Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA016507

[Submit comment/correction]

Sequence	AA016507
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA016507
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GCCGCATCTCGCCTATCGCTCTCTCTCTGCCCCTCCTTGCGCTCGATCTT CACTCTCTTCGCATTCCCGTCGCCGCCGTTCTCCACCCGCCACCGCGCTT CCTCCCTCTCCCGTCCGGCGGCCCTACAAATCAACCGATTCACACCCAGC CGGCACCCCACCACACCGCTCTGCTCTGCCTCCTCACACAGAGCTGCTGC CCACACCGCCCCGCCGCCACGCAAAGCTCGAGCGCACTGATGGCGGCGGC GGCCATGTGAGAGGGTGAGGCGACGAGGCAGAAGAGGAAGAAGAAGAAGC CAAAGACGAACCATATGGAGTTCGCGGTGGCCTCCAAGCCCCTGCCGTCT GCCCCAATCCTTCAAACCCCAACTCAATCCCCTGCTCCCGGAACCCCAAT CCTGGAAGAGGCGGCGGCGAGGAGGAAGAAGAAGATGTGTAAGGCCGAGC AGAAGCTGCATCTTGCCGAAAAGCCCCAACCTTCAGCACAGCCCCACCTT CAATTGACTGTATCAGCCGAGGTAATTGTGCAGATCGGAAGTTTGCCATG AATCCCCTTTGTCTGCAAATACAGACCTGAAAACCATCAGTGCTATCTAC AGTTTTTCACTTGTTTATCTTCCCTTACCCACAACAGATGATTCTTCAAG AGGAGGTACTGTTGAAGCATCACCTGGGTTCAACTCAAGAGACCACTTCG GTTCCAGGTTAAAGATCATAACACATTTCTTCAAAAAAAAACTCATTAGT TAGCACTTGGAATGCCGTATATCTTTAGCATTCTGGTGCATTTGTGAACA TGGTGAAGTCATACAGCCAGAAAAAATTGAAAGGATTAGAAATGGTTAGC ATCAGAATAGCGCAAGGGTTGTTGTATATTGTATATTGCTGTATGCTGGA TAATAGAATCTAATCGCTTTTTTCCCTTCGTCGTTTCCTTCACTTTTCCT TTGTACCGCTTTGGCTCCATGCCAGTAATGCATTTTATCCACCACTCTTT AACCGAGTGTTCGGCAGCCCAAGCTTCCAGTTGGATTTTCTACAGCGCCA ACCAACATTTCACCGCCGACCAAATCCATGGCACAACCCTGCACTGAAAG AGAATGTGCGCCGCAGTCCCCCCCTCTGCTGCAAAGCTGACATAGGCCAC AGTTTGGGCAACCACTCTTTTGTAGGCGATTCACAGTCCATATCATATTT TATCGGATGTCCGCGACGGGGCATTGTAAGTGGCAGAGTGGCGTTGCTGC CACGATCCACTGAGATCCAGCCCCACGTCGCACGGATTCGTAGAAAAAAA AACAAAAAAAAAGTCCATATCATATAGCTGATCGCAAGCCAAGCAAAGCA TTTCAATTTTGGCTATGCCTATTTTTTCACACGGCCAGCTTCATAATGGA AAGTGTGGTATCGGCGAATTGATGCCGCCGAGTACTCTCCTGACGCCGAG AGTTTCCATGTGACGGAATCCGAGAGGTCATGATTTAGCACAATGCGCGA GAGTGGCAGGAGTGTAAACTTGCAGGGTTTCGTGATATCTTGTCATTTAT TTTCTGTTTTATAGTTGATTCTATACCCATTTTTTCTTCTTACACATGCA GCGGTGCCAATATCTATTAATTATCTAATGTCATTTTCTGTACATGAATA ATGCATGATAAGTATATATGAAAATTACTATTTGTAATACCTTGGACACT ATGCTCTAAGCAACAAGTCAGAATGAACCCAAAGTGCATAAGGTGTCCCA CTGTGGAGGCCCAAGAGCCACCCACATGTAGGCCCTGTCTAAGCGGAGCA GGGCACGGTACCGGCCAACCATCCTATCCACTTTGCAAGAACATCATATC AAGTGCGAGCAGCATAGCCGACAGGCATGCGAACAAAACATACACAAGTG TGTATGTCAATGACATACAACAGTACATCAGAGTCAGACCATCTAAAAGA AATAGAAATATTCAATGCCATACAGCAAGATCTAAATATCCTAGATAAAG ATAATATTTTAGGATACATCCTCATACATCACACATCAGAGTATCAAGTG GAAGCGGAGAACAAGATCCGAGTACGGATAAGAAGCAAATTGCCATAAGA TGCCCTGAAAAAAGCACTTCCCGCCGACAGATCTCACGAATCTTCAATCC CGGAATCTCTACATCTGATGGTCATTGCCACCATCGTCGGTCTTTTTGAC CCAGTAACCTTCCTGTGGATATACCTATCCATCTGAATAATATTTATCGT GTGAGACCCTAAGGGACTCAGGAAGTCTTTATGCATCTAAAGGGAACAAC CTGAGGGTGACACAACTGTATCGAAAGATAAAGCCTAGTAGTTCTATAGA GACACGCTACAACATCTGCCTAACGAAAGATAGACGAATGTTCGTTAAAT AAACAACAGTTAATTACCCAATAGATATATATCAACATAAATAAACATTG CTCGCCCTTCTTTCCATCTCCCGAACGAGAAGGCGGAAGAACATCCCATC CGTAGGCAATTTTATTAATCATTTCACGAGTATTGCACTATTTACTAGTC ATATTTAGTCAAATTAAAGACGGTACTTTAGTTATAGTTGTCTATGATCG AGAAACTGTGCTCCAAGTCGTCCATAACCGTGGACACGGCTTTCAAAAAG ATTTACCCAGCAGGGGTGCATAAATAGCAACACACGCACGATTAACCTTG AAAAAACCAAATAAAAACCAAACGAGGCATCATGACAAAGCATTCACAAT ATTCATAAGCGATTTCCGAGGGCCACCCCGCTAAGATACCTGCTACGAAG TCGGCCAGGCTCCGAGACGGGCCAAGGGGTTTGCGAGAACGGCTGTAAAC GACTGGAAACCGGAAAGTGTGACTGGGCTTGTTGATATCGTCAAATCGTG TCGCGATGCTAAACAGTACAGTAGTAAACGCTCTTCGAGCAACAGTAATA AATAAAGCAGTAAAGCATGGCATAAGTACAGTATAGTAATAACGCCCCAA ACTAGTTTGTGGCCCCAAGAAATAAAATATGAATCAAGCTCAGACTAAGG GGATTTATGGTCCCACATATGGATAGTGCGATAGTCAAGAAACAAAAATC AAGTACTTGGGGTCCTACGGGACACAAGTGAGCATAAAGAACCAAATAGC AGATATTGCCCACCGGTGCCTCTTTTTTTAGTTATCCCATTACTAAATTC AGTTGTTTAGGTACCTCGTTATTCAAGACTCTTCACAAACCCTACACATG CAATTCTACGACTCGCATGGCTCAAACAACTCCTGTAGTAATGGCTAATA GGATTGAGGAACAAGCTTTGGTAGGGTTTAAAAGTAAAGGCTATGCAGTA CTTGGAATTGCAATTTAATTCGTGACGCGATTCATGATGCAAGAATAAGA CATATGCAATAGGTACTATATGTAGTACAAGCATGGGGATTTGCTTGCCT GGCAACTCAGTCGATGGATAAGTGGGATCGGTTAATACTCCTGAAGCTCC TGATAGTTTCCTTGCTCGACATCTATCCCGATAAATACCAAACACACAAG GGCCATAATAAATATATTGCACAATCATATAAATCATATGCAACAAGCAA TCAAGGTATGCCATGATGGAATGATGCACAATTACATGGTATAACATAGC ATGACATGAGTGAGGTGTGGGGTACAAGAATAAAGCATTTTATTACTTGC TTAATCATATTTTGCTCCCATAAACCTTGCTACCCCTTTAATATTTATAT GATTCATGCTTCAATTCATATCATGGAATGCATAGTTAGAACGGGCTCAT TGTGCTAATCATTTTAGATATATCATTTGTCGAATTCGGAGTTACGAAAT TAAAGTTATGCATTTAATAAGAAATTGGCATTTATTAGCATTTAATTATT TCGAAATTTTAATTGCTCAAATGAAATTTTAAATAGCATATTCATAATCC TCATGTTTTTCTGATTCAAAAACATAAATCACACATATTATTTGGAATTA TAATTTTAAAACAATATAAATTCAAAATATTTAAAACATGGTTAAATGTT AAAGGTTTGACTAGTTTGAATTAGTTTTGAAAAGATTTGAATTTACAGTT GAATTCATATTTAAAAACTAAACACATTTTATATTAAACTTTTATTCAAA TTCAAATTTATTTGGAAGTTTGAATTATGTTTGTATTTAAACAAAATAAG AAAAAGATTTGAATTGGAATCTGGAAAATGGCCAGGGTTTTTGTTACATA GCTGCAACCTACTTTAGACACAGACGGGTGGGGTGATGTGCCTTTGCGGG TCCACACACGCGTCGACCAGCTGGGAGGCGACAAGTGGGTGAATCCAGGA CCGCGGGTTCAGTTTTAAAAAGGTGAGGTGTTGCGGTGCAAAAGTTCTGG TGGGGCTTAGCGGTGTGAGGCTGACGGGTGGGGTCAAAGGAGGGACACCG GGTTGATGAGTAAAAAAGGACAGGGGTTTATTGGTTAAATGTCCAGCGCT TCTCTGAAGCTACTGTTTTTCTCCCTTCTCTGAACCTAATGGACACGCGC GACAGAAAAGGTCAGAGCCTCGCGGGGGGTCGAACTGGAGACCAGAGGCA CGGCCTGGACGGCGGTACCACTGCGGTGGATGCTGGTGTTCGCTAGGAAG GGTTTTGGGGGCTGGATACGATGCAGGGACTCGCCTTCGTCTACCTCGAG CGTGGCAAAGACACGGTTCAACACAGGCGCATCGGACGGCGTGGCCATGT GGCTCCCAGAGGCTAGCAAGGGGTCTAGCTGGTGCGGCACGACGAGGCGA CCTCAACAGCACTAGCGGGCGGCAACGAGGCAGCTCACAGCGACGGCGCG GCAGCAGTCAGCGGTGGCGCGCGCAAAGCGCTCGACGAAAGGGAAACACA AGCCAGGAAGCCATCCAACAGGGAAACATGTCTAGGGGGCTTAGGGTCTC ACCGCGGGCCTGATGGTGTGCTCGAAAGGGCGCGGGGTGACGACGTTCAG CGACGAGGCTCGATGCTTAGAGCTAGGGTTTCCGGCTAGGGCTCGCAGGT TTAGCTTGTTCCAGGGCGCGCCTCCTTCGTCTCCGTGTACTGGCGGGATA TCCTGGTCCTGGCGGTCTTCCCCAGCACCTTGGCTTCCTCTCCTCTTCCT CTTCGTCGGATCAACCACACACCGAAGCTAGCGGCTATGGTGGTTGGTAG GCTAGCAGGGGAGACAGGGGAGGAAGGGAGGCTCAGGCAGAGCCCAAGGA TGCGATCTGGACGGCAAGGAGCGGTGGCATGGCTAGATAAGGACAGGGAA AGCTTGGGTTGGTGCTTGGGGTTAGGGTTTTGTTGCTCCTCTCTCTCTTG GTGGACGGCGGGGGTGGGGGGTTAACCAGGGTTAGGGTAGTGGTCCAGGT GAGCTTGACAAACAAGATGATGAGGGAGGTGGGGCTAGCTAGGAAGGGAA AGGTGGAGCATGGCACATGGGCATGCGCCATGGAGTGGCCTCGGGTTGGG GTGGTTGGGTAGAGGGGTAGTGGTTAGGGGGTGGCTTGGCTTGGTTTGGT GCAACCAAACCGAGAGGGAAAAGGGGGTAGGCTAGAGTTTAAGTTAGAGA GAGAGTAGTTAGGTTAGATAGTTTCTATTTGAATTTATTTGGTTTGCTTT TATTTGAAACAAGCTAAAATGAGCTTCCAAAAGAACAACAAAAACAAGCA ATTCCAAAAAGAACATGGATGGTAAATGGACGATATATGGAGGTTGGATT TGAATGTGCTCCACTAGTTTGATTCCTATTCAAACAAGTTTCTCACAAAA AAAACAAAAGAAACATAATAGGAAGGAGATGGTGGCATGCTTTGCGTGGG CCGTGCATGTGGAATAAATGACACACTTATAATTGTAAATACAACTATAA TTCCATATGGTCACATATCCATGAATGCATAACATTTATTTGAGTTGTGG ATCAACAAAAGAAAAGAGCTTGCTTGTCATATGGGAATAACCAACATATG CACATAAATGAATCCAAATGGCCGAATAGTGTGTATTTTCTCACTAGATC AACTTGTAGCCAAAATAGCATCATACATGAGCATATAATGAATAAAACCA TATGGAAGCTTAATAGAGGGGATTCTACCCACATGGCATGCAAAGGAGGC CATGAGGCTCCTCATACTTATTATTGTGAAAACAATTGATAACATATATG GGAGCATATAGATTTAGAAGTGGATCCATCTTTGTACATATGAGCTAGAC AAATACCAAAATAAATGCAAGTGCTCATATATAGTTTGGATGGTGGAACT ATAAGGTGGTGACAAGGAAGGTGGTGAAAATGCAAAAGACATGCCCACAA CTCAACTTGGGCATTAATCAATTTATCAAGAAGCAAATACAATATATCAA GAGGCAAATACAAGTAATACAATATAATGCATATGGGATAAGAACCAAAT AAGAGGGGTTTTATATGATGCTCAAATGCAAGGTGGCATGGTGACATGAG CATGATATAATGATGATGCAATGAATGACATGTAGGAAGTAACATTTTAT TATTATTCATGTAGCATTACATATGTTAGACAGATGGGATGCTACACTAG TTGACATGTGAATCTTTATCTCACCAATCCCCATGATGATTAGCTGATAT CAACCCCATGCTTATTTATCTACTTATTACTGACCTTTGCCTTTGTTTCT TTATTAATATAGGGCATGCGATGAAGCCTGTTAGACATGAAACACCCCAA GCAGAGGATCAGGGGGAGGGGGGTGTGCTGGCGAAGAAGACGCACAAGGA GCACAAGTCATCTCCTTCTCTGTCCACTGCCGAAATCCCAATCTTGCAGC AGGAGGCGAAGGTGACCAATAAACGGAAGCGTAGGAAGCAGAAGGACCCA TCTAGCAACTTTCCTTTGCCACTTGACCCTGGGCAGGCTCAACCACAAGG AACAAATGCTCCCCATGCCTCCAAGCCTCTACCCGCTGCCCCATTCCATG AAGCCCCAGCTCAATCCCCGGCTCCAATGTTGGAAGAGGTGGAGGCGGAG GTGGCAATGGGGAAGAGGAAGATGCGTATGGAGCAGAAGGTAGCGACACT GCCTCTTGCCCAAAACCCTACCTCAGAGGGGCAGGCGGAGGAGTGCGTTC TAGCAACGACGATGACGAAAAAGAAGAACAAAAAGAGCAACAAGACATCT CTTTCTCTATTCGCTGCTGCCGCTGCCGAAATCCCAATCCTGGAGCAGGA GGTGAAGGTCACCAAGAAACGGAAGACGAGTAAAGAGCAGGAGTCATCCA GCTACTTGTCACTGCCACTTGACCTCGGGCAGACTCAACCACAAGGAACA AATGCTCCCCATGCCTCCAAGCCTCTACCCGCTGCCCCATTCCTTGAAGC CCCAGCTCAATCCCCGACTCTAATGTTGGAAGGGGTGGAGGCAGAGGTGG CAATGGGGAAGAGGAAGATGCATACGGAGAAGAAGGTGGTGGCGCTGCCT CTTGCCCAAAACCCTACCTCAGAGTGGCAGGCGGAGGAGCGTGTTCTAGC GACAAAGAAGAAGCACAAGGAGTGCAACAAGACATCTCTTTCTCTATTCG CTGCTGCCGCTGCCGAAATCCCAATCTTGGATCAGGAGGCGAAGGTGACC AAAAAACGGAAGACGAGTAAGGAGAAGGAGCCATCCGGCTACTCGCCACT GCCACTTGATCTCGGGCAGACTCAACCACAAGGAACAAATGCTCCCCATG CCTCCAAGCCTCTACCCGTTGCCTCATTCCTTGAAGCCCCAGCGAGATCC TTGGCTCCAATGTTGGAAGAGGTGGAGGCGGAGGTGGCGATGGGGAAGAG GAAGATGCGTATGGAGCAGAAGGTGGCGGCGCTGCCTCTTGCCCAAAACT CTACCTCAGAGGGACAGGCGGAGGAGCGTGTTCTTGCGACGACGACGACA ACGAAGAAGAAGAAGCACAAGGAGCGCAACAAGACACCTCTTTCTCTATT TGCTGCTGCCGCCGCTGCTGAAATCCCAATCTTGGAGCAGGAGGCGAAGG TGACAAAGAAACGGAAGTCGAGTAAGGAGCAGGATCCATCCGGCTACTTG CCACTGCCACTTGATCTAGGGCAGACTCAACCACAAGGAACAAATGCTCC CCATGCCTCCAAGCCTCTACCCGCTGCCCCATTCCTTGAGGCAGCCACGG ATGTGGTGATGAGGAAGAGGAAATTGCGTAAGGAGCAGAAGGTGGTGGCA CTGTCTCTTGCCCAAAATACTACCTTGGAGCAGAGGGAGGATGCCATGAT GGCTAAGATGAAGAAGCAGGAGGAGCGCAAGCCACCTCCTTCTACATCCG TGGCTGCCGAAACCACAATTTGGGAGCAGGAGGCAAAGGTGAACAAAAAA CAGAAGCAGAGGAAGCAGCAGGAACAATCTGGCGAGTCACCATTGCCACT TGACCCTGGCCAGACTCACTCACAAGGAGGCAAAGCTCCATTGGAACAAG AGCGAGAAGCTGATGGGCGAAAGGATAGCAGTACTAAAAAAAGTAATGGC AAAAGACCCCATGTCCGTGTCCTCAGCAAGCGTGAGCTCATCAAAGAGTC GAGCAAGAAGCAGCCGGTGCTACCCGAAGGCTTTGTGGCGTTCAGCGATT TTGTTCCGAGTTGCACCGAGCAGAACCCTGATCATCCACCGCCTTACATT GCATTCTTTGACCAGTTCCGCTATAAGCCTGTCCATGGTGATCACAACCC CCCACTTCCTAGGACCCCTGATCGTCTATCCAGGTTTACCGCAAATGAAA CCTACACGATTTGCAACTCCAACACCTCTATAGCATCCAAAACAAAGCAG CAAGATTTGGGTTTAGGCTCACAAGAGAAACAAAATGCACAAGTAAAGGA AAAGCCTCAGAAGAAGAAACAAAGGAAACAATCAGGTAATTCGCTGCCAA TTGACCCCACCCAGACTTGTTGCGTTCAAATACAAGGAACCCCAGAACAG GACGAAGAAGCTGATGCCCGAAAGGTTGACAATATTAAAAAAAGTAACGG CAATAAGCCCCGTGTCCGTGCTCCCAGCAAACATGAGCTTTTCAAGGAGC AGATGCTACCTGAGTTGTCTGAGCTCTCTGCGAATGGAACCTCCAAGGCT ACCAATTCTGTAGCTCGCAAACCAAAGAAGAAAGATTCATATCCAGGCTC CGCTTCTGGCTCACAGGAGAAACTACATGCAAACGAAAAGAAAAACCCTG AGAAGAAGCAAAGGAAACCACCACCGTTGCTTACCCGTGCTGAAAAGTGC TCAGATAAATACCGGCGCGTTCCCCTAGACCAGCTGATACCACCGCCACG CTCTCCTCATAATCTCTTGCAGGAGAAGTATGCTTCTGATCCATGGAAGG TTATTGTCATCTGCATGCTCCTCAACTTAACACAAGGTATACAGGTAAGC TACTAGATTGTTCGCTTAATACTTTTCCCCGATGAACTTTTGGAAACAAA CCATTTAACTGAATTTCTGCCAACTAATTTGATTGATGAGAGTTCTGATA GCTACGAAGATAAAAAAACTCTCATGTATTCTTCTAAGCTAATCATTGTT TCTACACATTCCATGCGTAAAAAGATGGATAACCATGTAATTTTTCTTGA TTAATAAGTCAACAAGATAACTGAAATTGAATTGTCAAGTGAATTTCAGT TTATGTGTACAAGGGGGATCTGCTGGTTCGTTTTGATGGTTCTCTGAAGA ACTATTTTGCTGCACAGGCAAGCTTAGCAGTTGCATGTTTTATGCTCTCA TTTTCTCATTGTGTGTCTTGTGTTGTTTGAGTGTAGCAATGAATTTAGAT TGGTCCATTTGTTTTTAGGAGATAGTTCCCTAACGCGTCAATTCCATTTT CCAGTTTGAGTTCAAGAATTCACTCCCCTCTTTTAACTAATGTAGGTCAA GAGGATTATTGAGGGGTTCTTTGAATGCTATCCTGATGCTCAATCTGCAT GTAATGCTGATCCTGACAAGATGGCGGGTTATCTGGCACCTCTAGGGTTG CAGCATGTAAAAACAACTAGAATCCAGAGATTCTCTAAGGAGTATGTTGA AAAAGAATGGACCTATATTACTGAGCTTTGTGGTGTTGGCAAGTGAGTTC TGCCCTCTTAATCCTTCTGTTGGATATGGAGTATTTATATAGTGGTGTTT CTTATTCAGCCTGATTAGTCACAAGAAAATTATTCTTACCACAGGTATGC AGCTGATGCTTACGCAATATTTTGTGCGGGTAGGGCAACAGAGGTGGTGC CTAAAGATCACAAGTTAGTTGATTACTGGAAGTACGTCTGCTTTGAGCTG CCCATGATGCAGGTAGTATTCTGGACACATGAGGTTTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.