Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA036422

[Submit comment/correction]

Sequence	AA036422
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA036422
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AACACACCAAGAAAAGTCTCCCTCGCAACCACTCCCCCTCACTTCCCCTT TCTCCAAGCCGAGACCACCTCAATCCCCCCAATCCCTCCGATGGCGCCCA AGGCCGAGAAGAAGCCGGCGGAGAAGAAGCCCGCGGCCGAGGTCGAGAAG GCGGAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTCCC GGCCTCCAAGTCCGCCTCCAAGGAGGGCGGCGACAAGAAGGCGAGGAAGA AGAACAAGAAGTCCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTG AAGCAGGTGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCAT GAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGGGAGGCCGCCA AGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAG ACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTC CGAGGGCACCAAGGCCGTCACCAAGTTCACCAGCAACTAAGCTAGCAGGA AGATGTATCTGATACTAGGTTTCCCTTCGCCGTAGTCGTGTCCGTGTTCT CCTGTTAGCACCTGGTTGCCGTCGGTTCTGTTGTAGCGTTAGGTAGGTTG CTCGCCTGCTTTGTAAATCGTGCAATGTTGTAATGGACGGCTTTGATTTC AAGTAATGGATGTGGAGTTGTATTTCTATCGCTGCCTTTCCAACTGTGGC GTCATTTTGATTTGGGGATCTAGGGTTTGAGGAGCAGGGCTCGTGAATAT GGCGATGCGTGGAGGGAGCGTGGTTGGTTTGGCCTCTCGGCTTTTGGGGG CCAAGTGTTTCAGCACCGAGATATTTGTGAGCAGTAAGTACTAGATCTAT CTATAGTTCATCGCAGCCTCTGTAATCCTGTAGGCATCTTCGATTCGTAA GAAGTGCGCCACTTTTTTTGTGTGTGGATGGATCCAGCACTGGTCGGTGT GGTGCCCTCTGCCTTCCTTTTCCCCTGTGAATATTATCTTTAAGCTTTGG CATGGAATGTTGAGTCTGCTACTGATATCAGGTTCTTTAGAATATGATTC CTATGGATTGTAGCAAAAGCCAACGACAACAATGCTAGCCTTTTGCCATC TTCCATACGAGTAGTTCCCATGATGCTAGTCTTGTCATAGTATTTGAGCT ACTGATTGAGCTCTACCTTTTGTTCTACACATTACAGTTTGTTGCTATAT CTTGCTTACCATCGGAAATTTAGTACTGTAGTAATATATATCTGAATACT CCCTTTGTTTCATAACATAAGATGTTTTAGCTTTGTAAAAGGAGTGTATC TAGACATTTTTTTAGTGTGTAGATTCACTCCGAACTTATACACTAAGAAA ATGTCTAGATACACTTCTTTTACATAGCTAAAACATCTTATATTATGAAA TGGAGGAAGTAGTTGCCATGGTCTTGAGGTACACATCACAAAAAAGATAG TGACATTGTTGCAGCTCTGTTCATAGTTTGCCACTTGATTGTAATTTAAA CATTACCGTAGATGTTCTACCATTTACCCAGTGAAGCCTTACAAGTTCTG CTCACATGGAATTCTGCACCACGCTTTGAACTGATGGTGTCTTCTAATTC TGCAAAGCAGGAACAACATATAACATATATTCATCATTTTGGATCTTTCT GTAGGGCTATCATTCTACACAACTGAGGAAGAACTTGAAAGCATCTTCTC ACCATTTGGTGCCGTCAAGGAAGGTACCTATGCTATTTTAGAACTTGTCG ATGCTGTTTACCAAGGGGAAATTGGAAATCTTTGTTATTGCTTCCTACTG CCACTTGAAGTTCTTCTTCTGGTTCCATGGAAACGTTCAACTCACATATT GATTTCTGTTTCTCATCATATATAGCTCGGTTAGTGAGAGACAATCAAAC TGGTAGGCCAAAGGGCTTTGGTTTTGTGAAATATTCATCAGAAGCAGAGG CACAAAAAGCTGTCAAGGCAATGGATGGAAGGGTATTTGCTCTGCTCAAT TGCTATCTTCCTTACAACCTTCATACATTATTTGCTGATGTTAACACATT GAGAATTTTACGTACTGAGATGTTTAACTGTCATTTATCTGAGAGGAGAC TGCTGAAGTTCCATGATAGAAAACGAAGTGCAGCCATAATTTATTACTGC TGATACTGGTTTGTTCCGAACTGAAACTAGCTAAAGAAGTCAAAAGTAAA AAACCCTGTCCATGATCTACTTACTGTCAACTAGTTGCAGATAAATAAAG AAACGTGCTGCCACAGAGCTGTTTCCTTACGTAAAGCATTTTCTGTTTCG TACATATGTATCTTTGGGTATTTCTGTACTGTCTAGTGAGAACATCTTAT CTGGTAGATTGGGTTGAGCTAACCTGTTTTGCGATTAATTGCTAAATTCA CCTTTTTATTGACAATTTCACACATTAAGTGGTGCAATTTCACTTGACCA TTTTGTTACCATGTCTCACTGCCCTCCGTTCATTAGGCCCTTAAGTAAGA ACTGCATTAAACACAGTAGTTCACCTGGAGAAATGTGAGACCAGATATAA GGTGTTCGCAATGCAAGAGAAGACCACTTAATGATACCAATTTTTTTTTG GTGATATCTTCAACATTCATCTATAATACTTAATGCTATCTATTCCACCA CATTGCAGCGGGTGTAAAGATCACCCCTTCACCAAGGAATAGATAACAGA AAGTGTCAAAAAAAAAGGAAGAGATAACAGGAAACAGCAGAAATCAGTAT ACAACTGTAGCCCTTAACATTCAGAAAAAAAATACTACTATTAGTTCAAC AGAAATTAGCATGACTTCAGGTTTTTATGGTACACTAGTAACTAGTTGTA GCAAACACACTCCATATATAACCACAACATGGGTTTTAAAGACTTACTAT GCCAACATAGTAGAACACAAATGTGACAATCAAAGATGAAGCAGTATTAT ACACTGGTTTCTACTGTTTTCTGTTAAAACTCTATGCACGTTTTTTCTGC AATTCTTGGCCAGAACCTGCTGGTAATTTTCCTAATGCCTAGAGGCCACA TTGGGATTTGGGAGCCATCTGGAGGCCGACACACACTTATTTTGACCCAG AGCAAAATCAACCCGGTGTCACTGTATAAATCACACGGTTTTTTCACTAG AGCTGGGGGTGTCATACACTAGAAATACACACCCTCCGGTCCATAATAAG TGTCGCTAATTTAGCACAAAGTTGTACTAAATCAACGACACTTTTTATGG ATCGGAGGGAGTATAAAATACACCAAAGAAAATGGATTTTACCCGGTGTC CTGTGACACCTGCTAGCTTAACCTGGGTACGCCCCTGCTTATGTACATCG CTTGTTCTTCTATTTATCTTTTGCATGCAGCTCTGATGAGTGTATCAGGA AGTAGCTTCAAAATAGTCAAGAATTTCTCTAGTCAAATCCTTGTCTTGTA ATTTACCAAGCTTTTGAATTCCTCCCATTTTCAGATCCTTGTCTTGTAAT TTGCTAGCTTTCTGAAATCCTCCCATTTTTCCGACGCTTCTATTTTTTTA CATCAAGTATAATCTCATTCTGGACATTCTTCATTTTAAGCCATCACTTA AAATGACAACCACGTGCCAAATTCCGTATCCAAACAAGATGCTAACTTAC ATTAGCTTTCGTTATTACCTGATTTGTTGATTGTACTATTGACACCTCGT TCATTCTTAACTAATTTCCTCTCTTGTTAGATCATACGTGGCAGACTAAT ATTTGCGGAGATCGCGAAGGAGCACAGTACTGGATAGGTCAGATTTTGTC TGCACAATTGCTGAAGTACCTCATGTTTCATGAGCTTAAGACTGAACAAT GACAGTATTCTTGTCCTGTTACAGGAGTTTTGCATCTTATTTATCGCTGG AGTGCTGATGACCAAATTCATTACTGCCGAGGAAAAGGTGTAGGTGAATT TGTCTGGGTGTACTTGAATTCAGCAAAAGGGACTTGGGTGAACTAGTTAT GATTCAAAACGTTTTTAATATAATTTATGGCCTGCACCTTTCTCGACTCC TGTCTTGCTCCTGACGGCAATTTGGGCGAGCCCATACCTTGAACTCTTGA TATCTGTTAGCAAATTGCATATTGATGTAAATGCGAATATACGATGAACT GAAAAATTATATGGTGATCTAAATATCGAAAATCTCTTTGCATAAGCGAG TATGTGGCTGCATTAAGTTCGTCTCCGTTTTGAGCTTTCCCGAGTAGTAG TCGCTAAGCATCCAAAACAGAATGGCTGCAAGTTTTCTTTTTTGACGGTC ACCGGGGGAGGGATCCTCCACCGAAAATTTTCATATATGTAAAATGGACC AAATGTCCATATAGTTGCTCTCCACAACTTTGCATCTTCACGGCACATCC GGAGCAGTAAGGGGATGTTGGGGAGCTGTTCTCTGAATGCCACCGCGTTC GGTGCTTCCACAGGTTCCAGCAGCACAGCAGGGTGAAGGTGGAGGCAGTA GCCCTAGGTTCCGCTTTGGCAGTGGCATTAGGCGCACATGTTACATCTGA ATTTGGTTGGGAGAGTTGGACTGGCAACTTAAAACCGTCTCCAAAATCCC AACTGTCATAGGACTAGTTTCACCTGTTCTGTCAAGAACACGCTCACAAG CTCAAACCAGCCATTTACTCAAGGGTTTGCTCCACGAGTGTCCGGTCCTG GAACCACGCTGATTTCATATCATGTTGTTTCTTTGGAATCCTTGGTTAAT TATATTTGCACAATGATCTACGACCAGTCGACCACCCAGAGCAGAGTGTA CAGATCCTTGTGGGCGCAAGCGCAATGGCAGCTTCCAGCATCTATCAGAT ATATACTCCTTTAGTACCAGGAGCAGCGCTCACTAGTTCAGTTAACCTTT TGCTGCAATTCCGTGAAGCTCTCTTAATGAACCATCAAGATGTGAAAATG AGAGCACTAACTTTATTTGTTCAGAGGGATGGATTCCTAATGAGTAAATG CGGAGCTTATAATCCCAGTTAATGCAGAAAGTTGGGCAAAAAACACAACA TATCGCCCACAGTGCCTACTCAAACCGTGAAACAAACCAACGCAAATAAC CATCAGATCACACAACGACCGCCACCTCCTAACCTAACCTGAGATTTTTT CGCCAATATTGTTCGTACACAAACATCGAAGACTGAACTACCATGCGCTG CCTATGGAACACGAGTGACAGTAACAGCGGGACACGGTCAGCTCCTGCAG CACGCCCCAGCTGCCATCATCATCATCGACGCCCCCAACAAGCTGCGCGT CGTCATCCTCTTCCTCTTCGACCACGCAGCGTCCCCGAAGGCGTCGCAGC AGGAGGCGGGTGTAGCAGCCGACGAAGTGCCGGCCGGAGAAGCGGCGGAT GAAGTCCGGCGCGGAGACGTGGCGGAGCCAGGGCGACGCAGAGGAGGGAC GTGGGGTAGTCGACGTGGACCAGGATGTGGTGGAGAGGAGGTTGTCGACT GGAACTTTGCCACAGCCCCGTCGCCGCCATGGCCCTACTCGCCGGAGACC AGCCCGCCGTCGGCGTGTCCTCCCTTGCTCTCGGCGTCCTGGCGTCGCTG GAGATGGAGGCCTTCGCATGGTTGCTCCGCCACCGCCCCACCGTCGCCAT GGCCTTCCTTGCCGCCCTGCTCTCGGCGTCCTGCTATCGCTGGAGATGGA GGCCTTCGCCACCGCCCCGCCGCTGCACCTCCCGCCGCCGCGTGCTGCTC GCGTCTTCGTCGCCTGCACCTCCCGTCGTCGCGCCATGCTCCTCGTGCCG CCGCACCCTGCTGCTCGTGCCGCCGCCGTCCATACAGCTCACGCCGTCAC CGCCCACCTCGCCAGAGTCCCCTGGCCATCACCACCGCTTTCAAGGTCGA CTACGCGTGCTACATGCGGTCAGTGGCGGTGCTACAAGCGAGCATTGGTT TTGCTACATGCGTCCGGTGTCGATGCTACCTACGGCTTCTGGTGTTGCTA CCTGCGGCGAGCAGTGCTGCTACATTCAGCGAGAGGCCCTGCTACGCAAG GCGACCGGCCCTGCTACATACAACTTTTGGTGTTGCTACCTGCGGCAAGC GGCGCTGCTACATGACATTTTTTTCTTACAAGTTTTTGCTCCGGCGAAGT CTCCGGCGAAGTCGGCTTTTGCTACATTAGTATAATTATTTTGCTACATC TGTTTTCTGAGTTTGCTACAATAGCGCAAATTTCTTGCTACAAGGGTCTC CGGCGAGATCTCCGGCGAAATTCTCCGGCGAGTCTAAGATGGAGTCAGTT TTGCTACATTAGCACAAATATTATGCTACATAATCTCCGGCAAGGTCTCC GGCGAAGTCTCCGACGAGATCTGTCTTTTTTATTTGTCTCGTGGACGAAC CTTTTTTGCTACAGTGTAGCAAAAGCGGGGCGTATGTAGCAAAAGCGGGT CTGAGTGTAGCAAAAGTGGGATTTGGATGGACACGTGTCAGCACGAGGAC CCGGGGGATCAGAAGTTTTTATCCCCCAGGGGACGCGTAGCACTGTCCAT AGATATATCATAGTCACAGTCCATAGTGTTACCTACACGTTTTGTACTTT TTTATACTTTTCGTACTGGTTGTAAGTTGTGAAGATCTTCGGCTGTGTGC ATCCTAATTATACAGAGGCCGGATGTAAACATTGCTTTGAGTAATAAAAC GCCTATTTCCCCAAATAAAAGCATCTCAGGCTACAAGTGGGCATGCCCGT GGCCACCCACTATCTGCCCACCTTTGTCTATATAATTTTGTTGGGATTGG TGGTTATGTCCGCTGAAATCCGCTAATGTTGGGCGTCCGTCTGCCCGTCT AAAATCTGTCAGTTTCCTCATCCTTACGCAAATAGCCAGCCAGCTTCCTC ACCCTCACGCAAATAGCCAACCAGCTTCCCCAGCTTCACACAAGATCACA GAAAATAGAATTCAACGTCATCACACAATTGGAGCATTCTTACACAGAAA AACCACAATACCGATTGTATTATAATAAGTACAAGCATCACAATATTATT ACAGGAAATGCCTTCAAGTATAAACTTGAAAATACATGAACATAATTTAA ATGACAGTACACAGAAAAGATCAGCTAGCTTCATCACACAAGTTCACTGA AAAATAATCCAGATTCGTCACAGTAGTATGCAAGATCATTCTTTTTCAAA TGTGATGAAACATGAATTTATTACAAGTACACGCGACGACAACCATTGGG CCAAAATAACAGTACATGGATCAAGTTAGTACAGAGAAAATGCCAAAATA ACCGTACATGAATTTATCACTTGCATGTTATTTCTTATCGTGTAGTTGCA TGGTCATAACCTCACCTGACGCTGGAATGATGCCTTGAATAATTGACAAA AATGTTCAACATTCAAACCTTAATCAAGTACAAAGCTCTTGAAAAATAAC AAAGAAAGATCCATTATTGAAACTTTAAGAACATCATGTACCTGGTTCAG TTTAGAATCACAAAATACAGTGTTATATAGATGAACAAGAGAACAAGATG CAAACATACAAGTGTATATAGATGCAATAGAATGTCACAAAAAACATACA AGTGTACTTACTGTCAGGTTTAATCCAGTCTCCATAGCACATCAAAGCCT CAACCGTTTCAGGTACTAGGCTACTCCTGTGGTCTGTAATAACTCTACCA CACCACATGTGCTAAATGCAGATTCAGAGGCAACTGACAATGCCGGAATA GCCAACACATTACGGACAATTTTGCCAAACGTTGGGTACCTTGCAGAATT CACATCCCATCACTTAAGAATGTCAAATTCTGTTGTACGAGGATGGAAGT CGTCCTCTAGGTATCGCAACAGCTCATTGTGACCTTTTGCTTTCTTAAGC TTGACACGATCGTTCCAGTCTGAAAGGTCATCTGCCAAAGAAACTCCCTC TTTATTCCTTTCTTCTTGTGATGCTAAATTGACATCAACTTCCAATTCAA TAGCATACTCTCTAATCAGGGCATTGATAGCTGTCCGAACTTCTTGGATA TGCTTCGGCGCATCAACTCCAAAATATGTCTCCAATCGAATCTCAACCAG TTCCATTTTGAATCTTGGATAAAGTACTTGTGAAACTTATTCTTCATTTC TTTCACCATGATTTTGATTATAGGATTACTGCTCTTTTCTTGTTTATCTA GGATAAGTTTCACACCCCAAATTTCAAAGAAATACCGGTTTGATGTGGTG TAGTTTGATCCTGAAATGACATTGGTGGCATGGCAGAATACTTTAAGAAG CTTACAAATGTCTTCAACCATTTTCCACTCATCGGCTGAAGGAACAAATA TATAACTTGGTTCTTGTTCTTGTAAGGTCTCAAATACTTTCTGAAATGGC AATGTGGACTCGAGCATAAGGTATGTTGAGTTTCATCTTGAAGAGACATC CGGTGTAGGTTGGTGTTTGCATTTTATTCCAGCCTGTGCAACCATCTTGT CAAATTGTTCTTTTTTTGTCCTGGGAACTTCTAATGTATTCTACGCTCTC TCTAATATTGTCCACAACAGACTTTATCTCTTTCACTTTCAATCCATCTT GCACTATTAGGTTTAGAACATGACATGCACAGCGAACGTGGAAGAGTATC CCTTCATCATGGATAAGGCTTCGATCAACAAGGTTTTTTCTAAGATGACT AATCATTTTGGTGTTAACTTCTGCATTATCCATTGTGAAGCTAAAGATTT TATTCTCAATGTTCCAATCACCGAGGCATCATGATCATGAATGTTAGGTT TAACCTTCGCCATCGCGATCGCGGCGTGCCCTCCTCTCGTCGACGGGGAC GGAGCCATGGAAAACGGAGCTGGATCGAGACGGTTTATGTGTGGTGAACT TCGTCACCTTGGATTATTGATCTCTGCAAGTAAATATAGCGCAAAGGGAT GATGAGTTCAGGAACAAAACCAAACTAGCACTAGATAATCCTATTACGAA AATTCTATTGAGGCCTGATGTAAAAGGACTGGGATACATGCGTGACATGA CATACTTTACACAAAACATGCACCATCCCATCACATGAAAGAACAAATAT AAAGGTAGTGCCACTTCAAAAATAATAATTTATTTTTAGATGATATTTTG TGCGAAATTCCACCGACCAATTAAGAATTATCGATGGCGGTGCAAAGAAC TCCAAAAGTAATAAAAATCATAAATACGTCCTTGGACCACCTAGCGACGC CTACAGACACTAGCGCGAGCCGAAGGTACGACGTTGTCCTTACCCCTCCA TCATAGGACCCAGGCAAAACTTGTCGTAATGGAGCTTGTTATAGTAGATA ATCGAGAAGTCGTCCTGCTAAAAACCCAAAGTACCAGAGGACCAGAGCAC AAGAGTAGCAGCCATCGCCAAAAATGACTACCATAGATCGGAAGAGACTG ACCTAAAACCCCACAACGAACACAAAAATCGACCGGATCCTAGGAGATCC ATCGACACTAGAAGCACCACCGGAGCACGGATAGGGCCAGGATGACCTTA TTCTGACTTTAAGATGTAACAGTTGACTCATCATCTCAGAAAAGACACTA AAAACAATCTAAACAACGAACAAGAACCCTCCAGACGGTTATGCTACCAA GTGTCACATGACACCGGGTAAAATATCTTTTCTTTGCTATATTGTATACA TTTGTAGTGTATCACAACCCCCGCTCAAGTGAAAAAATTGTGTGACTCGG TGACATCGGGTTGATTTTTCTCTAGGTCTGCCCTTGACGACAAGGGTGCT TGTCATTTTGCATAATGTCTTGCCATACTGATGGCCTGTTATAAAATTTG TTTGACATGGTACAATTTGTAATTACAACTCTTGTGGCCGTGTACCAAAT TTAGTACGCCACCTGAATAGTTGCCATGCAGTATATTATTGTGCTTATCT GGGCTCTTTATCATCTTGAATGTGTTATTGTGATGAACAATTGTTTTCAT CTCTTTTTGTCTTACTAGAAATTGTTTTGCTTGAGGGATCCCGACCCGAA TAGTTGCCATGGACCTTAGGTACACAACACACAAAAAAGATAGTAACATT GTTGCAGCTATTTACAGTTCACCTCTTTTTTGTCCACACAAAAAATGATA GTAACACACAAAAAAGAATAGTTGCCTTGCTGATTCTGCATACATGGAAT TCCATACAAGGATTTCAACTGACACTGTTCTAATTCTGCAAAGCAGACAC AACACATGACATTATTCTTCATCCTTTTGGATCCTTTATTTCTTCAGGGC TATCATTCTACACAACTGAGGAAGAACTTAAGAACATCTTCTCGCCATTT CGCGCCATTGAGGAAGGTACATATGCTATTTTAGAACTTGTCGGATGCTG TTTACCACAGGAAAGTTGGATATCTTCGTTATTGTTTCCTATTGCTACTT GAAGTTCTTCTGTTGGTTCCATGGAAATATTCAACTCTAATGTTGATTTT TGTTTCTTATTAGCTATAGCTCGGTTAGTGAGAGACAATCAAACTGGAAA GCCCAAGGGATTTTGGTTTTGTGAAATATTCAACAGAAGCAGAGGCACAA AAGGCTGTCAAGGCAATGGATGGACGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.