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GrainGenes Sequence Report: AA027259

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Sequence
AA027259
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA027259
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGCAGGCGATGATCGCCTTGGCGGCGAGTGATGGGGCGACCGGAACGAA
GCGGCTAAAGCATTACTCCTCGGAGCAGAGCATCCTGATCGTGGGAGACG
GTGACTTCTCCTTCTCGCTGGCTCTCGCCACCGCGTTCGGCTCCGGCAGG
AACCTCGTCGCCACCTCCCTCGACTCCTACGGTTCGGCCCTTTCTTGTAC
ACACTCAAGGAGTAGTAATTTTCAGTTTGCATGCACTGAACAACAATTTT
CTCCGCATGCAAGCATTTAATTTGTTGCGTGCAAATATTCCTGCTTAATT
CTTCGACAACAGAGGAACTGAGTATCAAGTACAGCGCCGCGGTGTCGAAT
GTGAAGGAGCTGGAGAGGTTGGGCGCCACCGTTCTGCACGGCGTCGACGT
GAAGGAGATGAATGTCCACGCCGATCTGCAGCTGAGACTGTTTGATCGGA
TCGTCTTCAACTTTCCTCACGCCGGGTTCAACGGACGCGAGGACAACGTG
GATATGATCACGTATGTGCACGCACTCGATCAAGATCGATCTAACTGTGG
TCATCTTTTCTGTGCTTAAACCTTTATTATTTACATCTGGATCGATCGAC
CGATGATTTGGCTTGTACGTACTCCGTAGGTCGCACCAGGAGCTGGTGAG
GAGATTCTTCGCCACGGCGCGACACATGCTCCGGCGTCACGGCGGCGAGA
TCCACGTTACCCACAAGACCAAGCATCCGTACTCCATGTGGCGTATCGAG
CAGCTAGCGTCTGAGTCCTCGCTCACTATGCATGCTTGAGCAAGTTCCAT
TTCAAATACAAGACTACCCAGGTTACAACCACAAGAGAGGGTCTAGCTGG
AGGTGCGACGATGACTTCGCCATAGGCGATTGCGGCACCTTCAAGTTCGG
CATGCATGGATGATGTCTTTTCTTTTCTTAGCCCGGCCCGTGTGAACCTG
TGTGTGTGTGACTGGGACTGCTAGCTGCGCGGTTGCATGGCCTCGATCGT
CAGATGTTGTTGAGGCTTATATTGTGGAACGGAGGGATAGTAATGATGTA
GGGCTTTGAGCTGCCCGTATTATGATGGAAATTGCGGGAGCTTAATTATC
TAGTTTACTCCAACTGCTCTGCATGCGCCTAAATTTATTCTGGTTGGAAT
TTGTATTTTGCTTCCGAGATTTGACTGCTATGTGATGAACACATGCTTGA
ATGTGGATCTTAATACTCCTTCAAAATTGACGATCTGAATATGTGAAACC
ATGATTATTTTCTGGGTTACATACCATATCCTAAGCTACATGTGATTGTT
TACTCGAAACAGGCTTTACGTCCCACTATATTAATATAGCAAATACCTGA
TACAAAGTTCTGAACCATGTTGGGGCACAATAGCACAAGTCAAGCCCAAA
AGAAAAATAAGGGATACCATCACAAACCACCTCCCGGAGCTGCCTCCGCC
GGAGTGTCGCCCACGCAAACCACCTTCCGAGGCCGCCGCCCCGGCGTCTG
CGAGGTCGAGACCAAGACACGATAGGTAGCTCGTCGCCGGGACCAACAAG
AGCTGAAAAGTGTGCCGCTAGAACAGATTCGCCTAGATGGCAGAAGTGTA
GTCGGAAGGTGGCCACCTGCCACCCCCCAAACGCACTCCACGGCCATCGA
CAACCATCTCTAGACCCGCAACCCCGGAGACAGCCTCTGGCAGCGCCATG
GTCACTGAGGGGAGATCCATCCTCCATCGCTAGGTGCGGTCACCAACCAG
ATGCGGCAATAGGGCCAGTCAGGCCCCACAGGCCAGACTAGCCCCGTCGA
TGCGCTCCAACGCCATGTCCATCGCTGCCATCCTTTTGCAAATCCATGGC
GAAGCCCACCACAACCCTCTACATCGGAAATCCGCAAACATGCAGCTGCG
GTCTGTAGTCGGGCCCGCCCACACCCAGATCGGGCCCGCTTGGGCCTAGA
TTTGGGCCTGCAAGCCCACGCCTCCTAGCCCCACCATCTTCCACCGCCGG
CTGCTCACTCCTGAGCGCCACCAGCTCCGCACCGCGTAGCCGCGTGCTCC
AGACCGCCTCAAGGGCTGACGCCCTCCCTAGTCGAAACCACCCGGAGAAG
GCGCAACATCTCCACGAGATGGGAGAAATGAGGTCCCGTAGTCGTCGGCA
CCGCGTGGGCTTTGCCCGATGGCGCACGCCATCGACGATGGGAAGGGAGG
CTGAGGAGGGGCGCGGGGAGGTGGCGACGGCTCGCGGCCTGGTCGCCCGC
GGGGAGCGGCCGAGTCACGAGAGCATCGTTGGTTTTTTTCCTCGTGATCG
AGGCTTCGCAAAACTAGCACCCTTCCTGGTGATTGTTTACTAATCTATAC
AAAGATGTGAAAAGTACGTGTACTGTGGGATATTCTTTTATCTTGGCATT
TTTAAGTATATTTACTCTAATTTCGTATCTTTTGTCCAGCGAGACTGCAT
AGATTTAGGATCTCCCACATCACTTTTGTAGTACAAGATTTTATTAGGAT
ATAAAGCGTGCGCTTTACTACGAAATCACGATGGGCATCAGACACATCAA
CCTTAGCGATATTTGCTAGAATATCGTATATACTCCTAAGAAGCACTTCT
ATAATAAACAATACAAGGAGAAAACCAAGTTATACACTGAGTTTTAAGAT
CATCAGCTGGAGTGAAGTCAGTAGGAGGGCCGGGAATGAAATAAAGAGAC
AAAAAAAAATGAGTGATATCGTATATATATGGACAGGACGCATGGACAGT
ACTATGCGTCCCCCGGGGGATTTGTGTTTTTTATCCCCCGGGTCCCCAGC
CAACCACGTGTCCTCTTTTTGGTTCAAAATCCCGCTTTTGCTACAGACAT
ACTCGTTTTTGCTACAAATAGTCCCGCAACGTAGCAAAAACGGTTCGACC
CAGAAAATAGAAAATTAGACTGGACCTCACCGGAGAGTTCGCCGGAGACA
TCGCCGGCGACCGTGTAGCAAAAAATTTATGCTAATGTAGCAAACCCGAC
ATCGCCGGAGATCTCACCGGAGACTTTCGCCGGTAGACCTTCGCACACCG
TGTAGCAAAAAATTTATACTATTGTAGCAAAACCACAAAACTGTGGTAGC
AAAAAATAGTGCTAATGTAGCAAAAAACAATGTAGCAAAAAAACAATTTC
ACCAGAGACATTGCCAGAGACTTTCACCGGGACCCGTAGCAAAACCTATA
CGTTATTGTAGCAAAATCAGTACAAGGTTGTAGCAAAAAAATCTATAATT
TAGGAAATCCGATTTTGCCCGAGGCCTCACCGGAGAACTTGACTGTAGGT
AGCAACGCCGCTCGCCGTAGGTAGCAACGAGACCTGCAGTATGTAGCAAA
GTAGCACCCCTGCAGCAGCACCGGCTGGAGGCCCATGGCAACGCGGACAT
TGCAGCAACTGAGGAGGCAGCAGCGCCATGGAGCATGAGCGGGTGAGGGC
CAAGTGATGGCGATGGTGACCAGGACCAGGACCAGGACCACGGAGCCGCC
ATTCACCTGTAGGGCGACAGCTCTGGCCGCAAGATGGGAAGGCGGTGAAC
TCTGGCGGCACGGGAAAAGGAGAAGGCACGGCGAGCTGCAGACGGCGCAC
GGCGAGATCCGGCGGCGCTGCAAGCTGGGAGGGCGCGTGGCTCAGGGGGG
AGGGGCGCGTGACGGCAGCGGCAGCGCGCGTGGCGGTGGAGGCGGAGGTG
CGCATGGCGGCAGCGCGTGTAGGAGCTCCCATGGAGCTGTGAGAAAAAGA
GGAACGGGGGAGATGATACATGTGAGCCACGGTTTGAGGGAAAAAGTCAA
ATGAAAAGATAAGGTTGAACGGTGGGTTCTCATCGCTGCCACCAACCAGA
GGGACACGTGTCGCACGGAGCATCAGGAGGATGCGATCACGTGAATCCCC
CGGGGGAGTGGACTCATTTTCCTATATATATACACTCTTTTTCTCTATCT
TCTCACAACACAGCTGCATCGTTCATTGATGATCTTAAAAAAATGAGAGG
TGGAAATGAAAAAAAAGGAGAGCACCGAAATCAGTAGGACGGCCGAGGAA
CTAAAATATCACGTATATATATAGATGGCATTTTTTTTAATCATAGGATA
AGAGAAGATCTTGCATGTTAGGGGGGCTAGGGGCCCTGCTGGTCCCTCCC
TGCCTCCGTCACTGCTCTTTGCTAGTGTATGCACTTCCTCCTTTGCTCGC
CATTTTCTTTGTGCTGTTTATGTTACATCAACATCAAATATAGGAGATTA
TTGATCCTCTCGGTCTTACCAACCCGTACGTTAACTACCGATCATGAAAT
CATCTTGTAAATCCCACATGCTGCACATACCTAAAATCATGACACAAGTT
CATCACCTAATCATCACACGATTTCATCAAATGTCTTCACACAAAAAGAA
AATATTTACCTCCATCTAGAGTTCTAGACCGTCACTTGGCCGAACAAGTT
GCGGTAGTCTCGTCAACGGACTGAACACCTTCGGTCAGTCCGCTGCTGGC
ATGCTCTCCATTCGGCACTGATGCACACACCCACGAAGGCGATTCCTCTC
CGTGTCCTCCCACCCATCTCCCGTGCTGTGGTGCCACTGTAAGTTGCATG
CACCATAAGCACGACGCAAGGTTCAGTTTTTTTTTCTCTTTCCGCGGTCT
ACACAAAGGCTCGGTGCTAGTGGAGATTTGGTGTACATGGAAACCACTGG
TCCCTTTAAAAAAAAAAAATGAAAAGTCATATTTCTGTTCTAAAAAATTC
TGGAAATAAATCTCGGATTTATCCAGTGATGTATACCAAAAACTTGCAAA
ATATTAATTGGCAATATTGTGTATTTTGAGCTGCACAAAAATGGCAAAAC
TATAGATCTGAATTTAGTGATTTCAAAATTAAATAATATCCAAACTTTGT
CATTTTTTATTTTAAACTGATATTTTACATGTTTGTGGGATACATCATTA
GCTACTTTTAAAATTTCGTTTCACAATTTTTTTGAAACGTGTAAACATAT
TTTTGGAGATCGGGAGCAAGAAGGACTTTCCACGCACAAAACCAATTACG
GACCCTGGACCGCTCCTTTCCCCGTCCTCCATGGAAAGGCGATTACCAAT
TACGGACCCTGGACCGCTCTTTCCCCGTCCTCCATGGAAAGGCGATTTTT
GAGCCCCCGTAGGCAACCCACCTCGCCGACGCCGAATCGGCGGTCTCCTC
GCCCTCTGTCGGCCGCTTCGACGGCGGGAGGAAGAGGGAACCCTGATTCG
TGCAGTGTACATAGCGTAGGGTCACGTATGGTTTCCAGCCGGCGGCGTTG
GGGTGGAAGAGACGTGGCCGGAGTGGTTTTGCAGGTGGTGGACCTTTCCC
TCAACGGCGGAGCTCCGAGGAGTTCCGGCGTCGATCTGCTGCCTTTGTCG
AGTTTGCAGGTCTACGAAGATGTTAGGATGCCGTGGGACGGCGGATCTGG
CGTGTGAAGATCTAGCGAAAGGTACTGATGTTGTTCGGCGTGACGACGAC
GACGGCCTCCGGCGTAGATCCTTCGAGATCGGTGCTCGGCGACTTCTCGC
TGGCTTGGGGATGGTCCAGATCCAACGTGTCGAGAGGAGTATGAGCAGTG
GCGCGCCACCGACAGCGCTGCGTCGCCTCCTGTGTGGTCGAGATGCAGAA
GGGTTGGGCTGTAATTTTCTTTCTTCTAAGGGCCTTTCTGTAATCTGTCC
GAATTAATATCACCGTCTTTTACCGCAAAAAAAGGACTTTCCACGCTTCA
AGAAAAAAAAAAGATCACGTATCTGCGTCATCACCAAGCCGAATTTCAAA
TTTCAAATTAGATGCAGCAGAATCCAGCCACGTATCTGCGTCCGCGCAAA
ATCCGGCGCCACAGTGCCCGTGGCTCACTGCCGCGTAGGCCCCGTACCCA
CACGGTCCCGTGACTTTCAATGGACAAAAGGCGAACCCTTCGGCTCGCTC
GCCGGAGCGGTTTGATTGCAACTTCGGAAGTGGACCCGAGTCCACGCGTG
ACCCAAACCAGCACACAGCGGTCACTGTCGCCAGGGGCCAGCGGGGAATG
CGGCGGCCACGGCGACCGGCGAAGGCCGGACGGCGCGGCGGCGGAGGGGG
AGAGGCGCCACTGGAGGCGGGCGTGGCGGTGGGAGTGAAGGAAGCGGAGG
GGGCTGCGGTGATCGCCATCGACGGGGAAGGCTGCGAGGCGCCAGTGCTA
GGGGTTCCGGTTGTCGCGGCGGCCGGAGATGGAGGCAGGGAGGAGAAGGG
GCCACTGCGGGATGGGATTGCGGTGGGACAAAAGGACGCTCTTGATGGGG
CTCCGGTTACCGCTACCGACGGGAAGGGCGGGACGTCGGTGCAGGGGGAT
CCGGTCGTCTCCGCCGTTAACCAGCAGGCGCATGTGCCCGTGGTTGGGGA
GGTGCAGGCGATCGCTGTGAAGGGGAATGATAAGGCGGAGAAGGACGAGG
AGGGGATCAAGTGGCTCAAGCACTATTCCTCGGCGCAGAGCATACTCGTC
GTGGGGGACGGGGACTTCTCCTTCTCGCTGGCGCTCGCCACCGCGTTCGG
CTCCGGGGAGAACCTCGTCGCCACCTCCCTCGACTCCAATGGTTTGATAC
TCTTTCTGCTCTCTCTTGCTGCCTGTGATATTGGACCAGATGTGCGCTTT
TGTGTTCATGCTAGCAGTACTAGTTTGGACCATACTGCTACATTATTGGC
ATGTTGTGCCTTGGACATGGGGAATTAATGGAACCATGGCGGTTCAGGTT
GCATACTAGAATGCCCATGTGTTAATTTGAGGATTGTAAGATAGCCCAGT
ATCTTCTGCTGCTTAAAGAAGTATTTGGTGCACTTTACTCGGTTAGGAAC
TTAGCATCAAACCTACCTTAAATTGGCTTAATTTTCATTTCATTCTGTGA
TAAAGATGCTAATGCAATTAAAATGTCTTGGTGCTAATTTTACTACCTGA
TCTGTCTGGACTATGGAGAGACAAGGTGTTCGTAATTTGGTCCTACGTAT
TATACGTTGGAACATTGTTGATTTTGTTAAGCACTTCGCGTTATCTCACT
GAATCTAATTATGAGGTATGAAGGAAATTTTCAATTTGTGCGCCGTGCAG
TTTCTTACTGCTGGATATTGGCTGTCATAATCACTCTCACTGCTAGAGAT
TGTCTGTCATGAAAGGAACACATGCAGTTGTACATTGAGAATCACTGTTT
CTATTTCTAGTTTTTTTCTCCATTTTGTATTGTTGGAAACTGAACATTAC
GAACTGAGCTAGTTCAGTGCATGTTATTTGTTATGAGCATTGTTGGCTAG
TCTGTTTTATCTTTTTACTCTGAGATCCCCCTGTTTTGCTGATGGCAGAT
CTTGATGTAACGTTTGTTAGACATAGTTATGCACCTTGCAGCTCAAAACA
ACCACACCATTAGTTTACCTTTTGCAACTTCTTTGTGTCAAGGGAGGCTC
AACCACTATGACAAAATGCTCTTGGAGCAAGAAACTGAAATGAATGAGTG
AGAACATCAAGACAGCGAAAACATATCAGGCATCAGGCTAACTCAAAAAA
AATATTCTTGTATGAAGTTGTTGTATTTAAATAGTTTTTGCTCTTCCAAT
TTCTTATTTGATTCACTCCTAACACTGAAGCTCAGAGGATAATGTTGTTA
TCTTAATTTTTGTGACCATTTCTAGATCAACTTATCTGTTTTCTCTGCAT
TCTTGTTCGGAATCCTCTTGTACAGGGGCTCTAACGAGGAAGTATGGGAA
AGCTGAAGCTAATGTAACAGAATTGAAAAGATTGGGGTCCACAGTTTTGC
ATGGCGTTGATGCAAAAACAATGAAGCTTCACTCGTGTCTGAAGATGAGA
CGATTTGATCGCATTGTCTTTAATTTTCCTCATGCTGGGTTCAAAGGAAA
AGAGGATCAACTGCATGTCATCAAGTATGTGTACTAATTGTTGCGTAATT
CATCGATTACAAAATCTCCCAGTTTTCATGTGGACTGATTGTGTGATAGT
TGGTGTTCCTGAGTGTCTTTGGTCTCAGTTTGATTTTGTATCTATATGGC
TGATTCTATGTATGAGTCATCATCACCTTCGTGGTCTATCACTACAAAGT
CTGCCTCACTTTTCATCTGGGCTGATTGTATGACAGTTGATCTTCCTGAG
TGTCTTTTGTTTCAGTTTGATTTTGTATCAATAGGGCTGAAACTCTGTAT
GAATCATCGTCACGTTAGGTGGATTTACTTGGAATTTTTTTCCGTAGTTG
CATGCCACAATGCATAGAATATCTTGGAAGTCCTTTTATTATTATTATTT
TAATTATGGGCTAACGTCTGTCTATCACTGCTAAACTTAAGCATGAGATC
GCCCACATTATAGTCACATTGGTTGAAATACACTATCTATATCCTTATGA
TAAAAATAAATAGCATGTTAAATGAGTTACAGTGTTACACAGATTGTATC
AAGTCAAAATGACATTTTATCTTGTCATATAGACATAAAAGATCACATGC
AACATTTAGGTAAAGCAGAATAAACTAAGAACATTTCTATTGAATTCCTG
AACCTTCATGTAAATCTCTTTATGCATCACTTGAGATTAGTCTTTGCTAG
TTCCTTCTATTTATGTACTACCCACTGCCCACTAAGCAAAGATATTTGAT
CTATAACATGAAGTTGTTTTTGTAACTTGTAAGCAAAAGTTGTTTTTATG
CATATGATGTAAGATTGATAAGATTGTCCATAAGAAGTTAAATGTTTGTA
ATCGAATGGTAGTTAATTGATTGTTTCTTATTGAGTTCAGTTAACTACAA
AAACCTTCTCAAATTTTAATGTTTTAATATGCATTTAGGACCTTAACTTC
TTAAGTCAATTTCTCATTAACCTGTTTTTCTGACATGCAGCGCACATAAG
CAGCTGGTCCATGGGTTTTTTGCAAATGCACGGCACCTGCTTCGTCCCTA
TGGTGAAACACACATTAGCCACAAGACAGGACATCCTTACGACAGATGGG
ATATCGAACAGCTGGCCTATGATTCTTGTCTTGCTAAGGTTGGAGAAGTT
GATTTTTCTAAGGAAGATTACCTTGGTTATAACCAAAAGAGAGGAGATGG
TGCAAAGTGTGATGAACCTTTTGCCCTGGGTCCTTGCTGCACTTTCATGT
TCTGCATCGGAGACGTAAAAAAGATGAAGAAACCGCACGGAAACAGTGTT
GGTTCAGTCTCATTCCCTGGTGATGGCAAATTCTATCCTGGCATATCAGC
AGCTGGCATGAGCCCATTTGATCTGCGTCCACTTGCTCCAGCATGGCCTC
AGCCATATTTTCCTCCAGTCAACGGAGTTCACATGCCAATACCATCTGAT
CCTCAACCCTATGGAGTTGCCCCAACGCATCCAGGTTTTCCAGTCAACTT
ATATGGCAGAGAGAGGGCTCCTTACTTCCATCACCAGGGCATGGTCCAGC
AGCCAATGTGCAGAGGGCCACCACTGAATGTTTTCCCCACCCATGGCAGC
TTCCATCCACCAATGAGTAGAATCCTTCCAAATCCGGAGCAGCCTTGGTA
CCAAGAGGGACATCCAAATGAGCCACCATGGGGATGTCGCTACCCTTACT
CACCCCAAGAACACCAGAGTCTGCAAAGCGAGTATGAAATTCACAGGCAA
CAGACACTGTCCCTTCAAAGTCGCTACATGGAATCTTTTCAGAGGCGGGC
GAGGCTCGAAATGTTGATTGCACACTACGGCGGGCAGTGAAGGATCGTAC
TCGGAGGGTTTACTGGAGCAGAGAAACTCTGACCTTCCCAAGATGACGCA
GCGATTCGACATGAACTGTTTTGTGTCGAGGGTGTACAGTTTAGGGCCAT
TATTTTGCGTGGGGAACACTGACCACGATTCGAAGAACAGCACAAGCAAC
GACGCTGGGTTTTCTTTCTCCTATCTAAGTAGTTCGAGGAAATGCCCGTT
GACAGCGAAGCCTCATTTTGCAATGGAGCTGTCTTTAGGGACTGAGAAGT
GTATGCCGTTATCCCGGTTTATCACTTGTACGATGATAAGCCTGAACCTG
GAGTATGTAACTGGCCTCACTTTCCTAATCTACTACTGTCGCTTCTGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.