Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA049947

[Submit comment/correction]

Sequence	AA049947
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA049947
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGTCCACAATACCCGGATTTAGTCAGATCCAATTCGAGGGATTTTGTAG GTTCATTAATCAAGCCTTGGCAGAAGAACTTGACAAGTTTCCAACAATTA AAGACCCAGATCACGAAATTGCATTTCAATTATTTGCGAAAGGGTATCAA TTGCTAGAACCCTCGATAAAAGAAAGGGATGCTGTGTATGAATCACTCAC CTATTCTTCCGAATTATATGTATCCGCGAGATTAATTTTTGGTTTCGATG TGCAAAAGCAAACCATTTCTATTGGAAACATTCCTATAATGAATTCCTTA GGAACCTTTATTATAAATGGAATATACCGAATTGTGATCAATCAAATATT GCTAAGTCCTGGTATTTACTACCGTTCGGAATTAGACCATAAGGGAATTT CTATCTACACCGGAACTATAATATCAGATTGGGGAGGAAGATCGGAATTA GCAATTGATAAAAAAGAAAGGATATGGGCTCGCGTGAGTAGAAAACAAAA GATATCTATTCTAGTTCTATCATCAGCTATGGGTTCGAATCTAAGAGAAA TTCTAGATAATGTTTCCTACCCTGAAATTTTTTTGTCTTTCCCGAATGCT AAGGAGAAGAAGAGGATTGAGTCAAAAGAAAAAGCTATTTTGGAGTTTTA TCAACAATTTGCTTGCGTAGGTGGAGACCTGGTATTTTCGGAGTCCTTGT GTGAGGAATTACAAAAGAAATTTTTTCAACAAAAATGTGAATTAGGAAGG ATTGGTCGACGAAATATGAATCGGAGACTTAATCTTGATATACCTCAGAA CAATACATTTTTGTTACCACGAGATGTATTGGCCGCTACGGATCATTTGA TTGGAATGAAATTTGGAACGGGTATACTTGACGATGACGATATGAATCAC TTGAAAAATAAACGTATTCGTTCGGTTGCGGATCTGTTACAAGATCAATT CGGACTGGCTCTTGGTCGTTTACAACATGCAGTTCAAAAAACTATTCGTA GAGTATTCATACGTCAATCGAAACCGACCCCCCAAACTTTGGTAACTCCA ACTTCAACTTCGATTTTATTAATAACTACTTATGAGACCTTTTTTGGTAC ATATCCGTTATCTCAAGTTTTTGATCAAACGAATCCATTGACACAAACTG TTCATGGGCGAAAAGTGAGTTGTTTAGGTCCTGGAGGGTTGACTGGGAGA ACTGCAAGTTTTCGGAGCCGAGATATTCATCCGAGTCACTATGGGCGTAT TTGTCCAATTGACACGTCCGAAGGAATCAATGTTGGACTTACTGGATCCT TAGCAATTCATGCGAGAATTGATCACTTGTGGGGATCCATAGAGAGTCCG TTTTATGAAATATCTGCTGAGAAAGAAAAAAAAAAAAAGCGAGAGAGGTG GTTTATCTCTCACCAAATAGAGATGAGTATTATATGATAGCAGCAGGAAA TTCTTTGTCCTTAAATCAAGGTATTCAAGAGGAGCAGGTTGTTCCAGCTA GATACCGCCAAGAATTCCTGACTATTGCATGGGAACAGATTCATGTTAGA AGTATTTTTCCTTTCCAATATTTTTCTATTGGAGGTTCTCTCATTCCTTT TATTGAGCACAATGATGCGAATCGGGCTTTAATGAGTTCTAATATGCAGC GCCAAGCAGTTCCCCTTTCTCGGTCCGAAAAGTGCATTGTTGGAACTGGA TTGGAACGCCAAACAGCTCTAGATTCGAGGGTTTCCGTTATAGCCGAACG CGAGGGAAAGATCGTTTCTACTGATAGTCATAAGATCCTTTTATCAAGTC TATAAGACTATAAGATTATAAGTATTCCGTGTAAACCAAAAACCCCGGTT CGAACAAAAATACTTTTGCAGGGAAATCCATTGGGGGGAACTTGTTTTAA AAACTGCTTTATTTGCCATGGGAATGCTACACTTAGGGGGGGATATTGCT TTTGGTTGAACATTATTTAACACCAATATAAATTGAACGTTTGGTAATGA ATTTGCTCTTTTCACATCCGGAAATATCTAAATTCAGACGGATACGACAA GCCAATCTGATAAAAAATCACTAAAGAAATACCACATCTAGAATAACATT TACTGAATTTACAGAAATGGAGTTGTTAGGTTGATCCAGGTTGGGATCCT GGGTAGTAACTAAATTAACGCCTCAGATGAAATCATAACGTATATAGCGG AAGCTCGTTATCGCGGATCTTTGGCCTTGAGGTATCCACTTCAAAAGAAA CTTCTCTCAAATTACCTATAGGTGGAAGAGGGCGCGTTATCGATGTGAAA TGGATCCAGAGGGACCCCCTCGACATAACGGTTCGTGTATATATTTTACA GAAACGTGAAATCAAAGTTGGGGATAAAGTAGCCGGAAGACATGGGAATA AGGGGATCATTTCCAAAATTTTGCCTAGGCAAGATATGCCCTATTTGCAA GATGGAACACCTGTTGATATGGTCTTCAATCCCTTAGGAGTACCCTCCCG AATGAATGTGGGACAAATATTTGAAAGCTCGCTCGGATTAGCGGGGGATC TGCTAAAGAAACATTATAGAATAGCACCCTTTGATGAGAGATATGAGCAA GAGGCTTCAAGAAAACTTGTGTTTTCAGAATTATATGAAGCCAGTAAAGA AACAAAAAATCCATGGGTATTTGAACCCGAGTACCCGGGAAAAAGCAGAA TATTTGATGGAAGAACAGGAGACCCCTTCGAACAACCTGTTCTAATAGGG AAGTCCTATATCTTAAAATTAATTCATCAAGTTGATGAGAAAATTCATGG GCGTTCTACTGGGCCCTACTCACTTGTTACACAACAACCCGTTAGAGGAA GAGCCAAGCAAGGGGGACAACGAGTAGGAGAAATGGAAGTTTGGGCTTTA GAAGGATTTGGTGTTGCTCATATTTTACAAGAGATACTTACTTATAAATC CGACCATCTTATAGCTCGCCAAGAAATACTTAATGCTACGATCTGGGGAA AACGAATACCTAATCACGAGGATCCTCCAGAATCTTTTCGAGTGCTCGTT CGAGAACTACGATCTTTGGCTCTAGAACTGAATCATTTCCTTGTATCTGA GAAGAACTTCCAGGTTAATAGGGAGGAAGTTTGATTTGATCGGAATAAAT ATAAATTCTTTTCTTATTTCTATTTTATGATTGACCAATATAAACATCAA CAACTTCAAATTGGACTCGTTTCCCCTCAACAAATAAAGGCTTGGGCTAA CAAAAACCTACCTAATGGAGAAGTCGTTGGCGAAGTCACAAGGCCCTCTA CTTTTCATTATAAAACCGATAAACCAGAAAAAGATGGATTGTTTTGCGAA AGAATCTTTGGACCCATAAAAAGCGGAATTTGCGCTTGTGGCAATTCTCG AGCGAGCGGAGCTGAAAACGAAGACGAGAGATTTTGCCAAAAATGCGGGG TGGAATTTGTGGATTCTCGGATACGAAGATATCAAATGGGATACATCAAA CTCGCATGTCCCGTGACTCATGTGTGGTATTTGAAAGGTCTTCCTAGTTA TATCGCGAATCTTTTAGATAAACCTCTTAAGAAGTTGGAGGGCCTAGTAT ACGGCGATTTCTCTTTTGCTAGGCCCAGCACTAAAAAACCTACTTTTTTA CGATTACGAGGTTTATTCGAAGAGGAAATTTCATCCTGTAACCACAGCAT TTCTCCCTTTTTTTCTACCCCAGGCTTTGAACATTTCGAAATCGGGAAAT TGCGACAGGAGCAGGTGCTATTAGAGAACAATTAGCAGATTTGGATTTGC GAATTATTATAGAGAATTCCTTGGTCGAATGGAAGGAATTAGAAGACGAG GGGTATAGTGGAGATGAATGGGAAGATAGAAAAAGACGAATAAGAAAAGT TTTTTTGATTAGACGCATGCAATTGGCAAAACATTTTATTCAAACAAATG TGGAACCAGAATGGATGGTTTTGTGCTTATTACCCGTTCTTCCTCCCGAA TTGAGACCCATTGTTTATAGGTCTGGAGATAAAGTAGTGACTTCGGACAT TAATGAACTTTATAAGAGAGTTATCCGTCGGAACAACAACCTTGCCTATC TATTAAAAAGAAGTGAATTAGCGCCTGCAGATTTAGTAATGTGTCAGGAA AAATTGGTACAAGAAGCCGTGGATACACTTCTTGATAGCGGGTCCCGCGG GCAACCGATAAGGGATGGTCACAATAAAGTATACAAATCACTTTCAGATG TAATTGAAGGTAAAGAGGGAAGGTTTCGTGAGACTCTGCTTGAAACGGGT CGATTACTCGGGGCGTTCTGTCATTGTTGTGGGTCCTTCGCTTTCATTAC ATCAATGTGGATACCTACTAGAGATAGCAATAAAGCTTTTTGCTATAGAA TTCGCATTAAATCACGAAAGCGCTACTTCTAATGTCAGGATTGCTAAAAG GAAAATTTGGGAAAAGGAACCCATTGTATGGGAAATACTTCAAGAAGTTA TTGGACATCCTGTACTGTTAAATAGAGCACCTACCCTGCATAGATTAGGC ATACAGGCCTTTCAACCCACTTTAGTAGAGGGGCGTACTATTTCTTTACA CCCATTAGTGTGTAAGGGTTTCAATGCGGACTTTGATGGGGATCAAATGG CTGTTCATCTACCTTTATCCTTGGAAGCTCAGGCGGAAGCCCGTTTACTT ATGTTTTCTCATATGAATCTCTTATCTCCCGCTATTGGAGATCCTATTTG CGTACCAACCCAAGACATGCTTATCGGGCTTTATGTATTAACGATTGGAA ACCGCCGAGGTATTTGTGCAAATAGATATAATAGTTGCGAAAACTATCCA AATAAAAAAGTCAATTACAATAATAATAATTCTAAGTATACGAAAGATAA AGAACCCCACTTTTCTAGTTCTTATGATGCACTGGGAGCTTATAGACAGA AACTAATCAGTTTAGACAGTCCCTTGTGGCTACGATGGAAACTGGATCAA CGCGTCGTTGGGTCAAGAGAAGTTCCAATTGAAGTTCAATATGAATCTTT GGGGACTTATCATGAGATTTATGCCCACTATCTAATAGTGGGAAATAGAA AAAAAGAAATTCGTTCTATATACATTCGAACCACTCTTGGTCATATTTCT TTTTATAGAGAAATAGAGGAAGCCATACAAGGATTTAGTCAGGCCTATTC ATACATTATCTAAACAAGGAAGTTAGATTCGGCGATGCCCCTCCCTTTTG GGGGGCATTCCGATTTCCGTAGTATCATCATTTTTGCCACGCGAATGCAG ATTGAGATTAAGTAAATGAAGTTAATTAAATTTTCGAATCACTGACTCAG GCCCATTGTCGAATCCTACTCAGCAATTGAGAATCCTACTATCTAAGGGG GGGTATGGATGGCGGAAAAACAGAGTTTCATAAGGAACTAGTAGACGACT ATTGCGACTTATAGCGGATTAAAAATTTATCAATCCATATACTATCAACT AAAGACTCTGGGCTTCCATCAAGCCACTACTACATCGATTTCGTTAGGAA TCGAGGATCTTTTAACAATACCCTCTAAGGGATGGTTAGTCCAAGACGCG GAGCAACAAAGTTTTCTTTTGGAGAAACACTATTATTATGGGGCTATACA CGCGGTAGAAAAATTACGCCAATCCGTTGAGATATGGTATGCGACAAGTG AATATTTGAAACAAGAAATGAATTCGAATTTTCGGATAACGGATCCTTCT AATCCAGTCTATCTAATGTCTTTTTCAGGAGCCAGAGGAAACGCATCTCA GGTACACCAATTAGTAGGTATGAGAGGATTAATGGCAGACCCTCAAGGAC AAATGATCGATTTACCTATTCAAAGCAATTTACGCGAGGGGCTTTCTTTG ACAGAATATATAATTTCCTGCTATGGAGCCCGCAAAGGGGTTGTAGATAC TGCTGTACGAACAGCAGATGCTGGATATCTTACACGTAGACTTGTTGAAG TAGTTCAACATATTCTTGTGCGTAGAAGAGATTGTGGTACTATCCGAGGT ATTTCTGTTAGTCCTCAAAATGGGATGACGGAAAAACTTTTTGCCCAAAC ACTAATTGGTCGTGTATTAGCAGACGATATATATATCGGTTCACGATGCA TTGCATCGAAATCAAATATCGGAATTATGTGAATTTCATAACTGGGAATC GAGCATAACTTTTTCGAGCATTAAATATCGAGATTGCCGAAGCACTTCTT GGATCTTCGAATTCTGTTATGGCCGGAGTCCTACTCATAGCGATCTCGAA GTAAAGCCGTAAGCCTGCGGGTATCAATTAGAGCCCGGGACTCAATAACA TTAAGAACTTTTCATACTGGCGGAGTATTCACAGGGGGTACTGCCGACCT TGTACGATCCCCTTCGAATGGAAAAATCCAATTCACTGAAAAGTCACCCC ACACGTACCCGCCATGGACAGCCTGCTTTTCTATGTTAATAGACTTGCAT GTAACTATTCAGAGTCATTCTATATAGTGTGAGTATTCCCTGGAAAAGCT TGATTTAGTGCAAAATATCAATATGTAAAATCGAACAAGTAATTGCGGAG ATTCGTGCCGGAACGTCCACTTTACATTTTAAAGAAAGGGTACAAAAGCA TATTTATTCCGAATCAGACGGCGAAATGCACTGGAGTACTGATGTTTACC ATGCGCCGAATATCAATATGGTAATTTCGTCGATTGCCAAAAACAAGCCA TTTATGATTGTCAGTAAGTAATGCAGATCCAGTATATGTCCACTCCACAA GGATCAAGATCAAATGAATACTTATGGGAAAAAGTAGGTTATTAATCAAG GTTCACGAAGAACTTACAATTTTCCAACAATTTGAAGATCCCAGATCAAG AAATTGGAAAAAAAAGCGAAGAAAAGGTTCGTCATCCATTACAATACCAT CAAGAACAAGAGAAAGAGATCCTGTTTGGGTATTTCTGTCCTAATCCCGA ATTATATGTTTTACGTAGAAATACTATTTTTGCTTATTTTGACGATCCAC AATACAGAAAAAATAAAAATTGGAAATTCCTAAACGAATTCCTTAGGAAC CTTTAAGACGAAATGGAATATAGCGAATATGAGAGGAAGACGAATATCTA GAAGTATGGATATTAAACCGTTGGGAATTAGACCATAAGGGAATTTAGAT ATAGACCAGGAACGAATATAGATTGGGGAGGAAGATCGAATTAGGAATTG AGAAAAAAGAAGAGAATATGGGCTCCGAGAGCAGAAAACAAAAGAATATC TAGAGAGAGGAGGATCAGCTATGGGACGAACTAGAGAAAGTCTAGAGAAT GTTTCCTAGAGGAAATTTTTTTGTTTTATTGAGCATCGAGAAGAAAGGAT TTAGTCTAAAAACCAAAAAGATTTTGGAGTTTTTTCAAGAATTTCTTGCG TAGGTGGAGACCTGGTATTTTCGGAGTATTGTTGAGGAATTACAAAAGAA AAAATCAACAAAAAGTGAATTAGGAAGGATTGGTCGACGAAAAATGAAAA GGAGACTAATCTTGATATCCTCAGAGACAATACATTTTTGTGAACACAGA TGTATTGGCCGCTACGGATCATTTGATTGGAATGAAATTTGGAACGGGTA TACTTGACGATGACGATATGAATCACTTGAAAAATAAACGTATTCGTTCG GTTGCGGATCTGTTACAAGATCAATTCGGACTGGCTCTTGGTCGTTTACA ACATGCAGTTCAAAAAACTATTCGTAGAGTATTCATACGTCAATCGAAAC CGACCCCCCAAACTTTGGTAACTCCAACTTCAACTTCGATTTTATTAATA ACTACTTATGAGACCTTTTTTGGTACATATCCGTTATCTCAAGTTTTTGA TCAAACGAATCCATTGACACAAACTGTTCATGGGCGAAAAGTGAGTTGTT TAGGTCCTGGAGGGTTGACTGGGAGAACTGCAAGTTTTCGGAGCCGAGAT ATTCATCCGAGTCACTATGGGCGTATTTGTCCAATTGACACGTCCGAAGG AATCAATGTTGGACTTACTGGATCCTTAGCAATTCATGCGAGAATTGATC ACTTGTGGGGATCCATAGAGAGTCCGTTTTATGAAATATCTGCTGAGAAA GAAAAAAAAAAAAAAAGCGAGAGAGGTGGTTTATCTCTCACCAAATAGAG ATGAGTATTATATGATAGCAGCAGGAAATTCTTTGTCCTTAAATCAAGGT ATTCAAGAGGAGCAGGTTGTTCCAGCTAGATACCGCCAAGAATTCCTGAC TATTGCATGGGAACAGATTCATGTTAGAAGTATTTTTCCTTTCCAATATT TTTCTATTGGAGGTTCTCTCATTCCTTTTATTGAGCACAATGATGCGAAT CGGGCTTTAATGAGTTCTAATATGCAGCGCCAAGCAGTTCCCCTTTCTCG GTCCGAAAAGTGCATTGTTGGAACTGGATTGGAACGCCAAACAGCTCTAG ATTCGAGGGTTTCCGTTATAGCCGAACGCGAGGGAAAGATCGTTTCTACT GATAGTCATAAGATCCTTTTATCAAGTCGTGGGAAGACTATAAGTATTCC TTTAGTTAACCACCGTCGCTCGAACAAAAATACTTGTATGCACCAAAAAC CCCGGTTCCCCAGGGTAAATCCATTAAAAAGGGACAAATTTTAGCAGAGG GAGCTGCTACAGTTGGGGGGGAACTTGCTTTAGGAAAAAACGTATTAGTA GCTTATATGCCATGGGAAGGTTACAATTTTGAAGACGCAGTACTAATTTG CGAACGTTTGGTATATGAGGATATTTATACCTCTTTTCACATCCGGAAAT ATGAAATTCAGACGGATACGACAAGCCAAGGCTCTGCTGAAAAAATCACT AAAGAAATACCACATCTAGAAGAACATTTACTCCGCAATTTGGACAGAAA TGGAGTTGTTAGGTTGGGATCCTGGGTAGAAACTGGTGATATTTTAGTAG GTAAATTAACGCCTCAGATAGCGAGTGAATCATCGTATATCGCGGAAGCT GGATTATTACGGGCCATCTTTGGCCTTGAGGTATCCACTTCAAAAGAAAC TTCTCTCAAATTACCTATAGGTGGAAGAGGGCGCGTTATCGATGTGAAAT GGATCCAGAGGGACCCCCTCGACATAACGGTTCGTGTATATATTTTACAG AAACGTGAAATCAAAGTTGGGGATAAAGTAGCCGAAGACATGGGAATAAG GGGATCATTTCCAAAATTTTGCCTAGGCAAGATATGCCCTATTTGCAAGA TGGAACACCTGTTGATATGGTCTTCAATCCCTTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.