Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA045812

[Submit comment/correction]

Sequence	AA045812
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA045812
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GTATTATTGAATCCGCTCTAACTTAGACCAATCTTTCAATCCCACATAGT GTCTAGAAGCACGACTCTTGCATGGGAGCCACTTTCTTCCTCTCTCCTAT TTTCTCTGGGAATTCAACACAAATACAGTATTAGTTCTTATAGCCAGCTG ATTTACATTTATTGTACTAGCTCTTAACCAAAGAGATGGCTGCCCAACTC CACTGTATACTACTCCGTCTACTATGTCCTGTCTGCGTCTGCTTACTGAT AGTGTGACTGCGAGTGTGTGACCATATAGAAACCTTGCAAGTTGAAAGTG TCTCACTTTAGTGCACACACTCACTTACGCCCGCATGCTTATATGTGACT GTATTGGGGAAGTTGTATGATCAGCAGCTAGCTCAATTATTGCAAGTACG AAAGAAACACCAAGAGAGACGGTATGGAGGCTCACGGGTCGCAGGAGAAG CCTCGGCATCACTCCCCGCTCAGCTTTGATCACGAGTCCCTCAAGGAGCC GAGGGATCCCAAGAACAGCAAGGGGGGATGGATCACCTTCCCTTTCCTCG CAGGTTCGTCTACTTCTTCTTTTGCGTAGTACGTGCGTGGGCTGTGAAGA ATGAGTCATGTCTACATGTTTGTGTTCCTGTGTGATGTATGCAGTGGCCA TCGTGTGTCTCGGGTTGGCGTCTGGAGGCGCGCTGTCCAACATGGTGGTC TACCTGGTAACGGAGTACAACGTGCCGAGCGTCGACGCCGCGCAGATCTC CACCATCATCTCCGGCTCCATCAGCGTCGCCCCAGTGCTCGGCGCCATCG TCGCTGACGCTTTCTTCGGATCCTACCCCGTGGTCGCGATTGCGATGGCC ATGTCCGTCCTGGTAAGTCTAAGGTTTGCCTCATTGCTCGTGTATATGCA CGCATAGGATGATCTGAGCGCGTCCACATGTATATCTCGGTTCTGACGAC TATATCCACTCACGCGTGCAGTCCATGGTCATGTTCACGCTCACGGCGAG CCTTCGGGGCCTGCGGCCTGCGGCATGCCAGCTTGGCGCCGCCGGCCCAC CGTGCGAGCAGGCCTCGGGCGGCCAGATGGCGGCTCTCTACGCCGGCGTG TTCCTGCTCTGCCTGAGCTCGGCGGGGGCGCGGTTCAACCAGGCCACCAT GGGCGCCAACCAGTTCGACGCCGCCGCCGACCGAGACGTCTTCTTCAACT GGTACTTCATCTTCCTCTACGCTTCTTCCGTGCTTGGCGCCACCGTCATC GTCTACGTCCAGGACACGGTGTCCTGGACTCTGGGCTTCGGCATCTCATG CGCGGCAAGCGTCGTCGGCCTCGCCGCGTTGCTCCTTGGCGCACGATACT ACCGGCAGCCCGCCGCTCAGGGCAGCCCCTTCACGGGGCTCGCCAGGGTG GTCGTTGCCGCCGTGCGAAAGAGAAAGGTCAAAGTTGTCGGATCACAGGA GTTGAAATTTTACAACGGGCTAAGTCCGAGTGATGCTGACAGCAAGACTC ATGACGGCGTCCTGGCTCCAACTCCGAGCGGCAGCTTTAGGTAAGGAAAA TGTTTGCTTGCATTTGTTTATATATATATACGCGAAGTTAAATTAACAGA ATATTTTTTTGCGGGGAGAGTTAAAATTACTATACAATCAGTCATAGTAT AAAGGGAAAATTTGCTAGAGGACACCGTTATTTTTTGGCGTTTGCCAAAA CACACCGCTGGAATGTGTCTTTGCTGAGTACCATTATAATTTCGTGGCAC ATTTGCCAAGACACACTGCATGCCGCAAATGGAAAGTTTGACTAATTTTA TTGGGATGACCATCATATGTCTGGTTTGAACACTTTTTTCTCTAATTCAA ATTCACCAAATCCAGCATGTGCATATACCGAACATGAATTAGAAACTATA CGTAAGTTCACATCAAGTTGGAACATCCAGGCCAAGACGCCATCCATTGC AGCATGCAACATCGTGGTTAAGAAAAAAATCAACGAGGGAATTGGGAAAA AGTTGGATAGTTTTTTCTATCTGAAACATCGTGTATTTCAATTAAAATTC TAGACATATTTGCAACAAGGTAAAAAGGTAATCTAAAACGTCAAACTTTC CATTTTGGACAGTACGGTGTGTTCTAGCAAATTGTCACGAAATAATAATG GTACTGAGCAAAGTCACCACTAGTAGGAAAATGCCCTTTTGTGACCGGTT CCAGAGGGGCTTTGGTACCGGTTTGGCAACCGGTACCAATAAGCCGGGAC TAAATCATCCCCCCTTTAGTACCGGTTCCTTACGAACCGGTATTAAAAGT GCCTCCACGTGGGCACGCATGAGCCAGCGGGGCTGGAGTCTTTGGTACCG GTTTGTAACACGAACCGGTTCCAAACGTGGGGACGTGGCAGAGATTTGGC AGAGAATATAGTGTTTAGGGTTTAGGGTATCGGATCGTTTCATCATACGA GGATCACGTCGATGTGCCTGAAACGCGTTTGGGTTTAGGTAATACATGAA GATCAAGGTGATGCATATCAACTTGGTGCATATATATAAAATATGTAATT GCATAAGATCGCAAATTAAGTAGTACATGCATAGTGGTACTCTTCGGAGC ATACTATATATTACATGTAGCATAGTGGTACTCTCCGAGCCAAACTATAT ATTACATGTAGTACATGCATGGAGATCGATCTTCATGCATAGTGGTACTC TCCGAAATTAGCTATGACGTCCCGAAGGAAAAAATTCCGCCAATTCCTCG CCAATTGCTTTGAAGCGGTGCTCGATTGAGAGCGTGTCCAGCTTTCTTGC CAACTGTAAAAGAATGAGATACAAATAAATACATAAGCTATGCGTATATA TATATATATATCAAATCATAATCAAACAATTATGACTAAAACTCGGCACA ACTGATGGTAACAAAATAAATTTATGAATATTGTTTACGTATCTCTTTAT TTTTTTTATTATTCATTCTCTTGCTGACAATCTTGTGAATATACTCGTAA ACGTAGTATCCACATAGATTAGTCCCCAGTGGTTGTTTCGCGCAGTTTTA TACAAGAATATAATTCAATCAAACAATAATCAAGTATGATAAAGGTGTAT GGATCTTGGTAGTACTACTTACTTTGTTCAAAGGCCATATCAGCTTCGGT TTCCATACACCGGCCGGATCTTCCTCGATGAACGTTTTCCATCGCTTTGA CAATGTTTTAATTTCTTTGCCTGCTGTACCTTTTTTTCAATAAAATTATG AAAACTGACAAGACAAAGTCATCCTAGCACAGAACCAGGTTTGTTGGACG TATGATCACCTAAAGACAGAATAAAGCAATTAAGGCCGCCCATCCACACT AATCTACTGCCAAAACAAAAACTGAACGAACCATACATGAACAAAGCTTT CAGTAACACACAACACCGAACATCTGAAGAACTACAAGTGCCAGAACACC ATTATTATTCATATGCCAATGTGTCCAGCTCGTCAGAAGTCGTCAACGCC TGAAATCCTCATCCGTTCTCCAATAACCAGCATGGAAGCACTCGAGCGGT GCCTGCTGATGGTCGCGCGAAGGAGGGCGCAGTTCTGGGAGGGCAGGACA GAACGAGCAGGACAAGGGGAGGAGGACGCAGTCTTGGGAGGGCGCCTGTT GATGGTCGCGCGAAGGAGGGCGCGGTTCGCGAGTCATGGCTCTCTAACCG GGAGGAGGGGACAAGGGGAGGAGGCGCGAGAGGACTCACCTGCTTGCCGG CGAGTGGGGGAGCGGCGGCGGCTTGGCGCCGGGGAGCTGTGCCGGGGAGC AGCGCCGGGGGCCTGGCTGCGGCGACGGCGGCGGCTTGGCGCCGGGGAGC TGTGCCGGGGAGCAGCGCCGGGGGCCTGGCTGCGGCGACGGCGGAGGCTT GGCGCCGGGGAGCCCGGGGGCGTGGCTGCGGCGACGACGGCGGCTTGGCG CCGGGGAGCCCGGGGGCGTGGCGCTGCAGCGACGGCGGCGGACTGCGGGA GATAGAAGCTGTCGATTTAGGCTAGCTTGAGAGTCTGCAAGGAATAAAAG GGCATCAAGACCTTTGGTACCGGTTCTAGCTGTATCAATAATCGTTTTGT ACCGGTTCTCTCCAACAACCGGTATCAATTTTTTTTCTGTTTTGCTATTT CTGTCTGTTTCTATTTTTAATGTTCACATATAGTATATATATGACATATT TGCACGTATTTTCAAATTGTGTTCATCTGTAAGCTGATAAAGTACGCGTT TCTTAATATTAAATATTACTAGCCAGGATTGGCGCGGGCGTCACGCTGCT CCCGTGGGCAGGCGATTTTTTTAAAATAATACACTTTTTAAATATTTTTT AATTTATTATACGATTTTTTGAATTTTACAAAACTAGCACGTTGTCGGCT TGAACGAAGTCGATTAGACTAATCGACGTGGCCCCGACTGCTTCACACGT CGACGCTCAATCGGATTGCTCCAAGCCGACTAGCTCAATAGGCCTCGCCC AGGCCGACAAAATGCTACTTTTGTAAAATTTAAAAAACGTGTAATAAATC TAAAAAATATTTAAAAATTCGTATTTGAAAAAGGACATATCACGGAGTTT CGTGAAAGATCGGGCCATCCCCGAGGTTGCCCCTCAACACAAATAGCCTC TTGGAAGCACGGACAATATTCACGAAGAAATGTTTAATACATTATTACAC ATCACCAACAACATCCCGGCCTATCTAGTCTTCTGATTTTTCTTTGTATG TTTCCCTTTCTTCTCATTGTGACGCAACCATGGACAATCTTCATTATTTA ACACGATGCTTGGATCATTTTTCACCTTGAAGTGTGGAATATCATCAAAC TTATTATAATCTTCTGACATGTCTATCTTGTCCTCTACTCCCACGATGTT TCTTTTTCCGGAAAGAACTGTATGGCGCTTTGGCTCGTCGTATGACGTGT CCTCTTGCCTTTCTTTTCTTTTTTTTGGTTTGGTATACATGTCCTTGACA TAAAAAACCTGAGACACTTCACTGGCTAGGACGAATGATTCGGTGTCGTA CCCTAGATTCTTAAGATCCACTGTAGTCATTCCGTACCGCGGGTCTACCT GTACCCCGTCTTTCAGGTTGAACCATTTGCACCGAAACAAAGGGACATTG AAAGTAGGTCCATAGTCAAGTTCCCATATCTCCTCTATGTACCCATAATA TGTGACCTTCTTCCCATTATCCTCTGCTGCGTCAAAGCGAACACCACTAT TTTGGCTGGTGCTCTTTTTATCTTGGGCGATCGTGTAAAATGTATTTACA ATTATCTCGTACCCTTGAAAAGTCGATATAGTCGAAGATGGTTGCTTGGC CAACAAGTATAGCTGTTATTCATCAGTGACATTAATGAGACGTGTTTGCA ACCAACCGCCAAAAGTCTTCATGTGTTCTCCACCAATCCAATCTTCACGC TGCTCCGGGTATTCCGAGCGTAAAATATTATTGTGTTCCACTATATACGG AGCCACCAAGCTGGAATTATGTAAAACTGTGTAGTGTGCTTGAGTGAAAG AATGTCCGTCCATACACATTGTTGCTTTCTTTCCTAGCGTGGCGCGATTC AGGAACACCGATCGGCTTAAGGTCAGGAATAAAGTCAACACAAAACTCAA TGACCTCCTCTGTTCCATAGCCCTTGGAGATGCTTCCTTCTGGCCTAGCA CGATTATGAACGTATTTCTTTAATACTCCCATGAATCTCTCAAAGGGGAA CATGTTGTGTAGAAATACAGGACCGAGAACGCCAATCTCTTTGACCAGGT GAACGAGGAGATGCGTCATAATATTAAAGAGGGATGGTAGGAACACCAAC TCGAAGCTAACTAGACATTGCACCACATCCTTCTGTAAATTTTATAGAGT TAGTGGATTGATCACCTTTTGAGAAATTGCATTGAGGAACGCACATAGCT TCACAATGGGTACTCAAGCATTTTCTGGCAGAAGCCCCATCAGTGCAACC GGAAGTAATTGTGTCATAATCACGTGTCATTCACGAGACTTTAGGTTTTG AAACTTTTTCTCTAACATGTTTATTATTCCCTTTATATTCGACGAGAATC CAGACGGGACCTTAATGCTACTCAGGACTTTAAAAAAGATCTCCTTCTCT TCTTTGGTAAGAGCGTAGCTGACAGTACCTTGATACTTCTCTGGATTCAG GTTATTTCCTTCGTGGATACATTGCTGGTCCTGCCGTGCATCCGGTGTAT CTTTTGTTTTCCCATACACGCCCAAGAAGTTTAGCAGGTTCACGCAAAGA TTTTTCGTCACGTGCATCACATCGATTGCAGAGTGAACCTCTAGGATTTT CCAATAGGGTAGCTCCCAAAATATAAACATCTTCTTCCACATGGGTACGT GTCCGTCAACATTATTCGGAACAGATTTTCCGCCAGGACCCTTTCCAAAG ATCACTTTTAAATCCTTGACCATATCATATATAACATCCTCAGTAGGGCG GGTAGGCTTTGTTCGGTTATCTGCCTCACCTCTGAAATGCTTTCATCTCT TTCTTACGTGATGTTGTTTTGGAAGAAATCGACGATGCCCCAGGTACACA TTCTTGTTTCCCAAATATATACTGTCAGTCTCACCTAAACAGTGTGTGCA TGCATTGTATCTCTTGTTTGACTGTCCTGAAATGTTACTAAGAGCAGGCC AATCATTGATGGTTACAAACAACAACGCTCGTAGGTTAAATTCCTTTTGT TCGTGCTCATCCCACATAGGTACACCTTCTTCACGCCACAACTGTAAAAG TTCTTCAACCAATGGCCTTAGATACACATCAATGTCATTGCCGGGTTGCC TCGGGCCTTGGATGAGAACTGGCATCATAATGAACTTTCTCTTCATGCAC AACCAAGGAGAAAGGTTATAGAAACATAGAGTCACTGGCCAGGTACAATA GATTGTTGTGATCCTCTAACATTTTCTCCAACTTCAACCTCTCCTTTTCA CTTCCGCAGTTTATCTTCGCATCAAAAATGGCTTGACCCAAATCGTCATC GGGCTCATCAAAAATGGGCTCATCAAAAATGGGCTCTTCTTCAGATTCGT CTCCCCCATTCTACTATCACCGTCTTCAGTGAACATAGGATAGTTGTCAT TATCCTCTTCTTCGTTGTCTTCTATTATAACCCCTCTTTCTCCATGCTTG GTCCAACAATTATAGCCGGGCATGAAACCGTTCTCAAGCAGGTGGACGTG AAGGGTTTTTGAAGTAGAGTAATCCTTCGTATTCTTACATGAACTACATG GACAACAAATGAAACCATTTGATCGCCTGTTTGCCTCAGCCACGTTGAGA AAATAATGCATGCCAGTAATGAACTCGGGATGACATCGGTCACCGTACAT CCATTGTCGATTCATCTGCATTCTATAATTATATCAAAAATCATTAATTA CTCAACATCATGAATATATGAGTGACCAAATTAATTAATATTCAAGTTTA TCATCACATAAAACTAAGTGTTTTTATAAAAAAAAGAGACTCACCGAGGT TGTGCCGGCTAGGGGACGACGCTGGCGACGGCTATGAGGACGGGGACGAT ACTAAAACCAAAAAATCATACTTCAATTTGAGCTCAAATTGCATATAAAA AGAATGAAATCCCTAACTTAGGCATTTCATCGAACACCTTGCTAGCACTA GAAAAAATGATACGAGTTAGACTAGCAAAGAAATAAGCTAAATACGGGTG GCTCGCGTGAAGAAATAGATCTGGAGACCCTTTAGTACCGGTTCTTTATA TGAACCGATACTAAAGGTGCAACGCTGGACCCACCTCTGTATCAAATTTG GCGCGAAACCCTTTAGTACCGGTTCGTAACACGAACCGGTACTATACAGC CTAAACGAACCGGTACTAAGGTTTGCCGGTGACCTGAGCAGTTAAACCGG TACTAATACAGCCTTTAGTACCGGTTTTTAAGAAACCGGTACTAAATGTC AAATCCTTTGGCTAGTTTTCTACTAGTGCACATTCCAACAGTGTGTTTTA GCAAACGCCGGAAAATAACAGTGTCCTCTAGCAAATTTTCTCTAGTATAA ATTACTTAGTAGAAGATTATGTGAATAAACCTATTCTGTTTTTAGTAAAG GATATTGTTTTATTAATTCACTATCCATCATATAGAAGAAATCGACACAA CTACCAACAGTCAAGAACCTTGATTAAACTAACGGTTTACATCAATGTTC TTTAAAGTCGATCGTTTTCTATAGCATCCCCTTTTATATCATGATTTTTA AATGGTACTTTTGGTAAAGAAGCCTCGAATTACCAGCCTCGAATTTGTCC TACATAAGTAATCCTAATTTATGTTCGTCGTTTCAGTTATAGATTGAATT TGGCATAAATCAAATTGTCTAACAGATTAGCTATTAATGGAGTTCAAATT ATCGTTGATCAAAAACAAAAACTGATTCATATATTCATTTCTCCAAATTT TATTTCCTAGGAGATGTATGATGATTTTTCCTTAAAAAAAGAGATGTATG ATGATTTTATAATAAAATTGTACTACAATATTACTTTGAACGCACTATTG AAGTACTTATGTACATTTGCTCAATTAATGACGAGCATCTGCCCCAAAGA GGAAAAGCTACACCATATATAGCTAGACGTACCTACTCTGTCGGTCCAGA TCTGATACCACTAAAATTCAACCTTATCAATAGTTAGTCCTTTGTTCTTG AAGTTTCCTTTTAGGCCGTTTGGAATGGTTGTAAACGCACCGTCGTCTAG ATGCCAGACAAAGTATATATTCTTTCCAAGCAGCCCCTTAATAGGTTACA TGCTGGGGTACACGATTTAAGATTCGCAAAAAAGGGATATATTCCTGTCA TTTGCCCTCTCTTCCCCCACGATAGTATCATGTTCCGACGATCTTGCTTT CTACCACGTTTACTGAGAATAAATGTGATTGGTACTGTTCGCTTTCCATG TCTTTTTAATTTGACATTGCTGACTATACGAAGTATGCATAAAAATCTTA TTGGACCGATTGGCATACAAAGTTGAAAGAGATTTGCCTAATGCATAGAG CACATAAGTAAAATTCATCTGAATTACTATCTTACAAATCAAAAGGTCCA CATATTGCACCTTACTAAAATTAATTAGAATCCTTGAATAATTGTTTGTA CTATCCAGGTCACTAGTCTGGCATAATTGTTTTTATATACTATCCAACTC ACTATTTGGAATAAATTGTACTAGTATTCGGATGAGTAAAAATAACAGGG CAGTTGAATGAATAATTTTTTAGAGACGTGTATTTAGAACCAACATGTTT AGTGCAAATTAGTCGCACCTACAGACGTCACAATATTTTGTTTCCAGGAA TCCAGGATAGTAGCAGGTTAGAGCATATAAAAATGAAAGCATCACAGCAC ACGACTCTCGGCCCTATAGCGATTGATTTTTGATAAACAAAAATAAGATT CATGTTAAGATGGATAAAAAGAACGAATCGTACGTCGCAACTAATAAGTG GGACTCGTGTGTGTATACTTGGTTGATATTGTATGATGTGTATACAAACA ATGACATCCACTATTTCATCGCGTGCAGCTTCCTGAACCGTGCTGCGTTG ATCACCGACGGCGACGTGGATGCGGCGGACTGTTCCGTGGTGCGACCGTG GCGCATCTGCACAGTGGAGCAGGTGGAGGACTTGAAGACGGTGCTGCGCA TCCTGCCGCTCTGGAGCGCGGCCATCGTCCTCAGTATTTCCATCGGCGTG CAGATCAACTTCACCGTCCTTCAGGCGCTCGTGATGGACCGCGCCGTCGG CCGCTTCAACGTGCCGGCGGGCTCCATGATCGTCGCCAGCCTACTCTCCG TCGTCATCTTCCTCGGCCTCCTCGACCGCATCCTCCTCCCGCTCTGGAAG CGGCTCACCGGGCACACCCCGACGCCGCTGCAGCAAGTCGGCGTGGGCCA CTTCCTCACCGTGCTGAGCATGGCCGCCTCTGCCATCGTCGAACGCCAGC GCACCGCCACCGTACGCGCGCGCGGAGAGGAGGGCAACCCGACGTGGGTG TCGCCGCTGTCCGCGATGTGGCTTGTCCTGCCGTTCGCCGTGTCCGGGGC GGGCGAGGCGTTCCATTTCCCGGCGCAGGTGACGCTGTACTACCAGGAGT TCCCTCCACCGCTAAAGAACACCGCCACGGGCATGATGGCCATGATCGTC GCGCTCGGCTTCTACCTCAGCACCGCCCTCATCAATATTGTCCAGCGCGC CACGACGTGGCTGCCGGACAACATGAACGCGTCCAGGTTGGAGAACCTCT ACTGGCTGCTCACTGCGATGGTCGCTGTCAACTTCGCGTACTTCCTTACA TGCGCCAAGTTGTACAGGTATCAGAACATTGGGAAGTAGCTCGGGAGACA ACACGTACTACTTGTTGCGCTGCTTGTAGTGTGCTGATGGGTGAACGCAT GCCTCTTGTATGTTAACATGACGAATAAGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.