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GrainGenes Sequence Report: AA033415

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Sequence
AA033415
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA033415
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CAGACCTTCAGCATCCCAATTCCCACGGCTCCTATCCAAGTCCCAAGTCG
ATAAAACACGACGCATCGAGCTGCACGAAGGAGAAGCAAAAGCCAAACCC
CAACAAGACGTCCAAGCAACCGCTTCCTTCGCGTAGCCGCGTCTCTCTCT
TTCTCTGCTCCGCTCTGCTCTGCTCTGGTCGTCTCCTGCCCCTACCCGCC
ACCGACAGAGATTCGATGGATCGCGCCGATCCCGCGCGAGGCCGCCTCGT
GGTGCTCTCCTCCCACCTCCTCGGCGCCGCCGCGGAGGGCGCGGGCCCCG
CGGCCCTGCTGGAGAGGTCGCCGGTGTCGGCCGCCGCGCCTCCGGCGACC
CGCCCCGGCGTGCTCGCCGTGGTGGACACGAGGACGGGGAAACGGTACGA
GGTCAAGGTCTCGGAGGACGGCACCGTGCGCGCCACCGACTTGAAGAAGG
TAACCAGTTGTCCGGAGCCGGGGCTGGCCGTGGACTATCTGTAGCTTGAT
CTGTGCTGTTCTTAGGAGCTTCTGCTCCAGAGTTCGGCTAGGATAAGCTG
AGCTCATGTGGGTTCGGGATTGGTTAGATTTTGATGTACTTGTCATAGCT
AGGCGCATGTAGAAGGGCTCAGTTCCACGTTCCAGTCCAGTAATTCAGAG
AAATTTTGAACCTGTTATTAGAGGATGCGGCAATGGGTGAGGTATCCTTT
TGTATAAATTGCAAGTGAGGATGTTATAAAGATCAAAGTTGTTATATAGA
TCAAAGGTGATAACCAGGAGAAGCTTATAACTTCTTTTGATCGGTAAGTG
ATTGCAAGTGACACTGAGAGCATGGTCTAGGAAACTTTTATAGTTGACCA
ACATGTATAGCTTACAGGGGAGCTGGCAGCCTAACTGATTTCTATTGTTT
TTTCAGTAAACATCTCGGTACTACTTTGTCTATAAATTAATGTGGTTTAT
AACATCAAATTTCAATGCAGAACCACTTAACGCATTTTACTTTTTGATTT
CGATGATGCTTTATCTGTATATCAAATCAAATCGGAAAGAAAAAAACTGA
TTCTTGTTGTGATATGATGTAGATTACCACTGGAAAGGATGACAAGGGTC
TTAAGACTTATGATCCTGGTTACCTCAACACTGCCCCCGTGCGTTCTTCC
ATCTGCTACATTGATGGGGATGAGGGAATTCTTCGCTACAGAGGTTATCC
AATTGAGGAGGTGTCTGAAAACAGTTCGTTTGTTGAGGTCGCCTACCTCT
TAAGTAAGTGTTACGAAACTTGTCTTTCTACTTAATTGTAGCACATCTTT
GCTGTTTATAATTTTTTGTTAATGACTTGCTGCGCTCAGTGTACGGGAAT
CTGCCTACCCAGAGTCAACTGGCAGGCTGGGAGTTTGCAATTTCGCAGCA
CTCTGCTGTTCCTCAAGGACTCTTGGTACGCTTTTTCCATTACATTTTCT
TTATTAGCCTTGATATTGCAATATATTCAGAATTTCAGACAGGTTTCAGG
CTTTGCTTGGGTTACAAAGTGATATACTGTTGCTCTTGAATTTTTGTCAG
GATATAATACAATCAATGCCTCATGATGCCCACCCCATGGGTGTCCTTGC
CAGTGCAATGAGCACACTTTCAGTCTTCCATCCAGATGCAAACCCTGCTC
TTAGAGTGAGTACTTTCTAAATGCAAGGAGTGGGGACATAGTTCCTACTC
AATGTATAGTAACCATGGAGTTTACATTTGTTACATGTTGTCTTAACAGT
TTAAAGTTGGCCCCTGACAAATGCTACCCATGCAGGGTCAAGATCTGTAC
AAGTCGAAGCAGGTTAGGGATAAGCAAATTGTACGAGTTCTTGGGAAGGT
ATGGCAATTATCTGATCATCTTCAGTTAGTGTAGTTTTTTAGGGTACTAC
TCAACCTGATTAAATTTTGGTCACCGTGCCAAAAATACCCCAAAATTTTG
CATGTAACCTCATGATGAAAATTATAATGATGGTTCATTCTGATTTTTGT
TAAGCATGTTGCTTAACGTTCTATCTCATCACAATTCGTGTAGGCACCAG
TAATAGCAGCTGCAGCCTACCTGAGATTAGCAGGAAGACCTGTTGTCCTT
CCTTCAAATAATCTTTCTTATTCAGAGAACTTCTTGTATATGCTGGACTC
TATGTAAGTCAAGTTACTTGGAAGCCCTATCGGTTTTACTCACGTATATA
TGCTAAAAGGTTCAAGTTTCTCTTTCCAATATTGATACATATTTTCCTAT
TTTTAATGTTTTCCAGGGGTAACAAAGATTATAAGCCAAATCCCCGACTT
GCCCGGGTTCTAGACGTCCTTTTTATTCTTCATGCTGAACATGAAATGAA
CTGCTCAACGGCTGCCGTTAGGCACCTTGCTTCGAGGTAAATCACGTCCT
TCATTCTCTGCTCAAGTAGTAGGAGTAAATTGATGCCTGAATAGAAATAT
TTATGTAGTGGTGTCGATGTCTTCACTGCTCTTTCTGGTGCTGTTGGAGC
TCTATATGGTCCACTTCATGGTGGCGCAAATGAGGTAAATTATATCGAGC
TTTCTCCTGCTTGATGCATTCAAGCTCTATAATGTTTCTACACATATTAG
AAATTCATAAATCTGAGAAGCAATAGGCCTTGCTTCATCAGCTCTTAGAG
TATAAACTTTATGAATCTTGCATCCACTCATAAAAGAAGCTCGTTTTTAA
ATGATGACTAACTTACACTCAGTAAGTTTTAGACTTGCGTATTTCACCTC
TGCCCTACACATGCCCTCATCAATACCCAAATTGAAACCCAACACAACTG
AAAGTATGTTATGACTAACGTCATGCAGTTATGCGTCATCCTACGTATCT
TAAATTTGTTGATGGCAGAAGCTCACAACGTCTCCATGATGACCAGTGCC
TCCAATTTCTCTCACGAAGAGAATCTCATATTGATACCTCAACTACATTG
CTCAGTATCTCCTCAGTTTGAACAGTCGGAACTAGTGCAAAAAGAATAAG
CAAGATTCATAGACGAGGAGGAACAACATATTGACCTGTGTGTAGATTTA
ATTTTTTTTTCGGGAAAACGCAATGACATTGCGTTTCTTTTCATTGCAAA
GCAGAGTTAAGGAGTACAATCCACCGAGCAGGTGGGATTACAGAGCTTAA
ACAGCTCGCTTATCACAAGAAAAAAAAACAAAAAAAAAACATCAGTGGAC
GTCCCAATCTGTTGGGATGATGACTCGGAGGCCGAGCGCTCCTGCCCTTG
CCCACAGCGCCGCTTCATCCCGGATCTTCGCACTGAGCTGGGATACTGAA
GGGCGTCTTGTCGAAAAGGCAAGCGTTTCGCTGCTTCCAGATCATCCAAG
CGACGAGAAGCGTGGCCGAGGCTAGGCCCTTGCGCATAGGCTTGGGGGCG
GCACGCTTGGCCGCAATCCACCAGTCATATAGCGTGGGCTCGTCCTTGGG
CGGTCTGTAGGGGATCCGCAGCCATGCAAGCATGTCGTACCAAACCTGTC
TAGAGAAGGGGCAGTGGACGAGCAAATGTTGCATCGACTCGAAATCCTGG
TCGCAGAGTAGGCACCGTGGGTGGTAGTCAAGCTGGTGTCTCTGTCGCCG
CTCCGCAGTCCAGCATCGATCCTTGTTGGCTAGCCAGATGAAGAACTTGA
CGCGGGGTGGCGCCCAAGTTCTCCAAATAAGCTTCCAGGCATAGCAGGCC
GTGGAACCATGGAAGGAGGCAAGGTAGCAGGACTTAGCCGTATAGCTGCC
GCTCGGATTCCAGCGCCAAAGCAACTGGTCGGGTTGATCAGTGACTGTCA
TGTGTTGAACCCGGCGCCAGATGCACAAGTATTGCCCAATCTCATCGATG
CCGACGACGCCGTGGATGTCGCGAGCCCAATTGTGATTGAGGAGCCCATC
CGCAACGGTCCTCTGTTTCCGTCTTCGCTTGGGAACACAGGCATAGAGCT
GAGGGGCTAATTCAGCGATCGATCTGCCATTGATCCATCGGTCTTCCCAG
AACTTGCCAGTGTGCCCATCTCCAATGACCCAATGGGTGGAGGCGAAGAA
CGTGTTTCTCTCATGAGTGGAAGTCTGTAGATCGAGACCAGTCCAAGCGC
GTCCAGGGTCAGTTTTGCTATACCAAAGCCAGCGAAGCCGGAGTGCTAAT
CCAGCCCTCTCCATATCCTGGATGCCGAGTCCACCAAGAGATAGTGGTCG
GCAAGCGGCGCCCCAGCTAACGTGGCAGTGCCCGCCGCTGGCTTCGGCAC
GCCCCTCCCATAGGAATCCTCTTTCCACCTTCTCAAACATCTTGATTGTC
TTCTTGGTGGGGCGGATTGCAATAATCTGATGGATTGACATGGCGTTCAG
CACGGATTTCACGAGGGTGAGCCGCCCAGCCTTATTCATCAGGCGAGATT
TCCAGGTGGGGAGCTTTCCAGCAGCCTTGTTAACCAGCGGCTGCATCTGT
GCGCTGGTGGGCTGACGTAGCGTGAGCGGTATCCCAAGATAGGATAGTGG
CAGCTCCGCGATTTGGCAGCCAAGTGCGCCAGAAACCAGCGCCGCCTCCT
CTGGTGAACAGTTGAGCATTGTGGCCGAGCTCTTCATGAAGTTAACCCTC
AGGCCTGATGCTTTGCCAAAAAGCTCCAAGATCTCCTTGACAGCACCAAT
GTCAGGCGGGGTTGGGTGGCAAAACAAGGCCACGTCATCGGCGTAGAGGG
AGATCGCCGGTATGGGACGACGTGGGTGGAGCGGTTGTAGGATGCCCAGC
TCGACGGCACGCATGATGAGGCGTCCAAAGATGTCCACTGCAAGGACAAA
CAGCTGCGGGGAGAGGGGGTCCCCCTGTCTCAATCCCCTCCTGTGCCATA
TCGGTGGACCAGGCTCGCCATTCATCAGCACCCTCGTGTTGGCAGAGGAG
AGCAAAATGGCAAGTAGGTCCAGGAATTTGTCGCCAAACCCGTAGCGACG
AAGGACCTCGAATAGGAATGACCAGGAGATGGTGTCAAATGCCTTTGCCA
GATCCAATTTCAGCAATACCCTTGGCATGCGCAGCTGGTGGAGTAGGCGC
ATCGATTGCCGGACTAGCACAAAGTTGCCGTGGAGGCATCTTCCAGCAAT
GAACGCGTTTTGGTTCTTGCTCACCAAGCTATCGAGCCTAGGTGCGAGAC
GAAGCGAGAGGATCTTGGCAGCCACCTTCCCAACCAGGTGCACCAGGCTG
ATGGGACGATAATCTCCGAGCGTTTGTGCATCCGGTCGCTTGGGGAGAAG
TGTTAGTAGCGCTTGATTCAGCCTGTGGAAGCCCCTTCCTCGTAAGGCGT
CAAGCTGGCGGAAGACTGTGAGGAAGTCTTGCTTCACAATTGGCCTGCAA
GCCTGGAGAAACTCAGCTGTGAATCCGTCAGGGCCAGGTGCCTTGCGAGC
CGGCAGACGTCGGATGGCACTCCAAATTTCCTCCTCGGTAAAATCAGCAT
CTAGGCCAAGAAGGTCTTCAGATGGCTCAATTAGGCCATCGAGGTTTAGA
GTGCACTCCCGGTCGATGGTACTGCCCAAAAGATTGTCGAAATGAGTGAA
GGCCGCCTCGGCCATGTCGGTCTGCTCCGTCAGCACGCGATCTCCATCCA
CAAGGCTGTGCACACGGTTCTTGTGCCTGCGGTAGGAGCACTGCAGGTGG
AAGAAAGTTGTGTTCGCATCCCCGTCTTTGAGCGTGGCGATCCGCGCACG
CTGGCGGGCAATGGTGCGCTCCAGGGACGCATACCCAAGATAGCAGCGTT
TAAGCGTCTTATGCAGCCAGTTTTCATGCGGTGTCAGGGGCCTGTCCTCT
TGGGCTTTGTCAAACTTGAGGATGATCTCTCTAGAAATAGCCATCTTATG
GCGAATGTTCCCAACAGATTTTGCACTCCAACTAGAGAGCTTCCTGGCTG
TGGCCTGCATTCTGCGTGCGAGGCGAAGGAAAGGATCAGGGCTATTCACT
GAAAGCCAGGCTTCCGCAACAGTATCGTGAAACCCGTCAAGGCGTAGCCA
GTAGTCCTCGAAGTGGAACCGCCTGTGCGTTGGCGGCAAGGGGGAGCAGT
CCAGGAGCAACGGGCTGTGGTCCGAGATGACCGAGGCCAGGCAGCGCAAG
TGGCATGCACCGATGAGTTCCTCCCAATCCACCGTGCAGAGGACGCGATC
AAGCCTAACCAGAGTAGGTGGTGATTGGCCGTTCGTCCAGGTGTAGCGCC
GACCGTTCAAGTAGATTTCCTTAAGGGCTAGGGAGTTGATGCAGCGTCGG
AAGCGGCCCATCATGCGTCGATCTAAGTTGGAATTGTTCTTGTCCTCTTC
CTGGTAGATAAGGTTGAAATCGCCACAGAGCATCCAGGGGCCGGAGCAGT
CACGGCGGATGTCGCGGATTTCTTGCAGGAACACGACTTTATCAGCGTCT
CCCTGAGGGCCATATACCACGGTGATCCACCACGGTGTTGCAACGTCGAC
AGAGACCTTGGCCGTGATAGCATTGGTGGTGAGCATAGGGTCGGTAATGG
AAACGAGCCCGCTCTGCCACGCAAGGAGGATGCCGCCACACGTACCGATC
GCCGGTAAGAAAAAAAAATCATCAAAGTCTGGCCCAAGCGTCTCCAGTAC
TGTGCTGGTGCAAATCGTCTCCATTTTGGTCTCCTGAAGACAGACGATGG
TGGCATTTGTGGTTGCCAACAGAGAGCGGAAAGCAGTACGGCGTGCCCTA
GCATTGAGCCCACGCATGTTCGAGATCAAAATCCACGCACGTTCGAGATC
AAAATCTTAAGGTTGTCAATCATAATAAACAGATTCGACATGATACAGCC
AGAACACAGCTAAGTCTCCACGAGACTGCCGGCAGTCAAAACATCACCGA
GCGGTGCGGCTGGGTCCGCGGGTAGCTCTCTGTCGACAATCGCGGCGATC
GCCGCAAGGATATCGACAGGGATGGGAAACGCAAACACACGATCATAAGC
ATAGCCTCATCAGTGATCTTCTCGTCGACGCCGATGACGCCCAGGGTGCG
AAGGATCTGCACCTGCGCTCTTCTCTCTGCCGTTGGTGGTGCACAGCTCT
TGGCCGAACGGCCACGTCTAGGCGAGAAATTGAGAACATGCTTGCGTGGA
CGGCAAAGAGTTTATGTAAACTGGCAGGCTGTAATTTTCTCCATGCAAAG
GAGACTGCATACCATTTATAATTTCAAAGGTGGGTAATCTTCGTCTGGTT
TGCATTGAAACTCGCAGGAGTGAATTTCTGAAGAAAGGCCCACCAACGCA
TTTTCTGTGAATATGTTCTGTTTCTCATCATGGCATCATGCAAGTAGATC
TATCCACTCAAGAATCCTCTTCCCTTCCCATACCACCCTATTTTCTGGAA
TGTACATGTAGTCCTGAAATACTAGTAGTTTTTTTATGTTTTTAATATCC
GAAACCTGCATTCTGGCTAATAGGGTTAATCTTAGCTATCTGTTACTGTA
CTACTGTAGAGATCAGAGGATCGCCATCTTATTGTGGTGCTAAATGTTAT
TTTCTGTTGTCAGGCGGTACTTAAAATGTTAAATGAGATTGGAAGTGTGG
AGAATATTCCGGATTTCATTGAGGGAGTGAAAAACAGGTGATATACAACT
CCTGCCTGATTGATATATATTTGGTCCTCATGTTAATACTTCAATAGAAT
TTCACTCCAGTCCTTCTTGATGTGCTATTGGTGTTTTACAAGAGATATCT
GTTCTTTTCCAGGAAGCGGAAAATGTCTGGTTTTGGACACCGTGTGTATA
AGAATTATGACCCTCGTGCTAAAGTCATCCGGAAGTTAGCAGAGGAGGTT
TTCACGATTGTGGGACGGGATCCTCTTATCGAGGTTAGCTATTCCTTATC
TGTTCAACTTTTGAGAGCAAGTATTTTCTGAAGAGATTATCAATCCTCCG
TTTTCTTTAGCTAGAGTTTGAACAGTGTTCTCATGTAATGAAATAGAGTT
TGCTCTGTTTATGCTATGAGTGTGACACTAACTTGGTGTATGAAACATTA
TTTTTTGCAATGAACATAGTAAAAAAATCTGAACCATGCAGGAGAGAAGA
ATGCAATAAAAATATACTATTTGTTTTCCCACTGGGTAAAAGGTTGAACT
TGTGAAAATCAGTAAGATAGGTGAAGTGCAATTCAGATTTGTTCCACTTT
GGATCCGAAGATGTTGAGAGGGACAAAAGTAGTAGACTCAAGCTGTCCTA
GTGTTCACCATCCATCTTTTCTTACGCTCGAGAAAAACTGTCTGTTTATG
CTATTCTGGTCCTTAAGATACTTCAACTAACATGTGCATGAAACACTGAG
GATTGGCATCAGGCTGTTTCTTTACCTACGTATATTCATTAGTATGCCAC
TAGTGTGATTTTATGTGATCATTAATATTTCATCCTGCAAAGAAATGTCG
AGTTTGACCAGCTATGTTGATACATTCATCATCTGCATAGTTATGCTGCA
AACTTGCGACAGAACAAGTGCTATTGTGGATATCTGATGGACATTGTAGC
ATCACTAGTTTTTCCGTGTTCTGGTGGAATATTGCTACCTCGCACCCTTT
AACCCCTCTTACCAGGGCTATCCAAGAAGAATAGTGTTACATCTGATCCT
TTCCACAATTGCCAATGCACGATGTTCCCAATATTGATTGATTATTATTC
TAGAAAGGTTTATTGGCCGACTTTTGAATACGGCTTAACACTCTTCAGGG
TCTGGTGGCCTTTCATTTTGCTATTAGTAGGGACCTAAGAATTATGTCAT
GTTCTTTATCCAAGGATTCTAAATAGCATGGCTATCTCTGTGCAACTGTA
ACTTTGTCAAATTGAGACACACCCTTATGATGCATTCTGATGCCATGCCA
GGTCGCCGTTGCTTTGGAGAAGGCAGCACTGTCAGATGAGTATTTTATCA
AGAGGAAGCTTTATCCAAATGTGGATTTTTATTCTGGCCTAATATATAGG
TACATTGGTTGTTCTTCCAACTTGGGAGTCTATTTTCTAACCTCTGCACT
AGTTTTGTTGTTGCAGTGCTTAAATTGCGTCTCATTGATTTTCAGGGCAA
TGGGATTCCCTACAGAATTTTTCCCTGTTCTGTTTGCAATTCCTCGCATG
GCTGGTTGGTTAGCACATTGGAAGGAGTCACTTGATGACCCCGACAATAA
AATTATGAGGCCCCAACAGGTCAGTGTCTACCAATAGATATATGTAGAGA
ATTTGTTTTCTTGCTTCTGAATTCAACGACAACCATTCTAACTTCCTGTG
TGGGTATTTGACAATGTAATTTCTGTGATCAGTGTATAGAGGCCAGCTTA
GAATTTTTATTTTTGGATGTGTAATGGGAAATATATTGCTCATACTTGTT
ACTTATTCTTTTGAATGCCGTTTGGTGGAGCTAGATGTCCCCTGTGGTTT
AGCAAGGATCTCTGCGTGAGATATGTTCCTGTGTGCACCTTTGAAATGAT
CAAACAATTATGTTTGTACAGAAGTTGAGTCATTGAATTCCAGTCGTACT
TTCACTAAACCTTGTCCTCCTAGGCTACTTTTATTTCTTGCCACTTCTCA
AAATTGGTTGAACAAACTATCCCTTTAACATTGTTTGAGTCTGTTCGCAA
AAAAAAAACATTGTTTTAGTCATGCAGTTCCTAAAATGAAACCATCCAGG
ATAGATCTTCTCTTATTTCTGTAACGATTGTTTTCTGAATGGTGCTTTGC
TATTTCTTCAGGTATATACCGGTATTTGGCTGAGGCATTACACCCCTGTG
AGAGAACGGGTGCCACCGAGCGACAGCGAGCAGCTTGGCCAGATCGCTAC
ATCAAACGCGACGAGGCGTCGCCGCGCAGGTTCTGCCCTGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.