GrainGenes Sequence Report: BE497251
Sequence
BE497251
Tracefile
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External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC366548
wEST map position
BE497251
NCBI UniGene
Ta.25835
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, weakly similar to NP_001046576.1 Os02g0286700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
Chinese Spring
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
2BS 2DS 4AL
Clone Library
Wheat heat-stressed seedling cDNA library
Tissue
Leaf
Developmental Stage
Two-week old seedling
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0766_A07_B14ZS Wheat heat-stressed seedling cDNA library Triticum aestivum cDNA clone WHE0766_A07_B14, mRNA sequence.
Other Name
WHE0766_A07_B14ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA015E1X
Clone
WHE0766_A07_B14
Probe
BE497251 WHE0766_A07_B14
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Two-week old seedling were heat treated at 37 C for 2 hr and cyclic heat treated at 37 C for 2 hr for two days at Texas Tech University (D. Zhang, H. Nguyen lab). The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
Ta.25835.1.A1_at 174 WHE2AFFY Ta.26105.1.A1_at 76 WHE2AFFY Ta.26105.1.A1_at 70 WHE2AFFY
DNA
acaaaaaagtaaactttttttttcttgtaaaatgaccacatgttttttga
gaaataatcagtaataattaaggaaaataaaatggcacggtactctttgc
cgcgcgctcactcgtcgctcaagaggtcgcccgccatgctccagcgctca
gacatacgtccatagtttggaatagcagccggcaggcttatcatgagccg
cttcatgtccgggaccgtgatcagttgatggctaggacagttaggatggg
cccagattgcgtgcatcagggcatcctccagcgcatcctccacttgctcg
gtgtcctctccccaacggatggctgcaacaagaacctcccgaagggaccg
caggttccccagacccaggtcaaaacaatcaccaccattaccagctgctg
gctcttttgcggcccgcagaccgatactgaacctcacttgtttagccttg
ggcagagctcctggttgaaacacgatatggcccagaaactcggtaaacag
ctcgaatgatgtcagacaacgaaacccatcatcaccgacaactagctgcc
tttggatttccggatcctccattcgcaagctgagacaacgaagagctggt
aaccttgc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BE497251
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