Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA002777

[Submit comment/correction]

Sequence	AA002777
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA002777
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGGCCGATGGGTCGCGGGGCCGTGCCGGGAGGATGTGTCACGGGTCGC CATGGTCGTGCCACCATCGCGGGCGGTGGTCTGCGTGTTCCCTCGACCGC CGCCTCACACGATGGGCAAGACTTGGGCCCGGGGTGGTAGGATTCTAGCC GCAGTGATGTCGTGCCTTCAATCGCCGGGGCTGCCAGAACAGGTCGTCGC GGTGCTACTGCGACATGGCCTGGTCTTTGATGGGCGACGGGACGCCGGCG GGGAGCTGCCTGAGATGCGGGATCTAAGGCTGGACGGGGGGCGCCGCCGA GTCGTTGAGGGGCCTGGTGTTCATCTCGGAGGCCTTTCCAAATCGTATTT GAGTTGCAGGTTCTGCCGTAAAAGTTCTACCAACCTTACAAAGAGAATGA CTGAACTTTTTACCTTCTTCATCTCTGATTTTTTTTCTTTTCTCTTAGAA ATTTCTGAATTTTTCTGGAAGTGGCCATTGTTTATAAATGTTCATACGAT ATGCTTCCTGATTTTTAAAGGTCTACAAGAGGAGCTGCTCATACGATTCA GAAGGACCAAGATCAATAACTGGTATGTAATGTTACTTCAGTATGATGTG TAGTTTCCATATAGGAAAGCTTTATAAACTGAAAGTTCTGTTATTGACTT ACTGTTAATCTAGATGCTCTTACTTTAATGGATGGGTGAATGCAGATTTT CGTATGTGTAATTTTACAAGGGCTTCGATTGGCCGGCACGCTTGATCATA GCATTCATTCACTGCACGGTTGATGCACTCATATGACCTATGCCAGGTTC TTTAATTTGCTTCTCACATAATTTGTTCTTTTATTTTGGTTGTTTGATCT TCTCTTCTGTCTTTGCTGATCTGTTTACTTTTTTAGGTCCTTATGTAGAT CGCTCTGTCGGCATGAGGTTAATCATTCCAAGCTATGAAGCATCAGGACT CCTTTTTCGACAGCGAATCTAAAATTCGATTCCCTCTAACGGTTTGGAAC AGAGCTGGCTCCGGCCATCAACTTCTTCACGAAGTATTTAAGAAGTCAAA TGGTTGGAATCTTCACAGACTGTACTATGCCTACTATTATTTACAGTTTG CATCTTTCCATCATGGATTAATCGAATTATTCAAGCAGATGAATTATTTT GGCCAACGACTCTATAGAAGGTTTGATAATTTCTTACATTTAATTCGATG TTGTGTTCTTCTATCTTGCCATGTTCTTCTACTGCAGATGGCACATTTTA ATTGCTTCAACAAAGTAGGATCGATTCCTGCCTTCGGCCCGCCGTGTTAT TCTATAGCAACACCAGAAATTTGTACATACATACAAATGTCATGACCGCT GGTATTCTCCATACAAAACTTGGGTGTTGGTTCTTGCTCCAGGTACATGT ACCAATGCTCCAGCTCTCTCCTTATTTCTCTTGGTTTCTTCTTGGTATAT TATGTCATTTGTCAAATGTTTTGGTTGCTACGGATAGATGTCTACCCATC ATATGCCCAGATCATTGTTCCTTTACTATTTTAATGTTCAGTCATATGCC CAGTTCAACTGCTCCTTTACTACTTGGATGTTCATTTCTTGGAGTCGTCC GAGTGTTAGAATTGATATGTTCTTCCCTCTTCAATTCTTAGAGTTAAACT ATCTGTACCTGACACACAATTCAGATTCTCATAGTAGATCTGATATTTAT GTACAGGCCAAGCATGAGCGATTCAGGGAGCACCACCCAGGAATTAAGGA ATACTTTTGATGGAGGGGTTAACCTCTTGGGTGGCCCGATCTTCACGGAT CTCGTGGTCAAATCGATGGGAAAGCGAGGGGAAAGGGAGAAGGTAGCGGA AGCGAACACACACCTCGCGAAGAACACGATGAACACACGCAAAACTCACA CGATACAAGGCCGATTTCTCCCGAACGGCGCCACCGGTCCGATAGAATCC TCGCAAGGAAAGATCGGTCAACATGCTCCCTCAAATCCACATCGGAGAGG GAAGAACACCTTGGGGAGGGTCTTGACAACTTGGAGACGAGACATCGAAC TCCAAGGCCTTGTTCAACGATGGATGCGTGATGCAAAGTCCAATCGAGGT TGGTGACGATAGTCGGTCCCCTTGGTAAAGGGGATGAGGCAAAACTAGAG ATTCCACAATGGGGGTTTTCTTTAGTCTATCATCTATGCCTAAGGGATAC ATGAGGGGTGGGGGCTCTATTTGTAGGCCAACCACTAAACAAGGGTAGTT TGGGGATAAAACTAGGGTTTGGACGAGCTAAAGGGGTACATGGGCCGAAG GCCCAACAGGTGCGCGCAGGCACACATGACCGGTAGTACCGGACTTGGGA CCGGTAGTACCGGTCAACACCGGTAGTACCGCTCTGGGACCGGTAGTACC GCTTGCGGTCTTGGAGCGTCAGCTGGAGCCGTCTGTAGCGAGCGGTATCA GGGGACGGTAGTACCGCTGACCGGTAGTACCGGGTCTAGATCCGGTAGTA CCGCTTGCAGTCCTGGGGCTTCTGTTGGCGTCTTCTGTAGGGGCGGTAGT AGGGGGCGGTAGTACCGGTCGCCAGATCCGGTAGTACCGCTGAAGACAGA GAGCATTTGGCGATCTGCCTTCTTCCGCCTCCTCTTCCAAGCCTCCGTCT TGTCGGGCTTGATGCTTCGGGCTTCCTCCCTTGCCTCCGTACTTGTCAAT GTGAACCTATCATGCATATGTGACGGAGTATGAAGTAGCATACCATTCAA TAGGGTAGGAAGGGAGCTCGCATAGAGGAACGGATTCACCTTTGGAGTCC ATAACGACTTGGCGTAAGTTGGAGACAAAGATGTGGTAACGACCGTAGGT CGGGCTACATCAGCTCCCCCCCTTCAAAAAGAGTCGTCCTCGACTCTACA TGCTCATCACAAAGTAGAAGCGGTCGAGAGACCTTCTTGATCCTGGGGTT CACCATATAGTCGTCCTCGAGAATATTGACTTGACAACACTTCAAAGTTA CTTCACCTTCCATGAAGCCTACAAAGCTCACAACAAAAGCGAAGCAACAC TCAAAGCGTAGCCAATTCATGAAGATTATAGCATGAGTCCTCAAGTGGAA GGAAGTCACCTTAGGTTGTAGAGATAGCTCGATGAAGGGTAGCCATAGGT AACTCTCTTCCTTTCTTCTTGTCAACACATGGTTGGTAGAGGTTGACGTG AATGCACTTGTACCTTCATATAACAAAGACCAAGCAACATATGTTTGTGT GTGATAGAGGAGCATGTCATTTGTGGCATGTCCATTCTTGATCACCACAC GATTAGCACAACTCAAGTATAGAAAACGGGATGCATATGCAAGGTCAATG CGCATGGAAATCGTTTGAACATCATCCAAATGTGGGAACTCAAAAACTCC ATATAATATAGTAGGGTGGCACGCAAAGCAATTGACTAAGATATATATCA ACATCTTTGATGCAAGAATAGGAGAATTTGGCAAAAACACACGAGGAATC ATATCCAAAACAAAAGCATTATGTGTGCAAACCAACCATTGGAAAGATAA TTTGCTCAATATGTTGGATGCCATACACATATCATCGATAGCAAATATCA TGGGAATATGAGTATCCCAAGCGGAAGCAAAAACAACGTGTTTGCAAACA AACCAAATGAAAGAGCAAGTGGTCCTTATGTTTGTTGCAACAACAAGACG AGATTCTTGGAAGCTCTCATGACAATACATGCTCTTAGTGGAATTGTGGT TGCACACAAAACATCGGAGAGAGAAATTGTTCAACAATTTTGTTACAACA CACAAAACATCATTATCTAAATGCGAAGAAACATGAATGTCACAAGGGGA GATAATACCATTAACATGCTTGCAATCAAACCATAGGAAAGAGCAATTTG CCAACATGAAAGATGCAAAGCATGCAAAAGGTATCAGAGCTGGGTTCGAT CTTGAACTCACTTATGGGATGCTCTCTAGAGCTCCTTTTGTCAACTCGTG CTCAACCGAGGTTGACATTCTCGTGCGGGTACCTACACACATCATATGTA AAAGGAAGAACGTGTGTGCATGGTAGAGATACACATCATCCATCATGACG TATCTCTTCTTATGCACATCACCATTAATGTCATTCAAGTATAAAATAGA TGCATGGTGAGTATGCAAGTGGGGAACATGCTTATCATGGCAATCATCAA AATCTCCAAAAATTGAGAAAGCTATGGGGGCCATCTCATTATAACGCATA TGATCAATATTGTTGCAAGCAAAACAAGTGAAATAGCAAGCATTCATCTT ATTGCAAGCAACGGGAGAAATTGAATGACTAGCATGACAAGGCAAGTCCA AAGCAATTGGAGGATACACACAAGATGCATAGCATGGCATGTTTATGGCA ATGATATTGCAATCAAACAATTCCACATGATCAATATTATGCAAAGGCAA ATCATCACATGGGAAAGTGGATGAAGCATATGTAATGTCACAAGTATCAT CCATAGCATGCATATCCTCACAATTCATCATGTCCACCAGTGGGATCATG GCATCATCAACACCCTTATTGTTACCTTGTTCATACCTCTCATATGAAGT GGGTGTTGTGGAAGTAGTGGCCTCCTTGTGGACGACTTCATGTTCTTGAT GTATCCATGGCGTAGCATCTACCATGTACATCTTCTCCATTCGAGGCATT ATTGGTTTATAGCTTCGGGCGTCTTCCTCCATGGAACCTAGCACAACACA AGAGAACACACTAGAGGTAGAGGGTAAGTTGTTAGAAATTGAAATGGTCT CACTTGACCTATCAACTACCACTCTCAACTCACTAGGAGTATCACTCATG CCCTCCAAGTGGAAGCACTCAATCTCACATAAGGTGGAGTCACTCATCTC ACTCTTGTTCTCACTCAAGTGGGCTAAGTGGCTCTCATACTCACATGGGA TTGGTACCACATCATCACTCAAGCATATGGGGATAGGCTCGGTTTCCTCA ACTCCATGCGCCTCCTTTGGTGAAGGGAAAATCCCATGCTCACCATTCTT GACCTTGTCGCCTTCAAAGTTGGATGCCATAAGATGGGCATCATTGCTTG CCTCCATGGTCGAAGGGAAAATCCCATGCTCGACCGTCTTGTGGCCATCT TGTAGTAGTGGTGGAGGTAGGCTCATGCTATCCAACTTGGCGAAGTAGAG GTTTACATTTTCCTCGTTCATGAGGTCTTCAAATGCAAGCGTAGTCGTTG AAGCTTGATGGCGTGGACGAAGGCTTGCTCTTGGTGCCATTTTGGTGGTG GCACAAGAAGTTGAAGGTGCCTTGTGATGGTCTCGACGGAGGTCATTGGC GTGCCTTGCCGATGGTTGATGTAGGTGGCGCACTTGGTCATCCATATGAC GCTCACGACGATGGCCCTTGACCTTGGCACTCTTCCTTGTAAGTTTTTCT AATGAGCGCAAAGCATCATTAGTCTTGGCGACCATCCTCATGTTTTTGTC GAAGTCGTTGTCCATGTCCTTCTTGAAGTTGTGGAGGTCGCTTTGGAACT TGTCCATTTGATGATGGACCTTGGCGCACTCGAGTTGGAGGCTCCGTCTT GGTCGGTGCGACTTGAGGAGCTTGTCGTTGTCGTTCTTGAAGTCGCCCAT GCTTGGGGAGTCGTTGTTGTTGTAGCACTTCATGTCACCCAAGCATGTGG AGCCATTGTTGGTGTAGTTCTCCATCATGTTATCCATGCTTGTGGAGACA TAGGCATGGTGGCTCATCGTAGATTCTTCATAGAAATAATCCTCGGTTCC GGAGTCCCTAGACATGATTCACAAGACCAAGCGGTGTATATGGAAGTGGT AGAGGGTGTTAGGGATACAACGTCAAACCTTAATTTACCTTGGAAGATCG TATCGTGCAAGTGGCCACACTTGAGAGCAATAAACCAAGCAAAGTGAAGT TCACGCGGAACACCAAAACCAACTATTAACCAAAAAACACACACATACAA GGCCTATGGTGGATAGGTATGGAAAGTGGCATGTCAAGAACCAATCCGAA ATCAAGATGTTGTATTGGCAAGTAAAGAACCACAATGATCACAAAGCAAA CAAGTCAATCCACAAGATAGGAAATATGTACAAGAAAACACACACGGTGG GATAAATGGGACTTGTGCGACGGAGAAAGTGAGATAAGAACCAAATGATT ACCTAGCGAAGACTATAAGCTCGTGTCACCCAAGTACAAGGAGAGACGCT AGTTCGATTGCACAAAATTGGTAGGCTACAAGATATGCACAATAAGTACC ACCTATATGATGTTCATCGAGCTTGCGCTTCCTATTCTATGAGGCACATG TATATTTATTTATTTTTCTCTTTTCCTTTTTCTATTTTTTTCTTTCTATT TTTGTTTTCACTTGCCTCTTCCTTGTGCCAACAACTATACAAGATTACTA TATGAGATAGCGCCCACAATTTTTGCTCGGAATCTACAAGGTATCAAATG TGCATAGCCCAAGCAATCATAAGAGGAACTAGTCTCAATAGGTGTTTGTT GCTCGCAAAGATAGTGGGGTTCACAAAGGAATGCAAGTGGGGAGAAGTCG CGGAATGTTTATACCTTTCATCGATGATCTTCACCCTTTATTGTTGGATT CCGCCTTGCTCACGGAATTTGGATGGAGTAGATAGCATGAACAACGTGGA TGATGATGTAGAGCTCCTTCTCCTCTTTGAAACGAGCTAAAGAACACCGA AATCCGAGTTCGAATGCAAAAGTTATGCTCAAAACGGTGAGAGGCTGAAA TCTAGAAACCTGCTGTTTTCTTTCTGTCCTGGGCGGTAGTACCGGATTTT TGGAGCGGTAGTACTGGTGAGCGGTAGTACCGGATATTTTGAGCGGTAGT ACCGCTGGAGACAGAGACGCCCAGATCTGACGCGTTTTCGCGATTTTGGG GCAATTTGGGCGGAAAATCTTCAAGAAAAACACCAAATCGACGGGGGAAA TCAAGGAATTAGGCTATGGGAATGCAAAGGAAGGTAGATCAATAAAGTTT AGCAAGTAATCCACGGATCAAAACCTACCAAAACGCACTCAAATCACAGA TTGATCCAAAACACGAATTGGGGCTATTTTTTGTGGAATTTTCGAATTTG TGGGGAAAAGACCAAATCGATGAGAAATCTGTGGCAACCAAAAGCTGCTG ATACCAGATGATGGAGGGGTTAACCTCTTGGGTGGCCCGATCTTCACGGA TCTCGTGGTCAAATCGATGGGAAAGCGAGGGGAAAGGGAGAAGGTAGCGG AAGCGAACACACACCTCGCGAAGAACACGATGAACACACGCAAAACTCAC ACGATACAAGGCTGATTTCTCCCGAACGGCGGCCACCGGTACGATAGAAT CCTCGCAAGGAAAGATCGGTCAACGTGCTCCCTCAAATCCACATCGGAGA GGGAAGAACACCTTGGGGAGGGTCTTGACAACTTGGAGACGAGACATCGA ACTCCAAGGCCTTGTTCAACGATGGATGCGTGATGCAAAGTCCAATCGAG GTTGGTGACGATAGTCGGTCCCCTTGGTAAAGGGGATGAGGCAAAACTAG AGATTCCACAATGGGGGTTTTCTTTAGTCTATCATCTATGCCTAAGGGAT ACATGAGGGGTGGGGGCTCTATTTATAGGCCAACCACTAAACAAGGGTAG TTTGGGGATAAAACTAGGGTTTGGACGAGCTAAAGGGGTACATGGGCCGA CGGCCCAACAGGTGCGCGCAGGCACACATGATCGGTAGTACCGGACTTGG GACCGATAGTACCGGTCAACACCGTCAGTACCGCTCTGGGACCGGTAGTA CCGCTTGCGGTCCTGGAGCGTCAGCTGGAGCCGTCTGTAGCGAGCGGTAT TAGGGGACGGTACACCGCTGACCGGTAGTACCGGGTCCAGATCCGGTAGT ACCGCTTGCAGTCCTAGGGCTTCTGTTGGCGTCGTCTGTAGGGGCGGTAG TAGGGGGCGGTAGCACCGCTGGCCGGTAGTACCGGTCGCCAGATCCGGTA GTACCGCTAAAGACAGAGAGCATTTGGCGATCTGCCTTCTTCCGCCGTCT CTTCCAAGCCTCCGTCTTGTCGGGCTTGATGCTCCGGGCTTCCTCCCTTG CCTCCGTACTTGTCAATGTGAACCTATCATGCATATGTGACGAAGTATGA AGTAGCATACCATTCAATAGGGTAGGAAGGGGGCTTGCATAGAGGAACGG ATTCACCTTTGGAGTCCATGACGACTTGGCGTAAGTTGGAGACGAAGATG TGGTAACGACCGTAGGTCGGGCTACATCAACTTTTCGAGTGATGCTCAGA AAATTTGGCGACCTTGCGCTCACATCTGTGGTTGAACCCCTCTCTCAGTT TCAGTGCTATGCAGCTGATACAGTAATTCAGTATACTGCAGACAACCTTG CTATATCCAGGGATATGAGCAGTCACTAGTCACTTATGTATCGATGACAA GATTGGTGTCTCTTCTCCTTGACGTAGAGAGACACTACGAGCTTATTTAT AAGTAAATTTTTCCTCCTAATCTTACCACTTACACTATAAATACATTGCA AACAGAACCTGCAACCCAAGGCCCATGAAGAGGATCCCAAGCAGCCATTC TATGTCTTCCACGAAGCTCATGGAGCTAGGCAGCACAGAGGAAGAAGAGG ACTTAAAATTTCCCCTCACGAGAAAGACGACGCATCACTTCGGGATGACA ATGCGGCTGATCACACTCCTTAGCTTCTATTTATCCCACAACATGCATGA CGGGCTTAAAAGGCTTGAATTCTGTCCACGCATATTACACTATAGCACTA CTTATCAACAACGGTGCGCCCTAGCATCTGTCATACATAAGAGCGCGGCG CGCGGCGCGCCGCGGCTAATTCCCTAGCCCTATATATTAAGAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.