Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA029379

[Submit comment/correction]

Sequence	AA029379
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA029379
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGCGCGTCCCGTGCGTGCCCCCCTTCCCCCGCACTCTCGCCTCGCATCGC CCTTCTCCCTCCATCCCACATCACCACACCCGAAGCGGCACGGCACGGTA CCACACCGACCAAGCCCACACAGGTTGTTCCTTCCGCCCCGTGGAAGCTT CTCTCCCCCACCCCACCTCGCCTGGCTGCTGCTAGCTACTGCGCGAGCGG TGGGCGTGTGTTCTTGTCTTGGGGATGGCGACGGTGATGCACCGGTCGAG CTCGGACGGCGGGTCAAGCAGCGGCTGGTCTGAGGCGGCGGCCGCGGTGG CTGCGGCGGCAGGGGAGGAGGAGAGGGCCGGGTGGGAGGTCCGGCCGAGC GGGATGGTGGTGCAGGCCAGGGACAGGGAGGACGGCGGCGCGGCAGGGGT GCCGCCGAGGCCGCCGCCCCCGGAGATCAGGGTGCGGGTCAAGCACGGCG CCGCCCGCCACGAGGTCGCCGTCTCCTCCATTGCCACCTTCGGTCAGTGC TGCTGTTTCCCTTATTTGTTAATCTGTTTCCCTCTTCTTGCCCGGGTAAT TAGCCATATGTTTCGTTCCTTCCTTACTAAACCGCGCCTAATTGGGGCTT AACTTTCCTGTCGTCGTTTCCTCTACGGAATAGTAGCCGAAACTGAAGTT TTCTGCTTATCACTTTGGGTTTCAGTTAGTTAGCACACTGTCAATGTGAA AAAAAGCGACCGAGACAGAAACGTAAAAATCTTGTCTGCGTCACTCGTGC CAAAAGAATAAAAGTTAATCACGTCGCCAAGTAGTAGGAATAGTGCATAT TTTCGGCCAAGGTCTGACCTTTCGCACGGCATGAAAATCCGTGCTGGCCA ATCGTGAGCCCACGACCACTGGATTAGTCTACATATCGGATTTTCTTTTT CATTTAAAAACGCGTCCTTTAAAAAATGGGCATGACTTCCGGCCGTGCCG CGTGGAGGAATTAGTGCCGCCGCGATACTGGGACAGTGAGACATCCCCAT TCCCACCATTTTTTTCCCCCTCAGCTACACACTACGTGCCGTGGCTTCAT CTTCTTATTTTAAAGGCAAAAAAACGAAATCCGTGGAATAATCCTTACGA TGCGGCCCGTGATTCCGTGCTTCTTGATAACAGCGAAAAAATAACTTTAA TGCTGTCAGAATTTTAACTTTTCCAAGAATTATCTAGGAGTAGAACAAAT ACTTGCTGTTTGGGTTTTCTTTTTTGAGGTAATTTGCTGTTTGGGTTTAG AAGCACAGCACTAGATTAATGCTAGAGTATAACCAAAGCTACTCATTACG TAAGCTTCAGTTCCCAAACTGCACGACGGTTTAGTAGCATCTGCCGTGAG ATCCGAGGATGCAATCCATTGGCCGCTGCAGCTCCAACGCAGTTCAGACG CAAAGCGCATCCAGGTAAGTTTCAGGCTGGGGATGGATTACGAGGCTAGA CTCGACCGACCAGATTGGCTCGTCGTCGCTTTGCTTTTACTTTTGCCCGA CGAGACGACGAGGCAGTGACTTCCAGTTGGCGCGCGCAGACCGCAGGCAG AGGCAGTGACTGCTACTAGATTCTACTCCGGGGGGATCCTGGCGCAGGAT GGGTCCACGTGTACGGCTCGCCGCATCGGACGGCCAGCTACGGCTGGGGC ACGGCTCGTTTGTCCCGTTGCACCGACACCTTTTGCTCCACATGATTGTT CTACTGTTGGGACGAAATGTAAAGGCCAGAGGCGTCGCCCACCACGTTCA CCAGTCTCGTCCTCCAAAACCCATGCGTACTTGACGTTTTATAAACCGTG GAAATGTTTTGGTAAATGGTGGAGAGAGAGAGCAAAGAAATCGATGGAAA ATAGCCCATGCTTTTAGTTTCCTGTGTAAAAAAATTTGCTCTGCCTCTGC CACACCAATGGGATGCCTGGTCACTGAGGATCCGGTCGGCAAGTGGCACT GAAAAACGAAAAAAAAAATCCGTGTCACTGTCAGTGTCAAGAACCATCAA ACGTCACCCTTCATTCACCGGCAAAAGTACAGAGCAAGATCCGAATATTT ATCACACGCGTTACTACGAGTGCAAAATCTTGGTGGGAAATTCGCACGGG CGATCATCAATAACAGTTTCATAGTATTTTAATTGCGTGTGGGCTGGCGG TGCAGGTGAGCTGAAGAAGCTGCTGGCGGCGAGGACGGGGCTGCACGCGG CGGACCAGCAGGTGACGTACAAGGGGCGGGAGCGGGGCAACTCCGAGTAC CTGGACAAGTGCGGCGTCAAGAACAAGTCCAAGCTCCTCGTCTCCGAGGA CCCGGCCAGCCTCGAGCGCCGGTTCATCGAGCGGCAGAGGAGCGCCAGGA TCCAGTCGGCGAACCGCGCCATCGGCGTCATCGCGCTCGAGGTCGACAAG CTCGCCGACCAGGTATTATAACACACTCGCTCTTTTTTCCGGCCACCACC AGCGATCAGTGACCAAACGAGTTCTCGACAGTTAGCGACAGTATCAAAGC AGCTGATGCTTAGCTAGAGCTGATCTAGTAGTAGGTAAAAACGGAAGGCA TTATCCTAGGGTAGTTAGTTAGTTGTGGTTTCAGTCTGTGACAAGGCGTC AGTCAGTCAGTGAGACACGCGGGCATGGGAAGAAGAAGACGGGATGCTGC CGCATTCGCATTGAATCCGCATGTCCGGTCCAGGGGATTAGGTGAACAAA TTGACGCCGAGAGCTCGTCCAAAATACAGACTTGATGATGTCGGCCGTGT GCGTGCCTGTCGTTGATCGATGCGGTGTGGCCGTGTACTCAAGTCATGTA GCAGCGGTGAATTTTCGGCATGGTCCCCGAGCAAGGTTCACTTCATTCAT CGTAACCATTAGGCTGTACCTCAGTCCATCCCTGACATGGATGCTCGCAG TTTCATCATTGCCGCGCAAAGCAGCCGGATGCCTGCCTCTGACGATGCGA TTCTGAATCTTTCTTTTATCAGACTCTGCCTGCCTCTGACGATGCGATTC TGAATCTTTCTTTTATCAGACTCTGCCTGCCTCTGATGATTCTGAAACTG ACCGGATGTAAAATTTTTGTTCCAGGTAACGAGCATCGAGAAGTCCATCT CGGGCGGGAGCAAGGTGGCGGAGGTGCAGATCACGACGCTGGTGGAGCTG CTGATGCGGCACGCGGTGAAGCTGGAGAGCATACCCGCCGACGGGGACTC CTCCTCGCAGAAGAACATCCAGGTACACCCTCCATTCACCGCACTACGGA AGAGCAACAACCGAGGCAGATCCGTTTCCAGGGGCATCATCATCATCATG CCACCGGTTCTAGTACTAGTACAATTCCCGCCTCTGATGGGTGGCGTAAT TGGGCTTGTCAGCTTCCACGATTTAACATCATTGCGCTCGCACGTAATGC GAGCAGTGCCATGAGCAGTAGGACAAGCGATCTCGCGACGAAGATGACCT GTGTGTGTGGTGTGGGTGTCGAGTGCCCTACATGCCCCCCGGAGCCGTCA CGGCCTCATTGGTTCCTTTCTGGAACACACATGGTCCAGGACAAGCGCAT GAATTCTACTACTAGTACCAACAACCCCTTTCCCCCAGATGCAGATGTTA GGTTAGGTAGATCGAACCCTTTTGATGCCAGCTAGCGGATCCTGGACTGT ACCCTGGACGCGTTGCATGCAGCCTAGTAGCTTCTAAGCTGATCTTTCAA GCAAATCTTCTTAGTTAAAGGGTATTCTGTGCTTTCTGACCGTGGCGTGC AAGGAGTAGACTGTTGGGTAGGTCACAAGAAGAAGCAAAAGAGACCGAAA GTCTGGGGACTGTTTGATTAGAGGGGGATAATGGGGAGGCTTTTATCATT ATCCGCGATGATATCCTCATGCCACCTGGAGATCGGAGCCAGAAAGCCCC TTCTCTTTCTGTCCCGAGATGATGACTTGCAGATAAACAATCTCCTCTGA AACTTTTGTGCATATAGTGCCTAGTGCCGGTGGAGAAAGTGTGGCTCTCG AGTGTCGGAGGAAAAGAAGCTCATCGATCTGACTGTTTGTGCAGGCGAAG AGGGTGCAGAAGTGCGTGGAGGCGCTGGACGTGCTCAAGGTGTCGAACGC GCGGCTGCATCAGAAGACGGCCGTGGTGGTGACGACGAAATGGGAGACCT TCGACAGCGCCCCTCCTGTCACGACGCAGTGGGAGCTCTTCGACTGAAGC GGCCGCAGCGGAGATTTTACATAGAGTGCTCGTTTGATATACAGAATGTT TTTGTCGTCTGTTTTAGTTTTGAGTGTCCCCCTTGCCCGTTATTCGTTTT GTAATATCGGTGAGCTGGTTAGGTTTAGATTTGCAGCTGCGGAAGGACAG GATCGCACTATTTGTTTTGCTTGTAATCATCGTTTGTCAGTCATACCGAC CCACTCGATTTGAGTGATGGATCTCACTCCAATAAACAGAAAGCAGCACT CGCTGCTCTTTAGTGCGCTCTTTCGCTTTTAAGTGTACTCTTTGAGTGTA ATGATAAGTGTGTGTACATGTGAGCTGCAAGCAAAGAGTTGATGGGTTTC AGGCGCAGAAGAGCATATAGTGGTACAGTTTTTGGCGCTGGCATCGTTGA AGAGCAGCGCACCTGGACGGAGTAGCCAGCACCTCAGCGCCTTGGTGGCT AGGATGCCGTCTGACTGATACGGCGCCGCGCGAGAAGAAAGGGACTGCCA TGCTGCCGTGCCTGCTAGGGCAAGAGCCTCGGCCAAACGACGAGACCAGT AAACCACACGGCTGGACATTCCACGTTCCAATCAGTCAAGAGATTACATA TCGCAGACTCCCATACTCCCATGCTCCCATCCCAGCTATGTGCAGGAGAA AATTAACCTCCTCAACGAAGACAATCATCACTGCACAAAGTAGATAAGAT GACCAGAACATACACTTGCATTGCCACAAATTTATCAAAATTTCAGACTA CCAAGATTGTGCACAAGAAAAATGTAACCCATGTAGAGTCGGTACAAGAA TCGTCCTGCTGCTGCAAAATCCCCTTGTTATTCGCCTTCGCCTTCAGGAC AGAGGCTCTACTGATTGGTTTCTGACTCAAGCACACTCAGTGCCACAATG TACACAGACTAGTAATTAAACAGGCCTTGATTAACTGCACCTCCAGCCTA CTGCACGATGCGGTTCCAGGGATTCAGAGTCAGGCTGCACTGCGGTGTTC TAAATCTACATTTGATCCCAGTCAATAGCGCCGTGGTTTTCAAAACTATA CCCAGGTTGTCGTAGACGGTTGCGTCCCAGTTTGCTCATTGTGGAAAGGC CTGAAAGTAACATACACAAATTTTAGCACAAGTTCACATATTTAGTAGGT ACAAAAATTCGGAAAGACCCTGGCAGTGATAGCCGGAAGGTATCTTATGA TGCCAATGACTATGGTACTTAGATAAGTGTAGCTAACTTCCATTTCACGC ATTTTATAGCATTTTGAAAGCATTACTAAAATGCAAAAGTGTGAAGGCAT GTCAGAAAGTGAAACTGAGCAGTGACAATACCTTCGATGACTTTGTAAAG TGACGACCACCACCTGTCAGGTGGAACCTCATACTGAGTGAGTGATTCCT CGATTTCGGTGTTGTGCTTCCCTTCAAGGACGCTCTGCAGGGTGATTACC GCCTCCTTCGTTTTCCTCAGGATGTTGTTTCCCTCAGCAGCCTCCAGTGA GAGAAGGTCGCTGTGTGATGACGCGAGGCTAGCAGCAAGCGCAAACTGGG CAGCAGCAGCCCATCGGTTAGACGCAACCCATTTCTTCTGAATATCCTGC AACTTACTTTCTTCCCTCCGCATCCTCTCCTCACCATCCCCAAGTACGAG ACTCTGTCAATTTTTCATAGAAAAAAACTGAATCAGAATACATATCAATG TGATAACTGAAAGTAAGGCAGCTATGAACTTATGCCAAGGAGTATATCAT GGATTACATGTCCGTAGTAGTAGACATGCAGTAGTCCCAAGTTAACGATA AACATGTGTTGTTGGCTCTATTCTATGCAGAATAACACATGGCAAGATTA TAGACGATGCACATGGTAGCAGATGCATATTACCTTGAGATATTCTGCAT TGCTAGGCCCTGTACTCTGAACCATCTTAGAGAAAGCACCTTCCTCATTG CTCAGAAGATGCTCAGGAGTGTCAAATTCCTCAATCTGGAAACAAAATCA TATGATTTAAAAATTGAGTTTGAGATACCAAGTGTTGTGCAGTTGGAACA AGTAGAATAAACCATATATTATTGAATATGAAAAGAACAAAGCTCTATTC AAATGGGATGAATGCCCTAGAGTGAAAGAACAAAGCTCTATTAAGAATCA TACCTGCCCAGAACTCAGAATAAGCAACCTGTCACAGTCAATGACGGTGT TCAGACGGTGAGCGATTATTAGCATTGTACAACTCTTGAATTCTTCTCTG ATTGTCTTCTGTATAAGAGCATCAGTTCGAACATCAACTGCTGCTGTTGC CTCATCCAGAACAAGTATCTTTGCCCTTCGTAGCAATGCACGAGCTAAAC TCAGCAGCTGTCGCTGTCCAACGCTAAAATTTTCACCAGCCTCAGAAACC TGCCAGCAAAGTAATTCTCAATGCAAATTTTGTGTACTACTTATTCTTAA AGAACACGGGAGCTACTCTAAGAGGTAAAAGGGACCCAAAGTCTCTGGTT TAAATGTTTATTCAGCATTAAATTCTGGATGCTGACAACAGCAGTAGTCT ATTGTTCAGGAAACCCTTACAATATTCTAATGAAACTCCTAGGACTATAT AGATTGCCAGCCGCTTACGACTTCCATGTGCAAGCATTTATCATTTGTCA AAAGAACATATCCAAGAAAATATTAACTGTATTAGATTTAATGCTACAGC TACAGACAGTTTTCTTACGGAATCAATTTACGGATATACGTGGATGAATA ACAGAAGGGTTAAGGGCGGAAATCACAGAAGGCAGGCAGTTTTGAACCAA CACGGTGCCTCCACGTCAACCGTAAGTCTAGTCCGTAAAGTAAATTCCGT AAGTCTAGCATTTCTGAAGGCAAACATGCAGCATACCTCAGCATCTAGTC CTAGAGCATTCCTCCTTATGACATCCTTTAGATGAGCCCTTTCAAGAGCC TCCCATAAATCTGCATCGTTATGCTCACCAAAAGGATCCAGATTAAATCG AATAGAACCTGGATAGACATTCACAATACCATCATTACAATAAATAATAG AAGTCTTTATAGAATAATTTACATATGAAAAGCTCATGTATTTTCAGTAA CAAACCTGAAAACAAGACTGGTGCCTGTGGTATTATTCCTAAAACTTTCC GCAGGTCCCAAATTCCAAACTTAGAAGTGTCACAATCATCAACCAATATC CTCCCTCGTTCCAGTTCCACAATACGAAACAACGCATTAAGCATGCTAGA TTTACCAGCACCTGTTCTGCCAACGATTCCTACCTTCTCACTTCCATTAA TAATGAATGATATTCCATGAAGAACAGGAGGAAGCTCCGGTCTGTACCGA AGCACAACATCTTCAAACTTGATGATACCAGACGACGGCCAACCAGGAGG TGGCCTGCTATCCTCAATGACAGGAGGAGCCTCAGAAGGTAACTCGATAT ATGTTCCCACACGTTCAACAGCATTCATACTATTTTCAGCTAGACTAGCA AGACGAAGAACAGCTGTGAGCAAATTGGTTATATTGAGAGTATAAGTAAG AAGTAGACCCATTGTGGAAGCAAAGGCCTTCTGATTCTCGGCTCGTTGGT TTTGCATGACAGCAAATGTTGCTGTGAACCATATCATGATACCACCCAAT GTTTCCAGCCGGATGGCTAGCCATCTATTCGAGCTCATGTTCACAAGTGT GAACCTGATGTTGTTGTCCATTGATTTCCCATTGATGTTTGACATTCTAT CATAAGCTTTGTAGGCACGGATTGTGGACAGACCATTCAATGCCTCTGAA AACTGAGCATACACAGGAGACCTGGTAATGGAATCCATGCGCTTCACCTC GCGTGATGTAGCCTGAAAATACAGTTATAAAATGTCAATAAGGTAAAAGT AACAACAAAATGACAGTTGTTTGACAGTAATCGGTTGTGAAATTACCTGG TAATAGAGATAGGCTGCATAAAATAAAATCAGAAGTGGCATGATAGCCCA AAGGGACATGGTGCTGACAACACCGATGAGAACAAATGTTGAGAGCAACT GAGATATTTGTGCCATAAACATATTGACGAAGACAGCAAGATTCCGGTCT ATGTCACCCAAATCCTTAGAAAATCTGTTGATGATACGTCCAAGTGGATT GGTGTGGAAAAATACCATGGGAGCTCTTAATATAGACCGGAGCATGGAGT CATGCAATCTCTTGGCTGCTCGAAGACTTGACATGATTAGCCAGTAAGAA TTCGTGAGAGTGATTAGAACCTAATCCAAAATATTGTCTCTTTGTCAGTT CACACGGAATCACTCAAAAACACACACACACACAAAACAAGGGCAAAACA AAACAAAAATCTATGTGTATAAGTACCTGCCCAAAAGAAAGAATGCCATA AATTAAATTGTAGTATCCAGGGCCATGGATCTTCAGAGGTCCCTGCTCAG TCCAAATGCTCAACCAAGTGCTACTCGAAATGCGCAGAGTTTCAGTCAAT GTATAGCACAAAAAGAGAACAGTCACCGCCCAAATCCCTCCCATTGCATT TTTGTAGCTGCAAAATAAAGAAAGTGAGCATATTTTCCAGGGCATCATGA TCTATAACCAGCACTAGCACTGATTATATCTATCAAGATGTGTTAACATG ACAAATCTAATTGAAATTTATATATGAATGACCAAACATTAAGCAGCACT GAGCTTAATGCTACACAGAAAATCGAATATAGATAAGTGTGCAATTATCA GTAATTTTTATCCTTCCCTATTCCATATTATACATCAAGTATGAATTACA CAACTGTAATTTTTACCGTGAAAGAACCTTTGTGCTGACAACTCCAGTTT CACGCTCCTCTTGCTTAATAAGAACAGATTTTCCCTGTTTGGTTTTACTG GAACTGTCCTGGCTCTTCTGTGGACCATCAGCAGCAACTACAATGCCCCC ATTTTGCGTTTGTTTTATGTCATCCAGTGGTTTGCTTTCGTCTTGTTTTT CTTCCGTTTGTTCCTCCATCTTTCCAGCATTTTCCATGAGCTTCTTGAAG AATTCCCCAGTGTTACTAAGTTCATCAAAGGTACCCTCCTCTTTAATCAC CCCATCATGGATTAGCAGTATTTTATCCACGTATGGCAGGAAATGGAGCT GATTGGTAACGAGGACCCGAGTTTTGTGCCGTAGTTCTTCTTTGATACAT TTATCAAATACCTGAATTCATAAAGAGCATTAGTAATAAGATGTAAGTAC TAAGCAGGGGGGGTTCCTGGAGAAATATATACACAAGCACCAGAAACCTG GCTCCTAAACATGCCGGAACAATGCCATATAAACTCATGTCTTACCATTT TAACTTTGATATCTAGAATCTGGAAACCATTTGGACTATTTGTGCAACAT TTTCCTTCCTTTTGGACATTATTAGGTGTTTATACTATGAATTGCATCTC TAAAATAACTAAGAACTGTGAGTTCAATTACGAGGATATATTGGAAATGT GTTGAAATCAAATTAAGTGTCAATGCACATGTCTTGCACAGTTTCTGGAG AAAGAGCGGCAGTGTTACTGTTTGATCCTGTCTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.