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GrainGenes Sequence Report: AA013013

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Sequence
AA013013
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA013013
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTTTATTTGGTAGTGGAGTGCATAGTTGGTGCTACTACTGTTCAACTGAG
TCAATGCAAAGTCTCCGGAGCTGTACATCGCACTAATAAATGTACCCCAT
GGCCATGTGCAGCCAGCAATAATTGAGAAGCTTTGGATCGGAGGAGCCTA
GGAGGCAGCACTGCAACCTGCAGCCAGACGCAGAGCTGAGAGCTCGCTGC
CTCGCCGGACGCCGGCGCCGCGTTGCCGGCTGAAGCAGCAGCACCACACC
AGGCCGTCGTCCACCGACAACCGCGACGACCGACGACGCGGCACCGCCGG
GACTCCAGACTCGATCTCTGCTTGTAAGTTCCAATCTTGCCTCTGCCCAA
CGATGCATATGTGCCCTTTTTGCAGTTCTGTAATCAATCCTCATGATTTT
GCTACTGAAAGCAAGATTCAACAAATTTGTTGCCAACGTGCAAACTTTGT
CTTGGATGACTCTAGGTTCTCAGATCTGAAAGGTGTTGGTCATCTTTGCG
AAAAAATGGGTTGGTTTTACCAGTTAAGAGAGCATTTTCGTCGGCAATGA
AATATTTCAAGTCGGATCTGCCATGCGCGTTTTTTCTTCTTCTTTTGGAC
AGTGGTTGTTGCCATGGTTATTGTAATGAAATTTTACTCTGTTGCTCATC
AGCATAAGTTTCTTTTTCTGACAGAAGTTTCTCCGCTGAGAGGGAGAGCA
ACAATGGCAGGGGCTCTCGTGAGTGCATCCACGGGGGCCATGGGTTCCCT
CCTCGGGAAGCTGGGAGCTATGTTGACTGATGAGTACAAGCTACTCAAGG
ATGTCCGTGGCGACATCAAGTTCCTCAAGGACGAGCTGGAGGTGATGAAC
GCATTCCTATTGAAGATGTCAGATGTAGAGGAACCTGACGAGCCAACGAA
GCTGCGTGTGACGGCAGTGCGGGAGATGTCCTATAAGATAGAGGACAACA
TCGACAAGTTCATGGTCCTCGTGGAGGAACATCAGTCCTCCTGTTCCGGG
GCTCATGGCATCAGGAAGCTCATTGAGAAATGCAACAGCTTGCTGCCAGA
CGTCAAGACCCGCCGCAAGATCGCCAAGGAGGTAAAGGACATCAAGAATC
AAATCAAGGAGGTCAGTGAAAGATTTTTAAGGTACGTACCTGCAGATCTT
GTTGTACTAGTACTACCATCAAATTTGTGACTAGTTAAGCAGATGCTTGT
ATCTGATTTGTTGCTTGATCCACCACATTAACTGAAGGTATAAGATAGAC
GAGTCCTCCTCTATGCCTGCAAAAGACAAGGTTGACCCTCGACTTCGTGC
ACTCTACAAAGATGCCACGGATCTTGTCGGAATCGATGGACCAAGAGATG
AACTTGTCAAGTGGCTGAAGGAGAAAGAGGGTGAATCACTTAGATTTGTC
TCTGTTGTTGGATATGGAGGGTTGGGCAAGACGACACTTGCCAGCCAGAT
TCGGATCAAACTTGGAGCCACCTTTGAGTGTGGGGCTTTTGTCTCCATTT
CACGCAAGCCTGACATGAAGGCAATATTAAGATCTATATTATCACAAATC
ACCAAGCAAGACAATGCTTACTCTGGATTAGATGATATACATCTCATCAT
GGACAAGATCCGAGAATTCCTTCAAAACAGAAGGTATGTATGGACAAATT
AACGTTGGTTAATTAGAATCTAAGCCTAGACTTTTGCTAATGATGTAAGA
TACAAATTCTGAGAGCATCTAAGCTCGTACCTAGTACCCTATATATGAGG
AGTTACTATATTTTGAGTTTCTTCTCCATTTGTAGCGGTGTAGATGCTCT
CAGAATTTTACTTACTGTACAAGTATATTTTAGATAATAACAGCTTTATT
GATGTTAGAGATTTTCATCAAGGTATATTATACCTAGGATGCACATGGAT
ATGACACTATTTTAGGATTTTACAATACTTGATCAGTATCACTATAAATA
TCTAATGAGATCCAATGTGTATCACTGTGTTGCAGGTACTTTATCATAAT
TGATGATATATGGGAGTCAGGAACATGGGAAACTTTGAAATGTGCGTTTG
TGAAGAATACATGTGGCAGCAGAATAATGATCACAACACGTATAGTTGAT
GTTGCCAAATCTTGTTCTCCTTCCAATGAAGATCTTGTCTATGAGATGAA
ACCACTCAGTGAAGCCGACTCAAAGAAGTTGTTTTTCAAGAGGATATTTG
GTTGTGAAGAAAGCTGCCCTAATAGCTTGAAAGAAGCTTCCATAGATATT
TTGAAAAAATGTCGTGGTCTACCTCTGGCCATCAATGCCATTTCTAGCTT
ATTGGCCACAACAAGTGAAACAAAAGAAGAGTGGGATCGGGTGCGACATT
CAATTCGCTCTTCAAATGCCAAAAATGATATAATAGAGACCATGAATTAC
ATATTATCTCTTAGTTATTTTGACCTTCCTCACCACCTGAGAAGCTGCAT
ATTGTACTTGGCTCTATTTCCTGAAGATAAATTGATTGAAAGGGTGAGGT
TGGTACTCAGATGGATTTCCGAAGGCTTTATTCATGGAAAAAGTGGACAA
GATCTCATGGAATTAGGAGAGGAATATTTTCATGAGCTTGTGAACAGAAG
TCTAATACAGCCCGAGAGGATAGGGTATGACGGCAAGGCGAAGTATTGCC
GTGTCCATGACACCATCCTTGATTTCCTCATTGCCAAGTCCTCTGAAGAG
AACTTGTGTACTGTTATGAAAAAAGAGTGCAATCCTGGTAGCATTGTTCG
TCGGATCTCTATTATGGGAACTGAGGATGAAGACATTATAGAGCAATTGG
ATTTGTCACATGCTCGGTCAATCAGTGCTTTTGGGGATATCGAACGACTG
CCATCGCTTGTGAAGTCAGAATCCCTGCGCGTGCTAGACTTGCAAAGCTG
CAAAAAGTTGGAAAATCATCATATCAAGGATATTGAAAAACTCTATCAGC
TGAGATACTTGGATATCTCTTTCACTGGAATCACGGAGCTTCCTAGGCAA
ATCGGGGAGCTACTATACCTAGAGACACTAGATGTTACATCCTATAAATT
ACTTGAGCTTCCTGAAAGCATAACTAGGCTACGCCGACTGGCACGTTTGT
TTGTTGTTCCTGATTGTAAGCTTCCAGATGGGTTGGGAAAGTTGGTAAAC
TTGCAAGAGCTTGCAGTGATTAATGCCTTGCAGTTGAAGCATGTGGAAGA
GCTCGGCAAACTGACAAATCTGAGAAAGCTGAAGATTCGCTTGCATACTG
ATGGGATAGAACACAACACATTAGTACAGTCCAAGGAAAAGCTGGTGTCC
TCTCTCTGTAAACTTGACGAATGTGGCTTCCGTTCCCTGAGTATTGATTA
TCGCATGGGAGATAAGGATGGCGAAGAGCTGTTCCTCCCTGCTCTGGGTT
GCATCCGTGAGGTTATTGTAGATGTAAAAGATATCTGCCAGATTAGCCGA
TGGCTCGCATCGCTTCCCAACCTACACATGTTGACTTTCATGAATCCGAA
GAAGATAGAACAGAAGGATTTCGATATGATTGGACTCATACCCAATCTGC
TCGAATTGTCACTTTATTTACATCAGCAGCTCATCATCAGGTGCGAAGGA
TTTCAACAGTTGCAGCGTTTTGAGGTTTCATGTGCTAGTATGGGATTTTT
AATGTTTGAACCAGGGGCTATGCCAAGGCTCAAGGAGCTTATACTCCCTG
GTTTCCAAGAAAAGCCCAAATCTGGTGCGGTCAATTTCGACTTTGGTATC
CAACACCTCTCCAGCCTTGCTCGTCTCACAGTCAGCCTATGGTGCATTGG
CTCGACGGCTGCAGAAGTAAAGGCTGCGGAGGATGCTTTGAAGAGCATGG
CCGAGGCGAACCCCAACCGTCCAACACTGGAGATGACAAGACTTCATCCG
CAGCACATGTTACAGGACGAGCCAACCATCCAACACTCGAGGGAACACTT
GCAGAAGATAGTTGGCGATGAGCATGAGAACAAACCTAACCTGCCTTGCA
TATATATGGGTGACGAACGGACCGAACAATCTCCGGAGCCAGAACGCCCT
ACCCCTTGTGCGTGCTGAAAAGCATCTTCTTGTCAGTTTATCGTGGTATC
GTAGTTACCGTAGCACCACATGTGACCATTTATATGTAGTTTGCTACTAG
CTACTTTCGCATGCGCTGCTTCCATAACTTCAAGCGACATACTAAGAAAC
TAGCTAGTGTGATGCAACTGAATGTTTTGACAACTAACGGCTACTATGTC
TGAATCTAAACTGAGAAAAAAAAAAACTGAATTTCTCGATACAAGTTGAT
CACCCGAAACAAGCAGCCGTAGAGCTGCTTAGATCAGGTGTGATCTTACC
GAGATACAGAAGAGAAGCAACTGAATTTTAGAGAGAGGATTTTGACTATT
AGAAATTTGCTGCCTATGACCAACTTGGCTGCTCTTCGTGCCACCATGAC
GAGATCACGTTCATTATATACCATCCCACCATGACGAGATCACGACGGCG
TCCTGTCCCCACCAACCGCAGCACATCGTGCGGGTTGGCGTTCCCGGCAG
ACTCTGTACCGCCGCCGACGTGCACCGTCATGCCGTTCGCCTCCACTCTG
CAGCCGCCGTGAGCTGAACTCAACTGGGGAGACTCGGCACGTTCACACCC
GTGCCGCCGGACCCGGCCGGACACACACACACACACGCGTTCAAATGTTG
AACCAATCCCTTAATATTTGGTGCACTTTGTCTTTATGAATGTGCAGAAA
TAAACTTTCTTTTTTTCTCAAAAGACGGGCAATTAAAGGATTCCTAGATC
TGAGCCGGCGGATAAGTAAGTATTATTCTCTATATAAAACGGATCGGATG
TGAAAACAAATTCTGTGCGGAAATAATTCTATCACTTGGCATGGACCAAG
TTGCTTCCGTGGTGTATGTACGTGTCGTGCACGTGTACTTTTTTTCCCGG
GTAAATATAGACCTTTATTAATCAAATGGGATTGTAGGAAGTTCAGCCTC
CAACGACTTGAAGAAGAACATCGGGGCCAGATCCGAGCCAAAAGATAGTT
CCGTGTCTTCTGCTCTTGCACAATTGGTAATGCAGTGGCTAATTTTTACT
TGACTACGGTCTACTTATACAAAATTACACTCTCTACAACCTATAAAAAA
AAAGCCTGAATCTCATCTATAATATGGAGATACTTTTACAAAATTGCAAT
CTCTAAAACCTCTAAAAAAGTCTGGATCCCATGTATAATATAGAGATACT
TTTACACAATTGCACTCTCTAAAACCTTTAAAAAGGGTCTGAATGTCATA
TATAATATATAGAGATATGGGAAACGATCCCTGACCCTTGCAGTAATTGC
CGAGACCAGTGCATAACAGTCAGCCTCTACGATAAATAGGTAGCACTCGA
GACAAGCTCGTAAAATACTTGCACAGTAGAATCCGGAATGTGTACTGTTC
ATGAGGTACTTTTTCTTTAAAGTAAAATTCATTTTATTCTTGTTTGAATT
CAAGTTACTTAATCATTGTTGTGCATTTAAGTAATTGTTTGGAACTCAAA
CAATAAAAAGGAATGTGACATCATGGCCCAAGGGTTAATAGGATTGATAA
GATATTATTATCAATAAGGTATAATTTCTTTTTTGAAAGCTTATTCGAAA
AGAACTCAAAAGTTAAGCGTGTTAAGATCAAAGCAATCTAAGGATGGGTG
ACCCATCAGAAAATTTAACCAAAAAAATGAGCAATTTGACCTGAGATTAA
GAGTGCTTGGAGTTAAAGACATTTCCTATGCAACTAAAGGGCCAAATAAT
TCAAATATTTTGAAATTTTGGAAAAAATATAAAATATATATTTTTGTTTT
TAAATTTTGGAAACAAATTCAGGGAATACCGTCGGCGCACCAAGGTGGTG
TGCGCCGATGGTAATCTAACTACCGTAGTGTACCATGGTTGTGCGCCGGC
AGTATGTTGTTACCACCGGTGATGTTCGCAACTCAACTTCGAGAACGTGC
CAACCTGCGGGAGGCCAAGTTCGTCGCCAACCTGTAGGAGAGGCACATCC
TCAGCCGTCAGGCATGAAGAGGTTATCGGAGGCGCATCCCGGGCATGTGC
GTGCGGAGGAAGCCTTCTACGCCGCGAGGGAGGCTGCAGTGGCAGGTAAG
AAGAAGGATGCCGTGAACAAGGTCAGACCGTCGACGACGAAGAAGGAGGA
CTTTAGCTCCGATTTCTCCTGGTGCAGTACGTAATGAGTACGGCTGGAAT
GACTAGTTGCAATGTAGTAGTATGAAATGTATCAATGTTTGTTGCCATGT
ATTATTTGTAATCCAAGTTTGAAATCCATGTTTGCATGTAAATTTTCCTT
TGTTTTCATCATCTGATAGTCACTGCCCTAAAATACATCATCCATAAAAG
CAAAAAATCTGTTTGGTGACCTAAAATGCTAAAACGGTTGCTCTATTTTT
TGTGCATGTCCTGTAATTTGACTGAGATTAACAGTGATTGGAGTTAAAGA
CATTTCCTATGCAATTAAAGGGTCAAATAATTCAAATATTTTGAAATTTT
GGAAAAAAAATATAAATTATACATTTTAAATTTTGGGAAAACAAATTCAG
GGAATACCGCCGGCGCACCAAAGTGGTGTGCGCCGATGGTAATATAACTA
CCGTAGTGTACCAGGTTGTGCGCTGGCAGTATGTTGTTACCACCGGTGTG
ATGGTCGCCGGCGCACGCCTGTGTGTCGGCGGTATCATTTTTTGGTGTGT
TGGTTGTAGGACTTTTCCTACTGAAATGTATCAATGTTTGTTGCTATGTA
TTATTTGTAATCCAAGTTTGAATGCTAAAACGGCTGCTCTATTTTTTTTA
CATGTTTGTAATAGGCCATTAGAGTTGCTCTTAGTGCATCTGTTGGAGCT
TGTTTTTTTCTTGACGCGGAACGCCTTATTATATAGTGCATGTTGGTGTT
GAAGAAATTTGGGCTTCTAGGAAATTTGGTAGAAGAAATTTGGGCTTCTA
CTACTAGCAAGAGACAGCCCATCACTCTCTCTCTCTCCAAGTCAACCGAA
TCCCCAGTCTCTCTTCCCGTTCGTCCAAAGCCTCAATCCCCATTTTTCAT
CTCCAATTCCTTATTCTCCGAGCAAGCTGAGAAGATTGGAGGCGCTAGAA
GCTTGGAATTTAGGAGGCAGCGCGCGGGGCACTGCAACCTGCAGCTAGTG
GCAGAGCTGAGAGCTCGCTGCCTCTCCGGACGCCGGCGCCGGATTGCCGG
CTGAAGTGAACCCAGATCGCCTCGCTGGAGCAGCCGCAAGAAGCACCACA
CCAGGCCGCCCTCCACCGACAACCGCGAAGACCGCCGGGACTCCAGACTC
GATCTTTGCTTGTAAGTTTCAATCCCTGCTGCTATACGATGCATATGTGA
CTTTTTTTTCCAGTTTTGTAGTTAAAACGATTTTTTTTTCGTAGTTTCAG
TCCTGATGGTTTTGCTACCGAAAGCAAGATTGAACAACTTAGTTGCCAAC
TGGATAACTTTGTGAAAGGTCTTGGCCATCTTTGTGAAAAAAATGGTTGA
AAACAAAAGAAACATGCAACCTTCCGCCTAGTGTTTCCGTTGCTGAAGCT
AATATTGGTTTTACTAGTTGAGAGAGCATTTTCTTCAATGAAGTATATCA
AGTTGGATCTGCGAAATAGAATAAGCGATGACCTTCTCAACCATTGTCTC
ATTACTTATGTCAGAAATTGATGTATTTCAGTTGATAAGTACTGATGCCA
TCATGTACACCTATCAAGGTTACCATGCCCTGGTGTTTTTTCTTCTTCTT
TTGGACAATGGTTATTGCCGTGGTTATTGTACTAAAAGTTTACTCTGTTG
CTGATCAGCATAAGTTTCTTTTTCTGACAGAACTTCCGCAGCTGAGAGGG
AGAGCAACAATGGCGGGGGCTCTCGTGAGTGCATCCACGGGGGTCATGGG
TTCTCTCCTGCGGAAGCTGGGAGCTATGTTGACCGATGAGTACAAGCTGC
TCAAGGGTGTCCGTGGCGACATCAAGTTCCTCAAGGACGAGCTGGAGGTG
ATGAACGCATTCCTCCTGAAGATGTCAGATGTGGAGGAACCTGACGAGCC
AACGAAGCTGCGTGTGACGACAGTGCGGGAGATGTCCTACAAGATAGAGG
ACAACATCGACAAGTTCATGGTCCTCGTGGAGGAACACCAGTCCTCGTGT
TCCGGGGCTCATGGCATCAGGAAGCTCATTGAGAAATGCAACAGCTTGCT
GCCAGACGTCAAGACCCGCCGCAAGATCGCCAAGGAGGTGAAGGACATCA
AGAACCAAATCAAGGAGGTCAGTGACAGATTTTTAAGGTACGTACCTACA
GATCTTATTGTACTGTACTACCATCAAATTTGTGACTAGTTAGCAGATGC
TTGTATCTGATTTGTTGCTTGATCCACCACATTAACTGAAGGTATAAGAT
AGATGAGTCCTCCTCTATGCCTGCAAAAGACAAGGTCGACCCTCGACTTT
GTGAACTCTACAAAGATGCCACGGATCTTGTCGGAATCGTTGGACCAAGA
GATGAACTTGTCAAGTGGCTGAACGAGAAAGAGGGTGAATCACTTAGATT
TGTCTCTGTTGTTGGATATGGAGGGTTGGGCAAGACGACACTTGCCAACC
AGATCCGAGCGACCCTGCTTGGAACGACCTTTGAGTGTGGGTCTTTTGTC
TCCATTTCACGCAAGCCTGATATGAAGGCGATATTGAGGTCTATATTGTC
ACAGATCACCAAGCAAGACACTGCTTACTCCGGATTAGATGATTTACAAC
TCATCATTGACAAGATTAGAGAAGTCCTCCAAGACAGAAGGTACGTATGT
ACAAATTAACGTTGGTTAATTAGAATCTAAGCTTAGACTTTTTCTAATGA
TGTAAGATACAAATTCTGAGAGCATCTAAGCTCGTACCTAGTGCCCTATA
TATGAGGAGTTGCTATATTTTGAGTTTCTTCCCCATTTGTAGAGGTGTAG
ATGCTCTCAGAATTTCACTTACTGTACAAGTATGTTTTAGATAATGAAAG
CTATATTCATGTTAGAAATTTTCATCAAGGTTTATTATGCCTAGGATGCA
CATGGATGTGACACTGTTTTAGGATTTAGCGATACTTGATTGGTATCACT
ATAAATATCTAATGAGCTCCAATGTGTATCACTGTGTTTCAGGTACTTTA
TCATAATTGATGATATATGGGAGTTAGGAACATGGAAAACTTTGAAATGT
GCGTTTGTCAAGAATACATGTGGCAGCAGAATAATGATCACAACACGTAT
AGTTGATGTTGCCAAATATTGTTCTCCTTCCAATGAAGATCTTGTCTATG
AGATGAAACCACTCAATGAAGCCGACTCAAAGAAGTTGTTTTTCAAGAGG
ATATTTGATTGTGAAGAAAGCTGCCCTGATAGCTTGAAAGAAGCTTCCGA
AGATATTTTGAAAAAATGCCGTGGTCTACCTCTGGCCATCAATGCCATTT
CTAGCTTGTTGGCCACAACAAGTGCAATAAGTGAAACAAAAGAGGAGTGG
GATCGGGTGCGACATTCAATTCGCTCTTCAAATGCCAAAAGTGATATAAT
AGAGACCATGAATTACATATTATCTCTTAGTTATTTTGACCTTCCCCACC
ATTTGAGAAGCTGCATATTGTACTTGGCTCTGTTTCCTGAAGACCGATTG
ATTGAAAGGGTGAGGTTGGTACGCAGATGGATTTCTGAAGGCTTTATTCA
TGGAAAAAGTGGACAAGATCTCATGAAATTAGGAGAGGAATATTTTCATG
AGCTTGTGAACAGAAGTCTAATACAGCCCGAGAGGATAGGGTATGACGGC
AAGGCGAAGTATTGCCGTGTCCATGACACCATCCTTGATTTCCTCATTGC
CAAGTCCTCTGAAGAGAAGTTGTGTACTGTTATGAAAAAAGAGTGCAATC
CTGGTAGCATTGTCCGTCGGATCTCTATTATGGGAACTGAGGATGAAGAC
ATTATAGAGCAATTGGATTTGTCACATGCTCGGTCAATCAGTGCTTTTGG
GGATATCGAACGACTGCCATCGCTTGTGAAGTCAGAATCCCTGCGCGTGC
TAGACTTGCAAAGCTGCAAAAAGTTGGAAAATCATCATATCAAGGATATT
GAAAAACTCTATCAGCTGAGATACTTGGATATCTCTTTCACTGGAATCAC
GGAGCTTCCTAGGCAAATCGGGGAGCTACTATACCTAGAGACACTAGATG
TTACATTCTCTAACGTCCGTGAGCTTCCTGAAAGCACAACTCGGCTACGC
CGACTGGCACGTTTGTTTGTTGAACCTAGGTGTAAGCTTCCAGATGGGCT
TGGAAACTTGGTAAACTTGCAAGAGCTTGACGAGATTGATGCCTTGCAGT
CAAAGCATGTGGAAGAGCTCGGCAAACTAACAAATCTGAGAAAGCTGAAG
ATTCTCTTGAATACTCATGAGATAGAACGCAACACATTAGTACAGTCCAA
GGAAAAGCTGGTGTCCTCTCTCTGTAAACTTGATGAATGCGGCCTCCGTT
CCCTGAGTATTGATTATCAGATGGGAGATAAGGATGGCGAAGAGCCGTTC
CTCCCTGCTTTGGGTTGCATCCATGAGGTTATTGTATATATAGGAGATAT
CTGCCGGGTTAGCAGATGGCTCGCATCACTTCCCAACCTACGCATGTTGA
ATTTCACCCATCTCAAGAAGATAGAACAACAGGATATCGAGATGATTGGA
ATGATGCCCAATCTGCTCGATTTGGCACTTGGTCCATGTCAAACAGATGT
TGCACGTCAGCTCATCATCAGGTGCGAAGGATTTCAACAGTTGCAGCGTT
TTGTGGTTTGCGGTGCTTGTATGGGAATTTTAATGTTTGAAGCAGGGGCT
ATGCCAAGGCTCAAGGAGCTTGAACTCCGTCGCTTCAGATACGACTTTGG
CATCCAACACCTCTCCAGCCTTGCTCGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.