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GrainGenes Sequence Report: AA001832

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Sequence
AA001832
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA001832
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCATACATAAGTATATGTCTCATGCATAGATAGACATGTCTCATACATA
GATAAATATATGTCTCATATACCAATAGATAGATACGTCTGCCGTCTCAG
CGACGTCGTCTGCCGCGACGCTCGGGTGGTGGGTTAGGAGGCGTCGTCCA
ACCGAACCTGTGGGGCGCCGAACCTGTCGGGGAGGAATCACCGACCCGTA
CTCATCGTACTGAGTCTCCTGTGTGGGGTCAGGGGGGAGTCTGAAAAATG
TTGAGCCAACTTCTCTGCGTCATGAAATCCTGAGTGCTATGATCAGCGTC
CTGATCAGTCCAGGCGGATCCGGACATAGACGACTGATAGCCAGGCATAG
ACCCCTGCATTCCGAATGCTCCTGCACATGAAAACGAAGTATGTAAGAAC
TTGACATGAACTGAGCCTCGACGCTTATCTTGTAAGACACATACCCTGTG
GTTGTGGCTATGGGCGAAACCCGTAGTTTGGCATGGGAGGGTGACCCCAA
GGCTCCTGCTGCTGGTGCTGTCACGACGAACCTCCATCGTGCAAAGGTGG
CTGCTGCTGCCAACAGTCGAAAGAATACTACTGATGCCACGTCGAACCTC
CAGCCTGGTCTGAGGGAGAAGGTCTCGGAGTCGTCTGTGGTGTAAGCCGT
GGACGGGGAGACTGTCGTAGGGGCGAGGGTGGCTGCTGCTGCTGGTGGTG
CGTCGAGTGCCGCGAAGGACGCTGTGGTGCCGGGTGGTGAGCAATGTCCG
AAGGGAGGGTGCACGTGATAAACCCGTAGATACGCCGTATCTTCTCCTCC
AGGTGACTCAGCCAGGTCTCCTGGTCCTGCCGGTGAATAAGTAGGGGTCC
GGACGAAAGAGAGCGTCTGTACTCAACACTCTCCGTCTCAAGATCGACTA
ACATCTGTGTCTGCAAGTGACACCACAAGGTTTGCCATATATAGATGGAA
AATTATGTAATAAATAGATGCATTAGATGAAGAACATACCGCGTGTTGTC
TGCTGCCCACAGTCGACTGGCTCGATTAACTATCCCAAGTAGCCACGCCC
GGCATCTCCTCTGGGTGAGATTGCTGCGTGATGCGTAGTCGTGTGGCGCT
CATGTAGCTATCCAAATACCTGTTGAACTCTTCCATGTCAAACTTGGCGT
TCGAGTCCCAGACTCAGGCTGTAGCGGTGTCCCACTCTTGAACGTACACC
CCAACCCTGTGTAGCCAACCCGTGGCGGTCTTGCTACTTCCCTTTCTCCA
CAACCTAACATTTAACATGGTTAGTGTCATCTCAATAAATTATGTTAAGA
TGGAAGTAATGTGTAAAAGAAACATACGTGTGTACGACTGAAGGTATGAC
GCTCTCCGTGCCAACCCGCCGGTGCCTGTAGCGGTCCAATGGGCTGTCCA
GCCAAAGGCCAACAGGTATGACACGTCCTAGAGAGTAGGATCCATCTCTC
CCCAGCGTGTCATGTAGCAAAGACCACCTCTCCAAAGGCTCGTGCTCTAT
CCACTGTTGGAAGTTCTTGATCGATCTGCCGAGCCTTCTTCTTGTACCAG
GTGGATCAAATCCAGGCAAGTCACAAAGCCCTACAGGATCTTCCTCCACA
GGCGCAGCTCCAGTAGCTACCTGTGCAGCTACTGCTGCTTGATGTGCAGC
TACGGCTGCGTTTTGCGTAGCTTTCCTTGCCCTCACATGTTTCTGAGTAA
ATTCATCGAGCTTTGCGCGTATGAAATCGTGCTTCCATTCTTGGTTCTGC
TTGCATAGTTTTTTAAATAGATTCATGAGGTTCTTGTTTCTGAACTGTGA
GAAGAAATTAGCACCCAAATGGCGCATGCACCACCGGGCTTTGCATGTCA
AGCCAAGGTGTTTGCTCTTCCAGCCCTGGCTGTGTCAGCCGTTTTACGGC
ATTGAGTATACCTGCATGCCTATCATGAATGATGCACACATTGGTCTTGT
CTTTCACAACTGCTATTTTGAGCTGCCTAAAGAACCATGTCCAACTTTCA
GTGTTTTCGCCCTCCACGAAAGCAAATGTGAGTGGGACAATCTGATTGTT
GCCGTCTTGACCAATGGCGGTAAGGATCTGACCCTTGTACTTGCCAGTTA
GAAAAGTACCGTCTACACATATCACTGGACGACAATAAGTGAAAGCTTAG
ATGCATACAACAAAAGAGAAGAACACTCGATGAAGCACCTTCACGGATGG
ATCATCGGGTATCACATAATATTGTATGTCGACATAGGTGCCTGGGTTTC
TATCCTGCAATGTCTGAAGTTGTCGGACCACGGAGTCATACGAGTCTCTA
AACAAACCAAACCTCTCCTCAAGAGCCCTTTGCTTTGCCCTCCAAGCCTT
GCCATACGAAATGGAGTACTTAAACCGGGTCTTTACTTTCTTCTGTATAC
TGGGTACTGTCATCGCTTTGCACTCTACTAAGTCCGTGTAAAGCAGCCGA
GCTAGAAGTGTGGAGGAGAGGTTAAGATGATCTTCAGAAACACTGTGTAG
CTCACATGTGTTCTGCACAAAGTCGCTCACCAACCAAGTTGTGTTATACG
TAGGGACATAGGCATGCACCCTGCCTGGACAATTTATATCCACGCATTCC
ATTGTCAAGTATTTCTTAGAGGACACTGTTGTTTTTAAAACCCTGTGTGT
TGACATTGTCCAAGCAATGACTGCATCTTGCAAATGTTGCTTGTCTTGAT
ATCTGGCACCCTGGGAAATTTTGTTGCTGTGATATTCCCACGTAGAATCA
TGACCATCATCAACGGTCATTCCGGTTGACATGTTTTGATTCCATGAAGC
AGGAACCGGCATATGTCCTTTCCACCATTGCCTTCTCCATCAAAATCCTC
AGGGTCATCAGAATCACCACTCTCGCCATCCATGTAATCCTCCTCTTCCA
TCATGTTCTGCATGCCTCCATCTTCCTTGTCCGCATCTACCTCTCCACTA
TAGTCTCCACCTCCGGCCTGACTGCTCTGTCCCGATTCATAACCACCGCC
TCCTCCTCCTCCTCCTATCTGACTGCTCTGCCCCGATTCATAACCACCGC
CTCCAGCACTGGACATAGAGTACATCCCGTAACTTGAATCAGCACTATGG
CGAGAAACATGTCCACCATCGATCTCCTCCAAGACAGGAAGCACTAATGC
GACAGGGTTTACATGCCTATCTTCGCAGCCTTTTAACCACTTAAACCAGT
CTCTGTCAGTATCTACATGCCTTAAAGTCCAGAAAATATTTTTTCTTGAC
TTTGTCCACAATGCTTGCACGCTGACGATGTACGTCTCGATGTTATAGCC
TAAACATCCTGTCAACCATTCCTTCAACTGACTAACACTCCAGGTTTGAG
GGGCAGTCAAATCTAACTGTATACACATGAACTCTCCTAGATCTGCTCCA
AAGTCATTTGTTCGAATATTCCCAGGACCGTAATAAAACACGAACTTCAC
TAAATTGGTCATCTCTGCTGACATAAAATAAACAACCTAATCAATTAATT
ATCAACAACGCGTATAACTTAGGGCAATGCTTGCAAACATTCTAAAAATA
TGATACCGGTCAAATATTGCTACTAATCCACCGGTCAAATATTTGTGTCT
AACCCATCGATCAAATATTGTTACTCATCCACTAGCCAAATATTCTAAAA
AAATATGATATTATTGCTACCGAACAAATATTGCTACTAATCCACCGACC
AAATATTTGTGTCTAATCCATCGATCAAATATTGTTACTAATCCACTAGG
CAAATATTCTAATAGACTAAGCATACCCACGTACGTAACTATATATAATA
ACCATGATTATCGAAAGATTAGAGTTTACCCTTAAAGCGAGAGAAGCCAC
TCGGTCCACCACCACAGCTCCACCACAGACAGCCTCAGCTCCTCCACCAC
AGCTCCACCACCATTGCCATTCACCACAGCTTCACCACCGTTCCTCCAAC
AAACTAACACCAAATCGAGCTATGAGCTAACCCATTCGTAGATCGGGCTT
CCACTATCTCTCTACTGGTTTTGGATTGAAGTTTTTGTGGTCAAATCTAG
CCAAATCAGGCAAAAATAGCGATTTTTGGAACTGGGACGACGAACAGGAG
AGAGAGAGGAGCGCTCGCGGTCGCGTGGAGAAGAAAGGAGGCGCTGGAGG
CGCGGCGTCGCGTGGCCCTTATCCTGGCCCCAGTCGGCCTGGGCCTGGCC
GACTGAACCTGGCGACCTGGGTCGGTCCCGCAGCCCCACTGGCCGACCTA
CTGTCGTTCAGCTGCTGGATGAGTGCTAGTTTGTCGTCTAGCTGCTGGCC
GATTGGTCCAGTCGGCTTGCCCCAGGCCGACAAAGTGCTAGATCTGTAAT
TTCCAAAAAAGTATAATATAACTCAAATTAATTAAATAATGCGTATTATT
TAAAAAAAAATCGCCCTTTGATCCGGGTTGAGTGCCTTGGTTGTTTCTTT
TGTTTCCTCTTTTCTTTTTCTTGCCTTTGTTTTCCTGCCTCTACCTTTTT
TTAACAAACTCTCCATCTAATCAATGAATTTAGTAACTCTTGTACTAACA
TTAAAAAAACATTTTGAACTATATTTTTTCATAATGGAAACATCTAGTCC
CGCGAGCCAAAGTGGAATTACATCAGCATCAACCATATGCGAAATAAAAA
CTGGCCCTGATTTTCACCAAACATTAGTCCAATCCCAGAGACTATCAGAC
TATGCATGTTGCGAAGTGCGTGAGCGGCCCTATTGAATTGTGTCTTTCCA
AAATAGAAACATCTAGCCCTGCGAGCCAAAGTGGAACCACATCAGCATCA
ACCATATGCAAAATGAAAACTGGTCCTGATTTCCACCAAAAATTAGTCCA
ATCCCAGAGACTATCAGACTATGCATGTTGCGCAAGTGCGTGAGCGGCCC
TATTATACTGACATGTTGTACATGGTACTAGTGTAGACTAAGAACGAGAA
TCTCGTTCCCACTTATGGGCAGAAAAACAAGAGAAAATTTTGGACAGATG
GTTTCAAGGTTCTAGAGAATGTCATTGATCGTTGTTGCTTTGGAGAAGTA
TTCTGGGATCTCAAGGCTCCACAGATATGATACCATAGCGACGGGTCTCA
GCAAGAAGCAATGAATCACTTTTTAAGTTCCCTGCAACAAACGGAAAGAA
TGAGTGTAGATATGATACCATGGGTCCGTGCAGACTTGCAAGGAATCATT
ATATAAGTTCCCGAAATATTTTTTGTTGCTACAAACCATCCAAGATCTCT
TTATTGAAATCACATAGGAGTTACATCAGCATCAACCAGCTACAATCAGT
GCTGGATTCCACCAGAAATTAGTTGAATTCCAGAGGCCATGTTCCGCAAG
TGCGCCAGAAATTAGTCGAATTCCAGTCAGAGACCATGTTCTGCAAGTGC
GCAAGCCACCGTATTGATAGAGACCAACCTCACTTGGCAGAAAAGAGAAA
AATGGACAGACGGTTCCTGAGGTTCTAGAGAAAGTCACCCATCGCTGTTG
CTTCGGAAAGGTGTACTGGAATCCCGGGACTCCGTAGACTTGATACTGAT
GGATCTGAGCAACTTGCATCGAATCACTAGTACAGTATATAAGTTCCCTG
CAACAAAAGGAAAGAAGCACTATAAATGCACACTAAGTTGTCAGCATGCA
AACCAGCCTTTCCAATTGTCGCGTAGGCATGTCGATCATGGTAGTCATGG
GGTTCTTCATGTTTGCCTCCCTTTGTCTCCCTTGCTCGGCCAGCTCCGTG
CATGTAGCCACTTTGTCCACAACCGAAACTGCCACAACAAGCGCCACAGA
CCACCAAGCTCTCTTGTCATTTAGGTCTCTGATAAAAGGAGATCCACTCC
AGGCTCTGAATTCATGGGGAAACCAGTCGATCCCCATGTGCCGGTGGCAT
GGCGTGGCATGCGGCTTGCGTGGCCACCGCCGTGGCCGTGTCGTAGCACT
GGATCTCCATGGGCTCAACCTTCTCGGCACCATTGCATCTTCCATAGGTA
ATCTGACTTACCTCAGGCAGTTGGCGCTCCAAGAGAACCACTTTTATGGT
ACCATACCATCAGAGCTTGGACACCTTGTAGGACTTGAGAATCTGAACCT
CAGCAGCAACTACATCGGCGGGAACATCCCGCCGGCGCTGACCTCTTGTG
TGCATCTTCAAGTTGTTTGCCTCAACCAAAACAACCTCCAAGGGGTCATA
CCTTCCAGCCTTGGTGTCTTGTCAAACCTTCAAGTTATTGATCTGAGGCA
CAACATGCTGAAAGGCTCTGTTCCCTCGGAGTTGGCAGCGCTGCACAATC
TTGAGCTACTCGCTCTTGGATACAACAACCTCACGGGAAATATCCCTGTG
GAGATTGGAAACCTGAAGGGCCTAATGTATCTTAATCTAAGAGCAAACAT
GATAGTAGGAGAAATCCCAAAGGATATTGCAAATCTTACAAACTTAGTAG
ATTTATATCTTGATTCGAATGGTCTGACAGGCCCTGTTCCTGCTTCTCTC
GGAGGCCTCCAGAAATTACAGATTTTATATCTTATGAATAACCACCTATC
AGGGCCAATTCCCCCTTCCGTGGGGAACCTCTCATCTCTACTAGTTCTAG
ATGTCCAATTCAATGGCCTAACAGGTAGCATCCCTGAATCGTTAGGAAAT
TTGAATCTCCTCAACGTCCTTTCCCTCTTATCTAATAGTCTTACAGGCTC
AATCCCTCGAACTCTTGGAAAACTTAGCTCTCTAGTTGAGTTTTATCTGA
ATGGGAATCAGCTCCAAGGTTCTATACCACCTTCGGTTTACAATCTTTCA
TCCCTCCAAATTTTTATCATTCAATACAACAACCTTACTGGGTCCATTTC
AGATGAATTGGGTAATAAGTTTCCAGAACTCCAGAAGCTTGCAATAGACC
ATAATCAATTTCATGGGCCCATTCCATATTCTTTGTGCAATGCTTCAATG
CTTGAATTTGTTCAGCTGGGCGTTAACTTTATTTCCGGAGTAATACCAAA
ATGTCTTGGAGCTAACATGAAGAGCTTAACGTCACTTGCTCTCGCAGGTG
CTCAACTAGAAGCAAGGAATGATGCCGATTGGGGCTTCATTTCTAGCCTG
ACAAACTGTAGTATGTTGCAGACACTAAATCTTGGCAGCAATAAACTAGG
AGGGGTGCTTCCAAATTCAATAGCTAATCTTTCCACGAACTTAGGACATC
TCAACTTGGGTAGCAACATGCTACGAGGAAATATACCTGAAGGAATTGGA
AACCTTTTCAACATGCAACATTTAGTCTTGGCAAATAATTTCCTACATGG
AAACATTCCTGAGTCCATTGGCAATCTTGGAATCTTGGGTTTACTATACT
TTGCAAACAATAGTTTGTCTGGACCAATTCCACCAACACTTGGAAATATC
ACAGCTTTAATTACACTCGTCCTCAGCCAAAATTTTCTTACAGGCCCCAT
ACCATCCAGTCTTAGAAGCTGCCCTCTGGAGACACTGAGCCTAGCATTCA
ATCAGCTTGTTGGTCCAATACCGAAAGAGATTTTCCTCATAGCTACACTA
TCTGTTGCCTTACAGCTCCAAGGCAACATGTTAACTGGGACATTTCCTCC
AGAAGTTAGTAATCTAGTAAACCTGGGATATCTTGATGTGTCTGATAACA
AGTTATCTGGCGCAATTCCTACCTCTTTGTCTGAGTGCCGTAGTTTGGAG
TATCTCAATCTGAGCGGAAACATATTTCAAGGCACAATTCCAGCGTCAAT
TTCACAGATGAAAGGACTTCTAGTTCTTGATGTTTCAAAAAATAACTTAT
CTGGGGACATTCCTGTCTTCCTCGAGGACATGCATGGGCTCCTTAGCCTG
AACATATCATTCAACAATTTTGAGGGTGAAGTTCCAGAACGTGGATTATT
TCTGAATGCAAGTAAAGCTCTGATTGAAGGGAACAATGGCTTATGTGGAG
GTATCCCCCAATTTAACTTGCCTCTCTGCTCAAGTCATACATCAAAGAAG
TGGTCTCACAAGCTTGTTGTGTCAATCTCAGTAGGAAGCACAGTTTTGTT
CATTATCTTAGTACTATTTGCACTATTTGCACAACGGAATTTGAGAAGCA
AGTTTGCAAAGAGAAGGGTTCCATCACTCCATGGTGTACAACATATGAGG
GTTACATATGCTGAATTAGTGAAAGCAACAAGTGAGTTTTCTCCAGAGAA
CCTTTTAGGCACAGGAAGCTTTGGCTCCGTGTACAAAGGAACAATGGTGA
ATGGTGATCAGGAAGTGATTGTCGCCGTGAAGGTGCTCAACCTCCAGCAG
CGTGGGGCATCTCAAAGCTTTGTTGCAGAGTGCGAGACCTTAAGATGCGT
TAGACATCGAAATCTTGTGAAGATATTGACAGTGTGCTCCAGTATTGATT
TCAAGGGCCTGGACTTCAAAGCTCTTGTGTTTGAGTTTATGCCGAATGGA
AATCTAGACCAATGGCTACACAACCATCTCCTGGAAGATGGGAGGCAGGG
GGTGCTCAGTCTTACCCAAAGGATAGATATTGCCATTGATGTAGCTTTGG
GACTCGAATACCTTCATCACTATAAGCCAGTGCCGATAGTTCATTGTGAT
CTGAAGCCAAGCAATATTCTCCTCGATGATGACAAGGTTGCCCATGTGGG
TGACTTTGGACTTGCAAGGTTCTTGCATCAAGATGATACTAGCCTCCCAG
AGATATCAAGTGGTTGGGCTACAAGAAGGGGAACATTTGGTTATGCTGCC
CCAGGTTAGCCATTAACCCCTATCGTTCATCTATGTACGCTAATTCCTTT
AATTTTTTTGTTAATTTCCATCAAAACGCTTCTAATTCTACTTGTGTACA
CACCTTAAGTGGCCCTAATTCTAAAGATATACAAACTCTTATACACGCTA
CAATAAAGGAAATGGGGTTTAATATGCACTATTTATGTACTTAGGGTCAT
CTGTACAGTTTTACAATTTTAGTGTTGCATAAGCTGATACCCATTTTGTA
ATGATTTTTTTCTTACTGATGAAACATTGCTATCCCAGATAGTAAGTCAT
TTCCATCAAAACACTAAATCCTTCAACAAAATTCAGCGTTGTTTTCTTCA
ACATGCTTTCTCATGGAAAACTATAATTACATATACATCTCTTTTCCAGA
GTACGGTCAAGGAAATGAAGTCTCGGTCTGTGGTGATACCTACAGCTATG
GAATACTGCTGTTAGAGTTGTTCACTGGTAAAAGGCCAACGGATGATGAG
TTTGTGCAAGATCTAAACTTGCATAGGCACGTCGAAATAACACTGAGAGA
TAAAGCCACCAACGTCGTGGATATGTGCTTACTATCTTCACTGGAGGAAG
GGCCAGAAATAACTACCGCATCTGAGAGTGCCACAGAGATGAGAACTACG
TGCATCACTTCAGTTCTGCACATTGGGATATTATGTTCGAGGGAAGTGCC
AACTGATCGTATGCAGATTGGTGATGCTACGAGAGAGCTAATTGCGATCA
GAGACAAGTACCGCAGGCACGTATTGAGTGAAGGTGAACCCATCTAAATG
CTCGATGGCCCACGCTTCACTGAGATCAGTATTAATTCATCTGGTTCACC
AGATTAAACAGAAATTGGTGCAAGCTTTGTTGCTGCAATTCAGTAGCCAA
TTAATATGTATGTATTTTGAACATTTTCAACATGATAATGTCTATGGTGT
GTGCACAATGGTGTACTCGTACGCAATGTATCTTAGCCATCAGGTCAAAT
TCTAGTTAGAACGTACTTAGAACCACATCATGTTTTTTTTTCTGTGCTTC
TATTCTATCATGAGTAGTGCTTGTCTAACGGCTTCTTCACGGGTGAAAGG
AAACCGACATCCTCCTCTCGCCTCCAGCTTATAGAACCGTAAAGTCCGCC
GCCATTATCTCATGCCTAGCTAGCCAAAGGGGTAGACTCGAATGAGTAAC
TTCAGTTTTTCTGATTCGGCAAAAGTATGCATCCAACAATATATTTTAGT
TGAACAAAAATATATTCCAGAAGCAGAGATGTCTAACGGCTTGGACACGG
GTTAAGGAAAATGACATGTGTAGACTGCCCTCGTCCATTTTCCTCAACCA
GTGGTGTTATAGATGCCCCGCGCCCGCAAAGGTTACTGTCATCATCTCAT
GCCCTGGCTAGAGGCGTAGGCCCGATTGGTGGACTTCCACTTTTCTGGCT
AGTCTAATTATTTCTTCTTAAAAAGGGTCAGATTCTAAAAACATAGTTGT
CTAACTGCTTTTACACGGGTACTGGAAAATGACATATGACTTCGACCAGG
TCTTTCCTTCAAGGCGGACCCTAGGATTAACGTAATATGGACCTCCTATG
CATCCGGGAGAGACAACAAAACATTTATTTTAGATGCATATCCAGGTTTT
GTATGTACTACACCCTAAGTATGGACTCTCTTTCAATAAACGAAGCTTTA
TTTACCCAAATGCTGCATCAAGATGATACAGTCATAGAGAGTTTATCAAT
AGAATCAACCCTTTTGGAATTATCAAGCAACTCAGCAGAATCATCAGGCA
CTTTTTATGGAGAGGCAACAATCCAGAGTCCATTAAGCAATCCTTGGCTG
CTTGGTGGATGATTTGTAAACCAAAAAGAAGTGGTCTGGGCATTTTAGGT
TTAAAAAAAAACTGAATGAAGCTCTCCTCATTAAGCACCTCCATAAACTC
TATAACAAGGAGGACATCCTGTCGGTTCAGCTTATATGGAAATATTACCC
TCTGACTCCTTTTGGTGAAGAGATATCATGAAGTTAGTTGATAATTGCAG
GGAACTCTCTGAGATCTCTACTGGGGCAGGTGACACAACCTTGTTCTGGT
CAGATAAATGGAATGGCACAAGCTTGCAACAGCAATTACCTATACTCTTT
TTTATTTTTCCCTAGAATTTAATCCTTCAGTCCAAGGGGTATACGTAATG
CAAGTGGTTGAAGAACTTCTCTGTCCTGAGTTCATGCTTCTATTTTAAGT
CACTGCAATTAAAGAAGCATTTTCAGTAGAACTGTTTCTGTTGCTCACAC
GTTTGCTGGTGCATGACAGCACATGATTAGTTTGCCCTTTACATAAGTCT
TAATTTTTCTTTGACTGAAATCGTGTTGCGTTGTGGATCATCTTCCACTT
TACTAGTAGTAAATGTATGTCTGTCGTGTATTTAAAATGTGGTTTGACAC
TAAATCAAATAAAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.