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GrainGenes Sequence Report: AA002607

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Sequence
AA002607
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA002607
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GAGGGGGCCAACTTTACCCAACAGCGGCGATACCACCAAACCGCGAGTAG
CTCCCCAAAATCAAACCCCTCGCTCGCTAAACCCTCGCCTCCGCCTCTGA
TGGCGACCCCCGGCCGCGCCGGCCGCTCGCTGGCGCCGAATCTCCGCCTC
GACCGCGCAGCCCGGCCCCGCAAGACCCCGGTCGTCCTCTCTCTGCTGCT
CGCGGCCGTCGTTGCGGCGGCGCTCATCCCGCAGGCCGCGCTCGCCGCGT
CCGGTGGCATCATGGGCGGGCGCTCCTCCTCCTCCTCGTCTTGGGGATAC
AGCGACTCGTCGTCTTCGGATTCTGATTCTGATTCGGAATCGTACTCGTA
CTACTCTTCGACGACTTACGTGTCGGCCGGCACACGGCCTCCGGTCAAGG
CCATGGACGTCGGAGACGGCCCGGGCACGGTATTCTGGGTGGTGGCCGTC
GGTCTCGTTTTGCTTTTCGCCGCCGTGATGTACTGCCTCCGGCCGAGGAC
GACTGTGGTTAAGCTCCAGGTACTCCCGATTTTCTACACCAATTTACCTG
TCCTTTTCACTGGTCACTAGTCCATGGAGGTTGTCACGATCTCAGACTGC
TTTTGTTCGCAATTCCAGGTTGCCTTGCTGGGCTGGGCAAAACCGTTCCA
GCAGGAATTAAACGAGATTGCTGACAGAGTGCAGGCTTCTAGCAGGCGTT
CGTATAAACTCATGTTGACTGGTATGTGATTTCCAACTTTTTGGGGTTCT
AAATACTGCTTATGATGCCTCTGCAATTCGACTTCCATGCCTCATTGTGT
AGTAGCTTCAGTTTGTCGCTAGCTTTGAAGTTCTGCATTGTGCAGCTTCA
GTAGAAGATAAAGACTGCATACTGGTGTCTTGTTCAAATGCTAACATGCT
TGCCTTTATGTAATGTGCTTTCTGTTCAAACTATGTTTGGTTCTGCCGTC
AAGTTCACCCTCTCATTCAAAACCAGTGTAGTAGCTTCAGTTTGCCGTTA
GCTTTGAAGTTCTGCATTGTGCAACTTCAGGACTAGAATATAAATATGGC
ATACTGGTGTCTTGTTCAAATGTTCAAATGCTTGCCTTTATGTAGTGTAT
TTTCTGTTCAAACTATTTTTTATCCTGCTGTCAAGTTCACCCTCTCATTC
AAAACCAATGTCCAATCGTTTAACATATACAAAAGAAATGAGAAAAGTTA
GCTTGAACAGCATATAATTAAATCCAGTCTATGAAGTGAAGTGGCAACTC
TTGAACTGAATGTGGTTTTTGTCGTAGTTTCTGCGAGCATAGACAGTTTT
CTTGAGGCAGGGAGTTTACAGATGTACTTAGGCTGAAGTCGAAACTCTTG
AACTGAATGTGGTTTTTGCTGTAGTTTCTGCGGAAACAGATATATCACTT
GAAGCAATTCACAGTTGTACCTAGTCCATATGTTCAGACAAGTTGACAAA
TATGTAAGAGCATGCATATTTATGTTTGTTTGGATAAGAGTGATTATCAA
ATAATTACACGGACATAAACTAGCCTGCTTATTCTGCATCGCCCAATGTG
ACTGTAATATGATGGATATCAGGTACTCCCACCGTCCCATAATATGAGAT
GTTATTACACCTATTATATGAGTATATATTGGTTGTAATAACATTTTATA
TTATGGCATGGAGGGAGCACTTCTTACTTTGAATACAACTTATTAGCATG
TAAAGAAACTAGCACGTTTTCTGTACTACCCAATGTGTCTGTAATAGTCA
GGGCTGCACTACGTTATCAAAATACATAATGGTTATGTGCCCACTGTTGG
TTGTTTACCTGCAAATAGTGAAGTCAGGGCTGCACTACGTTATCAAAATA
CATAATGGTTATGTGCCCACTGTTGGTTGTTTACCTGCAAATAGTGATGG
ATATCATATACTTTTACTTTCACTACATCTTATTAGCATGTACAGAAACT
AGCCTGCTTATTCGCAGGACCAAATGTTACTGGTATGGTATTCAGGGGCA
TACTAGATTATCATATACATAGCGGTTATCTGCACAATTTTGGTCATTTT
CCCTAGATGTTTTTACTTTCAATACATTTTGTAGCGATATGCCGATATGG
CTGATATCAGTTGTTCGTTTGTACTGACTTGTTTATCCTGTTCCTGTAAC
TCATTATGCAGAGACCATATGTTCCTTGAACCGTCACAAGGATTGCTGCA
TATTTTCAAGCTTATCAGTAAGAAACATGTACAATATAGCTCTTGTGACA
CATAAATCTATGTGGCTTGATGGTTCTTCTCCTTTAAGATGACCACTAGG
ATTTTTATGCACTAACCTATAGTTGAACTCACTGAATCTTGTAATTTTGC
TGTTTGATTTACTTTAGGTCCATGTAAAAAATGGAACGGATTCTTGGGAG
GAGCATTTCGATAAAATTTCTATCGAGGAGAGGAGCAAATTTGATGAAGA
AACACTTTACAGCCTGGAAGGAATCAAGAGGACAAAAGAGTACTCCAAGA
AACAAGATGGCTCCAAAAACGAATATATTGTGGTATGTGCACTTCATGCA
CAGTAAAATGTTTCCAGAAATGGCCGTCTATGCTTCCTTTTCGATGATAA
CTACCTGTTGATTGATACATGTTGGTGAACACAATTATTTTATTGATTTA
TTCTTTTGTTATGAATGCGAAGTTTCTTGTTTGCATAATTACTTCTGGTG
ATGATTTCCAATTCCTCCAGGTAACCATCATTGTCGCTGCTAATGGAGCA
CTGAAGTTTCCAAAGATCACAAGACCTGCAGATCTGGAAGCAGTAGTTGA
AAAACTCAACTCTATACATGCAAGCGATATTCAGGTACGGAGAATATTTC
CTATCATAATTCACAACTGCTTTCAGGTGTGTAATTGAGGCAAATCAATG
ACATTATTTTCCATGCCAATCGCTGATAATTAATTTCCTACTTATGCCTT
CTGTCTTGGGGTATTCATGTTTTGTGGACTCCGCAAGAAGAAAATGACAT
ACTTACCGAAGAGAAGCTTCTAACAGATTATCCACATCTGAGGCCCCATT
CTGATGACTAAGAAGGCGCTTGTTTTTCATATTCTTGGATGCCATAGTAT
ATAAGATCTAGTCAGGAAAAACGTTACATGTAAAAAGGATACGGCAGGCT
GGTAATCACGGTCACTTTATCTTCAAACAAAATCATCTAGAATCTAGGAT
ACCAATTTCCATCCGTGCTGCAAGTTTGCTGTAGCTTAGAGCATCTCCAC
TCGTTGGTCGAACCCAGGCCGAAATCCGGACCAAACTTTGGCTGGACGGC
GCAAGTTTTCGGCATGAGTACGTCCAGTTTCCCACTCCGTACCCAGACCG
AATTTCTGGGTCGCCCGTTTCCGCTCAAATTCGGCTCACGTTTATCCAAA
TTTCGGCATAGTTTGTCATACGATGAATACAGAACACTTTAAGACCAAAG
TTTGGAGAAATTTTAAATAGAGTTCGGCGTAAATGTAAACATAGTTCGGC
ATGCAATAAAAGCATAACATATTTCGGGCAAGTTCGGCCAGTTCATGCTT
AGCATCTACGTCGTGTTGCCCCTGCGTATCCATAGGTGCTCGACAAGATC
ATCCTGCAGCTGTTGATGCATCACCGGATCTCGGATCTCCTGACGTATTA
CGATGAATGCAGCCCATGTTGGAGACACCTGATGATCAGGCTCGGCAAGA
GAACCCTGTCCTGTAGTATGGCTCGTCCTCCTCGAGCAAACTCATTGGAT
CCTTCCTCTCATCCTCAATGATCATATTGTGCAAATTCACACAATGTTCA
TCACTTCCCACATCTGATCTTTCGACCAGGTCATAGCAGGGAACCGGACA
ACTGCAAACCTCTGCTGGAGCATACCAAATACCCGCTCCACGTCCTTCCT
GCAAGCTTCCTGTTCCTTGGCAAAGTGAGAATGCTTGGGGAGCATTGGGC
TTGAGATAGTTTTCACAAATATTGGCCATCTTGGATAGATGCCATCTGCT
AGATAGTATCCTTTGTTGTAGTGGTGTCCACTGATCTCAAATTTCACAGG
GGGAGCATGACCCTCAACAAGTTTGGAAAAGACAGTTGAGGACGTTGATG
TCGTTGTTCGATCCTGCCATGCCAAAGAAGGAGTGCCAGATCCAAAGATC
ATGTGTAGCGACTGCCTCAGGTATCACAGTGCATCCTCCTTTATGGCCTT
TGTATATTCCTTGCCATTCAAATGGACAGTTCTTCCACTCCCAATGCATG
CAATCTATACTTCCAAGCATACCAGGAAATTCTCTACTTTCATTGACTGC
GAGGATCCGAGCAGTGTCTTCAGCAGTGGGTGATCTCAAGTACTCTTCCC
CGAACACTCCAATCACCGCCATGCAGAACCTGTACAAGCAATCAAGGGCG
ATGGACTCGGTGATGCAGAGATAGTCATCGGCAGCATCAGCCGGCGCTCC
ATATGCAAGCAACCTCATTGCCACGGTGCATTCTCGTCGCCGTCGGAGTC
CATGGCCGAATCCGGCCAAATGTCGAACACTTGGCGGGCGTGGTGGTGGG
AGCACAGAGCGAAGCAGAGCTACGGCGAGGCTAGGTCGGCGAAAGCGGTG
GCGGAGAAGGCGTGGAGGTGGACGGCAACTACGTCGAGCGTAGCTAGAGG
CGTGGGCATGTCTCGGCGTGGTGAAGCTCCGCCGGCGAAGTCATGGCGAT
AGAGCTCTTCGCGGCAGTCTAGGCGAGTGGAGTGGGTGGGAATGGGACTG
TCTCGCCGACAGAGCTGGCCCACGCCCTTTTTTGCGGCGTCCCCAGGGCG
TACCCGGGAACCTGGGTTCGTCCTGGGTAGGCCGGACCAAAACACGCCGA
AATCCGAACGAAAACAGGTCCCTGGGTACGCGACTGGGCCGATTTTCGGC
GTCCGGACTGAATTTCGGCGTCCGGATCGGCGTCCTGGGTAGGCGAGTGA
AGATGCTCTCAAACTTTAGTTTGTCTTGGTAATGGGTACAAATTAGGTAG
GTGACTGGTCTTTTCTGTTCCTACCTTTTAATTTTTTTTTGAGGGTTGTT
CCTACCTTTTTAATTTTTTTTAGGGTTGTTCCTACCTTTTAATGTGAAGG
TGGCTCAGTCTATAGGCGTCCATGATGCTTCAAGGTCTGCAAAACTCTGT
GCAATGCGCCTTCCTAATTTAGATTACTTGTCAATTTACATGCATATATC
ACTATTAGTAATTGATATGCCCATTTTTTATAATAAAAATACTGGAATGT
TGTATTTTTCGCCTGTGATGTTCAAGAGCATAGTGCACTGATATTAACAT
TTGATTACGTTTTATGCTTTTATGATCAAACAATTATACAAGAAAATGGA
GGACTTCGAGTGAAAAATTCCGATGATTGTATTGGTTCAAAAGAATTTCG
TAGGTAGGACAATTTCCTCGGAAAAAGTGTAGTACACTCATGTGATAATC
AATCTTCTGTTCGAACTTATATAATGTCCTTTTTGTAAAAAAAAGTATAT
TTGCACCATGTGTTTTGTTTTCCTTGAATATCATCTAGTAAATTGGTTAA
ATCCAATCAACCGTTAGAACGTATGTTCTTCCTCTCTTACCAACACAAAG
GCGGTTAGGGACTGCTCTCTCTCTTCTCCAGTATGGGAGTTAATTGGATA
AAACTATCACAATTGAGGCTGTCAGGACGGGTCAGTACTACTTTCGGTAA
TTTTGGCATGTCAGTACCAATTTTGGGGTTCAACCGTTGCGAATCGACTA
ATTCACGACTACGAGCACTTTGACACGCTTTCTGACGGCTCGGGCCCAGC
TGTAAGTGCTGAGTTGGCGCCACGTGTCTAGGAGAGGCTGAGGTGGAAGT
GAGGCCCACTTGTCAGACATATCTTATTTTATTTTTTATTTTTCTCTCCT
ATTTTACTATTTGCTGCCAGTGGGTCCCACCCGCCAGCCTCACTAATATT
TCCCCACCCACAAGTCAAAAATAAATTCCCCACCCACCTTCTTCCCACCT
TCTTCTTCCTGGAGGCACCTGGAGCCTGAGCCTAGGCTCTAGATCGAGGT
CGTTCGACCGTGCTCTTCCCCAACCTCCAAGGACCGCTCTAGCCTGCTCG
CCGGCGGCCACTGTCTCAGTCCTGCATTAATTCACGCTGGTCGTCATCGA
TTCCAGCGGGCGGCGGCGTGATCCCGGCCAGATTGCTTGATGGCGGTGGC
CAGGGAGAGGGTAGGGGCCGTGCCGGAGAGAGGGCGCCATCGGGGCGACG
ACCAGAGAAGATAGCGCAAAGGGCGGCATAGAGGGGGCCGCAGCGGAGGT
CTGGGAGGACGGCAGTGGAAAAGGCCAATGGTAGCCGGAGGGCTCGACTG
TGACGATGGGGGAGGGGGCGTCGGGCTCGGGGAAGAGCAGGGGCAGATGG
TGGTGGCTCCTGCAGCGAGGAGGAGGGCACGGGGTGGCCGGAAGTTGCAG
GGGCGCGGGATGGTGCGGCCCGCGGCCAGGACGGTGGAGGACGCGACCTC
CGGCGAGCGGGGACGAGGCAGCCACAGCGATACCACCACGCTCGTCCTCC
CGTCCTCGGCCAACCTTTCCTCCTCCGGCCTACAGCACCTCGTCGCTGTT
CGGCGTGATGCCGCCGCAGCTGGCCAGGCTCAGGTCCTCCACGTGCCTCT
AGGAAGAAGAAGGTGGGTGGGGAAATATTAGTGAGGCTGACGGGTGGGAC
CCACTGGTAGCAAATAGTAAAATAGGAGAGAAAAATAAAATAAGATATGT
CTGACAGGTGGGCCTCACTTCCACCTCAGCCTCTCCTAGACACGTGGCGC
CAACTCAGCACTTACAGCTAGGCCCGAGCCGTCAGAAAGCGTGTCAAAGT
GCTCTTAGTCGTGAATTAGTCCGATTCGCAACGGTTATACCCCAAAATTG
GTACTGACATACCAAAATTACCGAAAGTGGTATTGACCCGTCCTGACAGC
CCCAATTATGGTAGTTTTATCCCATTAACTCCCAGTATGAACACCGTTCC
CCACTTCTCGCGTAAGAAGGAAGGGAACTCGGTTATTCATCCAATTGTAC
TAGATCTTTGTTCGTGTGTGCTACCGGCGATGGAGGCAATAATGTGATTA
GACCCTTTGTCCTTCTCCGGGATGTGCAAGCGGTTGCAGCAACTACAATC
AAGTAATCTGTTCTCACACTACTCCAACGGACACCCTCTCTTCCTCCTCT
CCCCTGCCCCTGCTACAGTTTTCTCGAAACTTCCCGTGGGCGCCGGGCCA
TTCCAAAGCCGAACTCGTTGGCGTTGCCAGTTGAGGGAGGTGGAGGAGTG
GCTCCGGCGCATGTAGATTAGGTCGCTAGGCTCTCGCCATAGGAGTCGTA
GGATTAGATTTAGGTTTTCTTGTGTCTTCCCATGTGGCGTATGGCGAGAT
GCCGCTCGGCCTGTCCCCCCTCCCCCCCCCCCCCCCCGGTGTTCTTGCAC
GGCGATGGGTGGCCGTCTTCGCTCAGGCCTGGATAGCTACTATGGTGGGA
GCTTGCTAGGGTTTGGGCTGTGGGCAGAGGCCTCTCTAATAAGTGCCTCA
GCTGCAACTGGATCTCGCGAACTGGCGGAGTTCTCCCTCTGGCCGGCCTT
TGTGGCGAGGGGTGGGAGGAGGATGACGCGTGGGTCGCGGGGTGTGTGCG
GCGGCCTGGAAGCTTGATGTGGGCTCGATCTGACCCGATCCCGCGTTTGC
TGGAGGAGAAGGATCCCGCTAGGATGCTCCGATGGATGGAGATGGGCGCG
GGGGTTTTCTCCATCTCCAGCGGCTTCCTCCATAAGGTCAGTGCGCCTGA
ATGGCTGCTACTTTCTGCGCGTCTTCGTCGTTCTTCTCTTGCCGGCCTTG
GTGGCGAGGGGAGAAGTAGTGGCGGCCACAGGCAGCGGTTTGTAGTTGAA
CCAGGCCTGCAGCATCAACGAGCTCAACACACGGAGGGTAAGGGCGCCCT
CGCGATCTTCGGCCGATTCGATGGCCTTCTCGGACGCACGAGATGCGTCT
TCTCAACCTCCAGGACGAAGGCTACTCCTCGAGCTCAGCATCAGCGTTCT
GCGCCCTCTCGAAGCCAAGTGGTGCGTCCCTGGCGGAGGAAGGGTGGCCG
GAGCTGGAGACTCGTTGTCGGTGGAGGAGAACAGGGGCTTGATTGCTTTT
TTATTTCTTTCCCCAGGGTTCTATTTGTAAAAACGCAGCCCTATGAAATG
TATTTGGGCCTGTGTGCAAAATTATACCCACAGCTTTGATAATAAAAGCT
GCATCATTATCGTTCAAAATAAAATCTGTTCTCGAGGATTTTCTTCCAAC
GATAAATTATATTGGTCCATAAAGGCATGCTAGTAGTGTTGTCAGCTACC
AACGATTCGGCGACGATGGTGTTTGGTCAAAGCGTCGACAAGCTTGGGGC
GCAGCCCCACCGATGTTCCACTGACGTTGTGTTTGTCCCTGTCTCTTGGG
ACAGGCTTAAGTTGCAGTCTTCCCTCGAGACGATTTAGAGTTTGCTAGTT
TTTTTTTATGTCTGCTGCGTTTTTTGCTGCTCCCATCATTGTAAGGGCAT
GTATAATGCAAGATGATTAAAGAGATGTTTAGAAAAACAAATCGATTTTT
ATTTAAACACTAGTGCTTATTTACACTAGGTAGATGTTTAACTAGACACC
TTTCCAATGCAAATAAGCACCCGTGCTTAACAAAGAAATTGTTTTACGTT
TTGCAAGCACCTCTTCAAGCATCCTTCATTGTAAATGGACTAGTTGTTTC
TTTGACATATGAGTAGGATCTGAAGTACATTCGGATTGTCCTCTATAAAT
TTTCTGCCGTGATAATCTATATCTAATAATAAAGCATGAAGTATTTTCTT
CCAACGATAAATTATGTTGGTCCGTAGAGGCATGCCAGAAGTGTTGTCAG
CACCAACGATTTGGCGACAATGGTGTTTGGTCAATGCATCGACAAGCTTG
GGGCGCAGCCCCACCGATGTTTCAATGACGTTGTGTTTGTCCCGTCTCTT
GGGATGGGCTTAAGGTCTTCTCTTGAGACGATTTAGAGGGTACGTACAAT
GCAAGATGCTTAAAGAGGTGTTTAGAAAAGCAAATGAAAAAATTTCATAT
AACCCCTTATCAATTGGATTTGGGATGCTATGTTTAATCTAGACCAAATA
ACCCTCCTAACTATTCAAAACCAGACAAATTATCCCCCGAACACATGTAG
GTTGTTTTAATCAGTGGCTTTGCGCACGTGGAGTCTGGAGAAGTTGCTAA
AAAAGAAAGGGCATGATAGACAATGGTCAGACCAAATCTCCACGGTATTT
CTCTCCCACGCAATCGTGGTCGATGGCCGCCACCACCCGTGCCTCTTTGC
CGGCCCGGTCCGAATACTCCCGCCCGCCCTAGCCCCTCGCCGCTGGATCC
CACTGCTGGCCGACACGATGGTCGACGGACGCCGACGCCCCCACGCATCC
ATGCCCGCTCTCTCCTCCTTGTCACCGGAGCAGCCTCGGCGTAGCTTGCG
CCCCCTGTTGGCCCCCGCCGCTGCATGCCCCTGGACTCGCAGTTGCGCAA
GAAAAGGGCCGATTTTCTTCAGACATTAAAATAAAAGAAGCAAAGATAAC
GAGGCATGGATGTATGTGAAACATGAATTTGGTTTGTTGCAAAGACAACA
AGCAGTATACGTTTGAATGCAATTCATAACTAACAATTGAAGCAACATGC
TGTTACAGAAATTTACTGAATTTTCGGACATTCTTAAAACCTCTCAAACA
TGGTGCTCCGAATTGTCATTGGTTTCTAGTTAGTAATTGCTTATCAACTG
ATCTTTCGTAGGCTTCCCTGCTACTCATTGAAGCTCAGACATGTCGACGG
TGCTAAGGTCGACGCAACAACAAACTGCAGTAGGTGGTCTAATTGAAACA
ATGAACCGCTCTTCTTGGTATTCAGACTTGCAAAGATGGGTTTGCATTGT
CAATTCCTCGAAATTGATCTGTGCGTTTCCTCAGTATTCTCTCTTTGACA
TGAGGCCATGCTTTGCAGCGCTTCTGCTACACCCATGGCTGCTGACACGA
GACCAAGAGATTGTAGCATCCCATTTGTCTAACAACTGTAATGCTACTTG
GTTTAGTAATATAATGGCT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.