Query (optional)   in Class  

GrainGenes Sequence Report: AA039048

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Sequence
AA039048
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039048
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGCGTCGGTTGAACGCGCAATGGCCAAGGCCGCCGCAGGGCTTCTCCC
GGGTCTGCTCCCGACCCCGCCGAGGAGCACCATCACCACCCCGCGCCTCA
TCATCCTGCCGTCTTCCTTCGCCTCCAAGCCCAAGCCCGGCCGCGCCGAT
TCAGTCGAGAGGTGGGACGCGCACAAGACGGAGAAGAAACCTGGCAGCCC
TTCTTCCTCGTCGTGCGGCATCCCAAGCCCAGGGAGCGCCTCCTCGTGCG
AGCGCTGGGACATGAACACGACGATGTCACGTTCCTCGTCGTCCTCGAGC
TCTAGCGTGGCGTCGTCGTGCGAGAGGTGGGAAAGCAACAAGCGTGCAAC
CTGCGGGCGCTGGGACATCCACAAGAAGTGCGGGAGCAGCAGCAGCACGT
CCTCGTCGTCGTCGTCGAGCAGGGGAAGCAGCGCGGTATCTGGCAGCGCG
TCCTCCGCCGATCGCTGGGACACGCACAAGAAGGCTCGTTCGGGACGGAC
CGACGCCGATAGCCGGACGGACGAGCAGGAGGAGATGGAGATCGACGACA
AGCACTCGCAGGAGAACGAGACGATGGCAATGGTTCCGACGGCTCCACGC
ATGGATCTCGTGTTCTCTGGATCGGGCTTCTTCGCCTCGCTGGAGCCGAG
CATGCTTCCCATGCCGGCCTTCTTCCGCTCCCGGTGCCCAAGCATGATGC
CTATGCCAGCGCACTAGGTGCTCGTGCAGAGTATAGTAGTTGCACGTGTA
TGCTGTCAAGCTTCAGAATTCTGTGTAGTTTGCCTCCTGAATTCTGACCA
CGGAATCGAAGTTGTTCTGTTCGTAATCTCAGTACGTAGCATTATTCTTG
CGGGTACACCAGTTCGCAACTAGTTTGTACTACTGATTGATTGAGAATTT
TCAACTCTTGAGTTTATACCTGGTAAAGGTTCATCAAATTTGTAAGTGGG
ACTGCCAAAGCTAACAGAGTTCTCTCTCGTTTGTATTCTTTAAAGAAAAA
CGGCAAAAGACTTGCCATTTTTATTAAATAAGGAAAAGTTTTGGGAGTGA
CTATTAAACAGCTAGCTGTTTTGAAATTGAGAAACAGACAGATTTTTAAA
CCAACAAAACGACAGCTGTCATACTGAGAAACAAATGGAAAAATAGAGAA
AGTTGTCTGTTTTCAGTTTAACAAAACAGACACATTTTCAACCCCACGTT
GAATTTGAACGTCTCATTTTTTGAGTCAAAACTCTCGAGTCTGTAAGAAA
AAAACACTCATAACACATCTAAAAAAACCCAATAAACTCTACGTATTAAC
GTTGTGTCAGGTCATCTTCTCCGTCAAAAAAGCAGCTCATGCACAGTCGC
CACCAGCTCCATCCCTGATCGGTGGTCATTGCTTCACGGTGGGGGAATAA
AGATCCAAGTTTAAGGTGCATGCAATTCATCAGATGAATTTACACAGTCT
ATCAGCTATATGTAGCTATCGGTTGAAGCCAACAAATCTTTATTCAGAAA
ATAAACAAATGAGACGACCTTCTCTAGCTTCACTTTAAAAACGTGCATGA
CCAACCATATAACACTACAAAAGTATAAGCAACAGAGAGCTATACTTCCA
AATATGGCTATACTTCCATATATGTTTTCGGATTCTTATTCGGTTCGCAG
TCAGGCATACAAATCAATGATGAAGCATGATAAATAGGCCAATTTTGCAG
AAAGTGCCAACACAGCATCTATTATGTCACAAAATTCCCAGTAATAATCC
TCATCAATTTTCTTCCCCCCAAAAAAATCTGAAACAGATCTCGCTTTCAT
ATTATGAGGTATCAAAAATATGTTAATCCATGTTGTCGCTATACAAACGA
AATCATTTTCTCATACATGAATTGAGACTTCGGAAAATAACAAACACCAG
AGAAAATGATAAACTTATCTAATGAAACAAGGAAAATCCAAGGAATGAGT
GACTGAAATACTAAAACTTGACACTGAAAGATAGAACATGGAACAAAAGG
GGGCCAAGCAGAGTGACAAAAAGCTAAAAAAGATACATACCAAAGAAATG
ATAAATAGGTATAATGAAAGAATGACAAACCGAAGAATTAATGACTGAAA
ACTGAAATACTTAATACTAAGGGACTGAAAGAAAATGGATTAAACAGAGA
GGGACTGAAAACAAGAAAAAAAGGCCAAAGATTGAGTGATTGAGAATTGA
GAGAAGGAAAATGATAGTGATCCTCCGGACGATCGCATCGTCCTGATCTT
TTGTTCCTGCCCACTCGCGCGGACTCCCGCGTGCATGGCCCCACCCGGAC
ACAGCTCCACATGCGTGGCCACATCCCTCTCTCTTCTTTCTTCCTTATCT
TCTTCCTTTTAGCTCTCCTGACCTATTTGTTTCATAGATCTCGTGCAGCC
GGCAGACCGCCCAGCACTAGCCATCCTCATGGGCAGGCCATGTTGCGCCT
CTGTCTCTTCTCCACCCCTCTCCCTCGCGTTGCCTCTGTTCCTCTCCCCT
ACAACGCGCCCCACCCCTTGACGAACGGCCATGGCCACCCATCCTCTCGG
GCGCCCTAGCATGTTCTGGAGATGCCGGCCTCCCCGGTAGTCGTGGTTGC
TACCAACGACAGACGGCGCTGCTGCAAGGGGTACGAGGGGATGCTAGCAA
CGGCTGATGTTGTTGCTACCTGCACGGTGACGGATTTTTTCTACCGACGG
TCGGTGTCGTCTCTACCAACGGCTAATGTATTTGCTACAATAGTATAAAT
ATTTCGCTACAATCATTCTCCTATATTTTGCTACGATATCCCCGATGAGG
TCTCCGACGAGGTGTCTAGAAAAGTCTCCAGTGAGGTCTCCGGCGATGTT
AGTTTTTTCTACATTAGAAGAACTTTGTTGCTACAACCGTGTTTTGCTTT
TGCTACAACAGTGTCAATTTTTTTCTACAAGGTCTCCGGCGAGAGTCACG
AGCGAGTTTATTTCGCGATGTTTCCGGCGAAGTCGGTTTTGCTACATTAG
CATAATTTTTTTGCTACATGGTCTCCGGTGAGACGGTCTATTTCTAAAAC
GAATCTTTTTTTTGCTTCGGAAGCAAAAGCGGGGACATATGTAGCAAAGG
CAGGATGTTTTGCAGCAAATGGAACGTGACAGCACGGGAAGCAGGACGAT
GGGAGCTCCCCCATCATCCGGGGAACGCGTAGCACTTGCCTTGAGAGAAA
TTAAGAAAGAAACTGAGACTATAAGATGCTGAGAGACTAAACAATGAGAC
ACTAAAAAAATTAACTGAAAAACATACATAATAAAGAACAAAGAAAGCGA
CATTCCGACCAAAGAAAGAAAGGTCAAAATTGAGTGATAGAACTGAAGAC
TTAAGAAAGATACTTGAGGCAATAAGATACTGATAAACTAACTAATGAGA
CTAAAGAAAGAATGAAACTGAGCTAATAGAACGAGGGACTTAATCTTAAG
ACCGAAGTTAAGAATTACTGAGAAAATAAGTCTAGAAATATGAGATAAAA
ATGAATGAAGGAACTAAATATACTAAAAAAGACAAAGAATGCGCACTGAA
AGAATAAAGACTCCGATTGAAAAGTGGGGACAACTCCAAACTAAACTAAA
GAAATAAAAGTGAGAAACATGAATTAAATGAAGAGGAACTAGAGAAAAAT
GAATTAAATAAAAATAATGACAACCTAACAAGAATTACAAGGGATAAAAA
TGATAAAAATAGAAAGACAACAATGACTGAATAATGAGAATGGAAAAAAG
GAGACAAGAATAAGACAGAATCAAGAAAGTAGCAAGACTCGATAGAAAGA
ATGATAAAAAGAGAGTTCCTGCTTCGTGCTCCACGATAGCCCTCTAACTC
TGATGCAGAGCATAAAGAAGAAGAACCAATTACCTGAATGTAACACCTTG
GACTTCCGAGAGCACTAGCCCAAGCAATTTTCTTACATGACAAAAACGAC
ACAATAATGACACTCGGTTGTAGTTTCAATAGTCCTTAGTTGGTAAGCAG
ATTAGACATGAAACAATAATTTTTCTTACACCGAAACTAGCAGCCTGGGT
TCACACATCAGCCGTGAAAACAGAAAAAATCAACAAAAAAACTACCTTAA
ATAACCACACACCGGTGAACAATCCAGAACGGTTGCCGCAACACAACTTA
AAACATAGAGACAAAGATAAACAATAATGATGAGGAATAAGAGGGGAAAT
CCTATATCCGCTCTCCCGGCGACAAATCAACTAACTAACAGCTACCGCCA
TAACGCCTCAGGCCACCCGAATCGGATAGTTAGCCGTTGCTCACACCAGG
ACATGCCACGCACGACCCTACCGCTCTCCAACTACATCTGCCGCACTACC
ACCAAATTACGAACCACAGAAAATAGAACACTGAATTCTCATATCTCCAC
GCGGAGAAAAACTACCAATGAGCAATGATGACTTGGTGAGAGACCGATAA
GGCGTGACAGTAGCGGCGGACAGCCTAACCATCGACACCTGCTGGGAGGC
CGAATAAGCGGAGATGGTGTTATCAATGCTGGTCTAGGGGTGTACAGTGT
ACTACAACCTGAATAATATTGGCATCCTTTGTGATTGTAATATTGCAGGT
TCTGAATCATAATCAAATCAGGACCTGAACACATGTAAAAGCATCATCAA
ATATCATGCTATTTCGAAAAAATATGTACACATAATTAAATAGAACATCC
TGTACACACGAAGACCCTAATCAATTCAAGTTGTGCATGCCCCTATATCA
ACATCAGTTCAAGTTGTTCGAGCACCACACATTGAACAAGATGTGAGCAC
TCCCAAAAATAGATGGAAACAAAGAAAAAAAACTAAAATCGAACTGAATC
CCAATGAATTCGAGTTGTTTGTGCTAAAAATCATCTTACAAACACTAGAA
CCTGCACGACGAAAAACTGAAGGCATAATAAGGAGATACACGGTGCTTCA
ATCCCCTTGGTGCCGAACCAAGCCGTGGACTAGCTCATGCTAACACCACT
GTCACTCGTCCTAATCCGTGCTCGCGTCTCAGGAAGCAAATGGTACCCAC
ACACGTCTTGCCCCCGGTAGCGCCACCGACGAGACCCAAATGATGACCAA
AATCATGAGCTAGATAGAAGAAAACCAGAGAATAGGGAAGATAGAGGGAC
AAGGCCAGATGAATACCCATCTCGCCGCCGGCGCGAATGCCTTCCATGCT
CGTGAATCGGCGATCCCTTCCCTGTAGGACGAGGACAGGTGTGAGCCACG
GCTCTCTCCATCGCAGCTAGCACCGGCTGCGGGGTCACCGTCTCTCCATC
GCAGCTAGCACCGGTTGCGGGGTCACCGTCTCACCGACATCGGCCGAGTT
AGTTGCGGCTTCGCCGCAGACATCTCCGCCATGGCTTCCTGCTCTCACTA
CAGGACGCGCGCGCTACGCCGAGGGCAAAAAGCCGTCGGCGTAGGCCAAA
ATGCCCTCGGCGTCTGGTACGCCGACGGCTGCCCTCGGCGTAGCCTCCTC
GGAAAAGGTCTTCCTCGGCGGAGCACACTCAAGCTGTCGGCGTATCGAAA
TGCCGTCGGCGTAGCGGCCGTCGGCTGGTTGCAAAATAATTTTTTTCTCA
ATTTTTTTATTTTTTGAATTGTTTGACTCGTTAATCTCCCACTTTGAACA
TTTTTAATACTAATTATATTTAATATTTGATTAAATTTCAGTCTTAGTAA
AACTTTCCAGCCGCTGACCCATCCTAATACTACTCCAGCTCTAGCACGCT
TAACTTCCTCGTTCCTACAGAATCCGTTTCTGCAAAGTAATTCATACATT
GTTGTCAATACTATGATATCAGTCTTATTAACTCTTATATCATCATGTCA
CATGTTTGTATTTTTTTAATTACAAACAATTATTTAAGTAAACATTAATG
AATAAGTAAAAATATTATTGAATTCAAATAAAAATATAATAATTTTAGTT
TTGTATTTTTCTATTTAAGATAGAATAATTAATATCTTTAAATCTGTAAA
TCGGAATTCGACAAATAATATGTCTAAATTGATCAGAAAAATGAGAGGAA
TCCAAATATGATATCCATATCAACTAATCACAAATCCTCCGTTTTTGAAT
TAGCTATTTGGTGGTTGCTTTAGAAAATCCCTTTTTGCGCTTGAATAATA
AAAAATAGCGTTTTGGTGCGATGAAAAGGAAAACTTGCATTGGATCTTTA
ATAAAATAGCATATTGTGAACCTAAAAATGTTTTGTAAAAAAATGAGCAT
CGGATCATGTAACTGTAGTTCATATTTGACCCACTTCCTACAGATTCGGT
AGAAATTTGTCTTTTTCACCAGAGGTGGACGGAAAGGTTTCGGATCCCCC
TGTTGGGACATTTTCCATATAAGGTGGTATAGTATTTTTGTAAAATATGG
TGGTAGCATTTTGAATTAGCAATTTGGTGGTTGCTTCACAAAACCGTCTG
TTTTTTGTACTTGGAAAATGGGAAATGCCTTTTTGGTGCGACGAAAAGGA
AAACTTCCTCCTGTAACATTGTTCTCCATCCCATGATGCACGTGTATGCA
CAATATGGGCACATTATCACAAACTATGCCTTAATTCTAGCCATAACATT
GGTCATTTGATCTGAAAGCCAATAAACCTCGAATGAGATAGGTCATTTTA
TGAAGGTTTTTTTGAGACATAATCAATATATCAAGTTTTATATTTTTCCT
TATAACTATGTCACATAATATGACACCACGCGAAGGTTTCGCATTGTTTC
GATCGTTTTTGAAATTTTTATGCCCGTTTTAAACTATCGTCAAACTTTGT
CGAACGACGGACATGAAGATTCTTAACTCAGAGCCGAGCCTCACTAAATT
TGCATTGGATCTTTGATAAAATGGCATGTTGTGAACCTAAAAATGATTTT
TGTAAAAAAACATTAGCATCAGATCATGTACCTGTAGTTCATATCTGACC
CACTTCCTGCTGATTTGGCAGGAATTTGTCTTTTTCACCAGAGATGGACG
GAAAGGTTTCAGATCCCCTTTTGGAATATTGTCCATATAAGGTGATATAG
TGTTTTTGTAAAATGTGGTGGTAGCATTTTGAATTAGCCATTTGGTGGTT
GTTTCACAAAACCGTCCGTTTTTTGCGCTCGGAAAATGGGAAATGGCTTT
TGGTGCGACGAAAAGGAAAACTTCCTCCTGCAACATTGTTTGCCATCCCA
TAATGCATGTGTATACACAACATGGGAATATTATCACAAACTATTCCTTG
ATTCTAGCCATAACATTGGTAATTTGACCCGAAAGCCAAGAAACCTCGAA
TCAGATAGATCATTTTGTGAAGGTTTTTTGAGACATAATCAATATATCAA
ATTTTATTTTCTAATTATAACTATGTCACATAATATGACACCACGTGAAG
GTTTCGCATTGTTTCGATCATTTTTGAATTTTTTATGTCCGTTTTAAACT
ATCGTCAAACTTTGTCGAACGGCGGGCATAAAGATTCTTAGCTTGGGGCC
GAGCCTCACTAAACTTGCATTGGATCTTTGATAAAATAGCATATTGTGAA
CCTAAAAATGATTTAAAAAAAACATGAGCATCAGATCATGTACCTGTAGT
TCATATCTGACCCACTTCCTGCCGATTCGGCAGGAATTTGTCTTTTTTAC
CAGAGGTGGACGGAAAGGTTTCGGATCCCCCTATTTGGACATTGTCCATA
TAAGGTGGTATAGTTTTTTTTGTAAAATGTGGTGGTAGCATTTTGAATTA
GCCATTTGGTGGTTGCTTCACAAAACCGTCTGTTTTTTGTGCTCGGAAAA
TGGGAAATGACTTTTTGGTGCGACGAAAAGGAAAACTTCCTCCTGCAACA
TTGTTCGTCATCCCATAATGCATGTGTATGCACAATATGGGCATATTATC
ACAAACTATGACTTGATTCTAGCCATTACATTGGTCATTTGACCCGAAAG
CCAAGAAACCTCGAATGAGATAGGTCATTTTGTAAAGGTTTTTTTGAGAC
ATAATCAATATATAAATTTGATATTTTTCCTTATAACTATGTCATATAAT
ATGACACCACGCGAAGGTTTCGCATTGTTTCGATCGTTTCTGAATTTTTT
TATGCCTATTTTAAACTATCGTCAAACTTTGTCGAAGACATGAAGATTCT
TAGCTTGGGGCCGAGCCTCGCTAAACTTGCATTGGATCTTTGATAAAATA
GCATATTGTGAACCTAAAAATGTTTTTTTATAAAAAACACATAAGCATCG
GATCATGTACCTGTAGTTCATATCTGACCCACTTCCTACCGATTCGGTAG
AAATTTATCCTTTTCACCAAAGATGGACGGAAAGGTTTATGATCTCCCTA
TTGGGACATTGTCCATATAAGGTGGTCTAGTATTTTTGTAAAATGTGATG
GTAGTATTTTGAATTAGCCATTTGGTGGTTGTTTCACAAAACCGTCCGTT
TTTTATGCTCGGAAAATGAAAAAAGTTTTTAGTGCGACAAAAAGGAAAGC
TTCCTCATACAACATTGTTCGCCATCCTATGATGCACATGTATGCACAAT
ATGGACACATTATCACAAACTATGCCTTGATTCTAGCCATAACATTGGTC
ATTTGACCCAAAAGCCAAGAAACCTCGAATGAGATAGGTCATTTTGTGAA
GGTTTCTTTGAGACATAATCAATATACCAAGTTTGATATTTTTCCTTCTA
ACTATGTCATATAATATAACACCACGCGAAGGTTTCGCGTTGTTTAGATC
GTTTTTGAATTTTTATGCCCGTTTTAAACTATTTATAATGTTTTATGTTC
TACTTAATTTTTATTTACAAATGTGTAATATTTGAGTGTAGATAGATATG
TCTTATTTTTCTGCAAATTTTGATATATTATTTGTATTTTTCCGAATTAG
AATGATTTAGTTATGATTTAGTTAATGAGATAAAATCAAAAATAGCTACG
CCGACAGCAGCCGTCGACGTATGCTACGCCGAGCGTAGCCGTCAGCGTAG
TATAGGATATACCGATGGCAATTTTACGCCGATGGCTACTTGGTAGGGCT
GGCCTGGACGATGGCTACGCCGACGGCCACGACGTTTGGCCGTCGTCGTC
GTATCGTGTAGTGCCTTCTCCCGAGCACATAGAGTGGTGGCTTCCACGGA
CAACGAAACTGAAAAAAAAAACTCAAAATAGATATATGACCCAACACACA
GGACAGAAAAGGAAAATCGAGACGTTTGCAGCAAAACGAGAATTTAGGAA
AAAAAAAAAGGAACACGTGGCGGCGTGGGAAGCATGAAGATGGAAACCTC
GTCCGGGGACGCCTAGCGCTGGCCAAAAGAAAAACAGAGCTTTGTCCAAA
GTTGAGTCCAATTCGGAGTTGCGGCAGCCTGCAAGTGAACTCGGATTTTG
CTCTCTGCTGCATCCCGCATTCCCGCGGGAGATTGTCGTTCTTGGGTCCG
ACTCTGCGTCCAATTCTGAGGAGTGGCACCAATAAATATGCACCCAATTC
GATCCCACACCCCATCAGATCATCCATCGTTTCGTTCCCCAGCCGGCAAG
CACATCTCTCTCTTCTGAATTCTGAGCACGCTTGTGAATCAAGAAGATCA
TCTATGGCGTCGGTTGAACGCGCAATGGCCAAGGCCGCCGCAGGGCTTCT
CCCGGGTTTGCTTCCGACCCCACCGAGGAGCACCATCACCCCGTGCCTCA
TCATCCTGCCGTCTTCCTTTGCCTCCAAGCCCAAGCCCGGCCGCGCCGAC
TCTGTCCACAGGTGGGACGCGCACAAGACGGAAAAGAAACCTGGAAGCCC
TTCTTCATCGTCGTGCGGCAGCTCAAGTCCAGGGCGCGCGTCCTTCGTCG
ATCGCTGGGACATAAACAAGAAGTGCGGGGGCAGCACGTCCTCGTCGTCG
TCATCGAGACGGGGAAGCAGCGCGACGATACCAGCCGGTCGTGCTTCATT
GTGCGAGAAGTGGGTCAGCAACAAGCGGGCTCCCAGCCGCGCGTCCTCCG
CCGATCGCTGGGACATACACAAGAAGCCTCGCTCTCCACCGTCTGACGCC
GAGAGCCGGACAGGCGAGCAGGAGGAGCCGGAGATCAGCGACGAGGAGCC
GCAGGAGGACGAGATGATGGCGATGGTTCAGGCGATGCCGCGCATGGAAC
ACGGTTTCTCCGGGTCGAGCTTCTTCACTTCGCCGGAGCCGAGCATGCTT
CCCATGCCGACCTTCTTCCGCTCGCGGTGCCCAAGCATGATGCCTGTGCC
CGCACACTAG

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