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GrainGenes Sequence Report: AA002405

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Sequence
AA002405
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA002405
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGAGCGTCGGCGGCGGCAGCCTGAGCGGGCCGGACTCCCGCGTGGAGAC
CATCTCCCGCCTCGCCCAGTGGCGCATCGACACCTTCGGCCCCTGCTCCT
ACCGCCGCTCCGACCCTTTCAAGCTCGGCATCTGGAACTGGTACCCTCAC
CACTCCCAAACTCGACCACGCATTCCCCATCATCTACGCCCCCAATTCCA
ATAGAAATAGGAGCATCTGAAATTCGATCTAAACTTCGCGCGATTTGATG
AGACTACCCGCCGGCTGATGCGATGAATCCCCCAAAACAGGTACCTGTCG
GTGGAGAAGAGCAGGTCGGTGTACGTGCGGCTCTTCCCGGAGCCCGGCCG
GCTCGCCAAGGAGCAGCCTCCGCTCGCCCGCTTCCTGCTCCGCGTCTCCT
GGGCCGGACCGCCTCGTCGCTCCACCGTCTCCCCAGGTTTTGCTTCTCCT
GACTGTTCTGCTATGCATATCCATTTGGTAAAGGTTGAAGCCTTGGTGCA
TATGCTGTTAATCAACCTTTACCAAGTACAGTACTGTAGTTGTTTGTGTG
GTTGCATAGGAAATAGGAATCTTCACCAATCATTAGGCTATAATATGTAT
GCTGTCAATCAACCTTTACCAAGTACAGTACTGTAGTTGTTTGTGTGGTT
GCATAGGAAATAAGAATCTTCACCAATCATTAGGAAATAATATACAGTGC
GCAAATGTGATGTGTTCATCTGATCTGATAATTTTAGTGCCTTTTGTGGA
CTGGATGTGCTGTGATTTTCTATGAGAAGTTCTCCTCTCTCGAATCAGGC
TTTCACCCCGCTTGATAAATAAAGCAACCATCCACAAGAGAAGTTCTCCT
ATACTAACTAGAATACCGTCATTTGGAGGCAAATATGTATATCTAAAGGA
AAAATTAAATAGAGTTGAAGAAGAAAGAATTTTCTGATCCTTAGATTTGG
CACATGGTCTAACATATGTAACCTTTTTTCCAACAAAGGAAGATCTTATT
ACTTATGGCCACCACATCAAAGTGATGGTGCGGCCAACAAGTATATTCCA
GTCTATGCATTGCCACGTGCACATAACCAATCATTAAGAAACATCACCAA
TCATAGGAATTAAGGAACATCACCAATCATTAGGCTGATATACAGTGTGT
AAATTCTCAGTGCTTGTGATGTGTTCATCTGATCTGATAATTTTGGTGCC
TTTTGTGGACTGGATGTGCTGTGATTTTCTATGAGAAATTGTCCTACACT
GACTGGATGGTAGAGGCTATGGTTCTACCAGATCTCGGACGTAGATTATA
GGGGTGGAAGTGAGGGCGAAGAGGCTGGAGGCACAGAAGCCGGCGGCTGG
GCGCCATCGCTGCGAGAGGGAGGAGGCGGCGGCTAGGGTTTGGGGCTCCC
GTCTCCTGAGGGAGACGACAACAGAATATGTTTATTGTCTGATTATAATC
AAAGGGGTACATGCATTTATATAGGAGGGCATCTCCTCTAAACCCTAGAT
AACTTGGGCTAAGCCCCTAATTGGGCCTCTTTCGTGTATACTGGAGCCCG
ACCATAACATCTCTCCCCGCCTTCTCAAGCAGCTCGTCCTCGAGCTGAAC
ATCTGGAAACTGCTGGCGGAAATCGTCGAGCTGCTCCCAAGTTGCTTCCT
CCTCGGGCAGGCCGGCCCACTGCACCAAGACATGCCACACGCCGCGACGC
TGCTGTGCCTGCATCACCTTCGCCACCTTCGCGGGAGCCGGCAGAAGTCG
GCCATCCGAAGTAGGAGGAAGGGCCGGTGGCGCTGTAGGAGGGTCCCCGC
GGTAGGCCTTCAGTAAGCTAACATGGAAGACGTCGTGGAGGCGAGACCTA
GCTGGCAGCTCAAGGCGGTATGCGAGTGTGCCAACACACTCCAGCACACG
AAAGTGACCGGCGTAGCGGGGTACCAATTTGCGCTTGGAGCGCGGGTCCA
GGGACTGCGTGGTCATGTGAAGGAGGCGCAGCCACACCCAATCGTCCACC
GCGAACTCCGCCTCTCGATGATGAGCATCATAGTACTTCCTGGCCAGCTG
TTGTGCTTGGAGAAGACGCTGGCGCGCCTCAGTCAGGATCTCGTCGCGGG
TGTGGAGTAAGTCGCCCGCCGTCTCGGACCGAGCCGTGCCAGGCTCAAAA
GGAAGCATCGCCGGAGGTGGGCGCCCGTAGACTACCTCAAAAGGCGTGGC
ATGCAGTCGGAGTGATAGGAGGTGTTGTAGCAGTACTCCGCCCACGCCAA
CCAGTCTACCCAAGCTCGTGGACGATCACTCGTAACATAGCGCAAATACA
TGGCGATCACCTTGTTGACCACCTCGGACTGGCCATCCGTCTGAGGGTGA
AACGCCGTGCTCATGCGGAGCTTCACGCCCGCCAGCCGAAAGAGATCCCG
CCACACGTGACCCGTGAACACAGGATCACAGTCGCTGACGATGGACGAAG
GAAACCCGTGGAGGCGGACGATGCCGTCGAAGAAGGCCCGCGCCACGGAT
GCGGCTGTATAGGGGTGACCGAGGGCGATGAAGTGCACGTACTTGGAGAA
GCGGTCAACCACCGTGAGAATGACGGATTTGCCGCCCACCTTGGGAAGGC
CCTCGATGAAGTCCATGGAGATATCTGCCCACACCTGGGAGGGTATGTCC
AGTGGCTGTAGCAGACCCGCGGGTCGCAGTCCGTCTTGTTCCGCTGGCAT
GTCACGCATGACCGCACCCAGTCACGGACCAGCGCACCATCACCGGGAAT
GTAGAAATCAGCACAGAGGCGATGAAGGGTCTTCTGCACGCCCTCGTGTC
CTGCAGAGTGTGCCAGGGACAAGACCTGGTGGCGCAGGTCACCGTGGTCG
GGCACGAAGAGGCGGCGCCCATGTATAAGCAGCCCATCGTCCAGGCGCCA
GGGCGCCCCCAGCTCGCCAGTGTCAAGGCGCCCGCGGAGCGCCTGTGCGT
TCGCGGCAGTAGAAGTTGCTCGGCAGATGTCATCGATGAAGGCGAAGGAC
GGCCCGGAGCGGATGCATAGGATGGCGCCCGCCGTGGCAACGTCGTCTAT
GACATCCTTAGTGTCGCGGCGGGACAAGGCGTCGGCGACCGTGTTGAGAC
GGCTGGGGCGGTACTCGACGGTGAAGTCGAAGCCGAAGAGCTTGCTGATC
CACTGGTGTTGCGGGACGGTGGAGAGGCGCTGGTCCAGCAAGAACTTGAG
GCTGTAGTGGTCCGTACGCACACGGAACGACCGGCCCCAAAGGTAAGGTC
GCCAGTGCGAGGCGCACTGCCTGGACCAGCCCGATAAGCTCGCGTTCGTA
TGCCGCGAGCTTGTGATGGCGAGCGGCGAAGGGGCGGCTGAAGAAGGCCA
GCGGCCCTTCGCCCTGGTGGAGGACCGCGCCGAAACCGATGCCGGAGGCG
TCGCAGTCCACCACGAACGGCATGTCGAAGTCCGGCATCTGGAGGACGGG
TCCCGTCGTGAGCGCCCGCTAGAGAGCTTCGAACGCCGTAGTCGCCTCCT
CGTCCCAGGAGAAGGCGTCGCGGCGAAGGAGGCGCGTCAGTGGCGCGGGG
ATGAGGCCGAAGTCCCGGATGTACTTCCGGTATTAGCCGGCGAGGCCCAA
GAAGCCTCGGAGAGCCCGCGGGGACCGCAGGGTCGGCCACGCGGCGACGG
CGGCGACCTTGTCTGCGTCCATCGCGACACCTTCCGCCGAGATGACGTGC
CCCAGGTACGCGAAGGAGGTCGTGCCGAACGAGCACTTCGAGCGCTTGAG
GTGGAGACGATGCGCTCGAAGCTCGTTGAAGATGATGGCCACGTTTTGTA
GGTGCTCTGCCTAGGATGAACTGTAGATAAGAATGTCATCAAAGAAAACA
AGCACAAAACGGCGCAAGTATGGGCTGAGCACGTCGTTCATCAGGGCCTG
GAAGGTTGCCGGCGCGTTGGAGAGACCGAACGGCATCACCAGGAACTCGA
AGTGGCCATGGTGAGTACGGAACGCCGTCTTCTCGATGTCGTCCGGGTGC
ATGCGCACCTGATGATAGCCCGAGCGCAGGTCGAGCTTGGTGAAGAAGCG
CGCCCCGTGTAGCTCGTCCAAGAGCTCATCCACGACGTGGATGGGGAACT
TGTCCTTGGACGTCATGGTGTTGAGGGCGCGGTAGTCGATGCAGAAGCGC
CATGTGTCGTCGGGCTTGCGCACAAGGAGCACCGGGGCGGAGAACGGCGA
TGTCGAAATCCGGATGATGCCCTGCGCGAGCATGACTGCCACCTGGCGCT
CGAGCTCGTCCTTCTGCAGCTGGGGGTACTGGTACGGGCGCACTGCAACA
GGCGCCGTGTCCGGCAGCAGGTGGATGCGGTGGTCACAGGGCCACGCGGG
TGGGAGGCCCTGTGGCTCGTCGAAGATGTCCCTGTGCTGCTGCAGGAGGT
CGGCCAGGAGCGGATGCGCCTCGTCAAGTGCGACCGCCATCAACTGAAGC
TGCGGGGTCGCGGCGCCGGAGCCGCCGATGCCTGTCCACTGAACGCGATG
CCCCCCCCCGCGCGCCAGAAGATGAGGGACAGCACGTCAAGGTCCCAAAG
GATGGGGCCTAGTGTGGACAGGAAATCGATGCCGAGGATGAAGTCGTAGC
AGCCCAGGTCGATGCCGACGCAGTTGATGGAGAAGGGCTCGTCGCCGATG
AGGACGGGAACCTGCCGCGCCACGCCGTGACAAGTAAGGCAGTCCCCGTT
GGCGACGGTGACGCTGAACTTCTCCGCGCCCGCCGGCTGAAGTGCGAGGC
GGCGCATGGCGTCCCTGGACAGGAAGTTGTGCGTCGAGCCCGTGTCCACG
AGCGCGGTGAGACGCTCCCCGTTGATCGTCACCGGAAGCAGCATCGTCTT
CGCCGTCTTGATGCCTGCCAAGGCATGAAGGGAGACGACGAAGGCGGTCG
CATCGACCGGCCCGTAGGTCGTGACACCGGCCTCGGAGAGTGTGGTGGTG
TCGAGCTCCGCGGTGAGGGCCTCTACCTCCGCGTCATCGACGGTCTCCAA
GTAGAACAGGCGGGCGCACGTATGACCCGACGCATACGGCTCGTCGCAGT
TGAAGCACAGGCCCTTGCGGCGCCGCTCGAGCTGCTCGGCTGACGTCAAG
CGCCGGAAGGTACGCGTCGGCGCGGGGGCGGCGGCAGTAGCGGCCGGCAG
ATCAGGGCGCGTCGGGGTGGCGGCCGCCGGTGCGGGGCGGGTCGGGGGGC
GCGCGCCGCGGCCTGGGAACGCCTGCTGCATGGCGTTGGCGCGCTGCTTG
TACGCGCACGCGTAGTACATGGCCGTCTGCAGGTCCTAGGGGTCGCGCAT
CTCGACGTCGACGCGGATGTGGTCGGGGAGGCCGCCGACGAAGAGCTCGG
TGCGCTGGCGAGCCGTGACGCCAGGCGTATGGCGCGCCAACGTCTGGAAG
CGGTCGGCGAAGTCCTGCACCGAGGTGGTGAAGGGGAGGCGACCGAGCTC
GGCCAGGCGGCTCCCACGTATGGAGGGGCCGAACCGGAGGAGGCATAGGT
CGAGAAAGCGCTCCCACGGAGGCATCCCGCCCTCGTCCTGCTCGAGGGCG
TAGTACCACGTCTGTGCGGCGCCACAGAGGTGGTAGGAGGCGATCCACGT
GCGGTCGGACGCCATGGTCCGCTGCCCCCGGAAAAACTGGTCGCACTGAT
TGAGCCAGTTCAGGGGGTCGACGGTTCCGTCGTAGGTGGCGAACTCCATC
TTGGTGAAACGAGGCGGCTGTTACGTGCGGCGAGGCCGTGTAGGCGCTCT
CGTGGCGACCCGTCGCGGTGGGAGGAGAGTACTGCGGCACCATGGAGCTC
CCGGCGTATGGGTCAGTATACCCGCCGAAGGTGGTGGCGGGCGGCGGCAG
CACCGTCGGCTGCGGCGGCGCCGACGTGTAGATCGGCGTGTCGATCCACT
TCGGCAGCGGGGACGGCGACGACGGGAACCTGATCTGGGTGATCGGGATT
CCCTGGGGCGCGGCGGTGGACGGTGGTGTTGGCGCGAAGGGCGCCGCCGG
CGGGGGCGGTGGCGCGTAGGGAGCCTGGAGGAAGGTCCGTAGGTTCGAGA
CCGCCAGGGTGAGGTCGCGGATCGCCGACGACATCTCCGCCGGAGAGAGG
ACGGTGGTCGCGTCGGCTGCCAGGGCCGCGGCGCCCGAGGCGGGCGGACC
CGAGGTGGCCGGCGGCGGCGTCTGCTGCGAGGTGGCGGTTGCCGCACCGG
TGGAGGCGGCAGCGGTGGTGGGAAGGCTGGAAGAACTCATCGAACCAGAG
CAATCTGATACCAAATTGGTAGAGGCTATGGTTCTACCAGATCTCGGACG
TAGATTATAGGGGTGGAAGTGAGGGCGGAGAGGCTGGAGGCGCAGACGCC
GGTGGCTGGGCGCCGTCGCTGCGAGAGGAAGGAGACGGCGACTAGGGTTT
GGGGCTCCCGTCTCCTGAGGGAGACCAACAGAATATGTTTATTGTCTTAT
TATAATCAAAGGGGTACATGCGTTTATATAGGAGGGCAGCTCCTCTAAAC
CCTAGATAACTTGGGCTAAGCCCCTAACTGGGCCTCTTTCGTGTATACTG
GAGCCCGACCATAACACTGGAGTTCTGTCATTCGGTGGCAAAGAAGTACT
ATATCAAAAGGGGAAAATATATAGAGTTGAAGAGGAAAGAATTTCCGACA
AAGGAAGATCTTATTACTTATTGCCGCCACATCAAAGTGATGGTGCGGTC
AACAAGTATATCCCAGTCGTCTATGCATTGCCAGGTGCACATAACCCAAG
GTTCATTACAGCAGCTGAATACTAGGATTACTGGGCACAAGCAAATACCA
GCAAATAGCCACAAATAAGATATGATTTCCAAAAGAAAACAAAACTATAA
AGCCGCACAGATCCTGCTACCGATCTTTATATTGAATCGCATCCAAAAGA
TAATCAGGGCTTTGCATCAGGATCTCGAGGGCGACAAGTGGATCACAGTG
GTGGCTGGACTGACCACCCTGATCCAGCTGTTCGTTGACCTTTGGGCCCT
GATCCAACACCCCGGCATTGACCCCTCCCAAGCTGACTGCATTCGTTGGA
ACACGATGAACACCAGCGAATATTCACACGCAACCCTTACAAAATGTTAG
AAAGCTGTGACCATGCCTAAGTGCAAGTTCTTCGCGTGGCTAGTGCCATG
ACAAAATCGTCATAGCCGAAAACCTTGCATCCAGCAGTCCTACAACTCCA
TTCGCTACTTGTTCCTTGCAAGCGATGACAGGTCCCTCTAACCGAAATTT
ACGGTTTTTTCATCTCCCACTATCCATTGGTAACATAATTTAGTAGCTTT
AGTGACCCATACTTAACACCCTTCTAAAAGGGAAATATATAATTTTCAGA
TCAAGTAAAGATATCCGGGTCATGCGTACTTAAACATTCATTTGGTAACT
AAATCTTGGTTACGTAATGGTACTTATCACCATCGTAGTTATCCCAGAGA
CAATGACCATCTGATAGAAAATAGCCTTGTTGGCAGAAAGCATGGAATAC
ATCCAGAATATTCAGAAGATTACATTTAGTTTTTACTTGTTCACAGTTTG
TTCATCTCCTCCTGTTAAGTAATATTTTTTAGTTTCTTGGCTTCTTTGCA
GAAGCTTCTTCGCTTTTTTCTCCTTCTCATGTTATGTCGCAACCTTTTTT
TATCCATCCCACTCCTATTTTTCTCTTTGAAGCAATGTCATCCAACTCCT
TATGTATTAACTTTAGTGATCTAAATTTCTTTTGACACAAACACCGATCT
TTTAATTTCCTGGGGGAGGTGATCCTTTTCTTTTATACTTTCCTAGAGAC
AATCAAATTGTGTATGTCATTAAAGGGTTTCAAGCGTCTCTATTCCTAAT
TAGCAACTGATGGATATGACCCAACTCCATATTTGAGTGTGCTTAGAATA
TTAGTTGTTTCCGTTTCATTCTCTGCTTTCTTTGTTCGACACACCGTTGT
CCTTTTCTGGAGGAGGGATGGTTTTTGGGTCCACACCCTTTTTTTTCTGG
TGGACTGCTGTCAAAGACATAAGGGCAATCAAATATCGAGGACTGTTGAT
ATGTCATTGTTTCTTGATATCATGATATGATGAGAACTGTTGATATGCCA
TTGTGTCTTTGGTAGCACTCTACGAGAAAGAAATCGATGCGCATCCAAAG
ACCCTCTCCCCTCCCCAAAAAGAAGAACAATAATGTGTCAAATAAATCAA
TTGGTGAAGGAACTGAAAACGATTAGTATTCTTTAAGCACGCTCAAATGG
TGAGTTGGATCGTATCCATTGGTTGCTGATTAGGGACAGAGAAACATGAA
ACCTTTTTAATGAGATGCATAAGATAGTATATATTTGGAGAAATATTTGA
TTGTTCATAGTTTGAATCTCTATGGCTTTCTGTATGCACGTCTGTCATCC
ATTTCTTGTTTTACTCCCTAGTCATGTTTCTGCTGTAGTAGCTATTTTGA
CCTTTTGCTTATAAGATGGTATTTCGGAGCAGCTGAAACTTAATTTATTG
TGTCCCTTGTGGTAGTTTACGAGCAGCTTCTCCGGAGCAGCGATGATTTT
GTGTGGCAAGTTGATGTGATGTCCCATGGGCGTTTTACGATTGACGTTGA
GTTCTTGGACCTGAGGATATCCACGAACAATGCAAGTATCATCTCTCATT
TCCCCTCCTATCAGCTGCAAATGATTCGTGGTTCATTTTCACAAATTTTA
CAGGGTACAAGTCCTGCCCGGGTAATATGTAGTATTGTAATGTGAGATTG
AAAACTAATGCGGTGACAGGTAACCGAACCATCTTCATCGATCTGGCCGA
ACGAAGGCATGGTGCAGAGCGTTGCTAGCAAGAGCACCCTGGGATGCCTC
TCCCGCATGCTCACGGAGTCCATCCACGCGGACGTGACCATAAACACGAC
GGACGGCGTCCTGAAGGCGCACAAGTCGGTGCTGGCGGCGTGCTCCCCCG
TGTTCGAGAGCATGTTCGTGCACGACCTCAAGGAGAAGGAGTCGTCGACG
GTCGACATCAGCGACATGTGCGTGGACTCCTGCTCGGCCCTCCTGGGCTT
CGTGTACGGGACGATCAGGCAGGAGCAGTTCTGGAAGCACCGCTTGTCGC
TGCTGGCCGCAGCGAACAAGTACGGCGTCGCGGACCTCAAGTCGTGCTGC
GAGGAGAGCCTCCTGGAGGACATCAGCTCGGGCAACGTGCTGGAGCGGCT
CCATGTGGCGTGGCTGTACCAGCTTGAGAAGCTGAAGAAAGGGTGTCTGA
CGTACCTTTTCGTGTTTGGGAAGATCTACGACGTGCGTGACGAGATCGGC
GGGTTCTTCCACCACGCGGACCGCGAGCTGACCCTGGAGATGTTCCAGGA
GGTGCTCAGCGTGTGGAAGCCCATCTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.