Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA005025

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Sequence	AA005025
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA005025
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGAGAAAACCCAACATGGAGGACCGGTGGGGGAGGAGGTGAAGAGGCA GCTGTGGCTGGCCGGCCCGCTCATCGCCGGCAGCCTGATGCAAAACCTGA TCCAGATGATCTCCATTATGTTCGTCGGCCACCTCGGCGAGCTGCCCCTC GCCGGCGCCTCCATGGCAACGTCCTTCGCCACCGTCACCGGATTCAGCCT CATTGTACGTGGCATTTCTCATAGTCACAGCCCTTCTCAATCTTGATTGG TGGTTTTCCGCGTCACGTGTCATTTTTATCACATCTCCATCTTCGCGCCT TGTTGGTTAATTCCATTTCTACTAGTAGTATCCGGAAAAGTAAGGTGATT ATCCCTTAGAAAATCCAGGAACAAACAGGTGATTTTACCACTCGCTACTA TACATACTGGTGTGCGGATTCTTCCAAAGCGGCATTGTACCTTGCGTTCA TGCTTTTATATTTTGAAAAGAAATAGTTAAACTCATCTACAGCAGATACC TTCTAGACTAGACTGTTGTGATGTGCTGCTTCTTTCCTCCATGTGAGAAT ATTGACCACGATTTGGGCCAACTATAAATAGAGACAAGATTATAATACTA GCCATAACTATTACAATCAATGTCATAACTATTGATCAATGCCGTAACTA GTCATTATTGTGAAGAACACAACAAATACGGAAACTCCAATATGGGGATA TGTCACGTTGTCTAACACACCCCCGCAATCACAACGGGAGGAGGACGGAC GTTGAGACTGGACCGTAAGTCCAGAAACAACGGTGATGGAAGACTCTTCG TCAAGATGTCGGCGAACTGGCGAGATGAGGGTACATGGAGCACGCGGACC TGGCCCATGACAACACGATCGCGAACAAAGTGGAGGTCGATCTCGATGTG TTTGGTGCGCTTATACTGGACGGGGTTTGTGGACATGTAGACGGCGCTAC ATTGTCACAGAACATAACTGTGACGGGAGGAGTTGGTCGATGAAGCTTGT GGAGTTGGCGAATCCAACTGGCCTCAGCAATGGCGTTAGCCACAACACGG TATTCAGCCTGAGCGCTAGAACGAGATACTGTGTGTTGTCTCTTCGAAGA CCATGAGACAAGGTTGTCACCGAGGTAGACGCAAAATCCCGACGTAGAGC GTCGAGTGTCGGGGAAGCTGGCCTAGTCGGCATTGGTGTAGGTGACCATG GAGTCTTGCAATGACGAGTGAAGCTGGAGTCCATGAGAAAGCATGCCCTT GGCATAACGCAAGATGCACTTGATGGCCGCCAGGTGCTGCTCACGAGGGT CGTGCATATGAAGGCACACCTGCTGTATAGCGTATGCGATGTCATGGCGC GTGAAGGTGAGGTACTAAAGAGCACCGACGAGACTCCAGTACTCAGTCCG GTCAGTGACAGGAGCATCGGCGGTGGCGGGGGGCTTCGGTGACGTGTCAA CCGGCGTTGTCACGGACTTGCAAGAAGTCATGTCAGCTTTGTCTAGAATC TTCGCGACGTACTTGGCTTGCGAGAGATGCATGCCAGAGGAGTCGCGAGT GACCGCGATGCCGAGGAAGTAGTGAAGGCATCCCATGTCCATCATGGCGA ACTTGGAGCAGAGAGAGGCCGTGATCCTATCGAGTAGGCGTGGTGAGGAA CCAGTGAGGACGATGTCATCCACGTAGAGAAGGAGGAAGTACGTACCCTT TGTACACTAAAGAACAAACATCAAGGTGTCCGAGCGTGAACACGTGAAGC CGGTTGAGGTGATTAAGGTCGCGAAATGCTGCTACCACGTGCGAGGAGCC TGCTTGAGACCGTATAGCAAACGGTTCAACCAACAGACGTGCTCACAGCG GGTGGAGTCGTGGAAGCATGTGGGTTGTCGACAGTAGACGGCCTCGGCGA GCTTGCCATGGAGGAAAGCGTTCTTGACGTCGATCTGGTGAGTCTCCAAT TTAAGGGAGAGCGCGAGGGAAAGGATGACGTGGACCGTTGCCGGTTTGAA AACCGGGCTGAACGTCTCGTCAAAGTCGACACCTTGCTCCTGGGAGAAGC TGCGAAGCGCCCAACATACTTTGTAGCGGTCGAGGGAGCCATCGGTCTTG AGCTTGTGGTGAAAGACCCACTTGCGAGAGAAGATGTTGGCGTTACAAGG AGGAGGCACGAGATCCCAAGTGCCATTTCCGAGAAGAGAGTGGTACTCCG CGGTCATGGCATCGAGCCAGTTGGGATCATTGAGAGCAGCACGAGCAGAG GTAGGAATCAATGAATATCTGTTGACACAAACATAGAAGTTAAGCCGCTC ATGGGGTCCGAATGGATGCTGGAGGAGCTGCGTGTGCGGTGCATAGGCGG CAGCGGTGGTGGAGGCGATGGTGCAGGTAGCAAGGAAGGTGGGGAGGGGG CGCACTGCGAGGGAGGTGGAAAGGGGGCGCGCGGCACAAGTGGTGCTGGA GGAACGACAATAGGAGGAGAGTCATCGTCAAGAAAGGCGTAGGTGGCAGG GGAGGGTTGCTGCGGTAAAGCAGAGGGAAAAGCGGACTCGTCAAAAATAA CGTGGCGAGAGATGATAATGCGGTGACTGGTAAGATCCATGCAGCAATAA CCTTTGTGGTGGGGAGAATGACCAAGGAAAATGCAAAAGCTAGACCATAG GGCAAGTTTATGAGGCATAGTGGAGGTGGTATTAGGATAACAAAGACAAC CAAAAACACGTAGGGACCTGTAGTCAGGATGACTATGATGAAGAGTAAAG TAGGGAGATGGAGAGGTGATGGTTTTGGTGGGAAAACAATTGAGGATGTG AGTGGCGTAAGTGAGAACTTCTATCCAAAAGCGAGGTGCTAAATTAGCAT GAAATACGAGAGATCGCACTATGTCGTTAACAATACGAATGGTATAGTCG TATACCTAGGAACAGTCCATAGAAAATGAGTAAAATCATCAAGAATATCT AGGAAATATTTATTACTAGAAATACTATAAATTGGTAATGTCCAAAGATC ACAATGAACTGGACCAGATGTACAAAAACAACGATGATGGAAGACCCTTC GCCAAGATGTTGGCGAACTGGTGAGACGAGGGTATCGATCGTTGTAGGTT TTGGCAGAAGCGGTGGTCTCGTTGGAGACACCGAGTACGTGTTTATATTA GGCGTGAAGAGCCCTCCCCGTGGCTTGTACATGAGGTAGTTCGATCCTGG AACGATCGTTACAAAGGATAAGAGATAAGAGGTAATCTCCTCTTTCCTAA CTTAAACAGAAATAATCTCCTATCTATCTAGAACAGTTGGAGTACTACTC CAACTTATCGTTACATGTTACAAGTCATATTGCATGAAGTCTAATAGCCT CCCTTAATCACAACCTTCTGAAAGGTTGAGATTATGCTTGAATTCATTCA GATCTTTAACTGCTAAAGCTTTTGTAAAACCATCTGCAACTTGATCTTTG CTTGATATGAACCTAATGTCAAGCATTTTGTTTGCAACTCTTTCTCGAAC AAAATGATAATCTATCTCAATGTGTTTTGTTCTGGCATGAAACACAGGAT TTGCAGACAAATATGTAGCTCCTAAATTATCACACCATAGACATGGCTTT ACCTTTAGTTCAACACCAAGCTCACCAAGTAAAGCTTCAACCCATATCAG TTCAACAGTAGCATTAGCTAAGGCTTTATATTCAGCTTCAGTGCCAGATC TTGAAATTGTTTGCTGTTTTCTTGCACTCCATGAAATCAAGTTTGGTCCA AAAAAAACAGAAAATCCTCTTGTAGATCTTCTATCATCCAGGCAACCTGC CCAATCTGCATCTGAGAAGGCACTAAGCAAGCTAGATGAAGACTGCTGAA AAGTTAGCCCAACATGTATAATCCCTTGAACATATCTTAAGATTCTTTTT GCAGCTGTCCAATGAGCAGTAGTTGGAGCATGTAAATATTGACATACTTT ATTGACTGAGAAAGAGATGTCAGGCCTTGTGAGTGTTAAATATTGTAAGG CACCTACAATGCTTCTATATTGTGTATTATCATCAGGACCAAGAGTTGTT CCTTCAGTCAGGGATAATTTTTCAGTAGATGATAAGGGTGTAGTAGAAAT TGTGCACTTTGTCATACCAACTTTTGCTAGAAAATCAGCAGCATATTTTT CTTGAGTGAGAAGCAAGCCATTCGAAGTTTTCTTTACCTCAATCCCCCAA GAATAAGTGCAATTCTCCCAAATCCTTAAGTGCAAAATCAGTGTTTAGAT CATTAAGAAGAGCAGAAATAGCCCGATCAGATGAACTAGTGACTATGATA TCATCAACATATATTAGAACAAATATCATAACTTTTGCTTTGTTATAGAG AAAAAGTGAAGTATCTGCTTTAGAAGGAATAAAACCAAGTTGTTGCAACT TGGTACTGAGTCTTGAGTACCATGCTCTCGGGGCTTGCTTAAGACCATAA AGAGCTTTATCAAGTTTGCAGATATAGTTTGGAGTAGCAGTAGACTCAAA ACCTGGGGGTAGTTTCATATAGACCTCCTCTTCCAGAACGCCATGAAAAA ACGCGTTCTTGACATCTAGCTACCACAGACTCCAGCCTCTAGAGACAGCC ACTGCCAATACTAATGTAATAGTTGCTGCCTTGACAACGGGACTAAAGGT ATCTTCATAATCTATGCCATATCTTTGCTTGAATCTTTTTGCTACCAAGC GTGACTTGTACCTGTCAATTGTACCATCTGCATGTTTCTTAATACGATAT ACCCACTTACAATCAATAAGATTCTTTGTGGAGTGTGGAGGAAGAAGATG CCATGTTTTGTTTTGTATTAGTGCATTGTATTCTTCCTCCATCGCCTTGT GCCAACGATCTTCCCCAAAAGCCTCCGAAATAGTTTGCGGTTCACCTGTA GATGTGAACAAGCCATAGCGGACGGTACCATCAGTATACTGTTTTGGATT TCGTATACCTTTCGAAGCCTAGTGCGAGGTTCCAGGGGGGAGGATTTAGT GGTGCAGGCAGAGGTGTAGTAGAGCCAGCCACAGAGGATCCTTCAGCTGG AGCAGTACCAGATATGGGCTCAGGAGGGGAAGATTATTCCCTGGCGTCGT GCAGTGAGACGGGTGAACGCACCCTGGGGCCTCGCGAACGCGACCTGACG CCTGAGCGCGACGCGTCCCTAGCGTGAGCAGGCGGGATAGGGGACCTCGA ACTAGGACCCCGCGACCGGGACACGGGTGAAGGCGACGTGAAGGCGACGC GAGCGTGGACATGACGCAGTCCACCCAGGGGACAGCGACCGCGAGTCAGC CTGTGGGCCCTGGAGCGATGCACGCCCACGCAGGGGCGGGACCAGGGCGA CATAGAGTGTTGGCGCATGGGCGAGGCCGATCTTGATCGCGACGTGTCGA AGAAGGGTTGGCGTACGGGCGAAGCAGAACGTGATGGCGACGCCCGCGGT GGGGACACGCGCGGTAAATCCTCCGGCCGTACGGGGGACCGCGGTGGGGA CGCGCGCGGGAAGCCCGCCTGTCGTACGGGAGAATCATCCGCGGGATCAG CGCCCGTGCGTTCCAATGCCGTGGCGCGGAGATCTTTCTCGGTGCATCTG CCCAGGGTGAAATCTTCCGAGACATATTTCTCCACTATTTCTTCAGGATT TTGAGTGAAATTTTCTGCAGTCTCTTGCTGATCATCAGTAGTACGTGCTG GAGTATTGTAGTCTCCAACATCTTGATGCTCATTAGTAACAACAGGTACA ACAGGCAAAGGCATATAATCATCAACGGTTTCAACCCCATGATGTGATGT GTCTTGAGGTAAAAGAAGTATTTCATTCCGGAGACGTGAGCTAGCATTAG GATGCAACTCAGCAAAGGGAAAGACGTTTTCATCAAAAACAACATCTCTG GAGATATAAACTCGACCAGTGGAAATGTCTAGACACTTGACACCTTTGTG GCGAGGACTATAGCCCAAGAACACACACCGTGTAGAACGAAAAGAAAGTT TTCTTTTATTGTAGGGGCGGAGGTTTGGCCAACACGCACAACCAAAAACT CTAAGAGATTCATAGTTGGGTTTTGTGTGAAGAAGACGTTCTACATGAGT GTCATGATTTATAACTTTGCTTAGGGGAGATTGATAAGAAAAGTGGCAGT GAGGAAAGCATCATACCAAAATTTAAGAGGCATAGATGAATTTGCAAGTA AGGCAAGACCAACTTCGACAATATGAGGATGTTTTCTTTCAGCGGAGCCA TTTTGTTGATGAGCATGAGGGCAAGATACATGATGAGTGATGCCAATCTT TTGGAAGAAACTATTGAGCTTTTCATATTCACCTCCCCAATCGGTTTGCA TGGTGATTATTTTCCTAGCAAATTTTCTTTCAACAAGTTGCTGAAAATTA AGGAAAACTTGGTAAACATCAGAGTGTTTCTTGAGCAAATAGATCCAAGT AAATTTATTGAAATCATTAATAAAACTCACATAATATGAATGTTTACTAG AAGAAATATGGGTTGGACCCCATACATCAGAGAATACTTGTTCTAAAGGA ACAGTGGATATACTAGTAGAGACAGGATATGGCAATTGATGGCTCTTAGC TAGTTGGCAAGGATCACAAATGTATGGGTTTATTTCAGGAGTGTAAGAAA TACTGTTTTTCCTAAGTACTTGTTGAACCACAAAGGAAGAAGGGTGTCCT AAACGGCGATGCCATGTAGAAGACGACGGCTTTATTGTGATGAAGACTTG CTTGGAAGAACCCGTAGTAGAAATAACTAGCGGGTAGACACCATCTTGAC ATGGTACTTTAAACAGAGTTCTCCTTGTGGCCTGATCCTTGATCAAAAAG AAATATGGGTGAAACTCAAGAAACACATCATTATGTAGTGTGAGCTTATG AACAGACAGAAGATTCTTAGATGCACTAGGAACATGCAGAATATTTTTGA GTTGTAAGGTATTACATGGGGTGCATAAAGTTGAATGACCAATATGAATT ATTTGCATACCGTTTCCATTGGTCGTGTGGACATGATCACGGTCGTTGTA CTTTTCATGAGTGGTGAGCTTGTTCAACTCTGAGGTGACATGGTGGGTAG CACTTGAATCAGGGTACCAGTTGGTGTTGACGCCATAGGATGCAACATGG GCACCCTTCTCCTCTCCATCATCCTTGGAGTCATGGAGATCTTGGTAGCG CCATCAGCACTCGTTGGCGGGGTGGTCGTGGATCTTGCAGATTTGACACG TGACGTCGACGAAGGGGGTAGGAGCACGTCCACGACAACGCCCTCCATCA TCTCGGTGTCGACCTCCATCATCACGACGGCAGCCACCACCATCATCGCA ACAACCGTCGCGTCCATCATCACGCTGTCGATCTCGACGGCCTCCATCAT CATCACGCCGCCCGTCACGGCGGCCTCCATCATGGGTGCCATCACGGCGC TCGCCTCCACCACGAGATGAGATGGTGGGATACATCCTCAATGGCCTCGA CACCAGCTACAACGACCTCGTCTCCTCCGTCAACGGCAATCCTGGTACTA CTCTCGATGATCTTTATAGTCAACTTTGTGCTCATGACCTTCGGCAAGAT ATGCTAGCAGACTCTGGACATTTGGTGATCTACCGCGGTCTCCGCGAGGG CGGAAGTCACGGTTGCTATCATGTGTAGGTCGTGCAACAAGGTTGGCAGA GGAGGTGAATCTAGCACCCTGTCTAGAATCTGCTAGCATATCTTGCCGAA GGTCGTGAGCACAAAGTTGACTATAAAGATCATCGAGAGTAGTACCAGGA TTGCCGTTGACGGAAGAGCCGAGGTCGTTGTAGCGAGGCCGTTGAGGATG TATCCCACCATCTCATCTTCTTCCACGGGTTTGCCCGCGGCAGCGAGTTC AGAACCGAAGCTTTTCATCTTGGCAAAGAACTGTGCCGCGGACATGTCGA GCTTCTTGGTGTTGTTCAATGACCCCCGCAGGTGATTGATCTTGGTGCGG GAGTGGGATGAGAACATGCCGGTGAGGGTAGACCATACCTCAGCAGCGGT GTCAATCCCGACGACATGAGGGATCATCTCTGCAGACAGGGAGTTCACGA GGAACCCGAGCACCGTTTGGTCCCGAGACAACCATGCCGTGTAGGCAGGA TTGGGGATGATGGTCTTCTTTTTGTTGGCGTCTTCAACCTCCAAAGTCTT CACCGGCGCGGCGTCGGTACCATCGAGCAAGTCGAGGACCTGAGCACCAC GAAGCGGGGGTAGGACAAGGGTCTTCCAGAAGAGGAAGTTAGCCCGAGTC ATTTTTTGGGAGGTCGGTGATCCCAGCGCGGCGGAGAGAACGGACGACGA TGATGATCCAGAGGTCGTCATGGCCACCAGAGGGATTGTATCTTGGATCT CTTGGGCTTAATTGGTTTTGTTGTGGTTTTTGGTTTGTGGGGAAGCAGCG GCGGCAAGGGGATGCAGCAGCGGCGAGCTTGGGCGTGTGCAGCGGCAGCA AGGAGATGCGGCGACGCAGGTGTAGGTCGTTTTTGGTTTGTGGGGGAGCA GCGGCGGCAAGGGGATGCAGCAGCGGCGAGCTTGGGCGTGTGCAGCGGCA GCAAGGAGATGCGGCGGCGCAGGTGTAGGTCATGGGGTTTTTTGTAGATC GGTTTGCGGCAGCAGGGTCACGGAAAAGGCTGCTCTGATACCATATCGAT CGTTGTAGGTTTTGGCAGAAGCGTTGGTCTCGTTGGAGACACCGACTACG TGTTTATATTAGACGAGAAGAGCCCTCTCCGTGGCTTGTACAGGAGGTAG ATCGATCCTTGAACGATCGTTACAAAGGATAAGAGATAAGAGGCAACCTC CTCTTTCCTAACTTAAACAGAAATAATCTATCTAGAACAGTTGGAGTACT ACTTCAACTTATTGTTACATGTTACAAGCCATATTGCATGAAGTCTAATA GAGGGTACATAGAGCACGCGGACCTGGCCCATGCCAACACGATCGCAACG AAGTGGAGGTTGATATCGATGTGTTTGGTGCGCTGATGCTGGACGGGTTC GTAAACATTAGACGGTGCTACATTATCACAGAACACAACTGTGATAGGAG GAGATGGTCGATGAAAGAGTTAGTTATGGCATTGATCAATCGCAATGACA TTGATTGTAATAGTTATGGCTAGGATTGTAATCTTATCTATTTATGAAGG TGCAATGGGATGGCCTAAACGGTGGTCAATATTCTCACATGGTATCAGCC AAAACTTCCTGAAAATCGCTTATGCTCCTCCTCTCCTTCCTAGTCACCGC GGCCTACGGACCATGGTTTGCCGCACCTCCTACTCTCCTCCTCCCATGGC GCCGCCCGAACCAGTCGCGCATCACCCCAACGCCCACCTTTGGGCGCAGG ACACCGACATCCAGAGCGTTCGCCCGTTCGTCCTGGCCGTCCTCGACTTT AAGACCAACGTGTTCCCCAAATGGCACACCTTGTTCACCATCGCCATCAC CACCTACGCCCTCGAGGACCACTAAGACGCCTCCTACTAGCGACACCACG TGGCTCCGCCTCGACTTCACAGTCCTTCAGTGGATCTATGGCTCCATGGA CATGCATATCGTCGACCTCGCCATGCCCACATTGACCTTGGCCAACGCCC CTGCCGCTACTACGTACACAGTTTGGACGGCTGTCCACGGCCTCTTCAAC GACAACAAGAAGACCCACCAGGTTTACCTTGCCAAGGAATTTCGCAACGT CAAGCAAGAGGGCCTCTACATCACCGAGTACCTACAGCTCCAGAAGGCAG CATCCCGGTCTATGTCTCGGACCTCGTCACCAACGTCATCAAGGGTCTCG GTGATCAAGGTTTGATAGCATTGCCGACATCGCCCCTCTCCTCACGCCGT TCCCCACCTTATTCAACTTCCGCAACATGCTGCTCCTCCAGGAGATGAAG ATGATGTGTCGCTCCCCGAACACCTCCGCCTCGGCCTTCATCACCCGGGG GGCAGCCCCTCCTCCACCTAGCGGCGGCCCCCTGCCGGGCCGAGTGCCGG ACAGCCATGGCGCCCTCCCACGCCGGCTGGCATGGCTGGTTTTCTTTACT CCTTGGTCAGGTTAGCATGATGGTTTCCTTGTTTTTTCTTTTCTCCTAAT CAGGCTGGCATGGCTGGTGCTCTAGACACGCTATGCGGGCAAGCATTTGG CGCCAGGGAATACCACCTCCTCGGCATCTACAAGCAACGAGCCATGCTAC TACTCACCCTCGTATGCATCCCTGTGGCCGTCCTATGGTACAACACCGGC GAGATCCTCCTCCTATTCGGCCAGGACCCCGACATCGCCATGGAGGCCGG CACCTATGCCCGATGGATGATTCCAGGGCTCTTCGCCTATGGAGTATTGC AGTGCCACGTCCGGTTCCTTCAGTCGCAGAACATGGCGCTCCCAGTGATG GCGAGCGCCGGTGCGGCCGCTCTGTTCCATCTTCTCGCCTGCTGGCTGCT CGTGCACGCCGCCGGGATGGGCGGCAAGGGCGCGGCTCTTAGCAACGCCG TCTCCTACTGGGTCTACGTGATCTTACTGGCCGTGTACGTGAGGACATCG AGCTCTTGCGAGAAGACGTGGACGGGGTTCTCCACGGAAGCCTTCTGTGG CGCGCGCGAATTCTTCAGGCTCTCCGTGCCGTCTGCTCTCATGCTCTGGT GAGTCATATTTAGTGTGTTGTGAACCACTGATCGTCGATTATTGATGTCT TAATCATATTTAAATTGCATTTGCAGCTTGGAGTGGTGGTCATTCGAAAT CCTCGTATTGCTTTCAGGGCTTCTTCCCAACCCCAAGCTGGAAACATCCG TCTTGTCGATC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.