACGAAATTGTAGATGCCCCCTTTC
CCCTCCTCATCGCCAGCATACCAATTCTGCACAGTGGAGTATTTAATCTC
GGCCGCCTCTTCGCACACAAGCTCCACCACGGCCGCATGGAGCTGGTTGT
TGTCATATGCTGGAGCAGTACAGCCTTCCAAATAGCTAACCGTGCTTCTC
TCATCGGCCACAATGAGAGTCCTCTCAAACTGCCCCGTCTCCTTGTCGTT
GATTCTGAAGTAGGTGGATATCTCCATGGGGCAAACCGTATCCTTGGGTA
CATAGCAGAAGGAGCCGTCACTGAAGACCGCAGAGTTGAGGGCAGCATAG
TAGTTGTCATGGGGCGGCACGATTTTGCCGAGGTAGCGCCTGACGAGTTC
CGGGTACTCTCGGATGGCCTCGGAGATGGAGCAAAATATGACGCCCTTGG
CCATGAGCGCCTCCCGGTGGGTGGTGGCGATGGAGGTGGAGTCGATGACG
GCATCGACGGCGACGTTGGAGAGGCGCTTCTGCTCGCCGAGAGGGATCCC
GAGGCGGTCGAAGGTCTTGAGCAGCTCGGGGTCGACCTCGTCGAGGCTGT
TGAGCTTGGGCTTGGTCTTGGGCGCGGAGTAGAAGCAGAGGGACTGGAGG
TCCACCGGCGTGTAGACGTTGTCGCTCCAGGTGGGCTCGACCATGGTGAG
GAATTGGCGGTAGGCCTTGAGGCGGAATTCCAGCATCCATGCGGGCTCCG
CCTTGAGCTCCGAGATGCGGCGGACGGTGGCCTCCGAAAGGCCCTTGGGG
ATGGAGAAGGACTCGAAGTCGGAGACGAATCCGTACTTGTACTCCCGCTT
CAGGAGGTTCTGCAGGGCCTCCGCTTCGTCCCCCGCCGCCGGGGACGCCG
GCGATGGGGAGGGCTTCTGCGGGCCCGTCTGCACGGCCACCACCGAGAGG
CGGCCGCGGCGCGCGTCGACGCGGCGGCGGGGGGCGACACCGGACGGGTA
CGCCACGCCTAGCTTGGCGGCGGTGAGGGCGCCGGGGGCGAAGAGGGAGG
TGGATGCGGAGGCGGCCATGGTGCGGCCGGCCGGAGAGGCGGAAGCGAAT
TTGGGAGGGATGGGATGAGAGGAGGAGAGAGGAGACCGTGAGATGAGAGA
GAAACGAGGGGGAGTTGTTGTTGACAGGGAGAGGGGAGCCGTGGAACGGG
CGTATGGTGCGCACGCGGCGGGCACGTGTCCACGGTGTTGGCGAGCTCGG
TCCAGGGATGGCTGGGCAGGAGGGGGAGGAGTCGTGTGGCGGCCGAGAGG
CGGAGCACGGCACCGGATGTGGTTCGTGACACGTGGCTTTTCATCATCAA
TCAAGAGAGAAAATGTCGTGATCATCTTTTGTTGGTCGAGATCGTCCAAT
TTTTCCCACCGCAAACACGACCGCGAAACAGCCTCCGGGCCCAAGCTTAG
TGGGCCGTCGAGATGCGATCCGACGTCACCCAGCTGCGGATAGAACGGAA
CGACCGCCCGGCCGGCGGCTCATGCGGGCCCAACCGCCCCCGTTAACTCG
CCTCACTCCCCGCTCCGCTTCCCGTGGCGTTCGCATCTCGTCTCGCCATG
GCCGCTTCCTCCCTGCTCCGTTCTCTCTCCCGCATCTCGCGCGCGCCCCC
GACCTCGTTCTACCACCACCGCGCCCCGTGCTCGCCGTTCTCCGCCGCGG
CGGCGGATGCAGTGGGGAGGGGGCTCGCGGGGCTGGGGCCGACGGCCAAG
GGGGAGAAGGCGCGGGTGGTGGTGCTCGGCACGGGCTGGGCAGGGTCGCG
CCTCATGAAGGACCTCGACACCACCGGGTACGACGTCGTATGCGTCTCCC
CGCGCAACCACATGGTCTTCACGCCGCTGCTCGCCTCCACCTGCGTCGGA
ACGCTCGAGTTCCGCTCCGTCGCCGAGCCGCTCGCGCGCATCCAGCCCGC
CGTCTCCAAGTCACCCGGATCCTACTTCCTCCTCGCCCGCTGCACCGGGG
TCGACCCCGACGCGCACACGGTGAGCTCCCACATTTTTTGGGTTCATCCT
GTCAAACACACGTGCGTGCGTGCGTGCGCGAAATGTGTGTTCCCAAGATT
CGGGGAGGGGACACTAGGTCTGCAAGTTGTGCTTGACTTGTTCTGCCCTG
CATAATCACATCTGAGCTGACCTTTTTGGATAGTTGGAAGGAGGAATCTT
GGCTTTACAAATCATGGTCCATAGCCTAGGTAGGGCCTTAGCTCTGTGTT
AATGGAATGAGAAAGCTATCACCAGCTCCCACTAATTATGACTTGTAACT
GTCACAGCTTTGAATTTCATTTCACTTACTTCAATTTTTTTTACAGAAAC
ACAGGAAAAGTAACTACAGGGAAATGCAGGCTTGTGTATATTTCATTAAT
CACACGACAAGTCTTCTGTTTCTACAGAAAGCATTGCTATTTGAGCAGTT
AGAGAATCTAAATTCCACTCAATTAGAAATCGGTCAGCGAATGCGAGAGG
AAGGATAAAGGGAGCCTTATTCACCGTATGCAGTTCATGTAGTAGCATTG
AGCGATGGGAATACTATAGGAATAGCTTCACAACCTTTGCTTGTTCGAAG
AGTCGGTCTAATGAATATTAACTATGCAACTTAGACCGTTCCTGTCTCTG
TTGTATGGCCTGGTGCCTAACCCTTGTGAGCAGCTCAAACACTATATGAT
AAGTTGCCCCTACCCCTAAAAAACAATTTTGAGCAGTAACACATTTATTC
ACAGGGGTTAGTGATATTGCGTGTATTTCCCGGTAACAATATAAGTGTTT
CTCTGCATATTTTTTCCATCCATTTATTCAGACTCGTTTGGCTTCAGATT
GACTGTGAGACAGTTACTGAAGGTGAGAAAGATACCTTGGAGCCATGGAA
GTTCAAGGTTTCGTACGACAAGTTGGTCTTTGGCTGTGGAGCCGAGGCAT
CAACTTTTGGAATACGTGGTGTTACTGAACATGCAACCTTTCTGCGGGAA
GTTCACCATGCTCAAGAGATTCGCAGAAAGCTCCTGCTTAATCTGATGCT
GTCTGACGTACCTGGTATGAGAGCAGCTCAACATGTTGTATTACTTCTTT
AATACCTTGTTTCTAATCACCCTTCACTGGCACAAAGTTGTCAGTTATAA
CTTTCACCTGTCGTTTGTCTCTAGATAATCAATATTTTGCATAACTCAAG
TGGATGCAGCTGCATGTACTTTTTGTTTGATGCATTTAGGATAAATCTAT
TTCATGTCTCATATGATTCATTGCCAGAATATACCTATTGTCCTCAAACC
TAATGTATATCCATTTGATTATCATCACTGACAGATTAATGGTATTTGAT
TAAACAGGAATATCAGAGAACGAAAAACGCAGACTATTGCATTGTGTTGT
TGTTGGAGGTGGTCCAACGGGGGTTGAGTTTAGTGGGGAACTAAGTGATT
TCATCGTCAGAGATGTGAAACAACGTTATTCACATGTCAAAGATTATGTC
CATGTGACCTTGATTGAGGTTTCAGTTGTAGATTTTCTAGTTTAATCCCC
ACCCTTGTTGAATTTGGGACACACATAAAACTGGTATTCACCTTCTCATT
TCAGGCAAATGAGATATTGTCATCCTTCGATGTTCGCCTCAGGCAATATG
CTATAAACCAACTAGTTAAGGTCAGTCATATTTGTCTGGTATCTTTTAGC
CATCATCAAAGTAGAACTCCAAATAAAGCATACAGGCGGTCTGATATATA
CGGCTGTAATAGCATGTGTATCATTCTCTCATATAATTTGGAATATGAAT
ATAACCTGCCCTTGTTCATCCACCAGTCAGGTGTTAAGCTTGTAAGAGGA
ATTGTGAAGGATGTACACCCTGACAAATTAATCCTGGACAATGGAGAGGA
GGTTCCTTATGGTTTGTTGGTATGGTCTACTGGGGTTGGTGCTTCATCGT
TCGTTAAGTCGTTGCCATTTCCTAAGTCACCCGGTGGAAGGTATAATTAA
TTGGTATGACCATATAATAATTTAAATACTAGTTTATTTCTGAATCTATT
GAAGTACACAAATAAGGAGGTTTTACACCAGATTCACGAAATAAATCCTC
TTGGCATACCCAATATACCGAGGTGACGCCTGTAGACTCATGTCTAAGTC
TAGGATTCTTAATAGATTGTGCATCCCTTGCAGGATCGGTGTAGATGAGT
GGCTACGTGTTCCTTCAGTTCCAGATGTGTTCGCTATTGGTGATTGCAGT
GGTTTCCTTGAAAGCACAGGCAAGGAAGTTCTTCCAGCTTTGGCTCAGGT
AATTTCACAACACAATTCAAGAATATAAGAGCATTTTTGTCAAGCTTCTG
TCTAAAAAATCGGGGCATATGCATTGTTTCCTGAAGTGCGATAGAACTGG
GTGGAATAGGAACATAGTGTAAGATTAAATTGAACAGATAGGTGTACATC
CTATCAAATTACAGAAACTGGCTGTGACATAAAACTAATTCTTTGCAGTG
CAATAGTCAGTTACACTGTTTCAAATCGATCCACATCTACGAATTCTATG
ATTTTGTTTCTTCTCTTCAGAAGAAAGGGCTACATTATGTAGTACATCAT
ATTCCGCTTGTACTTCTGAACAGGTTGCCGAACGACAAGGCAAGTACCTC
GCTGCCCTGCTCAACCATGTGATGAAATCTGGAGGAGGGCATGCAAACTC
GAAAGTGGATGTCGATCTAGGTCCCAAGTTTGTGTATAAACATCTAGGGA
GCATGGCTACTGTTGGAAGACACAAAGCTCTAGTCGACCTGAGGCAGAGC
AAGGTTGGTTGATGTTCCATTCTTTATGAACTTATTATGCAGTTCACTAG
CCGTTCCGGAGTCAACTGAGTTTCTTTTTTCTCTATTTGCAGGACTCGAA
AGGGGTATCCATTGCAGGATTTGCAAGCTGGTTCATCTGGCGCTCAGCAT
ACCTGACTCGTGTTGTCAGCTGGAGGAATAGGCTCTACGTGGCTATCAAC
TGGATGACCACGATGATATTTGGCCGTGACATCAGCCGTATCTAGGGTAT
CTATCTGTAGATCTCTGGGCTCCGAGCGCTATAAAATACACATATAGGCC
ACGCACTCCCTCATCTTTTTTTCATCCTTTTGCTCCTCTCTTTATCCCCT
TCAGACTTGTCAGCTACATGAGTTCCAAACGCACATCTTTTTCTTGTAAA
TTCTGAATAAATGAGATGAGGGTATCAATACTTGTATGCAACTATAGTTT
CTTGCTAAGGAATGAGATCAGGCTCAAGGAACTTCACTGAATGATGCAGA
ACTAATATCGGAAACACTTATATTCAGATGTACTTTAGAGAGCTCTGCTT
CCAGTTTTATTAATGTTGGTCCCCTTACTCTATTGTGCATAGGATACTGC
TGAACTTGCTCCTCGTCTACTTGTAAAACTTATTTTAGAGGATTATGAAC
ACAAGAAACCAGGCTTTACCTTCTCAAGCAAGAAAGCAACATTTCCATAT
CAAGTGGAAGTTTCTACAGAGCTTAATTATATACGACCTCTCAGTTTTTT
GTACAGAGCCTTTTGAATTAGTAGTTACACAGATTATTATTACGTTGAAT
GCACGCTTTGGCATCCAATTTACAGACAGTAAAATTTCCATTCAACAACC
ACCGTCTAATTTCCTGCACATTTGGTTTGACCAACAACTTGAATAGATTA
AAGAGGTGCAGACTCAGGAGGAAATAAACAACCATTTTGCTGGTACTATT
GTCTAGTAAACAAATGGAAGAGAAGAAACATCGTTACACTAGAACACAAC
AGGTATCACCTGAAGAAATGAAATGCAATAACTGAAATCAGCAAAGCACA
TTATGAGGCTCAATGAAACACCACAACCCAGAAGGTTCAGTTCATCCTCC
GACTCTTTTTGCGCTGCAGGGGACCGCCATATACACATCTAGAGAAGCCA
AGGCATTGCCCCTCCCCCTTCTCTTGAGGGATCTTGAAGACCCTGACTTG
CTAGGCTCTCCCGCTGTCTCAGAAATACATGTACCCCTTTGTATCACTGC
AATGGTGCTCTGAGTTTGATGATAGGTCTATAGAGGGTACTGCACCAACA
TGAGTTCTGTCAACTGTTGCCTCGGGATTCGAATGGTTTCATGACAAAGC
AGATGCTCCTTATTGACGAGGTGCAGAGCTATGAACAACACGGCCAAGAA
GGTTCAGTTCATCCTCCGCCTCTTGTTGCGCTGCGGGGGACCACCATCCA
CATCTAAAGAAGCCAAGGCATTGCTCCTTCTGCTTCTCCTGAGGGATCTC
GAAGACCCTGCATTACTAGGCTCTCCGGCTGTCTCAGAAATACCTGTGTC
CCCCTGTATCACCGCAATGGTGCTCGAGTTAGATGCTTGATCTGTAGAGG
CTACTGCACCAACATGAGTCCTGTCAACTGCTGCCTCAGGATTCAAAGGG
TTTGATGACGAAGCAGATGCTCCGTATTGACTAGACGCAGCTATCCTTCT
AAGGTCACTCATAGCAGTTGCCAACCTTTCTGTATTTGCAAAGCCAATAA
GAGTAAGTCGTTGCAGCAAATCAATTCCTTCTGGTAATGGCGGGTTCGAA
CCATGTCTGGGTGCATCTGGTGCATTATTTCCAAGCAAATCACCATCAGG
GGCAATGGAACTAACAGCAGGAGGGTTATCCAACTCACCCTGCAACCGTC
TTGCTCTCATCCTATTGGCCAATCTACTTAGTCGGCTTGTGCGTTGAGCA
ATATCTACTTCCTGCACAGCTGATTCAGGTGGGCTTTCAAATCTACTCAC
ACTGCTCATAATCTGCTGATCGAGAAGACGCCTCCATGATGACAGTATCC
CATGCGCATCACCGAGCCTTCTTGACATTGGACGTAAGTGCTGAAACTGC
TGCCTAAAACTTTCAAGCCGATTTCCATGTGGCCTTGGTGGGATTGCAGG
ACTTGGCTGCTTACCTTCTTCCATAGCCTTCTCTGCATCTGAACTGGAAT
TCCCTCTCCCATAGATAGGAGTAATATTCGCCTCCGTCACCTCGCCTTTG
CATACTGGGCATTCCTTGTGGTTGGAGTAAACATTAAGCCATTGGTACAA
GCAAGGCCAGCAGAAGAGATGGCCACAAGAAGTGACCACCGGCTCTCCGG
CCATCTCAAAGCATATGTTGCACTCGAATGTGGCAACGCTCTTGCCCCGC
TCCTCCGAGGAGTCGGAGGCACCTACTTCTGCTCCACTGACGGCTACCTT
ATTGTCTCCTGCGGTATCATTTGCTGACTCGTGATGTGGCACCGGCACTG
CTGTGTCATGCCTGACAGGCTGAGCCTCAGAGCTGAGCGGCGGAAGGTCC
GACCTAAACCGCCTGGCGCGGAGCCACCGGCTCCCTGTCTGCTCGAGCAG
CTGCCTGTACCTTGTGGCAACATCAGGCAGGAAGGAAGAGGAGGCCGTCG
ATGAAGACGGACGGTCCTCCCAGCCCAGCAGTTCGCTGGCTCGCACCAGC
GGTGGCGGGGGGTGGAAACCGAATCCGTGGTCGTCCGGGAGCTCATGGAT
GACCGGCGCCGGAGGCGGCACATAGTGTAGATGCGCGTCCTCGGGATGGA
ACGAGGAGTATACCTCCGGTGGTGGAGGAGAAAGGTCAACACGAGACGGG
GAGTACGGAGCATACGGGGGCTCCGGCGGCGGAGGGGCGTCGACTGAGGC
GGCAGAGGACGATGGCGAAGACGGCATCGGGGTGCTGAGGGCGAGGTCAG
AGCCGAGGTCGGGGCGGGGCGGGCGCGGGGCGCGGGGCGGGCCGAGGTAT
AGGTTCAGATCCATCCTCCTGCTACTTCTCGCGGCCTCATCGGCGTCCAT
CCGCCGGCGAGGCACCCCAGACCCCACCCCCGCTTCCTCCAGCTAACACC
GGGTCCCCTCCTCCCCACCTTACCATGGCAGGGCGCCGCCAGCGACAAAC
CCTATGTCGGGGCGCTGGGGCGGCGCAAGGGGGCAGCTCATCATGGATGG
ACTTGTGGTGGCGCCCCCTCTTCGGTGCTGCTCAAGAGGATTAGCTGACG
GTGGCGGTGGTTGTGGCTGTGGCAGTGGCGGTGGAAGGACGCGGCCGCGA
CGGAGGTGGGGAGGCTAGGCAGAGGCGCGGATGGAGATGGGAAGAGGCGG
AGGGGAAGGAGACGGAGAAAGGTAGCAGCAAAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.