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GrainGenes Sequence Report: AA013012

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Sequence
AA013012
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA013012
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTTTATTTTGGTATACTGTTCAACTGAGTCAATGCAAAGTCTCCGAAGCT
ATACATCGCACTAATAAATGTACCCCATGGCCATGTGCAGCCAGCAATAA
TTGAGAAGCTTTGGATCGGAGGAGCCTAGGAGGCAGCACTGCAACCTGCA
GCCAGAGGCAGAGCTGAAAGCTCGCTGCCTCGCCGGACCCCGGCGCCGCG
TTGCCGGCTGAAGCAGCAGCACCACATCAGGCCGTCGTCCACCGACAACC
GCGACGACCGACGACGCGGCACCGCCGGGACTCCAGACTCGATCTCTGCT
TGTAAGTTCCAATCTTGCCTCTGCCCAACGATGCATATGTGCCCTTTTTG
CAGTTTTGTAATCAATCCTCGTGGTTTTGCTACTGAAAGCAAGATTCAAC
AAATTTGTTGCCAACGTGGTAACTTTGTCTTGGATGACTCTAGGTTCTCA
GATCTGAAAGGTGTTGGTCATCTTTGCGAAAAAATGGGTTGGTTTTACCA
GTTAAGAGAGCATTTTCGTCGGATCTGTCATGGGCGTTTTTTCTTCTTCT
TTTGGACAGTGGTTGTTGCCATGGTTATTGTAATGAAATTTTACTCTGTT
GCTCAACAGCATAAGTTTCTTTTTCTGACAGAAGTTTCTCCGCTGAGAGG
GAGAGCAACAATGGCAGGGGCTCTCGTGAGCGCATCCACGGGGGCCATGG
GTTCCCTCCTGGGGAAGCTGGGCGATATGTTGACCGATGAATACAAGCTA
CTCAAGGATGTCCGTGGCGGCATCCAGTTCCTCAAGGACGAGCTGGAGGT
GATGAACGCATTCCTCCTGAATATGTCAGATGTGGAGGAACCTGACGAGC
TAACGAAGCTGCGCGTGACGGCAGTGCGGGAGATGTCATACAAGATAGAG
GACAACATCGACAAGTTCATGGTCCTCGTGGAGGAACATAAGTCCTCCTG
TTCCGAGGCTCATGGCATCAGGAAGCTCATTGAGAAATGCAACAGCTTGC
TGTCCGATATCAAGACCCGCCACAAGATCGCCAAGGAGGTAAAGGACATC
AAGAACCAAATTAAGGAGGTCAGCGACAGATTTTTAAGGTACATACTTAC
CAGATCTTGTTTTCAGATCCATCAAAATTGTGTGACTAAGCAGATGCTTG
TATATATATCTGATGTGTTGCTGGATCTACCATTGAAGGTATAAGACAGA
TGAGTCATGCACCTCTACGCCTGCAAAAGACAAGGTCGACCCTCGACTTC
GTGCACTCTACAAAGATGCCATGGAGCTTGTCGGAATCGATGGACCAAGA
GATGAACTTGTTAAGTGGCTTAATGAGAAACAGGGAGAATCACTTAAATT
TGTCTCTGTTGTTGGATTTGGAGGGCTAGGCAAGACAACACTTGCCAGCC
AGATTCGGATCAAACTTGGAGCCACCTTTGAGTGTGGGGCTTTTGTCTCC
ATTTCACGCAAGCCTGACATGAAGGCAATATTAAGATCTATATTATCACA
AATCACCAAGCAAGACAATGCTTACTCTGGATTAGATGATATACATCTCA
TTATGGATAAGATCCGAGAATTCCTCCAAGACAGAAGGTATGTATGTACA
AATTAACGTTGGTTAATTAGCATCTAAGCCTAGACTTTTGCTAATGATAT
AAGATACAAATTCTGAGAGCATCTGAGCTAGTACCTAGTATCCTATATAT
GAGGAGTTGCTATATTTTGATTTTCTTTCCCATTTGTAGTGGTGTAGATG
CTCCCAGAATTTCACTTACTGTACAAGTATGTTTTAGATGACAGCTTTAT
TGATGTTAGAAGTTTTCATCAAGGTATATTATACCTAGGATACACACAGA
TGTGACTCTGTTTTAGGATCTTACGATACTTGATCAGTATCAATATAAAT
ATCTAATGAGCTCCAATGTGTATCACTTGTTGCAGGTACTTTATCATAAT
TGATGATATATGGGAGTTAGGAACATGGGAAACTTTGAAATGTGCATTTG
TCAAGAATACATGTGGCAGCAGAATAATGATCACAACACGTATAGTTGAT
GTTGCCAAATCTTGTTCTCCTACTAATGAAGATCTTGTCTATGAGATGAA
ACCACTCAGTGAGGCTGACTCAAAGAAGTTGTTTTTCAAGAGGATATTTG
GTTGTGAAGAAAGCTGCCCTGATAGCTTGAAAGAAGCTTCCATAGATATT
TTGAAAAAATGTCGTGGTCTACCTCTGGCCATTAATGCCATTTCTAGCTT
GTTGGCCACAACAAGTGAAACAAAAGAAGAGTGGGAGCGGGTGCGACATT
CAATTCGCTCTTCAAATGCCAAAAATGATATAATAGAGACCATGAATTAC
ATATTATCTCTTAGTTATTTTGACCTTCCTCACCACCTAAGAAGCTGCAT
ATTGTACTTGGCTCTATTTCCTGAAGATAAATTGATTGAAAGGGAGAGGT
TGGTACGCAGATGGATTTCTGAAGGCTTTATTCATGGAAAAAGTGGACAA
GATCTCATGGAATTAGGAGAGGAATATTTTCATGAGCTTGTGAACAGAAG
TCTAATACAGCCCGAGAAGATAGGGTATGATGGCAAAGTGTGGCATTGCC
GAGTCCATGACACCATCCTTGATTTCCTCATTGCCAAGTCCTCCGAAGAG
AACTTGTGTACTGTTCTGAAAGAAAAGTGCAAGCCTGATGGCATTGTTCG
TCGGATCTCTATTATGGGAACCGAGGATGAAGACATCGTAGAGAAATTGG
ATTTGTCACAAGCTCGGTCGATCGGTGCTTTTGGGGACATTGAGCGATTG
CCATCGCTTGGGAAGTCAAAATCCCTGCGTGTGCTGGACTTGCAAAGGTG
CCGTAAGTTGAAAAATCATCATATCAAGGATATTGGAAGACTCTATCAGC
TGAGATACTTGGATATATCTTTCTGTGGAATCACGGAGCTTCCTAGGCAA
ATCGGGGAGCTACTGTACCTAGAGACACTAAATGTTGAATTCTCTAACGT
CTGTGAGCTTCCTGAAAGCACAAATCGGCTACGACGACTGGCACGTTTGT
TTGTTCAGCCTAATTGTAAGCTTCCGGTTGGATTGGGAAACTTGGTAAAC
TTGCAAGAGCTTGAGTGGATTGATGCCTTGCAGTTAAAGCATGTGGAAGA
GCTCGGCAAACTAACAAATCTGAGAAAGCTGAAGATTTTCTTGGATACTG
ATGAGATAGAACGCAACCCATTAGTACAGTCCAAGGAAAAGCTGGTGTCC
TCTCTCTGTAAACTGGACGAATGCGGTCTCTGTTCCCTAAGTATTTCTTT
TCAGATGAGAGATAAGGATGGTGAAGAGCCGTTCCTGCCTGCTTTGGGTT
GCATCCGTGAGGTTATTGTACATGTAGAAGATATCTGCCGGATTAGCAGA
TGGCTCACATCACTTCCCAACCTACACATGTTGAGTTTCATTGATACGGA
CAAGATAGAACAGCAGGATATCGATATGATTGGACTCATACCCAATCTGC
TCGAATTGTCACTTTATTTACATCAAACAGATGATGCACGGCAGCTCATC
ATCAGGTGTGAAGGATTTCAACAGTTGCAGCTTTTTGAGGTTTCCTTTGC
TAGTAACAGAGTTTTAATGTTTGAACCAGGGGCTATGCCAAGGCTCAAGG
AGCTTGAATATTACTTCCATGTGGCTGCGGTCAATTTCGACTTTGGCATC
CAACACCTCTCCAGCCTTGCTCGTCTCAGAGTCATACTATCCTGCATTGG
CTGGACGGCTGCAGAAGTAAAGGGTGCGGAGGATGCTTTGAAGAGCATGG
CCGAGGCAAACCCGAACCGTCCAACACTGGAGATTATCCGTCCAACACTG
GAGGTACACTATTAACAAGTTCCCCAGCACTGCTGCGGGCTGGCCGTGCA
TGCGTAATTGTTGCCCGCTCCGCTCCTGTTTGAAGGGACCAGGAATCCCT
TCATACGAGATCCTCTGTTTAGCGCGCGCGTCTCAAAGATTGTGTTCGAT
TTTGGCATTGCTTCGGTTGGACGGTTGTTGCCGAGAGTAGTAGTATGTAC
TAGAAGGACCTCGCGCCCGTTCCTGTGCACGTTTTCCGTATGCTGGTTTG
TGTATTTTTTTATTTTATTTTGGAGTCCCATCTTTATTATTATTCAAGTG
CCGGTGCAAAAGGCTGCGTGTGTGTCGTGGGCTCTCGTGACTGCATGCCG
TTTCATCTGGATCGGATGTGTTTTGAGTCTTTCATTATGGATGGATAAGA
CCAAAACATGCATGTCATGTTTTTTTAGCATGTCCACGGTCGTTAAATCC
TTCTTTTGTAATTAAGAAGAGTACTAGGAAAATGCCCGCGCGCGTTGCGG
TGGATTCTAAATAAGCCATAACAAAAAGAATTCAAATTCTCGATGGAACT
CAGATGGGACTCTCCGTGATTTGTCTATTGGATTCAGATGGGACTCTCCG
CGATTTGGCTATTGGATTCAGATGGGACTCTCCGCGATTTGGCTATTGGA
TTCAGATGGGACTCTCCGCGATTTGTCTATTGGATTGGGTTTGACGCTCC
TTCCTTCATTATTAGGTATAGACTAGCAAAATGTCCGCGCGTTGCAGCGG
AAGGAAAATAATAAGCTTATATACATTTTCTCCAAGTAAACATATATCCG
CCCATAGGACAAAGAGATCTAAAAATATGTGGGAGATCGAGCCCGTACTT
GGCGTACCTATGTACATTTTCTCATAACAACTTTCCTTGCCCGGTTCTTA
CAGCTATCGACTCGATTCGGTAGCTCGGCTATGATCCCCTTCAAAAAAAT
GTTTTGAGCATTGAGTTGGCCCGCCATGATCCTAGTTTGTGGGATGGGAT
GTACGAACAAGGTGGACCAAGGTGGTATTGTCGGCCGGTTTGGGCCTTCT
TCGTCCGTGTGTGTTCCTTGTACAACGCCGGACGGTGGTACTGAATTGTC
TTCTCCTCTACAGTAGGCTGGTGGCGTGCGGACCTACAAATTCGAAGATA
AGGACCTCCACCAAAAATGCTGTTTACGAACGGTTTCCGGGCCGAACTCG
TATCTAGACCCTTCGTGCGTGCGGTAAGATTCGAACGCCGGGCCCACGGA
CCTCCACAATTTATAGAAAGCACCCTAAAACGAAGAAGCAAACGCAATCA
AGGCATAGGTGCCTCTGCCACCATCGCTGGTGACCTCGGAGGTAGAGCCA
TCGACGAGGTCAGAGCAAAGGGCTCGGCCAAGCTCAAACCAGAGAGAAAA
TCCCCGCAACCGGCCACCTCTAAGCCACCAGGGACAAACCACTTGGCGGA
GAGACGATGGCGAGCACCGACACAGAGGAAGAGCAGCGGCGGAGCGGCAA
CCGTACTTCCATAAGGTCCGGCATGTTGGCGGATCAAGCCGCCAAGAAAC
CGCCAGAGAGAATCTCCAGGAAGAAGCCGCCATCGAGAGCCACCATCACC
TGCAGATAAAGCGACCACCATGGCGCCAGAGCTGCAGAAGGGAAGCCCAC
TACGACAAGTACAACATTGGCTTCCAGATGAAGGAGAGGAAGAGCGACGC
AGCGGACGACATCCCTCTCGCCACCACGGCCGGCCGGGATGAAGAAAACG
CCATGCCAGCCACCGCAACACCGATCTCCCCCGCCACCACGACCGGCCAA
GAAAGGCACCCCGGGTACCACTCCCCTTCGCCGGAAACCAGCTCCTAGGA
CATTATTTAGAGCTTCCGGGCTGTAGATCTAACCAACCCCCTCAGCTTTG
ACCACCAGAGCACCTCGAGGAAGCAGATCAACTCCGGTGAGCTTCAGATC
GAGGCCGCGAACGAAGCAACTCCGGACAGAACGCCCACAACGGCGGTGAA
AGCACCGCAAAACTACCCTACACCTAACCTAAACTACTCTGGCACCTCCC
CCTCCCCTGCCTTGCAAGGAACTATTCTTTTAAATTCTGAACACTGCTAG
GATGTGAAGATACGTGATACGCCTCCTTTACATCTTTTTATATGATTTCA
TGGTTATCAAAATATCCACAAATATCACAATATATAATGGGTTTTACAAT
GTGCGTTCGGGTCATCTAACAAAATTCGTTTGCCTCGGTTCTAATTAATA
GAATATTACAGTGCCACGCCGCGTTCACACCATGCTGTCGGACGTGTGTG
CGCGGCACACGACGAACGAGGACTGGACGGTGGAGTGGGCCAACACACCT
CGTCCCATTTCCGGTGCCTTGCACGGGGAGTCTGCGCGCGAGCCCCCACA
AGACATGATCCTCAGAGGGATTCTGGGCAGTGTCATGCCATTCGTCCTAG
TCGTAGTGGGAGTAACTTGAGTAATAACATAGTCCTACATATATTGCCAA
CTAAGCATTTAGATGACATGACATGTAATTAAATAATGAGAGATAGGCTT
GTGATAACCAGCTATGTTACCATAAAACATTCTAGACAAAATGAGTCTAT
ATTGTAATAAATGAGGTTTTGCATGTTATCACATCTATATTATTTTGCAC
CGACAACCGCGAACCCCTCCACCGACAACCGCGAAGACCGCCGGGACTCC
AGACTCGATCTTTGCTTGTAAGTTTCAATCCCCGCTGCTATACGATGCAT
ATGTGACTTTTCTTTTTTTTTCCAGTTTTGTAGTTAAAACGATTTTTTTT
TCGTAGTTTCAGTCCTGATGGTTTTGCTACCGAAAGCAAGATTGAACAAC
TTAGTTGCCAACTGGATAACTTTGTGAAAGGTCTTGGCCATCTTTGTGAA
AAAATTGGTTGAAAAAAAAAGAAACATGCAACCTTCCGCCTAGTGTTTCC
GTTGCTGAAGCTAATATTGGTTTTACTAGTTGAGAGAGCATTTTCTGCAA
TGAAGTATATCAAGTTGGATCTGCGAAATAGAATAAGCGATGACCTTCTC
AACCATTGTCTCATTACTTATGTCAGAAATTGATGTATTTCAGTTGATAA
GTACTGATGCCATCATGTACACCTATCAAGGTTACCATGCCCTGGTGTTT
TTTCTTCTTCTTTTGGACAATGGTTATTGCCGTGGTTATTGTACTAAAAG
TTTACTCTGTTGCTGATCAGCATAAGTTTCTTTTTCTGACAGAACTTCTG
CAGTTGAGAGGGAGAGCAACAATGGCGGGGGCTCTCGTGAGTGCATCCAC
GGGGGTCATGGGTTCTCTCCTGCGGAAGCTGGGAGCTATGTTGACCGATG
AGTACAAGCTGCTCAAGGGTGTCCGTGGCGACATCAAGTTCCTCAAGGAC
GAGCTGGAGGTGATGAACGCATTCCTCCTGAAAATGTCAGATGTGGAGGA
ACCTGACGAGCCAACGAAGCTGCGTGTGACGACAGTGCGGGAGATGTCCT
ACAAGATAGAGGACAACATCGACAAGTTCATGGTCCTCGTGGAGGAACAC
CAGTCCTCGTGTTCCGGGGCTCATGGCATCAGGAAGCTCATTGAGAAATG
CAACAGCTTGCTGCCAGACGTCAAGACCCGCCGCAAGATCGCCAAGGAGG
TGAAGGACATCAAGGACCAAATCAAGGAGGTCAGTGACAGATTTTTAAGG
TACGTACCTGCAGATCTTATTGTACTGTACTACCATCAAATTTGTGACTA
GTTAGCAGATGCTTGTATCTGATTTGTTGCTTGATCCACCACATTAACTG
AAGGTATAAGATAGATGAGTCCTCCTCTATGCCTGCAAAAGACAAGGTCG
ACCCTCGACTTTGTGAACTCTACAAAGATGCCACGGATCTTGTCGGAATC
GTTGGACCAAGAGATGAACTTGTCAAGTGGCTGAACGAGAAAGAGGGTGA
ATCACTTAGATTTGTCTCTGTTGTTGGATATGGAGGGTTGGGCAAGACGA
CACTTGCCAACCAGATCCGAGCGACCCTGCTTGGAACGACCTTTGAGTGT
GGGTCTTTTGTCTCCATTTCACGCAAGCCTGATATGAAGGCGATATTGAG
GTCTATATTGTCACAGATCACCAAGCAAGACACTGCTTACTCCGGATTAG
ATGATTTACAACTCATCATTGACAAGATTAGAGAAGTCCTCCAAGACAGA
AGGTACGTATGTACAAATTAACGTTGGTTAATTAGCATCTAAGCTTAGAC
TTTTTCTAATGATGTAAGATACAAATTCTGAGAGCATCTAAGCTCGTACC
TAGTGCCCTATATATGAGGAGTTGCTATATTTTGAGTTTCTTCCCCATTT
GTAGAGGTGTAGATGCTCTCAGAATTTCACTTACTGTACAAGTATGTTTT
AGATAATGAAAGCTATATTCATGTTAGAAATTTTCATCAAGGTTTATTAT
GCCTAGGATGCACATGGATGTGACACTGTTTTAGGATTTAGCGATACTTG
ATTGGTATCACTATAAATATCTAATGAGCTCCAATGTGTATCACTGTGTT
TCAGGTACTTTATCATAATTGATGATATATGGGAGTTAGGAACATGGAAA
ACTTTGAAATGTGCGTTTGTCAAGAATACATGTGGCAGCAGAATAATGAT
CACAACACGTATAGTTGATGTTGCCAAATCTTGTTCTCCTTCCAATGAAG
ATCTTGTCTATGAGATGAAACCACTCAATGAAGCCGACTCAAAGAAGTTG
TTTTTCAAGAGGATATTTGATTGTGAAGAAAGCTGCCCTGATAGCTTGAA
AGAAGCTTCCGAAGATATTTTGAAAAAATGTCATGGTCTACCTCTGGCCA
TCAATGCCATTTCTAGCTTGTTGGCCACAACAAGTGCAATAAGTGAAACA
AAAGAGGAGTGGGATCGGGTGCGACATTCAATTCGCTCTTCAAATGCCAA
AAGTAATATAATAGAGACCATGAATTACATATTATCTCTTAGTTATTTTG
ACCTTCCCCACCATTTGAGAAGCTGCATATTGTACTTGGCTCTGTTTCCT
GAAGACCGATTGATTGAAAGGGTGAGGTTGGTACGCAGATGGATTTCTGA
AGGCTTTATTCATGGAAAAAGTGGACAAGATCTCATGGAATTAGGAGAGG
AATATTTTCATGAGCTTGTGAACAGAAGTCTAATACAGCCCGAGTGGATA
GGGTATGACGGCAAGGCGAAGTATTGCCGTGTCCATGACACCATCCTTGA
TTTCCTCATTGCCAAGTCCTCTGAAGAGAAGTTGTGTACTGTTATGAAAA
AAGAGTGCAATCCTGGTAGCATTGTTCGTCGGATCTCTATTATGGGAACT
GAGGATGAAGACATTATAGAGCAATTGGATTTGTCACATGCTCGGTCAAT
CAGTGCTTTTGGGGATATCGAACGACTGCCATCGCTTGTGAAGTCAGAAT
CCCTGCGCGTGCTAGACTTGCAAAGCTGCAAAAAGTTGGAAAATCATCAT
ATCAAGGATATTGAAAAACTCTATCAGCTGAGATACTTGGATATCTCTTT
CACTGGAATCACGGAGCTTCCTAGGCAAATCGGGGAGCTACTATACCTAG
AGACACTAGATGTTACATTCTCTAACGTCCGTGAGCTTCCTGAAAGCACA
ACTCGGCTACGCCGACTTGCGCGTTTGTTTGTTGGCCCTAGGTGTAAGCT
TCCAGATGGGTTAGGAAACTTGGTAAACTTGCAAGATCTCCAGGAGATTG
ATGCCTTGCAGTTGAGGCACGTGGAAGAGCTTAGCAAACTAACAAATCTG
AGAAAGTTGAAGATTTGCTTGAAAACAAATGAGATAGAACGCAACACATT
AGTACAGTCCAAGGAAAAGCTGGTGTCCTCTCTCTGTAAACTTGACGAAT
GTGGCCTCCGTTCCCTGAGTATTTATTATCAGATGGGAGATAAGGATGGC
GAAGAGCCGTTCCTCCCTGCTTTGGGTTGCATCCGTGAGGTTATTGTATA
TAAAAGAGATATCTGCCAGATTAGCAGATGGCTCGCCTCACTTCCCAACC
TACACATGTTGAAATTCATCGAACCGAAGAAGATAGAACAGCAGGATATC
GATATGATTGGACTCATACCCAATCTGCTCGAATTGACACTTTTTTTAAA
TTCAACAGATGATGCACGGCAGCTCATCATCAGGTGCAAAGGATTTCAAC
AGTTGCAGCATTTTGTGGTTATCAATGCTCGTATGGGATTTTTAAAGTTT
GAACCAGGTGCTATGCCAAGGCTCAAGGAGCTTGAATACCATTACTTGAA
TACCATTACTGCGGTCGATTTGGACTTTGGCATCCAACACCTCTCCAGCC
TTGCTTGCCTCAAAGTCGTCCTATCCCGCCGTCGCTGGATGGCTGCAGAA
GTAAAGGCTGCGGAGGATGCTTTCAAGAGCATGGCCGAGGCACACCCAAA
CCGTCCAACACTGGAGGTACACTATTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.