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GrainGenes Sequence Report: AA030254

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Sequence
AA030254
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA030254
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGAGGAGAATAACCCTGTGAAGAAGAATATGGGGACGATCAACCCTCC
GGTGGAGGCGGCCAGCTTCCTCACGGACGAGCTAATCGTGGAGATCCTCT
CCCATCTCCCCTCTAGGTCCGTTCACCGCTGCAAGTGTGCACTACAACAT
GGTAGTCATTTTGGGGCACTTTGAAATACTCCTATATATGATCAAAATGC
CTCTAAAAGGCTTTAGAGGCACTTTGAAATGTGACACTAATACTCATGTC
ACTAAAAGTTTTAGGGGCACTTTGATCAAAATTCCCTAAAACACTTTAGT
GACACTAAGAGAAATGCCCTAAATCCATTTAGTGGCACTATAAAAAATGT
CTCTAAAACACTTTAGTAACACTTTTAAAAATACCCCTAAAGATAGTACT
ATCTTTTAGGATTTTAGGAGTGGGAAACGCATGGCTGTCCCTTTTCGTAG
ATGGGCAAGGCTTATCGTTTGTGCTTTGAATGGGCTGGCTAGAATCGATC
TCGTAGGTGGTTTGGCATCATGGGGTTCTAATAAACGGAAAGTTCCTTCC
CCTACCGCTCGCGCTCCCTTCGTTCGTATATAGCTGCAGGTATATAGCTG
CAGGTGGGCCATCGGTGCTGTAGGCCCAGTAACAGATTGTTGGCAACCAA
ACAGAGACGACTGTATGTATAGAAACAATCCGGGGGTCCCTTCGGGGACA
TCCGATAAAGCAATCCGGGGGTATTTAAACTGATAGTTTCGTCATTAGAT
TAGCGAGGTGGGACTAATAAACATGCATGCATGCAACGGTTGCAGGATCC
GCGCCCGCGTGCAGGCGTGGTGTATTGTGCTGAGTGTGCGCTTCGTCGAA
CCTTGCTAGTAGCCTGCGTTCACTTGCTCCGTGGATGCATGCACCACGTG
CCCGGGTAGCTCACATGCATGCGTCCCCACCTACGAGGCTACTAGCGATT
TCCTTCAGCTTGTACCATTTCCCCACACGCTATGTATGTGATATATAAGA
GCATCTTCACTCTCGGGCGATTCTAGGCCGAAATCCTGATTAAATTTTGG
CCGGACGAAACTTGAATTCGCCCTGAAAACGTCGAGTTTCTCACTTGCGT
TTTCAGACCGAGTCTCCGCGTGGCTAAATTTCAGGCGAGTTTGGCAAATT
CAGGCGGATTTCATTAAACATGGGCGGATATAGGCGGATTACATCACAGT
ACTAGATAATAAACTAAAAACATTAAAAAGGCTACCGTCGTCGCCTTCGC
CAATACCGTCGCCGCTTCTACATGACGAAGTTGCCGTAGAAGGACGTGTA
GCCGGGATCTGCCCTGCCATCGTCCTCGCCGCCGTCGTCGTCGTCGCTCG
GCGGCCGTGGAGGGCGGGAGCTCCCTGGCCGGCGTCACCGCACCTCCACG
GCTGGTATGAGGGGTCGGCTTCGTCGTCGAGGATGACGAGCGACGCGCCC
TGGTAGGCGAGAACGCGGTCAGACCAGGCCTGGCGTTTGGCCTCCTGCTG
CAGGCGGTGGACGCACCGCCGCTCCATCTCCTCCCAGTCCGCCCTGGACC
ATTCGAGTATGTATGGCGAGGACGGCTCCACCGACGGCTGCGGCGCCGCC
TCCCGGAGGGACTCCTCCATCGCCATATTGACGGCGAATGCGTCCTCGTC
GACTGGCATCGCCCAGTCCCGCGGCTCCGGGTTCGGCCGGCGAAGGCGGA
GACGGCGGTGGGCGGCGTCGGAGCGCGCGGCTCATTGATGACGATGCCAC
GCGACTTGGTCCTCGGCGGCGACCGGACCGGCGTCTCCGGCTCTCGTTTA
ACAGGCCGAAGCAGCGGCGAAGCCACCGGCGCGGAGCCTGACGAGTGGGA
GGACGAAGAGGAAAGGCTGGCCATCCTTCTTGACAGCCAGTTGGCCGAAG
GATGGTGCCTCGCCCTCGACGCTGGCGTGGGGTTGCGGGGAAAGCCGAGG
CGAGGCTCGTTGCCGACGTGGATGTGCCTCTAAGAGTAAACTACTTTTGC
ATAGTTTACTCACGAATGATAAGGATAAAATAAAATAACCAGTCTAACGG
AACAAAGTATTAGCTATTGTACAAGAAAACACCACTTCGGTGGAATAAAA
TCCTTACATAAATTTGGAACAAAATTTTTATGTCCAAAGAATATATGACA
TGCAGGTGGAACAACAATTAAAAGGAATGATTTTTAACCAAGAGGACACA
ATTTAAGATAAAGAGGAACAACGTTTTAAAATCGAGAGGACCAAAATTAG
TATTTGTGGAACAAATCAACTAGGAAAAATACTTACAAGATGGAACGATT
ATTTATTTACCAAGGAATAAAAATATAGATAAGTGGAACAAGATTACAAA
TTCAACACAGAGAGAGAGTGGTAGACCTGAGCCAAAGTACAAGGACGGCG
GGACGAGTGTCGACTGAGATTTCTATGGGTATCACAACATGAAACAACTA
AATCTCAGTGCAAAAATAATCAGATATTATTTGTTTGTATCAGCAACTTC
AAATCGTACCAATAAAATTTGGCAAACCAAACTGGGCTTAACTCAAGTAC
CAACTTTCCGCCATCAACAATTAAAAAGGGTGCCTCTGTACTAGACTGGC
CCTGCTGGGGCCTCTAAACATAAGTAATCTTAATGTTTCATATGTAATGT
CTGTTTGGTGATGTAAATGTTCAGGAATATTGAAACTACCTACATGTTGC
ATTCATAAAAGAAATCCCAAAATATTTTTTCAAAGGTAAATATAGGGGCA
CTTGGCAAAAACTTCTAAAAGTAGTATCTTTAGAGGCACTCTGATGAAAA
TGCCTCTAAAGATAGTATCTTTAGGGCACTTAGCAAAATGCATTTAAAGG
TAGTATCTTTAGGGCCACTTTGATGAAAATATCTCTAAAAATAGTATCTT
TAGAGGCACTTGCAAAATGCCTATAAAGTTAGTATCTTTAGGGACGCTTT
GATGAAAATACCTCTAAAGTTAGTATTTTTAGTGACACTTGGCAAAATGC
CTCTAAAGGTAGTATCTTTAGGGGCATTTTGATAAAAATACCTCTAAAGA
TGGTATCTTTAAGGGCACCTGACAAAAATACCCCAGATTGACATATTTAG
AGGCATTTTATATTTAGAGGCATTTTGGTGCCCCTGTCGAAAGTGCGCCT
AAAGTTATATCGTGTACTAGTGGTGTCTCCCCGTCCTGGCGCGACCTCAT
AGCCGACCCCGCCCATCGCCAGAAGCTGCCCCACACCCTCGCCGGTTTCC
CCTACAATACCTACGCCAGGACAGACCCCCGCTTCCAGGACTTTCACTTC
GCCGACGTCTCCGTCGGCGCGGCCACGCCGATCGACCCGTCGCTCCGCTT
CCTGCCACGCGACAAGTACTGGTACGTCGCCCAGCTATCCGCCTGCAATG
GCCTCCTCCTCTGCTGCGGCTACATGTCCTCTTCTTCTTCTTCCAAGGAC
GACGATGTGGTTGAATCCCGTTACATCGTGTGCAATCCGGCTACCGAGAG
GTGGGTCCACCTGCCCCCCTCACCCAAGGTGCCACCTGGCGGTCAGGTCT
GCGCTCGTTTGGCTTTTGATCCAGCAGTCTCGTCTCATTTCCACGTTCTT
CAGTTTGCGGAGACGGCTCAGAAGAATTACATCACAGGAGTGACCGTTGA
AAATATAAGCAAATTACCATAATATTTAATCCGAAATAAGTAATAATAAA
TCATGACTATAAGTGCTGGAATTAATCTAATCATGTATACTAGCAGAATA
GACGAACAAATCATATTCAACCAGAATAAGCAGATCACATCTATTCCAAG
AGCTAGTACAAGAAACTGCAACAGAAACTGAACTAGATAGAAACAGATTA
CGTACGGTGCTGGAGGAGGAATCGGGTTCGTGTTCAGGTTGGGGTTGAGG
TTCGCGTTGACACCAGTGTCGTCAGCCATGGCGTCGATGTAGAGGCTGCT
GATGTCCGGGAAGAAGTCCTCATCGGGGAAGGAGTGGTCGGTCGACGTGA
TGCCGTCAGTAGTCGCGCAGACATGCTCCCCAAAAACCTGATCGCCCCTC
ACCCGTACAGGTTCACGAGAGGCGGTGGTTCCGGAAGCCTACTGTCCCGT
CATTCGGTGCACGTCGGAAGAGGGGATGGAGAAGGTGTAGTGGCGGCGCA
AGGTTCTGGAGGCAGAGAGATGTGTATTTTCTCGTATTAGGGTTTTAGCC
TAAGGCCGTCTATATATAGGCGTCGGTCGGGTAAGACGTGGGGCGTAGCC
CACGTCCGAGTAGTAACAACCCACGTTTCCGGAAAGACCGGAAACGGCTG
ACAGAAAAATAACTCGCACATTAATTTTCCCGAGCAGCAAAAAGATAAGA
TCGGCACCGAGGCACAATTCCGCAAACCGCGGCCCGCGCGCGCGTCGTGA
CGAGGCGTGGCGAGGCGAGCGGCGGAGGAGGAGGAGCACGCGTGTATGCC
ACTCTTCTTCACTCTCTTTAGGAGGTAGTGAAACACTCCACTATATATAT
TGGTCCAACTCCCTCTAAACTAGCAAGGTGGGACTAAACTTTGGTGCCAC
CCCTTGCTAGGCATGAATGGGCCAAGAGAATTTCAGAATTTGTATTAGGC
TATGGGCCAAGGCCCACACCCAAATTCCAACAATCCCCCACAAATTCTCA
TAGGCACATCTCATCACATCACATCAATCAATTCCAGAGCATTGTTTATA
TACCGGTGCGAGGTGGAGACTGTTAAGTTGAACTTCCACTTAGAACTTCA
TGCTACACTAGATTGCAACTTGAATAGTGGACTATGCCTTGAACTACAAG
TTTGGTGCGCACTAGTTTCACATAAGGTCTAGACCGATACAGGGCTGCCG
CGAAGCTTCTCCACGGTTTGGAGCTTATGCGTCATACTCCATGGCCTTTC
ATGAGTTTATTAGAGAGCACCCAACTCTCACGGACTGCGACGTTTGACAG
TCAGACTCATATAGGTGTGTTCATCAAAAGATGTTCTGCAGGATAACATC
TTTGCTTAAACAAGCCACTCAGAACACATTAAGGTAAATACCAACCTGCC
ATGCAGAATAGGAGAGTATTGCATCTATACGGAGTGGTAGTATGTTGTAA
GGATACTATCCTCCCAGTTGACCAACAGCTTGTCTCCCAACTCTACTTCA
CGGGATCTCCGATCACATAGAGCGGGTTACCATTGTGAGCAACTCAAAAA
GTGGGTCTCAAACCCATCTCCCTCGATGCATTATCTATCACATTACGTGG
TAGACCCTTTGTGAAGGGATCTTCCAGATTTTTAGATGTTTGGATATAGT
CCAATGCAATAACTCTGGAGTTTCTCATTTTCCTGACAGATTTCAATCTC
CTCTTCACATGTCTTGATGACTTCATATTGTCCTTAGAACTGTTTATTTT
TATGATCACAGTTTGATTATCACAGTTCATAAGGATTGCGGGTATTGGTT
TTTCAACCACAGGTAAGTTCATCAAGAGTTCACGAAGCCACTCTGCTTCA
ACAGTGGCTGTGTCTAATGCTGTGAGTTTGCTTCCATAGTTGACCTTGTT
AAGATGGTCTGCTTGCAAGACTTCCAAGAAACAGCGCCACCACCAAGTGT
AAACACATAACCACTCGTGGCCTTAGTCTCATCACCATCAGAAATCCAGT
TTGAGTCACTATACCCTTCAAGTACCCTTGGATACCCGGAGTAGTGAATC
CCATAGCTCGCAGTACCTTTCAAATAACGCAAAACCCTTTCAAGGGCCTG
CCAATGAACATCTCCAGGATTTGAGACAAATCGACTTAACTTGCTTACAG
CAAAGGAGATGTCGGGCCTCGTAGCGCTGGCTAAATACATAAGCGAGCCA
ATAATCTGAGAATATCTCAGCTGATCTTTAGCATCCTTAGGATCTCCCTG
ATTCTTTCGAACCAACACGCTAGGATCGTATGGTGTAGGAGAGGATCTAC
ATTCGCTATACCCAAAACGACTCAAGATCTTTTCCACATAGTGAGACTGA
AGCAGTGTTATCCCACCATCATCATCTTTCAGCAGCTTGATGTTCAATAT
CACATCAACCACTCCTAGATCTTTCATCTCAAAACAACGAGATAGAAAGT
CTTTGACCTCATTGATAACATTAAGATTGGTCCCGAATATCAGTATATCA
TCAACATACAGACATAAGATAACTCCCTCGCCCCCACCATGGCGATAGTA
CACACACTTGTCAGCTTCGTTTACAATGAAGCCTTCATCAGTTAAAGTCC
TTTCAAACTTCTCATGCCACTGCTTAGGTGCTTGCTTAAGACCATACAGA
GACTTCAGTAACTTACACACCTTGCCTTGTTGACCATCTATCACGAATCC
ATCCGGCTGATCCATATAAATTTCCTCATCTAACTCTCCATTTAGGAAAG
CCGTCTTAACGTCCATTTGATGAACGAGAAGATCATGCGAGGCAGCCAAG
GATAGCAGTACTCGAATGGTGGTCAATCTAGCCACAGGTGAATAAGTATC
AAAGAAGTCTTCGCCTTCTTTCTGGGTATAACCCTTGGCAACAAGGCGTG
CCTTATACTTCTCAATAGTACCATCAGGTCTAAGCTTCTTCTTAAACACC
CACTTACATCCTACAGGTTTGCACCCATAAGGACGATCAGTAATTTCCCA
AGTTCCGTTTGCTATGATGGAATCCATCTCACTGCGAACGGCTTCTTTCT
AGTAGTCAGCATCTTGAGATGCATAAGCTTCTGAAATAGAAGTGGGAGTA
TCATCCACGAGGTATACAATGAAATCATCACCAAAGGACTTCGCAGTCCT
TTGTCTCTTACTTCTGGTAGGAGCTTCACTGTTATCCTCCACAGGATTAT
CAGGGTGTTCTATCGAAATGGTGGGTTCAGGAATTGTGATTAATTCTTGA
CTAGATAAACTAGGCATCTCCTGATTTGATGAACTAGACGAATCTTTCAT
GGGAAAGATGTCTTCAAAGAAAGTCGCATCATTCGACTCCATGATTGTAC
CAACATGCATGTCAGATACCTGAGATTTCACTATCAAGAATCTATAGCCA
ATGCTATGAAATGCATATCCCAAAAAGACACAATCCACGGTTTTGGTCCA
AGTTTGCGCTTCTTGGGTATCGGCACATTCACTTTCGCCGAACAACCCCA
AGTTCGTAAGTAGGAGAGTTTTAGCCTTTTCCTTTCCCATTCCTCAAATG
GAGTAATGGTTTCGTTCTTTTTGGGAACACGGTTTAGGACATGACACGCA
GTCTTTATCGCCTCCCCCCACCATTCCTTGGATAGACCCGATGTATCTAA
CATGGCGTTAACCAAATCAGTTAGAGTCCGGTTCTTTCTTTCGGCCACCC
CATTTGACTGAGATGAGTAGGGAGGCGTCCTCTCATGGATAATACCATGC
TCCGCACAAAAAGAATCAAATTCGTTGGAAAAATACTCTCCACCACGGTC
AGACCGAAGTCGCTTAATCTTTCGATCAAGTTGGTTTTCTGATTCAGCTT
TATAGATTTTGAAGTGATTAAAAGCTTTATCTTTAGATTTTAGATGATAC
ACATAACAGTATCGAGTGGAATCATCAATTAAATTCATGAAATATCGGTT
TCCACCTTTTGTCAACTCACCATTCATCTCACAAAGATCTGAATGTATTA
ATTCCAGTGGTGCCAAATCTCGTACCTCGGCAGTCTTGTGAGACTTGCGA
GGTTGCTTAGCTTGCACACATACTTGACACTTGGAACTTTTGACAGTAGT
AAATTTCGGAATTAAATTCATATCGGCAAGCCGCGTCATGCACCCAAAAT
TAATATGACAAAATCGTGAATGCCAAATATTGGATTCACTATCATTGCAA
ACATGATTAATAACTTGAGTACATAAGTCTGACAAAGATAAGCGGAACAA
GCCTCCGCACTCATAACCCTTTCCAACAAATTGTCCACACTTAGAAATTA
CAACTTTATTGGAATCAAAGACTAACTTAAAACCATCTCGACACAGAAGA
GATCCGCTGACGAGATTCTTATTGATTGAGGGAACGTGCTGCACATTCTT
CAGTTGTACGATCTTCCCCGAAGTAAACTTTAGATCCACCGTACCAACAT
CTTGAACAGAAGCACGTGAGCCGTTTCCCATCAGCACGGAGCCAGCCCGT
TCGACCTGATAAGAAGAGAACATGGAAATATCAGCACATACATGTATATT
TGCACCAGTGTCTATCCACCAATCAGGTGAATTACAAACTGAAAGAACAG
TGGGAAATATACCGTACCCAGCATCCTTCATCTCAATATCACCAAGGACA
ACATTAGCGGACTTGCCACTATTTCCATGTGAACGCTTGTCAAAGCGATT
GGGGCAGCTAGGAGCCCAATGATTAGGATCACCACATACATGGCAGGATC
CTTTCTTCTTATACTCAGTCTTCTTCTTGAAATTGGTAGTCTGTGCGGCC
TTATTTTTGCCATCAAACTTTCCTTTGTCATCAGACCTGTTCTTATTCTT
GAACTTGTGGGACTGGAAGTTGTTTTTCTGCACTACATGTGCGCTAGAAC
TTCCATCAAAGCCTCGAGGACGTGTATCTTTTGCTCTCGCCTTTTCTTCA
ACATGAAGAGATCCGATGAGATCCGAAACAGAAAACTCCTGTCTCTTATG
TTTCAGAGAGGTAGCAGAGTTCCTCCAAGAAGGAGGAAGCTTGGCAATAA
TGCCTCCGGCCACGATCTTGTCCGGTAAGTTACACTTGAACTGCTCGAGT
TCTTTGGCAAGGGACTGTATCTCATGAGCCTGATCCACGATGGGACGGTC
ATCAGTCATCTTGTAGTCATAGAATTGCTCCATGATATACAGTTCAGTGC
CAGCATCCGAAACACCAAACTTGGCGTCCAGTGCATCCCACGCATCTTTG
CCATTATCAAATGACATGTAGGTGTCAACAATGTTGTCACCAAGAATATT
GAACAAAGCCCCCATAAACATGGTGTCGACTTTCTGAAACGCTTCCTCCT
GAACAGGAGAAGGTCTCCCTCAGGTTTGCCAAGAGTGGCACTATAGCAGC
CTAGGTTTTTCAACCATAGAACTGCTCTCGTGCGCCATCTCTTATAATTG
ACACCGTCAAAAGGAGGCGGCCTTGTAGCCGCGGCTAAACCAGTTGAATT
CAGTTGCCTATAATCAGGTTTTTGGATTGTTGAAAATATAAGCAAATTAC
CATAATATTTAATCCGAAATAAGTAATAATAAATCATGACTATAAGTGCT
GGAATTAATCTAATCATGTATACTAGCAGAATAGACGAACAAATCATATT
CAACCAGAATAAGCAGATCATATCTATTCCAAGAGCTAGTACAAGAAACT
GCAACAGAAACTGAACTAGATAGGAACAGATTACGTACGGTGCTGGAGGA
GGAATCGGGTTCATGTTCAGGTTGGGGTTGAGGTTCGCGTTGACACCAGT
GTCGTCAGCCATGGCGTCGATGTAGAGGCTGCTGATGTCCGGGAAGAAGT
CCTCGTCGGGGAAGGAGTGGTCGGTCGACGTGATGCCGTCAGTAGTCGCG
CTCCCCAAAAACCTGATCGCCCCTCACCCGTACAGGTTCACGAGAGGCGG
TGGTTCCGGAGGCCTACTGTCCCGTCGTCCGGTGCACGTCGGAAGAGGGG
ATGGAGAAGGTGTAGCGACGGCGCAAGGTTCTGGAGGCAGAGAGATGTGT
ATTTTCTCGTATTAGGGTTTTAGCCTAAGGCCGTCTATATATAGGCGCCG
GTCGGGTAAGACGTGGGGCGTAGCCCACGTCCGTGTAGTAACAGCCCACG
TTTCCGGAAAGACCGGAAACGGCTGACAGAAAAATAACTCGCAGAATAAT
TTTCCCGAGCAGCAAAAAGATAAGATCGGCACAATTCCGCAAACCGCGTC
GTGACGAGGCGGGCGGCGGAGGAGGAGGAGCGCGCATGTATGCCACTCTT
CTTCACTCTCTTTAGAAGGTAGTGAAACACTCCACTATATATATTGGTTC
AACTCCCTCTAAACTAGCAAGGTGAGACTAAACTTTGGTGCCACTTCTTG
CTAGGCATGAATGGGCCAAGAGAATTTCAGAATTTGTATTAGGCTATGGG
CCAAGGCCCACACCCAAATTCCAACAGTGACCATATACTCGTCGCAAACT
AGAGACCGGAAAGCATAGAGAAAACAGGTTGCTTGAGAAAATTAGCCTGT
ACTCTGGCATTGCAAGTGTTTTCTTTCACGGTATGCTACACTTCCTTGGT
TGGCTGCGCCCCATGAAAATCGAGGTCGATGATGTGCTAGTATCAGTAGA
CATGGAGGGGCAGGTGTGGAAGACTATTCGTGTGCCGTCCGGTGGTATGA
CTTTTGGTACAATTGGATTGTCACAGGGGTGCTTGCACTATATGCTACCA
CACCCCTAACCCGTGTCGTCAAGAAAAAGAAGGAGAAGGAGGAGGAGGAT
ATATTAAAGATTATGATAGCAAAGAATGGGTAATGAAGCATCGTTTTGGC
AAGGATGAGTTGCGGACCATAACTGGGATGAAGTACAAGGTGGCTGCTAT
TCATCCAGATTGTGACACCATTTTGTTGGTTTTGTTTAGTGCTGGTACAT
TAGCATCATACGATATGCAACATCGGAGATTCCGTCGTATCCTTAATCTT
GAGAAAAACAAGGCAACGTTATCTCTACCCTATGTTCCGCTGTTCTCAGA
CTCATTAGCGGGTGCAGATGGGCAGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.