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GrainGenes Sequence Report: AA000221

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Sequence
AA000221
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA000221
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GGTATCCGTACATCGCGTCAACGCCGCCATCTTCTTAACTACCTAACCGG
CCGGCCTTTGTCACCAAGCTCGAGCAACAAGCATCCGTTCGGCGCCGCGA
CGACCCTGCCGATCGACATGCCGCCGTCTCAGCTTCTGCTGCTGGCCCTG
GCCTCCGCCCTGCTGCTCCTGTGGCGGCCGGCGGGCGCCGCCGAGCACGC
GGTGGGGGGCGACGGCATCAACGGCTGGGACACCGGCACCAACTACGCCA
CCTGGTCGCAGGCCCAGTCCTTCGCCGCCGGCGACGTCCTAGGTCAGTAC
GTACATACATATATCTCCATCAACACAACGTCCTAGCTAGATAGACAGTA
AACTGGTTGTAAGATTTGACCGATCCGTCTGCGTTGACAGTGTTCGAGTA
CGTGAAGAGCCAGCACAACGTGTACGAGGTGACGGAGGCGGCGTACCGGT
CCTGCGACGCCACGGCGCCCGCCGACGTGCTCGCCACCTACGACAGCGGC
TTCGACAGGGTGGTGCTCCCGGAGGCCAACAGGACCTACTGGTTCATCTG
CCAGGTGCCCAACCACTGCATCGGGGGCATGAAGCTCGCCGTCAACGTCC
CAGGAGACTCCACTGCCGCCGTGCCGCCGCCGCCGTCTCCGTCGGCCGCG
GCGGCGTCGCGGACGGCGTCGTCGGGCGGGTTGCTGCTGCTCGTGCTCGC
CGTGGCGCACCTCCTGCTGGTCAACCGGGCTGGGTAGCAAGTTGACGTGT
TCAGAGTTTTGGGCTTGCTGGCTCCTACACGCTAGCTGTGTAATTTTATT
CGTTGTATTGTGTACATTTCATTTTTTTTTTTGCAATTAAGATTTTGATG
AATCAGTCATTCACGATTCATGGACAATTCAGGTGAACCCACGAAATTTG
TGTAGAATCTGCAGGCAGGCCCATTTGAATTGCCTCGTATATAGCTTGTT
CTTTGTCTGGCAATTCTTCCAATTTACTTCATATATACGTTCAAGATTCA
ACAACTCAATATCCAGGCTAATTTTTTTTAAATAATACATTTTTTTATTC
ATTTTCACAAATAATACGCAAAACTGGAAATTTTAAAATCTGTCCGTCCG
TCGTCCGTCCAACGGACGAAACAACGCCCTCGTCTGTTCACGAGACGACC
AACATGTCGTCTTTTGTTGCAAAGACGACCAGGTTGTCTTCTTTTCTTCA
AAAGACGACCAGCTTGTCGGCTGCCAGGGGTCGGCCCCGTCGTCGGTTGA
ACGGACGACGCGCGCTGTCGGGTGACAGGGGGTCAGCCGCGTCGGCTGTT
GAAGGGACGACGCCGCGGTTCGTCCGTTGAAGGGACGACGCTCCCCAGCT
ATATTAACTCGTCTGCGCCCGTCGTCTGCTTCCAGCTACTTGCTCCTTCC
CAGCTCCTCTCGGCTGTTCTTTCCTCTCTCGCTTGCTCTCATTTTCTCAG
CCGTTGCACCGATTTGTAGCCTAGATTTCTATCCAAACTCGCTGCTCTAA
CACATTAGCAAGCTAGTAGAGTCCCGATCTACTAATGGGATAGCCTGGTG
TAGTGATTTGAGGCGTTTTGGTGGAGGGATCTGGTGATGTTCTTGTTAAG
CAATGGCCATGGTGGAGGCTGGTGCTGGGACTTGAGGAAGGTGAATGGTG
GAGGTGCTGATCCATTGACCTAAGGCAGCTGCACGGCAGGACTTCGCACG
CTTCAAGGGTAAATCCTAAGTTCTTGCTTATTGCAGTCATGTGTGTATGT
TCATAGGTAGCGTTTGATGGGGTCTGTTAGATGCAAGATATTTGTAGAGT
ATTATGTGTCAATGTACCTGTTTTTGACTATTTTTGGTATTTTTTAGGTC
GAAAATCATGTCAAATAATATAGTGTTTAGGTTCTTGTATGGTCATGGTT
CCGTCAGAATGAACCAGCACGGAGTTGATTTGAGCGAGTTTAGATTTATG
GATGAAGTGCTTCAGAATCCTGAAACAGTGCCCGTTACTCAGTTGAAGGA
TTGGTTATGTGTTCGTTTAGGGCTCCCTCCTACCCATACTGTCGGTGTGC
TTGCTTTATGGACTAAGTCAAGGCAAACTCCTAATTTTTATTTAAGGCCA
ATAGAAGCGCAACAGAAATGGGTCAAATTTGTGCAAGCTTGCCAGAAAAG
AGAAGTTAACCCCAGTCTCTTAGTGTTACCTGTGGTGAAAGAGGCTGGGT
ATGATCATGACCATAGTAGTCAGACCGGTCATGCTGGAGGTAGTTATGAT
CATGGCCAGAGTAGTCAGACCGGTCATGCTGGAGGTAGTTATGATCATGG
CCAGAGTAGTCGGACCGGTTATGCTAGAGGTAGTTATGATCATAGGAGTA
GTCAGGGACAAGAGGGTGGCGGCGGATATGAATCAGGTCATAGTAGCTAT
GCACACACCGGGGGTGATGGTTATGTATCAGAGGACGGTGGTGAAGGATT
AGGGGAAGACATATTCAGTGGCGAAGCTGATGAGGACGAGATATATGATG
GTTTGTTGCAACATCAAATGGAAGCCGAAGACTTAGAAGGCAACAGTGAT
ACGGCTGATGATTCTGGCGAGTCTGATCAAGAAGAGATCGGCCAACCTAT
TCCGGCATCATGGAATAATGACAACACAGCAGCAATGACTGTGAACGATG
GGCATGATTCGGCGTGGCATTATCACGCGAACAACATCTCTCTGGGTGCA
TTATATCCTAGCAAGAGACATCTGCAGGAAGCAATTGTTGAGTGGTCAAT
GTCCATGCAACGGGTCATGAAAACGAAGGTTTCATCACAACAATATTTGA
CATTGGTTTGCGAGGAAGCTGGATGTCCTGCAAGGGTGCATGCCCATGTC
CCTAGGTATGACACAAACTGGAAGGTCACCGATGTTGTGATGCACACATG
CACACTTGAAAGTGTCCTTCAGGACCATCGTAACCTCACGTCAACCCTCC
TGGCTAGACTGTTGTACATAGAGATAGTGGAGGACAAAGCCATGGGGGTG
AATGCTATCATTCACAAAGTTTCTGTCAGATTCCGCTACAATATTTCATA
TGGGAAGGCTTGGAGGACTAAGCAAAGGGCACTGGAGGCAAGGTTTGGTT
CGTTTCGAGACGGGTATGACTGTGTTGTTAGGATGGTCCAGACACTGCAG
GCTAGGAATCCAGGCACCTACGTGGACATCCAACACTTTATATTGCCACA
CGAACCTAATTTGAGGGTACTTCATCGAGTGTTCTTCTCATTTGCTATAT
GCATAGAAGCTTTCACTCACTGTCGACCAGTCATCTGTGTGGATGGTACA
TTTCTCACTGGCAAGTATAGGGGTCAGATATTGACTGCCATAGGCCAAGA
TGGAAACAATCAAGTGGTTCCACTTGCTTTTGCTTTCGTGGAGAGCGAGA
ACACAGAGAGTTGGGTATGGTTTTTCAGGCAGCTGAAGATAGCAATTGTG
AGAGATACACCGAATGTATGCGTGCTTCATGATAGGCATCCAGGTATACT
AAGCGCGATAAAGAAGCTCACACAGCCCACTCCTGATGAAGTAACTCCAT
GGCTGGACATGCAGAGTCGTTGGTGCATGCGGCATCTAGGGGCCAATTTT
TTCTCACAGTTCAGGAACAAGGCTCTTATGAACCTATTCAAGAAGCTTTG
CAAGCAGAACCAAGAGTGGAAGTATATCAAGTGTCGTGGCTATCTTGATG
ACTTCACTAAAAAACATGTGACTCAGAGGAGAGCAGCTAGAGCAGTAGCG
GTCGCGGCTCATGCAACGGCGTTAGCTGCACAGGCAACAACAGGAGCAGC
ACCATAGGAGGAAGAACCCATTGCCCTTTGTGACTTGCCAGGATTTGACC
AACCCGGTACTAGGAGAAGGCCTGGCAGAAGGATTAAAAAATTTCAGGAA
TGGATACAACACGAGCCTGTAGAGAGGTGGTCTCTGCTGCATGACACTCA
TGGTGCTAGGTTTGGCGTCATGACTACAAATCTGGCTGAAACTTACAACT
TTGTCTTGAGAGGAAGTAGGGCTCTACCATTAACAGCAATTGTGGAGTGT
ATTTTCACCGAAACTCTGAAGTATTTCAGAGACAGACTCCAGATGGCTCA
GATGCATATCATGAACAACCCAAACACGAGGTATTGTTCAAAGATCATGC
ATTACATGGATGCCAAGATGGAGAAGGCTCGGTCCATGCATGTCATCGCC
ATCGGTAATCAGGAAAGAAGGTTCGAGGTACGCCTCCCTTCCAACCGGAT
TGGAACAGGAGATGAGGTAAAGACACAGGAGGTGAGGATAGGCAACGAAG
CCTGGCCAACGTGTGAGTGCACGTGCAATAAACCCAAGCTGTTGCATCTG
CCTTGCTCTCATGTACTAGCTGCATGCGGGCTGATGGGTATGGATGCGAT
CTCGTTTGTGTCTCCTTATTTCCTTAAGGACGCGGTGGTCAATACGTGGA
CATGCGAGATGATGGGATATAGGGCATGGGAAAATTTTAATAAAGTAAAT
CCAGGTGAAAGGGTTTACATCCCAGATCATGTACTGATGAGGACAGGAAG
AGGAAGGCGACAATGTGTCCGCATCCGTAATGATATGGATGAATCTGAAG
CCGGAGGCCCTACTAGGCAATGTTTTCTGTGTAATCAATTTGGTCATATA
GACACCAGTTGCCACATCTTCAGGAATGGTGGAGCTGCTCCTCGTGGACG
TGGCAGCCGAGGAAGAAGAGGCAGAGGAAGAAGAGGCAGAGGAAGAAACT
AGATGTGTGAAACTATGTCTTAAATTTGTAATATATGTGGAACTATGTCT
TAAACTCATATGGAGGAGATAGAAGGGCGACTACTTGGGTTCCAGACTAG
TCGCTTACAGTACGACTCGTCTTTACTCACGTGCTTGGTGGATCGATGGA
GGCCCGAGACTCACACTTTCCATTTTCGATGGGGAGAGATGGCTCCTACC
CTTCAGAACGTCTCGTACTTGCTGGGACTTCCGTTGGCTGGCGTGCCCAT
AGGCCCAGTGGATCCACCGGAAAATTGGGCCAAGAGATGGCCCAACGATT
CTTTGGCATCCGCGATGGAGCTCTGGCCTTTGGCCATGACAATCATGGGC
AAAAATTTGGATGGTTGGAGCAGTATCAGATGTGTTTCATTTATTTGTTC
TATTTTGTTGGAGAAGTATCATGTACTGAAAATTGTTCTATTTGCCAATG
CAGATACAGAGGTTTGGGTTCCCGGCCACTCCGATGACTGCCCCACAGAT
TACACGCAGCCTGGAGGCATACCTTATCTGGCTGCTCAGGAAGGTGATGT
TCACTGAGAACCACGTGTCGACCATTAGTGCGCGATACATCCATTTTGCT
AGAGGGATCGCGGAGGCGACGTGCCAGGAAGAATGCACACAGTGGAGTTG
GGGTTCAGCTGTCTTATCAGCTACGTACCGAGGTATGTGCAATGCTTGCC
AGTTAACCAAGGACAGTTCTGCCTTGCTAGGATACCCATTGTTGCTGCAA
CTGTGGTCATGGGAGAGGTTCCCTATCGGCCGTTCAGATGTAAGTGTCAA
CCAAATAGTCGGCAACCAGGAACATGAAACAATTGTCTACCAATCTGACC
TGCTGTTCGACGAAGAGCAAATTGATTTGCCTACATTTGGCACTCACTGG
ACCCGTCGCAAGGTCAGTGTAATGTCTTAATAAATTGCACTTCTGGTACT
ACAATATGAAAGTTACTAACAACTATTTTGTCATGCAGTGTCGTTTCGCG
GGAGAGCAAGTCGTTATATGTTATCCATCGTTCAGCGAGCAGTTCGACAC
ACTGAAAGTGGATGTCGTGATTTGGGAGCCGTACACCCTGCAGACACGAC
ACGCACGATATCCTGGAGGCATATCTATTATGTGCACTAGAGATCGAGAG
TACTGGCTGACTACATCCAAGATCATCTTTGATTGCCAAGTTGAGGAGAT
GTCTCAACAGAGGGTCATGCGACAGTTTGGTCTTTGCCAGATGGTAGATC
CCCCGCGTCCGGATGTTCCCCTTCCAGATGTCGTGCACGCGTAAGTAAAT
ATATGTATATAAGGAATGCATCTTATACTTCATCTATGTTCTTTAATGAT
GGTCTAACAAATTCTAATGACATGTACTCTCGGAGAAGTAGCAAGACTGC
CACTCAATGGCTCCAACGGGTGGGGATTTACGTCAACGAGTGGCAGAATG
CACCAACACAAGTGTGGCACCCTGGCCCGTTTGATATGGAGCTATTTCAC
GGATACCTACAGAGGTACATGTCGATGACACGGCTACGTCCCATTCCACA
CGCACATGACGATGAGATATACCCTAGCCAGTCAACACTAGAGTCCAGAC
AGTCAGCGGTAAGTACTTTATTTAGAGCACAATAAACATGAGTGCCTATG
TAGTGCATACCTAACTATGAGAAAAATGCAGGCCGACATGACGTGGGAGC
TAAAGACTGAGGTGGCTCAGTACGGACGATCGCTTTCGTCCGTTCCTCTT
GTGCCCCGTCAGCAGGCTCAGTCCTTTGCCCGGCGGGTCGAGGAGAAGCT
GCGGCGTATCTACGCGGCCATCACGTGCACCAGCGTCTCAGACGTCGTTC
AACACCGAGAAGCACAACGCCCACCGCGTCACTCGGTGGAGGAGCGCGCC
CCACGTCGATCCACACAGCAGCGCCCACCGCGTCACTCGGTGGAGGAGCG
CGCCCCACGTCGATCCATGGAGCAGCCACCTTCTCCAGACCATGTTGGAG
GATCGGGACGGCACGAGGAGCATATTTCTCCACCACTCCGCCACGGGCCT
CGTCCACGACTCTCACAGCAGGCGCCGCCGAGAGCACCACCTCCAGACCA
GGCTGGAGGCTCGGGGTGGCAGCAATCACAGTTTACTTTCGACCAGTTGC
AGCAGAACCAGATTACTTTCGAACAATGGCAGCATCAGCAGCCGATCCCC
TACATGGACTTTGCTTATCGACCACAATCTCATCCTCAGGGTAAGCGTGT
CCCTTCCTACTATTATTAGATGCAGTATGTCATTGTTCAGTACTTAATTT
CTTGTACACTAGCAGGAGACTCCGTTACATGGGACAGTACTGACGACCGT
CATCAGCAGACACAGCACGAGCAGGTAGACTGGTTTAGTCAGTATCAGCA
AGGTACTCCACCACCTATCTCCACACAGAATACACAGGATCAAGGTGAAG
GGTCAACTGCACCTCGCCGTGATGTGATTCCACCCCACAGATATGGATGG
AGTACACCGAGGCCTCCGCCACCTCGTCGTCGACACCAATGATATCTACT
TATGTATCGGTCATTTACCTATCTATGTATGAGACATCGTTCTATTATTT
CATGATTTTATTCGACAAACTACTCAACATAACTTGCAACATAGTTCAAC
ATAACTTGCGGTACATAAATAAGAGTCCTATCTATCCCTAGCATGATGCC
TTTCCCTTTCCCTTCGATGATGCCTCGTCCTTTCCCTTGGACGATCCCTC
GCACTTGCTCTTCTTGGCCTGCGATTTCTTCTTCTCCTGCCTCTTGTCCC
ACTCAGCTCTTGCCTTGCTTCCAACGGGTGGCGGCATGAAGATATCATCC
TCATCTTCGCTCTCTTCTATCCAGGCCCTACGTGCCACAACCTGCTCCGT
CATGTCATCTTGACTCTTCTTGGCCTGCTCTTTCTTCTTCTCCTGTCTCT
TGTCCCACTCAGCTCTTGCCTTGCTTCCAACCGGTGGCGGCATGAAGATA
TCATCATCATCTTCGCTTTCTTCTATCCAGGACCAAGGTGTATTAGCCAC
CTCCATCATGCGAGCTTCACTCTTGAAGGTGAGCTTGTCCCACCTTGCCT
TGATCCTGAGAAGCTCTGCTCGTACCTGATTTGGGGTCTTCAGTTTTCAC
CCTCTTAGATAAAGTGACTTACCAAGTGTAATGAGAGCATCATGGTTCGA
TACCAACGTATCCCAGTCGGCTGGTTTATGGCCTATCTCAACAGTTCTGG
ATATGAAGAAAAGCCCAATGGACATATCTATAGGCCAGGGAGACGCGTCG
GTCATAGTGGAGAGGAGTGGAGGAAAATGCGAGAGCAAAAGGAGAGAGGG
AAATGAGAGAGTAAGAGGAGGAAGAGATGAACTGGATTAAAGGATACATC
CCGTTGCCCGGATTTATAGAGGCACCGAACCGAATAGGCGGGAAAAAAGG
GCGGGAAGTCGTGGCGGGAAAAAGAGGGCGGGAAGTCGTGGCGGGAATAA
AGGGCGGGGATTACTGGCGTGAAAATTTTGCCGGGAGTAACGGCGGGAAA
AAATGGCGGGGAGTACCGGCGGGAAAAAACGGCGCGAAGGATTGCCGAGC
GGACGATTATTTAGCGAAGATTATGTAGCGGCGGGAGCACTGGGGCGTCG
GCTTGTCAAAGGACGACATGTCCTGTCGTCTGTTCAAGGGACGAAACCCT
GTGTCGTCCGCGCAACCAACGACGCACACTGTCGTCCGTTCAACAGCGCC
TCCACCTCCGCGTAGCTGAGAGTGAGTTGAGGAAAGGCCATGGTGTGAGA
GTGAGCATAGATCTGCAATGGCGATGGCCGTCGCGTCTACATATAACAGG
AAAAGGGCAGGAAGACTAGGCAGAAAGTGATGCAAAAGACGGGAAGCACA
TAAAAGGAGAACTTGGTGGCAAGCAATTTCGTCGCCGTGTGATCATCGAC
GGGATGCGATGCCACTCGAGAGACGAATCGTCTATCTCACTCACAGGACT
GGTCCGCATCTCCTTCTCGTCCATCCGGCGTCCTGCTAGACCAAATTAGG
GAGTACGGTTGAGCGTGATTTTCTACGCCGGCACTCCCATATCCTTTTGG
GGAACCTTTAGGTGGACAACTAGAGATCGATGCTCTTAGCCTGATTGGCG
CCACGACATGCTCAAGCCACCGTGAGCTCGCGGCGACTCACAAGACACGT
GTTTTCATGTCACTTCTCTCGATATCACTCTTGACATTGTAGTCATCAGC
TAGTTCGGACTCTATCGATTCATCATGAACCAGTCCTCTCGGCCAGTCAC
GTTGTCACGTCGACTGTCCAAATACATATCTATGTCCACAATGGCACGAC
CTTGGCCATTTCCTTTTCCTATAACCCTTGTCATCAAGCTCCACACCATC
CCCAGCCGTCGCGGATATGTCGCCGTCTCAGTCGCTGGTGGTGGTCTTTG
TCTCCGTGCTGCTCCTTTGGCGCCCGGCCGGCGCTGTCGAGTACCTGGTC
GGCGGCGACGCCGGCTGGGTTTTTGCCGACTACGACGCCTGGGCGAATGC
CCGCTCCTTCGCCCCCGGCGACGTCCTGTGTCAGTATTTATCCCACAATC
CTTATATAGATAGTTTCATACTGCTACATTAGTTGCACCGATCTGATTCG
CCGGTGCACGCACTAGTGTTCGAGTACGTCAAGAGCCAGCACAACGTGTA
CGAGGTGACGGAGGCGGCGTACCGGTCCTGCGACGACTCCGGCGCCGGCG
CCGTGCTCGCCACCTACGACAGCGGCTCCGACAGGGTCGTGCTCGCCGAG
GCCAAGACCTACTGGTTCATCTGCCAGATCCCCGGCCACTGCATGGGAGG
CATGAAGCTCGCCGTCATAGTATCCAGCGCGGCCGCCGGGCCTGCTGCGC
CGCCCTTCCCATCGTCGGCGGCGGCCCGAGGCGCCTCCCCGATCAGCTGG
GCGGCGTGGGCTGGGTTGGTGCTGCTCGGCGTGCACGTCCTGGTCAACCG
CGCTAGCTAGTTGACCTGCTCAGAAAGTCTCCTGTAGCTGTTTGTTCGTT
GGCACGTCAGTTTTTTGCATTTATATTTTTTTGACGAGTCTGTCGTGATC
GATAAACAGTTCAACCGAACCATTGGTTTCTTGGAAATTTGCATAGCCAA
ATGATTATTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.