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GrainGenes Sequence Report: AA039519

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Sequence
AA039519
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039519
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGCGATCCCACTCTGCGGGAACCGGACCTCCGGCCGTGCGGCTGGATCGC
TCTCTACGACGGCGACGATGTCCACCCGGACGACGCATGCGATATCACCT
TCTTCCACATGTGCACCAGTAGGCTCCTCCATGTCCGCCTACCAGAACTC
AAGCGCCACGGGATCATGGGCTTCACCGATGGACTAGTCATCCTTCTGGA
CAAGCGCACCACCATCATCCGGGTGCTCCATCCCTTCACACAGTTCATGT
TCGATCTCCTGTCCCTCATCCCGGCCTTCCATGAGGTGCTCTTCAAGAAC
CGGAGGTGTGTGCTCGACATGAATGTTGTGGTCTGCAGCGCATCCCGACC
TCCATTGTGTTAGACAATCAACTTGTGTTCCAAGTTTAGGACTCTAAACT
GACTCGACTAGGGCACCGACTCGGCCAGGGCCTAGAACATCTATATATTC
TCTTGTAATTGTAACAATTATTATCATCGAAGTATCAACCTCGTCTTCCA
TGAGGCCTCCAGCGTTGCCGCTCTTTGGGAGGCCCTTTGCCAACTTTTTC
AAGACAACATCGATGCCCACATCAACATGCTTCACACAGAACTTCACAAC
ACTGTGCAGGGCGATTCTCTCATGGGTGTTTACTGTCAGCGCCTCAAAAC
CATCGCTGATGAGCTCCAAGAACTTGGGAATCCCGTCGACGATAGGCAAC
TCATCAACATCCTCCTTGTCGGCCTCGGTGAGTGCTTCGAGAAACAATCT
TCGTTCACCCGCATGATGCGACCATGTCCCTCCTTTGCGGAGGTCTGATC
CATGCTCAAATGGGACGATCGCGCCATCACCAACAAAGAGTCTCGCCCCC
AGGTTTTTGCGGCCATCCCGTGACCTCCTACGCTAGCCTGCCTGCGCCTC
CACCGCCACCTTCAGCACAACCTCCTCATGGTTGGCGCCCTAGGCCTAAT
TACTGTGGAACCCGACCTATCTATTGGCCACCACGACCACCGATTGCACC
ACCGGCCCAACCTCCCGCGTCTCCACCTCTTGCCTCGGTCCAGGCGCCTC
CTGCTCTAACCTGGCACCATCAACACAACCCCTGGATTGGTCTCGTGCAG
GCCTGGCCTATGCCTTGTGTCGTCCTGTCTCCGATTAGCGTCCCTCCTGC
CTATGGCGGCGCCTGGCAGCCCGGTGTTCACCCTCACACGGTTGCACTTG
TTCCCATGCTACCGCGTGCGCCTCAGCATGCCTATCATGCGGCTTCGATC
TACGCTCCATATGGCGTCCCCTACGGCTCCCCATATGGCACTCCTGCATA
TGCCGATGGGAGCTCCTACTCGGCACCGCCTCAACCACTTCAGCAGCCGA
TGTTGCTGCCCACGCCGCCTTTTCCCTCAACTCTGAGTTGGGATCAAGCT
GCCCTTTTAAAGGCCATGAACAACTTTGCTGCACGAGGAAACTTAGGTAC
GAATTGGAATTTTGATTATGGTGCTTCTAGTCATATGTCTGCTTCAAGTA
ATTTTCTATCTTCCTACACCACTTCTCCTTTTTCTTCAATTATTCTTGTC
AATGGTTCCTGTATTCCTATTCATTATAGGGTTCGCAGCATAGAAAACAA
AAAATTCCTACGATGGGGATAACTATGTACCAAGATCTATCTACTATATA
CAAGCAACGTGTAGATATACATCCATAGAGAAAATACCCTTGTAGACCGA
CAAAGTTTAACGAGGTTATACTCGTGGATGATGTAGACGAACGTTTGCCG
ATCTCAAGATCGAGAAGAAGTCCAGCGCCGCAAATCAGCAGCGCATCCGT
GCTCGCACACACGTCCAAGCCACCGAGCAACCTCTGTCTCCTCGCTCCAG
CGTTGCAGCGGAAGCAACAACTCTTTCTTGCCGAAAAGCCACCAGGAACA
TATATCTCTCTAGTCCGATATAGTGGGGGATAAACTAGAGGGGGAGAGAG
ATCCTTCACGAGGAGGTGTGCGAATGAGAAAGGGAGAGGAGGGCTTTATA
TAGGAGGGAGAGGGCATCCCAAGGGGGTGGCTGACGCATGGGGGCTGCCC
CCTCCCCTCCTCCATTCATGTGGGTGGAGATCCCACTCACTTTTAGCCCC
TTCATTTCTCCACTCAAAATCCCACTCAAAAATCCCATTAAATTTCCACC
AAATTTAATGCAATCTCTCTTTAAATAAAACTACTTTTATTTATTTATTC
AGAATTTTGTCAATTAATTTAATGGACAAATATTCACATAAAACCCCTTG
CTAGTATTCTATTTCACATGCAAAAACTCTTTCAACAATTTCATCCAAAA
CAATTTCGGTGTCTAGTGAAATAAATTCATGTTCTTTGTAAATCTTTTCG
ACAAGAAACTATTTGTTCCAAATGGTGTCGGTGTCTCTTAAGTGTGTCAT
CCTACGGTTTTCGAATAATGCGGACATGATCGAGACCCCTCTCAGATCAA
TAATCAGAAGCGGGACCTGGAGATCGTTACTGACTCCCACACATTCAACG
ATGACTTCTTTGTGATCATGAGAACCTTTTAAGCTAGAATCTTAATCCCT
TTGTCTCGCGATATATTACATGTCCGAGATTCGATCATCGGTATCTTCAT
ACCTAGTTTTATCTCGTTACCGACATGTACTCTTTTCTCGTTTCCATGAT
ATAACATTCTAGTAATCAAATCACTTGCTTGCAAGCTAACTAATGTGATA
TCATCGAGAGGGCCCATAGTATATCTATCCATCATCGGGATGGACAAATT
ACACTCTTGATCCATGGGCCTCAACATAACACCTTAGTAGCACTGAACTC
ATCTTTATAGTCACCTTGTTACGGTGTGACGTTTGATGTTATCAAGATAC
TCTTCTAGTGTTAATGATTGACATGATCTCATGGTCTCAGGATTAGGATT
ACTTCATATGATGCTATAGCAATATAAACTCAATGACTTTGGTCGTAATG
CTATACTTCGGATGAATGTTTATAACACAATTCCAATAATATTGTGACCT
TGTTATTAACAACATCCAATATCCATGATCAGAAAACCTTGATCATCTTA
TTAATCAACGAGCTAGTTTATAAGAGAGGCATAACTAGGAACTTTCTGTT
TGTTTATTAAACACACATGTATTAACGTTTCCGTATTAATACAATTATAG
CATGCAAAATAAACATCTATCATATACTTGGAATATACATAATAACAATT
TTATTATTGCCTCTCAGGACATATTCCCTTCATTCATTGTGTTGGACAAG
CACAAATTTCTTCAACTTCTAAACCACTTCTTCTTCATGATGTTCTTGTT
TCTCCTTCTCTTATCAAAAATCTTATTTTTGTTCGCCAATTCACTCGTGA
TAATCTTGTCTCCCTTGAATTTGACCCTCTTGGTTTATCTCTAAAGGATT
ACCGTACCAAGGACGAGATCGCATGCTTCATAGCTCCGGTGATTTATACT
CTCTCCATGGTACCCCGGCCGTTGCGGATCCAACATCCATGGTGGCGTCA
ATTGATCTCTGGCACCGACGTCTCAGCCATCTCCATAGTGCTGGTTTATC
ATCCATCCTTAGTGAATTTTCAATTACTTCTAATAGACATACTCATAATT
CTTCGTTGTGTGAGTCTTGTCAATCGGAAAAACATGTTCTTCTACCCTTT
AGTTCTTCTACCTCTACTAGTACCTTTCCGTTTGAACTACTCCACTATGA
TTTATAGACGTCTCATGTCAAGAGTATTTCAGGTTATAAGTACTATCTTG
TTATTTTAGATGATTTCACTCATTATGTTTAGACCTTTCCCTTGTGCAAT
AAATCCGACATGCATTATCTCTTTCTAAATTTTCAACGTTATGTCTCAAC
ACACTTCTTTCTGCCCATACGTTTCGTTCAGTGTGATAACAATTGCGAAT
TTGACAACTACAAAAACAAGAACTTTTTTCTCCACGATATTCTCCTTCGT
TTTTCTTGTCCCTACACCTCTCCTTAAAACGGAAAAGCTGAACGCTCTTT
ACGCACTATCAATGACATCTTTAGAACCTTCTCCTCCACGCCTCCTTGCC
ACCAAAATTCTGGGCCGAAGCACTTCACATGGCTACTTTTCTCCTTAATA
TTCGACCATTAAAAGCAAATTCCAACAATACACCCTTCTATTCTCTATTT
TTAACTCACCCTAATTATGCCGACATTCGCGGTTTTGGCTGTCTTTGCTT
TCCCAAGTCTTCTACTATTACCCCCAAAAAACTTTATTCTAGATATATTC
CCCGCATCCATCTCGGTTTTTTTAGACGAGCACAAAGGCTATCGTTGCCT
CGATCTCATTCCGGGTCTCGTTCATATTTCTCGTCATGTCACTTTTGTAG
AAAATATTTTTCCTTTTGCTCAGCATCCTGACTCCTCTACTCCTGTACCT
ACTTCGCCATCCTCTACAGTGTGTTTTCCATACTTTATGTCTCCTGAAAT
TTCTGCCGCCAGTCCTGTCGCGGCAGCCGAAACCTCTACCACTCCTGTCG
CAGCAGCCGAAACCTCTGTCGTGGCAGCAAAAATAGTCCAAAATCCTGTC
GCGGTAGGAAACCCTGCTGCCGATCCTCCATCACCGCTACCATCCCCCGC
GCCAGCCCCCTCCCCCGCCACATTCGTACCACCAACTCGGCGTCGGTCTC
TTCTGCTGCGCTTGACGCCTCACCTCCCCCTCCTACACCACTACCTTCAC
ATGACATCCCTATACCTGCACCACTCAATGATCATACCATGCGTACTTGT
GCAAAATCTGGTTTCCACCTTCCTACTCAACGTCTAAACCTACATTCTAG
CCCGACTATATATCCTCTCCCTAAAACCTACAAATCTGCTCTTCTTGATT
CCAATTGGGTTGCCGCCATGCAAGCTGAATTTAATGCTCTTATTGAAAAT
AATACTTGGACTCTTGTGCCTCGCCCATCCAACTCCAATATAGTCTCTGG
AAAATGGGTATTTCGCCAAAAATTTCACTCCGATGGCAGTCTTGATCGCT
ATAAGGCCGTTGGGTATGTTGTTGATATTCTCAACAACAAGGAATTGACT
ACGATGAAACTTTCTCTCATGTCGCTAAGCCTAGCACCATCCGCGTTGTT
CTCAGTTTAGCTATCTCTTCCTCCTGGCCTATTCACCAATTAGATGTCAA
AAACGCTTTTCTTCATAGTTCTCTCAATGAAATTGTCTACTGTCAACAAC
CTTTAGGTTTCAAAATTTTCTCCTACCCTGATCATGTGTGTCTCCTTAAA
AAATCTCTCTACGGCCTCAAACAAGCTCTCCGTGCCTGGTTTCAATGTTT
TTCTACATTCATTCAAACTATCGGGTTTACTCCATCTCTTTCCGACAATT
CTCCCTTTATCTATCATCAAAACTCTAATGCTGCCTACATCCTTCTTTAT
GTTGATGACATTGTTCTTACTGCCTTCTCCCAATCTTTCCTAGATCATGT
TATTTTCCTTCTTCACAACGAATTCCTCATGACTGATCTTGGTTCTCTTC
ATCATTTTCTAGGCATTGCTGTTCATCGTGATACATTTGGACTTTTTCTC
TCTCAGCGTCAGTATATTCTTGATTTGCTTAACCATGCTGGTATGACCGA
TTGTTAGTCTTCTCGCACTCCTGCTGACACATCTTCTAAACTTTCTTCCG
TCGACAACCTTTTTCTGATCCTACTCTATACCGTAGTCTTACTGGTGCTT
TCCAATACCTAATAATTACCCGTCCTGAAATTTCTATCGCTGTTCAACAA
GCTTGTCTCTATATGCATGATCCTCGTATCCCTCACTATAATCATGTCAA
TCGTGTTCTTAGTTACCTAAAAGGCACACCCAACCATGGCTTACATATAA
ACTTTTCCTCGCCAAATACTTTGACAGCTTACTCTAATGCAGTCTGGGCT
GGTTGTCCAGATACTCGACGATCCACATCCGGATTTTGTGTTTTTCTTGG
TACCAATTTGGTTTCTTGGTCCTCTAGAAGATATGTTACGGTCTTTCGCT
CGTCTGCTGACGCTGAGAATCACGTCGTGGCACATGCCGTTGCTGAAACG
GTCTGGCTACGCCAACTGCTCACGGAGCTCCATCAGCTTTTTCACCAAGC
GACTATTGTTTATTGTGACAACATCTCAGCTGTTTATATGTCAGGCAATC
CAGTGCAACATCGGCGAACTAAACACATCGAGATAGACATTCATTTTGTT
CTAGAGAAGGTGGGTCTTGGACAAGTTCGTGTTCTTCATGTTCCTACTAC
GGCTAAATTTGCAGATATCTTAACCAAGGGGCTAGCTACTACATCTTTCA
CTGATATTCGATTCAATCTTAACATCGTCGAGCCTCCGGTTGTGATTGGG
GGGGGGGGGGGGGGACTTGTGTGCCAATTTAGGACTCTAAACCGACTCGG
CTAGGGGCACCAACTCGGCCAGGGCCTAGACCCTATATATATTCTCTTGT
AATTGTAACAATTATTATCGTCGAAGTATCAAAACTATTCTATTCAACAC
ATTGTCGTCGTGGCCTGGTTCCCATGGTCGTCCGTGCTGCTCGGCGTCGC
CATTCGAATTGGGAGGTCCTCTACCAAGGGCACACCCTTAGGAGCATCTT
TCCCTTCCAAGGAATGCTTTACGCAATCAAGAGCTCATCACGAGAGATCA
TGCAGCTTTACCCGAGAACACTCCATCCCGTGATTGCTCATGTTTCGGCT
CCGAATTATCTGTGCGATCCGAGTTTATGCGGTTACTTCCTCGTCGAGTC
CGGTGGGCGTGTGCTGTTTGTTGTCCACCATGTAATTGCACTGCCCCCGG
CTGGCACAGAGCGGTGCCACCAAAACGCTTTCAACCTATATTCATTGGAC
ATCGACGGAGGGCGTAAGCTGATCCCAGTGAGCTGTCTCGGTGAAAACGA
GCTCTTCCTCCATGATAATCGGTGCCTGTCTGTTTCAGCAAGGGATATCC
CTTCCGTGAGCAGAAACTCCATTTACTTCTCCGTATTCCGTGACCCCGTC
ATGGTGCACTCGTTAAGGACTGGTTTCTCCGAGCGGCTAGCAGTGTCCTG
CCAAATACATGACATGAATGATAGTATCCGCCCCTTTCCTTCACCATTAT
TCTCACCTACTGCCGTCCTTATGAGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.