Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA041676

[Submit comment/correction]

Sequence	AA041676
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA041676
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTTAACTGCGTGCACACGACACGGACGGCGACACGGGCGTTGCGCTGCGA CCGCGTTATGATGAGCGCCCGCCCGGCCTGCCTGCAAACGGCTGCGTGCG CGTGTGGCAGTACCAGCTGGCCAGCAGCCCCGGCCCCACCACCAGTCTCC AGTCTACCCCCTTCCTGCTTCCTGCTGGTAGACTGGACGAACGCTCCGCT ACTCATCCCCGTCCCGTTCCAGTGTTCTACTCCAAGCGCAAACAGCACAG CGAGGCCTACCCACCCGGCCGCCCCCTCCGCAAATCCGCCAATTCCCCCA AAAATCCCGCCTCCGCGCCTACCTCGCCGATCCGCCCGCCGCCGGCGCCT CCTCCTCTGAGAATTCGGTGAGCCTCGTGTTTCTCTGGAGGAGAATATCG TATTTCTGCCTCGACGTGGGGCCTATTTTTCCTGACTCGCCGCTGTTGCT GTGGGCATCTGCAGGAGGCGGCGGCTGCGGCCCGCCGGTTGGAGCCAGCC CCCGGGATCGTGCTGCGGCGTGGTTCCGGGCTGACTCGTCCCCGCGTGGA TCGGCTTGGCGGCGCGGAGATCGACCGGAGGTCGCAGCGCTCGGCCGCGT GAGCGGTGAGGCCGCCACTGGTGTGGAAGACTAGGGCTCGGTGTTCCGGA GGGGCCGGAGGAATGGGGGGCATCTGCTCCAAGGGATCGGCGGTGGACAA GTCTCCCAGCGACACCACGCTCGGCCCCGACCGGGTGATCCATCACCACC ATGAGCGTGGCGGTGTGAAGGAGGAGGAGAGGAAGACGGTGGTGGTGGAA GAGGCGGCCGCCAAGCGGACGCACGAGCAGCAGCCGCCACAGCATCAACA GCCGCCACAGCATCAACAGCCACCACAGCAGCAGCAAGTACAGCAGCGGC ACCTCCCTGTCCTGGAAACCGCGGCCCCTGGAGTCAGCGGTGGCGCTGGG GTGGCGCCGTGGGACGGCGTGCCCTCGCTGGCACGGCAGCCGTCTCAGAA ATCTGGGATGGGTATGGCGAAAGCTGGTGCTGCCAAGGCAAGTGCCCCTG CCCCATGTTCTTGGTTCTCTTTACTTTGCTGCAACTGTGTGTGTGCAATG CAGATTAATTCATTGCGCGCCGCCTCATCCGTTGAAAAATGACTCGCTGA TTGGATATTTCCTTGTATCAGTTTCAATCTGTGCTTGCTGCCGCGGTTGA GAGAGATCATTACTCTATTTGCCAAGAAACTGCAAAAGTATTTTTGTAGC AATGTGTTTAGAGGCTGTTCTGATGAACATATCATCTACTAGCTTATTTA CAGAAAGCAGTTCATTGCTAATTGGCCAATAACCAGGGACATGTTGTTTG CTGCTGACCCTGTTTAGCCTAGGAGTGATCAACCACCAGAGATGTGAACC CAATATAGCCCTCCTTAACATGTTCTTTTATTGAGCATCATTTGCTAATG GCGGAGATTCCTTTGCACTTGTCAGTGCACATCCATCAAGTAGAATGCTT CATTGACCTGCAATCATAAAAGTTTGCAAAGTATATTTGTGTCTCTTTTG TTGCTCGGCAGCCTGTTTTGGATTTATCCCCCTTAAGTGATCTCGTGCTA TTATTTTTGTAAGGACGCTCGGACCATGTGACTATGAAACCTGATGTGTC TTGCTATACTGTTTCTAGCTTTCCGAGTGCAGTGAAGTGTGTATATGTGA CCTGCCCAAAAGGAAAATGGAAATTGGTTCTTATTATTAGGGATGTCTAA GCTTGTTGGATTCCGTTATGCCTTTATACGTCTGTTGTAACTTAAGCAAA TCCAATCCCACAAAATGAATTATTTGCAAAAGTATTTTTTATCTTTTATC CTTGCTAAAGAGATCTCTCGCCTCTCCACAATATGGCCGTAATGTTTGTT GCTCTGGAATGTTGCTTCTATGTGACAAATTGTTTGACCCCATACCAATT TCTAATGTTTCCTTGCCATATTGATTGTTGAAACAGGTTTCAGAAGTAAG CTCAATTCTGGGTAGGGCTGGTACTGTTGGGCTCGGGAAAGCAGTGGACG TACTGGACACACTTGGCAGTAGCATGACAAATTTGAATGTAAATAGTGGT TTTGGATCAGGCACTGCAGCAAAGGGTAACAAAATATCCATTTTGGCATT TGAGGTTGCTAATACCATAGTGAAAGGTTGCAATTTGATGCGAGCTCTTT CGAAAGAGAGCATAAAGCATTTAAAAGAAGTGGTGCTTCACTCAGAAGGT GTTCAAAATCTTGTAGCCAAAGATATGGATGAATTACTCAAGATTGCTGC TTCTGACAAAAGGTTAGTTCTGAATCTTTGCTACATTTTACCAATTGCAA CATTTGGCCAAATAGACTTCATTTTTTGTAGAATATGCTGAACCGATAGT ATATGAATAAATCTGGACCTGAACATCTTGTGCTATTGTCCTTATTGAAG TTTGTATGTTTCCAACAGGGAAGAGTTGAAAGTGTTCTCTACAGAAGTTA TTCGCTTTGGAAACCGATGCAAGGATCCTCAGTGGCACAACTTGGACCGC TACTTTGACAAGTTCAGTTCATTTTGGTCCTTGCATTTGATAATGATAAT GATATTACAGTGTTATTTAGCACCTTTCTGCATCGAACTTTTTCAGGTTG TCTTCAGAGCGGACCCCTCAACATCACTTGAAAGAAGAGGCAGAATCAGT GATGCAGAAATTGGTGGCTTGTGTTCAATATACAGCTGTAAGTAATGTGC ATTTGCCTTATAACAACTAGGTTTGTGATTATAATTAAGCATGTTGGCCA CGACCCACACCAAATGTTGGGCGCATCTTTCTCTCAATCTCTCGGCTCAT TCTTAGTGGACACACACACACACATGAGCAAGGAGAACAGAGGAGAGAAC ATGGGAGAAACTTGCTTGCTCTTCTCTCATATATACATGCACATATGACA CACACATATGCACTTATATGAGGATCTACATTCTGCCACTAGCTTACACA CATATGTATGACACAGATACGTATGTGCTTCAACCTGACACACAGGCTTT CTATTGCCTCTTGGCTTGCAACTGCCTTCTCTCCATATATCTATGTGCTG CTAGCAGTCATACAGCAAGCTTATGCCTTATAAGCTAAGTAAAGGCAAAC CGACCTGTCCTACTATTCCCCAGTAAAAACAACACAAGGATTGTAGCTAA CAAAGCAGACCACACAAAGCAGACCACAACATAATTAAGAAAGAGTCTTT TCTTCATAAATGTTAAGTTGTATATTCCATGAAGACATAGAGTTGTCACT AGAGCCTAAAGAGAACTATAAATTGATGGCAACTTTTGTATGGTTCAATT TTATCTTTATTAATGAAGAAGCATTCTTCCATTCCTGATTGCATGATGTT TTAGGAAATTACATTTCAACCAAGACACATGTACAACACACTGTGTAATG GCGTAAAGTTATCTCACAATGGTAGAATGAAATATATTTAGGAGCAAAAT TTGAATTGTAGAATGATATGTATTCATCAACAGAGGGAGTATATAGTATT ATTGTTCATTTTCCATTAGCTTTGTAATGTTCAGTTTGTAGCCGAACCTT GGCTGTCAATTTCCTAGCATTAATAAGTTTTCTTCTGTTGCACCTTTTGT TCAAATTATAGACTTCATTTTGTTTTATTTTCCAGGAACTATACCATGAA ATGCATGCCCTTGACAGATTTGAACAGGATTATCATCGTAAACAACAGGA AGAGGATGGTTCAAGTGTCGCCCAAAGAGGTTGGTTTCTTCTGCATCACA ATTTATAGGAGTTATTTGCATAAATCCATTCACATGTAAGACCTTCTGCG ATGAAGAATATTTTTGGTGTCTTAGATGGTGGTTGCTGTTTCTGATTTCT TTTCAGGCTATCTGAAAAGTTCAAATTGAGTATAATCCTCAGAATATTTG CTTTTCTAGAATCTTTCTTTTGGGAGACAGGCTCCATGCTATGAACCACA TAGATCAAATTGTATATGCATAATTGAAATTGCCAAATTGACCTCAACGG TTTAATACATTATATCACAATCAATGTTTCTAATTTTGCCATATGTCACG GTCAAGTGTCTCTATTAAACTGTCAGTAGGTGACCAACACCTAGTGTATT TCGACCATTATATTTAATGCTTACTTGCATGGTTGGTATGGCTGCATGGC CACATCTAAGAAAGTCAAAGCAGCTAAAACTTTGTTCTATGCCCAGTTGC CATCACTTGTTTCAGTATTGAAGTTCAGCGAATCAGCACCACAGCCTGTA TTTGTATGTGGTTCGCTGCTTGTTAAAATACTTTGTAGTCCAGCCATAAA GAAGACGAACCATTGAGATGTGAATAGGATAACCTGTATGCAACCGAAAC CAACTTATAGTATCTATTTTAATCTCTGGAAAATATTTAGTGATGCAATA TTAGGCCTTTAGCCATTACTACCTGCGTATAATTTATCATTTTATTTTTT TCCCTAAAAAAAATCTTGATATTGCCTTGCAAGCGCTAGATTTTGAACAC ACTTGCCCCTGGGTACCTACCAGTTCCTTCTGATAACATTTCATAGTTCA TACTCCTTCCATCCCCAAATAGTTGGCATATAAATCTAGTGATAAAGTCA GTCCTTTCTAAGTTCGGCCAAATATATGGAAGAAAATATCAACAACTACA ATATTGGGTAAGAACATCACATGAATATATCTTATGGTGGATCTATTGGT ATTGATTAGGTATTGTAAATATTCATGTTTTTATATGTGACTTGGTCAAA TTAAGAAAGCATTGACTTTTGACTAAATTTATAAGCCACCTATTTAGGGA CAGAGCCACGGAGGTAATACTAGAGTTGTTACACTTTTTTGTTTGCTTTA TTTGATAATGATTCTTAATGTGGTTTTGTTCTGTTTGCAGGTGATAGCCT GCACATTCTAAAGCAGGAGGTGAAAAGCCAACAGAAGCATGTTAAAAGTT TGAAGAAGAAGTCTCTCTGGTCCAAGAATTTGGAAGAGGTTGGTAGGTAG TTTTATTATAATTCTGTGCTACCAGGAACACAAGTTTTAGGGAAGCATGC TCATGTTGATGTTGTCTAGTTCCACTCACTCGATGCTCTGAAGGAATGAT ACTCGGATTTGCTTGCGAAATATTGTTTGTCTAATTTCAGAAATAATACT TTTTTCCTAGGTTATGGAAAAACTTGTAGACATTGTGCACTTCTTGCATT TGGAGATCCATAATACCTTTGGGCACCCAGGTAATAAGCTTTGTGATTAC CATCTTGTATAAAATGTGTATCCTTCTGCAGAAATTGAGCTAGTGTTGGT TAGTCTTTTTTTTTGCTGTTTTACTGCTGATAAAGTGCGACTAATGGAAA ACACACCTTTTATTAGTGTGCGACAACTTTAGTTTATCTCACCACTCTAA TGACCTCACGATAAGCATTACCCAGATCTGTATCTTTAGTTCAGCAGTGC TGTTTGGATAACCAAATTAGCTCAGTTCAGGTACTTCTATGTCAAACTTT CAAGTTTGTCACCTCATCTCTGGTATTTAGCAGTCCTTCTCACCCCCTTT CTCTGAAGAAACATCACTGGTGTATTCTTCTCATCATACATTTTCTTAGG TTCAAAATACTTATTCTGACCTGACCGTACTTCATTCTTGCGGAAGCCAC TCTGGCGACATACAAGTGTGCTCATAAACTGGGAAATGCCCACAAGATTC CTTGTATATTGTGATCTCAACCCATACTTGAATACCCCTACTTAAAACGT GTTGGCAGTGTAAGTCCATCCTACGTGACATTATGATCCCATTCATCATT GGCGTCATACTTGAATACCCCTGCCCAAAACATGTTGGCAGTATAAGTTC GTCCTATGTGACATTGTGGTCTCATTGATCATTGACGTTGTTGAAGACAT GGTCTATTGCCCGACTTCTTATTAAGCTACACTATGCTCTTTGAAATCAT AGTTTGACATGCATATGCCAATAAGTTTAAACTTTTCTACTCCCTCCGTC CAAAAATAAGTGACTTGAGTTTGTCTAGATTCACATGCATCTAGACATGT TTTACTATATAGATACATCCGAATTTAGACAAAAGCATGTCACTTATTTC TGGACGGAGGGAGTATTTTATTCTGCATTTGTCATTTCTCTTACAACTTT TGCTTCTACCAATCTATAGACAATGAAGAATCACAGGAACCTACCAAGCG ACGTAATAGATTGGGTCCAGCCGGACTCGCGCTGCATTATGCCAATATCA TCAGTCAGATCGATGCTCTTGTAAGTTCATCAGACACCATCGGGGATGTC TTATAAATTTCTGTGATATGAAAACCAAAAATCTCTGCCATTTTTCTATA CCAGCAGACAGTTCTTATGAATTTGTGCATGTCTCAAATTATCATGATTT AGTTAAGGGACCATGTTTTATTGTACAAAGGGAATAAAAGGATCAGTACA ATGTTACACTCGTGGGGTGTTACTGTTACATTTTCATGTCTGTGCAGCTT GATGTTGTAGTGCTAACTCAACTTGTTGCTTTTCTCTTCTGTAATCTGAC AAGGGTTAATCTATTGGCAGGTTTCTCGGTCAGCTTCTGTTCCTCCAAAC ACAAGGGATTCATTATACCAGAGTTTGCCACCAACCATAAAATCTGCTCT CCGTTCTAAGCTACATCCTTCTGGAGTCAAGGAAGAGGTATCCATGATAG CACCCAACAATTCAATAGAGTAATACTGGCTTTGTGAATAGAGAATGAAG TAGACTGCACAAGTCAACCATGCCATAGTATACATGTAACCATAAAATTG ATGTAATATTGAACTCAATTGGTACAGCTTACTGTTTCTCAAATCAAGGC GGAAATGGAGAAGACATTACGGTGGCTTGTCCCGATTGCAAATAACACCA CTAAGTAATCTAAGTTACCTTCATAGCACTCCACAAATTACCGCCATTTC ATTTTTTTGGTTACTGAATATGTGATCGTGTGTCCTTTCAGGGCTCACCA TGGTTTTGGTTGGGTTGGAGAGTGGGCAAATACAGGGTTAGTATCCAACT TCTTTCAATTTGAACAGCGGGAATGCAAAAGTGGAATTTTTAAGTATGCT CCTTTTGTCTCATGCAGGTCAGATGTAAACTGCAAGCCGACAGGGCAGAT GGACCTCACCCGAATCGAGACACTGCATCATGCTGACAGGGACAAGACGG AAACACATATCCTCCATCTTGTTATATCGCTTCAGCATCTCATCAGTCAA TCTAGAACAGCTAATGGCGAGCGATCCCCCATCAAGTCTCCTGTCCGATC TCCTACACAAAGGGGCTCCACACTCACATTGTCTTCAAACATAGCCAGCA GTTCATCATCACCACTTCTGACGCCAGAAGATCAAGAGATGCTAAGGGAT GTCAAGTACAGGAAATTCGTCCCTGGTATAAGCAAAAGCCAAGAGTTTGA CACAAAGGCAAGACATATCAAGCAAAGCAAGTTGATCAAAAGTAACAGCC ATTCACCGAGCAGTGGCAACAGGAAAGAATTCCTATCAATCAGGAGTCTG CTTCCTGTCATCGACTTTGAAATCGATAAGACTAAAGCTCTGGATATGAT CGACAATCTAAAAGTGAAGTGAGGAATTGAAGTAGATCAGTGCCAATTCC TGTATATTTCGATCCGGTTTGTGATCTTGAAAATCCATATTGCTTGAAGT ATACATCAAATCTGCCGAGCTGACTGCCATGTGCCTGCAAAGAAGGCGCC TGCGTGAGACGGGCCGGTAGGTTGCCTATTTGGAGTCAGCGAGAGAAAGA TGGATGGGTGGTCTGGGATCATGGCTAACTTATGTATGATATGGGTGTGA AAAAGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.