Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA001028

[Submit comment/correction]

Sequence	AA001028
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA001028
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CAGCCATTCAAGGCCATCCCACTCGTCGGTACGTATGCTATCCGCCGATC GAGCTTCATCTATTCCACTACTGGCTGTCTTTTACTCCTACCTCAAAATG CCATTGTCCAGCTTCAGCAAACTTTTTACCTGAAACAAGTGACCATGGCC ATTTTATCTCCTTGCAATTGCAATGACGACCAGATATCGGCCCGCTGGTG GAGAAGATCGACGACCCAGGCATGGCCGGCGACGGGGACCTGCTGCGCGT CGTCCGGATGCTCGACGCCGCCTGCAAGGAGGCTGGCTTCTTCTACGTGG TAAACATACACCATCACCCACTCGTCAACCTAACTACTACTACTATTACT GGTTCATCTCAACTAATAATGCTGGACAATTCATCCATCACGCGCATTGT TAACAGAAAGGCCACGGGATCACGGAGTCGATGATTGTGGAGGTCAGGGA TGTCACCCGCAGGTTCTTCCAGCTCCCTCTCGAGGAAAAACGAAAGATCA GACTCACACCTCACACTGGATATAGGTGTGGCTAGCTGCTTAGCATTTTC AACCTGTCATGTCTTCTTCATTTTGTTTCCTCGATCGTAGGCATGACACA TGAACTTGATTTCTTATCGTATGACAGAGGATATCAGACACTGGGCGAAA ACATCACCAAGGGTAAGATTAATATGCAGGAAGCGATCGATGTAAGTTCA CCTCGGCCATCTCCTGTCTTGTTGTCATGCTTGTGCAAGTTGTTCTGGCC TTGTTACTTTTTTGACCGGTCATGACTGCCAAGTTGATGATCAAAGTGTT ACTTTGGAACAAACTCATATATATTTTGGATGGGAGGAAATATCTGTATG ACTGTATATGCTTAATTAACTGGTCATGTGTATCTGCACACCTATCTGTA TAACTATATGAGAATGTTCATAAAACTTAAGGATGCGTCTTTAGTGATTG TACTTCGTTCTTTTCCGCCTTCCATGCAGGCCCGATTGCCCAGGGCAATG CAATTCCCCCCGTAGGAGGGGCCCCCGGCATCATCTCTGCTCTTCATTTA TTGAAGATTCGTGCTATACGTTTTACAAAATAACCCTCCCACCTCATCTC TTAGGCCTGCTGTAGTTTTTCTATCTAACCCCTAACGTTTTCGGATATTC TAAAAAAAAACGCTTGTTTGTCTCCTCACAGTCGATAGTCTTCTACACGT TCCTGTTTTTTTTCACCTTATTTTTCTCGTACAATTTCAGGAACATTCAA CAATTTTTTATGTATATTTTTAATTCTGAAAATGAAACATGCATAATTTA TTTTATCAACAATCTCTTTTGATAATTTTATGTTTCTACTTTTCATTTAA CAATATTTAGACACTCTTACTTTGTTTCATCCTAGATTCAGAAGTTTCAT AACAGATTCACACCTTTTACAAACTTGTTTCTGCCAAGAGATATTCATAT AATTTTTTCAAAGAATACATGCATAATCTCTGTTTCTTTTTCACCTCATT TTTTCATGGAATACATATTTTGTTGCTATATGAAACCCTACACATGTTAT ACCAAGAACATGTTTCTTCAAACAATCTGCCTAATGCGTGCTTCTTTTTC ACCTCATTTTTTCTTGTAAAATTTCAGAAATATTCAACTTTTTATGTACA TTTTTTATTCTGAAAATGAAATATCCATAATTTGTTTTTTCAATAATTTC ATTTGATAATATTTATTTTTGTACTTTTTATTTAACAATTTTTAGACACT CTTAATTTGTTTTATCCTAGATTCAGAAGTTTCATACAAGATTCACACGT TTTACAAACTTGTTTCTGCCAATAGATATTCATATAATTTAATCAACAAT TTCTTATATAATTATTTTTTCAATAATATTTCATAGAATTTTTTTAAGAA TTTTTCTAGAAATATCTGTACAAGTTTCATACTTTTTTCAAGGTAATGTT TTCATACAAGATTCACAAGTTTTCATACAAGATTCATAATTGAATATAGT CATAAGTAGAAATCGACACACCGATATTTATACACAGAGAATACATGTTT CTTTTTCACCTCATTTTTTCTTGTAAAATTTCAGAAATATTCAACTTTTT ATGTACATTTTTTATTCTGAAAATGAAATATCCATAATTTGTTTTTTCAA CAATTCATTTGATAATATTTATTTTTGTACTTTTTATTTAACAATTTTTA GACACTCTTAATTTGTTTTATCCTAGATTCAGAAGTTTCATACAAGATTC ACACACTTTTACAAACTTGTTTCTGCCAATAGATATTCATATAATTTAAT CAACAATTTCTTATATAATTAGTTTTTCAATAATATTTCATAGAATTTTT TTAAGAATTTTTCTAGAAATATCTGTACTAGTTTCATACTTTTTTCAAGA TAATGTTTTCATACAAGATTCACAAGTTTTCATACAAGATTCATAATTGA ATAGTCACAAGTAGAAATCGACACACCGATATTTATACACAGAGAATACA TGTGTCATACACGATTCATCAGCTTGCTTTTTCTACTGCTCATAAAACTG ATTTTCTACATGCGTCATATACAAGAAACTTACTGGAGCTGGAACGATTC ATGAACTTGCTTTTTCTACATGCGTCACTGGAAAAATTGTTTCACATGAT TTTCCTTTTCAATTTCCACGTGAACTGGACATATGTTGCTTCCGTCAACA GACCAAAATTAACCCGTTTGATATATGTTTCATAGATGATTCACAAAAAA TATATAAGAAACTTCACTGAAAAAATTGAAAGAACCATAGAAGAATGAGA TTCATCAAAGATCCATGCTTACATATGTCATCACAGATCAATCTAAATAA ACTGACCTTAAAAAGGAAAATCTAGAAAAAAATGGAAAAGAAAATAGGTC CTTAGTTCATTAGCTTCACAGATTCAACCAAGACTGAATTGTAGCATACA AGATTCATACAAGTAAAAAATCACTAGAACAAAATCACACAGATTCATCC ATGGCAAGAATATGGAAAGAGGAAATTACATGTTTCATAGAACAAAAAAA TAATAGAGGAAATTAGATCCGTCACTCAAACTTCTCTTGATTCAACAAAA ATTCATAGAAGATAAATAAAGATTCATACAAGAATCACTCCTGATTCAGA ACAAAATTCCATGAACTAGATATATCCATATATCCATCAAAGATTCATAC AAAACTCAATGGGAATTCATACAGTTCCATATCCAGATCCATTTTTATTA GAATTGAAGCAAATGCACAAATCAGTTTTGGGAAGGAATTGATACCAAGC ATAAAATCCAAAAAAAATAACATGGAGGATGCCACGGATCCAAGGCATGC GTGCCTAGATCCACCCCAATCAATCCTAAAACCAATGGCTCTTTGTACAG ACCGAGCTCACCATGTGCGCCTTGGCCATTGAAGATCCGTGGCCACGCGG TGAAGGAGGTCGCGATGAGGAGGACTCGTGGTGGAGCCACAGAGGTGTAG GAGGAGGCGCATATGGAGGGGTGCGAGCTCAGGATGGCATCGATCTGCAG CCTCCATGGCTGTCGGCGCTGGATCCCGATCTGCATCCTCCATGGCTGCA TGGTCGATACCTTCATGGTTGTTCTCCATGGGTCAAGGAGGAGACGATGA GACAAACAGGAGAGGTGGCGGCGCATGCACGGGGGAGGGGGAGAGCTCGG GAGGAGGAGGCACGGTGGGGAGGGGAGGCATGGCGTGGCGGCGCTGGGGA GGGAGGCAGGTCGTGGCGGCGCTGGGAGGGGTGGGCGTGGGCAGAGCGTG GGGATAGGGGGGTCGGGGGCTGCGCCGCTGCAGATTGAGTGGTCATCCTC TTCCCTGGACTACCAATTAAATCAAAAATAGCAGGAGGGCTTAAATGCAA ATGTGCCACTAGTGATGACTACGTTGACCATGCACGAATCTCCAACAAAC GTGCTGCACAGATGGTGTCGGGGGCCCAACTTACGCTGGGGAAATCCTCT CTCCGATTGCCCATCAAATTTTAAAGTGCTCCTGGAAAATTACGCAAGCC TTTCTACGAGGTTTCCTACTAAGCTCCATTTTGATTAGTACTCTTTTGTT CTCATGGTCATACGTAACTAACTAGTGTTTGTCATGCCATTTTCATTGCA GATCTTTCAAGGAAGATCATGCGAGGAATAGCATTGGCACTGGGTGGTCC CTCGGATGCTTTCGAAGGAGGAACGGCAGGAGACCCCTTCTGGTATCTCA GGTTGATTGGGTATCCAGTCTCAGCTGATATTCCACAGGACCAACGCACT GATACTGGATGGTAAGCCAAAAAATAAAACAAGTTTCACCATGCATTATC GCCTCGTAGCATGTCAACCAAGAACTATACTTACTTGGGTAGTTGGGTTA ATGCATCTCACTCTTTTTTTTTGTTCTGTGTTTCATCCATTGTATGGACA ATTCAGTGGAGTTCACACAGATTATGGTCAGTATACTTCACTTTCTTATT TGGATATCCATATATTTTCTTGATTTTGTTGTCTTCAAAGTATCTTGGAA ATGATTTGTCCTCACTTTGCTAAACCGCAGGCCTTCTGACACTGGTTAAC CAGGACGATGACATCTGTGCTCTTGAGAGTTAATAGCATAGAACTACCAG TTTCTGAGCAAAATTCCGGAAATCTACCAGTTTACGATTTCGCAGCAAAA ATCTGCCACATTTTGCGTCCGTTTTCGCAAATAGCACTAAACGTCCGCTG AACGCGAATTGACACCAGAACTGACGAGGCTGGCCCACCCGTCAGGCTGA CGTGGCAGTGTGATGTCTGCCATTTTGCATGCAGGTCCTCTAGTGTTGAC AGAAAATTGCGCAGAAGTCCCTGGCACTATTAAAACCTTCATAACTTTTG AATACGAATTCAAATGAAAAAAGTTTAAATACGAAAAGTGCTCAGAATTG TTTGAATCTTTTTTTACAAACTTTATTTATTATTTTATATAATTTAAATA TAAAAAATATTTTTTTAATTATACAAAAACTTTGGAAATTCATAACTTTA ACTATATAACTCCAAATAATATAAATAATATGTCTAAATTTATTTAAAAA ATCCAAGGAATCCATTTCGACGTGCTAAGCAGATGAAGCAGGACTACATG ATGACAGAAATGGACAGGTACAATGGAGCCAGTCTTCCTCATGCCAAGCC AGCCAATCAAGCTTTGGGTTTCACAAGGGAGGATGACCTCGTGGGGATTG ATGAGAGCAGGGAGAAGATGATACAGTGGCTCACAGATGATCTGGAGGAA CAGAGAAGCAGAATTTCCACTGTTTGGGGGATGCCGGGTGTCGGTAAGAC CACTCTGGTTGCTCATGTGTACAATGCAGTGAAAGTGGAATTTGATGCCG CGGCATGGATAACCGTGTCAAAGAGCTACAGCTTTGAAGATCTGCTGAAG AAGATTGCTCGAGGGTTCGGCATCGCGGTTGATGTTGCCAACATGGAGAT GAGAAGCCTAGGTAAGGCCATACATAATTACCTCCGAGGTAAAAGCTTCA TCTTAATTCTGGATGATGTTTGGGTCGCTGATGTGTGGACGGAGATAAGG AATCTCTTTCCAACCGACAGCATTGGCCGATACGTTATCACATCAAGAAA CCATGAGGTATCATTGTTGGCAACTGGAAATGGTGCGATTCACTTGGAAC CACTGCAAGCGCATCACTCCTGGTTGTTGTTCTGCAGAGAAGCTTTTTGG AATGATGATGTGAAAGAGTGCCCTTTAGAGTTACGGAATTTGGCCGAGAG GTTTATAAAGAAATGCAATGGCTTGCCTATTGCTATTGCGTGCATAGGCC GCCTACTGTCCCAGAAACGTCCAATTCATGCTGAATGGGGAAATGTGTAC ATGGAGTTAGAATTGCAGTCGGCGAAGAATGTGATGCCTGATGTTGATAT GGTTCTGAAAGTCAGCTTGGAGGACCTTCCATATGATTTGAAGAATTGTT TCTTACATTGTGCATTATTCCCAGAAGATTATCCGATAAAGAGAAGGAGA GTAATGAGGCAATGGATTGCTGCTGGATTGATCACAGGAAAGGAGAGCAA AACATTGGAGGAAGTGCACAGGGATACCTGAATGAGCTAGTAAACCGAAG CTTACTGCAGGTAGTGGAGAGGAACTACATGGGGCGGTTGAAATGCTGCC GGGTGCATGATGTCATACGCCTTCTTGCCCTTAATAAAGCCGGGGAAGAA TGCTTCGGCAAAGTGTATGATGGCTCCAGAGCATTCTCCGTGGAACCCAC GCGTCGCATATCACTCAATAGGGAAAACCTTGATCAACTGAGCCGATCAG ATTTAACACATCTTCGCACAATTCTTGTTTTTAAGAGGTATATCAATATT GATTTGCTGAAGCCTCTCCTGACATCTTCAAATCTTCTGTCAACATTGGA TCTACAAGGCGCTCGTATACAGATGCTTCCTGCTGAGGTGTTTAACTTGT TTAATCTGCGGTATTTGGGCCTTAGAAATACTGATATCAAAAGTCTATCT GAAGAAATAAGAAGATTGCAGAACTTAGAAGTCTTGGATGCTTACAACAC CAAGCTGTCGTACTTACCAAACAATGTGGTTAAACTTCAGAAGCTGAGAT ACCTGTTTGCATGTACTGATGGTGGAGGATCAGAAATTAAGCCTTTTGGT GGAGTCAAGGTGCCTAGTGGCATACGTCACTTGACGTCGCTGCATGCTCT GCAATGTGTGAAAGCTAGCACTGAGATTCTGCGTGAAGTTGGAGCTTTGA CAGAGCTAAGAACATTTGGTGTCTCTGATGTGAAAAGCGAGCACTCTGCT GACTTGAGCAATGCTATCACCAAAATGATCCATCTTGTTCATCTGGAAAT TACATCTATAGGGGAGGAGGAAGTGCTGCAGCTTGAGGGACTTCATTTAC CTCTGTCCCTTTCTAAACTTGGTTTAGAAGGGCAGCTAGAAAAAGCATCA ATGACGCAGGTTGTGTCATCTCTGTCCCAGATTCATAACCTCACATGGCT GCAGTTATCATTCTCCAAAATGGATGAGGAATCCTTTTCCAGGCTGTCGG CATTACGCGGTTTATGCTTCCTTCAGCTTCTCAATTCTTTCGAAGGGGAA AATATGCATTTCTCTTCAGTATCATTTCCAAAGCTCCGGTTTCTATCTGT TTGGGACGCGCCAGAGCTCAGTCAAGTTGAAATAGAAGAAGGTGCATTGC AAAGCCTCGTTGAGCTAGTGCTTGTAGACTGTCCTGAACTAATGTTTCTT CCTCATGGTATTGAGCACCTCAGAGCCCTTGAGAAACTACATCTTATAGA AACTTCAGAAGAGCTCACAGAGAAGCTTCTACAAGAGAGTGAACCAAATG AGTGCAATGAGGATCTTATGAAGATTAGACACATCAAGACGGTTATTGTT CAACTTTCCAGAGAAGGCATACGGGAAAGGATTAGGTGGTCGCAAGATAT CTCTGCTCCAAGGTAAGAGTTTGATGTTTCCTTTGTAGGTATAACAAATA GAGCAATTGCATGTAAATTGTCATGTGATTTTCACCATTTGTAAACAAAA ACTAGCAGAATTTAGTTTGTAGAGTGTCTATCTTCACCTGGAATCTGTGA ACTCGTTTGACCATATAACACTGTGGTGCACCGTTCCCATTTTTCTCATA TGAAATTACTAAGATGTGTTCAAGTTAAGACAATAAGTAAATAAAATATG ATTAGGATTTAACATACTCTACATGTTTCCAGGCTCCGATTAGCAGCCTT GGTGATGATATTTTCCTTTTGTGTCAGCATATATGTACTAATCAAAGCAA AACTAAGTACTGTTTTTATCATTCCCAGGTCCTGATGCTAAAATCTGCAC CAAAATCTGCAATGCAGTAATGAAACAGAGAACCGCGAACCTTTTATACG GCTGCACGAGCACAATGGAGTTGAATAGTAGCAACGCAAAATGCACCTTT CAGAGTGGTAGCAGCTGGTGTGAACCTGAAGAGCCTCTTCAGGCAGATGA CCGTCAAGCAATGGCCTTTTGATCTTCTGTTCTGGCCTGAAAGCTGATAA GAATTTGGTTGGTACATCAAAAGCATTACAAGGAGATTCAATCAGTATTC ACCCTGCAGCCATTTGTAATTTGTTGTCATGGGTCTATTTTTCTTCCCTA GCCCTTCTTAGGCGCGCCGTTGCTCTCACCTATATGGTCTAATCCATCCA TGCTCAATCGTAATTCTACACACATGGAGTTATGCATGCGCAGAATTAAA CTAAGCTAGTCGAACGCTAATAGCTTTAGCTTTGGGTTAACATAGCCACA CAGGAGTAGTACATCTGCAAAAAACAGTTCTGAACTAAAGAAGAAAGAAG TCCATATAACCCCCCTATGTATCGAGTTTGGGTCACTAACCCCCCTTAAC TATGAGACGGGCCATTTAATCCCCCTAAGTATTCAAAACCGGGCAAATAA CCCCTTGGATGCTGATGGCTGTTTTGGTGGTGGTATTGGCTCAGGTGGAT GGTGGCATACTCGGCAGCCCAACTGTGCGTAATATAGAGCTGCATGATTC AGAGATCGATTTCACAAAGAAAAAAAGCAGTAGCGAGTCTGGCGACTGCT CGGCTCGATCCTGGAGTTCGCTTGTCTCTCGATCAGCAGAAGAAAAAGAG GAAGCAACGAATCAGGTGTACAACTGCTTGATTCAATCCTAGGAGCAAGC ATGTCTCATTCGACTTAGGATCTCATGTGCACAACTTCCTGTTTCAATCC TAGGAAGCAGCGAATCAGGTCCACAACGCTAGCGCATGTGGCCACGTCTA GCTAGAGCTAGCTTATGTTCAGTCATCCAGATGCTCACGTGCACTGTATA GTGTGGATCTCGATCAGATCGATGGTGCCGGTGACCAAAGCGCCATTCCT GCCATCGACGGCGGCATGGGAGAGGTCACGCCGTGGCCATCCTTCGTGCG GGACAAGGACGAGCGGCCCAAGGTGGCGCACGACCGCTTCAGCGACGAGG TGCTGATGATCTCGTTCTACGACATCGACGTCAGTGCGCGCAGGGCCGAG ATCGGGGACCACGTGGCCGCGGTGTGCGAGGAGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.