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GrainGenes Sequence Report: AA040832

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Sequence
AA040832
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA040832
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGATGTGCTTGTCCAAAGATCTGATGATGGGGTCAGCATTCGCTGCTCT
TGGCACTGTATTATTTGTGTGTTTCTTCTATGCCGCTATTGTGTCCAAGC
TGCTTCCACCATATGAGAAGCGGCTTTTGTCTGTTATCCAAAATGATAGG
TAAGGAATCTTAAACCAGAATAGGTGGTCATAAAATTGTAGGGTTTCGTA
GCATGGAAAACAAAAAATTTCTACCGCATACAAACAAACAAGCCAAGATC
TATCTACTAGATTGTAGCAACGAGTCGATAGAATAACTCACCCTCGAAGA
TTCCAAAGTGTTTAACGAGAGCGGATTCTCGTGGGTGATGTAGTCGTACT
CTTCCCGATCTCAAGATCGCGTAGACGATCCTTCCGGCGATGCGTTCCGG
CAGCGCTCCCGCAGTCGGTCACACGTTCGGTACTCGACGAAGACCTTCCT
CTCCCTTGTTCCAGCAGGCAGCGGAGGTTGTAGCACTCTCCTCGCGATTC
CGGCAGCACAACGGCGTGGTACCGGAAGTAGAGGGGAGATCTCGCAGGGC
TTCGCCTTAAGCCGGAGCGAGTATGGTGGAGTATGAGAGAGTCCTCGGTG
TTCTAGGGTTTAGATACACCAAGGAGGGGACAAGCTGGCGACTAGGGTTT
AGCTAGGCGGCGGCGAGTTGATGCCCTAGGGGCCGGCGGCGGCTTGGAGG
CGGCGGCGGCTTGGGGCTAGGGTTTAGAGGAGAGGATCTTGTGTGTCAAG
GAGGGGAGCCCTGCCCCTCCTTATATAGGTGGAGGGGGGCGGCCGGCCAA
GGGGAGGGAGGGGAGTCCCTCCCCAACTCGGCTTGGGTGGGCGCCGCCGG
TTGGAGGAGGGATTCCCTCCCCAACTCGGTTTCCCACTCCTCCTCCTCTT
TCCAAAACTTGCCGTTTGACTTTCAAACTAGCCGTTTGACTTTTCAATTT
AGGATTTGAATAAACCCTTTATTTTGGACAGCGAAGACACTTAGTACATG
ATGCAATCATTCTAACTTGCAATGACACATTCATGTACCCCTTCCCCTCC
GGAGTGTCGGACATTCCGGAACCTTCTAGAACATTCCCGATGAAAACACC
GGAACCATTCTCCAACTCCGAAACGGGACTTTCCTTATATGAATCTTATT
CTCCGGACCATTCCGGATCTCCTCGTGATATCCCGGATCCCATCCGAGAC
TCCGAACAACATTCGGTCTCTTTCTCGTCATTCCATAACTACTCAAACAA
CGTCGAATCCTTAAGTGTGTCTCCCTACGGTTCGTGAATTATGCGGACAT
GATCGAGACACTTCTCCGAACAATAACCAATAGAGGAATCTGGAAATTCA
TATGGCTCCCACATATTTCTACGATTACTTTGCGATCGAATGAACCACTT
ACATACGATACCAATTTCCCTTTATCTCACGATACTTTACTTACCCGAGG
TTATGATTGTCGGTATCTCTGCATACCTAGTTCAACCTCGTTACCGATAA
GTACTCTTTTCTCGTTCCCGTGATATGTGATCCCTTGTGAGCCAGTCACA
TGCTTGCGAGCTAATTGGATGACATTCCACCGAGAGGGCCCAGAGTATAT
CTATCCGTCATATGGATGGACAAATCCCACTCTTGATCCATGTGTCTCAA
CCGATACTTTCCGAACACTCAATGCCACCTTTATAGCCACCCAGTTACGG
TGTGGTTTTTGATGTCATCAAAGCATCCATCCGGTAAAGGTGATATGCAT
GATCTCATGGTCAAAGGAATTAGATTACTATGTATCAGAAAGCATATAGC
ACTTGAACTATTAAAATGACTTGATCTTTATGCTACGCTTATCTATAGGA
GTATGTCCATCATATTATTCTCCTAACGATATGATCTTGTTGTTAATAAC
ATCTCAATGTTCATGATAGGGAAACCACAATCATCTATTAACCAACAAGC
TGGTATTATATAGAGGCTTTACCAGGGACTCTTATTTTAGTTTACAAATC
ACACAAGTATCAATGTTTCCTTGTTAATACTATTATAGCATGAATGTAAA
CATTTATCATAAACACAAAGATATAATAATAACTACATTTATTATTGCCT
CTAGGGCATATCTCCAACAGTCTCCCACTTGCACTAGAGTCATCTAATCT
AGATTACATGGTAATATACCGAACACCCATGGCAGTTTGGTGCTGGTCAT
GTTTTGCCTTTGGGAGAGGTTTAGTCAACGGATCCGACACATTCAGATCT
GTGTGTACTTTGCAAATCTTTATATCCCCATCCTGGATATGTTCTCGAAT
AACGTGAAAATGTAGCTTGATATGCTTCAGCTTCTTGTGTGACCTTGGTT
CTTGCACATTGGCTATGGCGCCCATGTTATCACAGTAGATAGACATTGGG
TCCAGCGCACTAGGAACCACACCCAGTTCTGTAATGAACTCTTTCATCCA
TATCGCTTCTTGTGAAGCCTCCGAAGCAGCCATGTATTCCGATTCAGTTG
AAGATCTCGCCACAACGCTTTGCTTTGCACTCCTCCAGCTAACTGCTGCA
CCATTCAAAATAAATACGTATCCAGATTGTGATTTGGAATCATCCGGATC
GGTGTTCCAACTAGCATCGGTGTAACCATTAACAACGAGCTGTTCATCAC
CTCCATAAGAAAGAACCATATCCTTAGTTCTTCTCAAGTACTTAAGGATG
TTTTTGACCGATGTCCAATGATCCACTCCTGGATCACTTTGATATCTGCT
AGTTAAACTAACAGCATATGCAATGTCGGGTCTAGTACATAGCATGGCAT
ACATTAGAGATCCTATGGCTGAGGCATAGGGAGTCTTACTCATCCTTTCT
CTATCTTCTGCCGATGTCGGACTTTGAGTTTTACTCAAGGCCGTATTGGG
CAACATGGGTAAGAACCCTTTCTTGCTATCTTCCATTCCAAACCTCTTTA
GAACTTTGTCCAAATATGTACTCTGTGACAATGATATTTGGCGTTTCGAT
CTATCTCTATAAATCTTTATGCCTAATATGTAAGCTGCTTCGCCAAGATC
CTTCATTGAAAAACTATTATTCAAATATTCCTTGACACTATTAAGAAGGT
CTACATCATTCCCAATCAACAATATGTCATCTACATATAGTATTAAGAAT
GCTACAGAGCTCCCACTCACTTTCTTGTAAATACAAGCTTCTCCATAAGT
TTGTATAAAACCAAAACTTTTGATCACCTTAGCAAAACGTTGATTCCAAC
TTCGGGATGCTTGCTTCAATCCATAGATGGACCGTTGAAGTTTGCATACC
TTGTTAGCATCTTTAGGATCGACAAAACCTTTGGGTTGCATCATATACAA
CTCTTCATCAATGTCTCCATTGAGGAATGCTGTTTTGACATCCATCTGCC
ATATCTCATAATCGTAATATGCAGCGATTGCTAACATAATCCTCACTGAC
TTTAGCTTCGCTACCGGTGAGAAAGTCTCATCGTAGTCAACTCCTTGAAT
TTGTCGAAACCCTTTTGCGACAAGTAGAGCTTTATAGACAGTAACATTAC
CATTAGCATCTGTTTTCTTCTTGAAAATCCATTTGTTCTCGACAGCCTTC
CGGCCACCCGGTAAGTCCACCAAAGTCCACACTTGGTTTTCGTACATGGA
TCAAATCTCGGATTTCATGGCTTCTTGCCATTTATTGGAATCTGGGCTCA
TCATCGCTTCCTCATATGTCTCAGGGTCATCGGTGTTGTCCACCAACATG
ACACTCATAACGGGACCATACCAATCTGGAGTGGTACGAGTTCTCGTGAC
CTCCGAGGCTCTGTAGCAACTTCAACCGAAGTTTCATGATCATCATCATT
AGCTTCCTCTCTAATTGGTGCAGGCATCACAGGAACTTCTTCCGGTGCTG
CGCTACTCACAATTTCGAGAGAAGGTTCGACAACCTCGTCGAGTTCTACT
TTCCTTCCAGTCACTTCTTTCGAGAGAAATTCCTTCTCTAGAAAGGATCC
ATTCTTGGCAACGAAGATTTTGCCTTCGGATCTATGATAGAAGGTATACC
CAATAGTTTCCTTTGGGTATCCTATGAAGACGCATTTTTCCGCTTTGGGT
TCAAGCTTGTCCGGCTGTAACTTCTTTACATAGGCTTCGCAACCCCAAAC
TTTAAGGAACGACAATTTAGGTTTCTTCCCAAACCATAATTCATACGGTG
TCGTTTCAACGGATTTAGATGGTGCCCTATTTAAAGTGAATGCGGCTATT
TCTAATGCATAACCCCAAAATGATAGCGGTAAATCTGTAAGCGACATCAT
AGAACGAACCATATCTAAGAGAGTTCGATTACGACGTTCGGACACACCAT
TACGCTGTGGTGTTCCCGGCGGTGTCAACTGCGAAAGTATTCCGCATTTC
TTCAAATGCTCGCCAAACTCGTAACTTAGATATTCACCTCCACGATCAGA
ACGTAGAAATTTAATCTTCTTGTTACGTTGATTCTCTACCTCACTTTGAA
AATTCCTTAAACTTCTCCAAAGTTTCGGACTTATGTTTCATGAAATAGAT
ATACCCATATCTACTCAAGTCATCCGTGAAGGTAAGAACATAACGATAAC
CACCGCGCGATGCTACACTCATTGGACCACACACATCGGTATGTATGATT
TCCAATAAGTCTGTAGCTCGCTCCATCATACCAGAAAATGGAGTCTTAGT
CATTTTACCCATCAGACATGCTTCGCATCTATCAAGTGATTCGAAATCAA
GTGATTCAAGAAGTCCATCAGAATGGAGTTTCTTCATACGTTTCACTCCA
ATGTGACCAAGACGACAGTGCCACATATAGGTCGAATTATCGTTTGATTT
CAAACGTTTAGCCTCAATGTTGTTGATATGTGTATTTCCACTATCGAGAT
TCAATAAGAATAGACCATCTATCAAAGGTGCATGTGCATAAAACATATTA
CTCATATAAATCGAACAACCATTATTCTCGGACTTAAACAAGTAACTGTC
TCGCAATAAACAAGATCCCGATATAATGTTCATGCTCAACGCAGGCACCA
AATAACAATTATTTAAGTATAAAACTAATCCCGATGGTATATGAAGGGGT
AGCGTGCCGACCGCGATCACATGAACCTTTGATTCGTTTCCCACGCGCAT
CGTCACCTCGTTCTTCGCTAGCTTCCGTTTATTCTGCAGCACCTGTTTCG
AGTTACAAATATGAGCAACCGAACCAGTATCAAATACCCAGGCACTACTA
CGAGTACTAGTGAGATACACATCAATAACATGTATATCAGATATACCTTT
CTTCTTGATGTTGCCGTTCTTCAAATCCGCCAAGTACTTTGGGTAATTCC
GCTTCCAGTGACCTTCTCCCTTGTAGTAAAAGCACTCAGTATCAGGCTTA
GGTCCAGCCTTGGTCTTCTTCGTCGGCGCGGTAACTTTCTTACCACCCTT
CTTGAAGTGTCCCTTCTGCTTAGACTTGCCTTTCTTGAATTTGGTGGTCT
TATTGACCAACAACACTTGGTGCTCTTTCTTGATCTCCACTTCTGCAGAT
TTCAACATGGCAAAGAGTTCTGGCAACGTCTTGTTCATGTTCTGCATGTT
GTAGTTCATCACAAAGTTCTTGTAACTTGGTGGTAGTGATTGGAGGACAC
GGTAAATCCCCAAAGCATTAGGAATCACAATACCCAAGCTTTGAAGTTTG
TTTGCGTGCCCAGACATCTTAAGCACATGCTCACTGACGGAGCTGCCCTC
TTCCATCTTGCAGTTAAAGAACTTTTCAGAAGCCTCATAGCTTTCAATTG
CCGCATGAGTCTCAAAGATCAATTTGAGATCCTCGACAATATCATATGGG
TCTGAATTCTCAAACCTTTTCTGAAGCTCCGATTCTAAACCATACAAGAT
AGCACACTGAACTATGGAGTACTGAGTCTTCCGAGTGAGGTAAACATTCT
TTACTTCATCGGAAGCATCAGCTGCATGTGGGTCACCCAGCGGTGCATCC
AGCACATAGGTCAAATTACTAGCTGTGAGGACAATCCTCAAATTGCGGAA
CCAATCCGCGAAGTTGCTTCCATTGTTTTTCAACTTTTCTTTCTCTAGGA
ACGCATTAAAATTGATGGTAGGGGCTGCCATTGATCTACAACATATTTGC
AATAGTTTAGACTAAGTTTATGACAAATTGAGTTCAAATTAATAATAAAA
TTAATCTAGGTGAACTCCCACTCAAAACAATATCCCTCACATTGTTTTAG
TGATCACACGAACCAAATCCACCACATCAACACCGATCATCACGAGAGTT
GATATAGTTTCAATGGCGAACAATCAACATGTTCATCATATCTACTATAT
GATTCATGCTTTACCTTTCGGTGATCCGTGTTCCGAGACCATGTCTGTAC
ATGCTAGGCTCGTCAAGATCAAACCTTAGTTTTCGCATGAGCAAATCTGG
CTTGCTCACGTTGTATACACTTGCAGAATCTAACACACCCGATCATCACG
TGGTGCTTCGAAACAACAAGCTTTAGCAACGGTGCTAACTAAGGGTGAAC
ACTTTATGACTTGAAATTCATGTGCATGAGGGATCATCTTATAATGCTAC
CGTCGTCTACTAAGCAATACAAGATGCATAAAGGATTAACATCACATGCA
ATTCATAATATGTGATATGATATGGCCTTTCTTCTTTGTGCTTCCGATCT
CCATCTTCTAGCACGACCATGATCTCCATCATCACCGGCATTGCATCAAG
GTCAATGACGCTTCTCCATGGTTGTCGTCCACCGGCTTCAACTATTACAA
CTACTTTGAATAGACACGCGGGTCTTAACATAAATTAAAGACAACCATAT
GGCTCCTGCCGGTTGCCAACTTACAATAAGGAACATTGCATACATCAAAT
ATAATCACAATCATGGCCATATCACATCACAGCACACCCCTGCAAAACAA
AGTTAGACGCCTCTACTTTCTTTGCATGTTTTACGTGGTTTGGGGCTTTC
AATAAGTGTCGTTCTAACTTACGAACAAGAACCACAACATTGATACTAGT
ATTGTTAATCACCCGTTGTAAATTGGATCTTAACTATGCTAGGAGAAACA
GGCACCCGCAAAGCCACTTATGCAATACAAGTTGCATGTCAAGCGTGGAG
CAAGTCTCATGAACGATGTCATGTAAGGTTAGCCCGGGCCGCTTCATCCC
AACATACCGCAAGATGCAAAGTACACAAGACGCAATCGACAATAAAAGCA
TCAACGCCCACAATGACCATTGTGTTCTACTCGTGCAACAGATCTACATA
TGGACACGGCTCTGATACCACTGTAGGGTTTCGTAGCATGGAAAACAAAA
AATTTCTACCGCATACAAACAAACAAGCCAAGATCTATCTACTAGATTGT
AGCAACGAGTCGATGGAATAACTCACCCTCGAAGATTCCAAAGTGTTTAA
CAAGAGCGGATTCTCATGGGTGATGTAGTCGTACTCTTCCCGATCTCAAG
AACGCGTAGACGATCCTTCCGGCGCTGCGTTCCGGCAGCGCTCCCGCAGT
CGGTCACACGTTCGGTACTCGACGAAGACCTTCCTCTCCCTTGTTCCAGC
AGGCAGCGGAGGTTGTAGCACTCTCCTCGCGATTCCGGCAGCACAACGCG
TGGTACCGGAAGTAGAGGGGAGATCTCGCAGGGCTTCGCCTTAAGCCGGA
GCGAGTATGGTGGAGTATGAGAGAGTCCTCAGTGTTCTAGGGTTTAGATA
CACCAAGGAGGGGACAAGCTGGCGACTAGGGTTTAGCTAGGCGGCGGCGA
GTTGATGCCCTAGGGGCCGGCGGCGGCTTGGGGCTAGGGTTTAGAGGAGA
GGATCTTGTGTGTCAAGGAGGGGAGCCCTGCCCCTCCTTATATAGGTGGA
GGGGGGCAGTCGGCCAAGGGGAGGGAGGGGAGTCCCTCCCCAACTCGGCT
TAGGTGGGCGCCGCCGGTTGGAGGAGGGATTCCCTCCCCAACTCGGTTTC
CCACTCCTCCTCTTTCCAAAACTTGTCGTTTGACTTTCAAACTAGCCGTT
TGAATTTTCAATTTAGGATTTGAATAAACCCTTTATTTTGGACAGCGAAG
ACACTTAGTACATGATGCAATCATTCCAACTTGCAATGACACATTCATGT
ACCCCTTCCCCTCCGGAGTGTCGGACATTCCGGAACCTTCTAGAACATTC
CCGATGAAAACACCGGAACCATTCTCCAACTCCGAAACGGGACTTTCCTT
ATATGAATCTTATTCTCCGGACCATTCCGGATCTCCTCGTGATATCCCGG
ATCCCATCCGAGACTCCGAACAACATTCGGTCTCTTTCTCGTCATTCCAT
AACTACTCAAACAACGTCGAATCCTTAAGTGTGTCTCCCTACGGTTCGTG
AATTATGCGGACATGATCGAGACACTTCTCCGAACAATAACCAATAGAGG
AATCTGGAAATTCATATGGCTCCCACATATTTCTACGATTACTTTGCGAT
CGAATGAACCACTTACATACGATACCAATTTCCCTTTGTCTCGCGATACT
TTACTTACCCGAGGTTATGATCGTCGGTATCTCTGCATACCTAGTTCAAC
CTCGTTACCGATAAGTACTCTTTTCTCGTTCCCGTGATATGTGATCCCTT
GTGAGCCAGTCACATGCTTGCGAGCTAATTGGATGACATTCCACCGAGAG
GGCCCAGAGTATATCTATCCGTCATATGGATGGACAAATCCCACTCTTGA
TCCATGTGTCTCAACCGATACTTTCCGAACAGTCAATGCCACCTTTATAG
CCACCCAGTTACGGTGTGGTGTTTGATGTCATCAAAGCATCCATCCGGTA
AAGGTGATATGCATGATCTCATGGTCAAAGGAATTAGATTACTATGTATC
AGAAAGCATATAGCACTTGAACTATTGAAATGACTTGATCTTTATGCTAC
GCTTATCTATAGGAGTATGTCCATCATATCATTCTCCTAACGATATGATC
TTGTTGTTAATAACATCTCAATGTTCATGATAGGGAAACCACAATCATCT
ATTAACCAACAAGCTGGTATTATATAGAGGCTTTACCAGGGACTCTTATT
TTAGTTTACAAATCACACAAGTATCAATGTTTCCTTGTTAATACTATTAT
AGCATGAATGTAAACATTTATCATAAACACAAAGATATAATAATAACTAC
ATTTATTATTGCCTCTAGGGCATATCTCCAACAAAAATTGCTTCATTTTT
TCCTCTGTAAGTTGATATTTGTCTAGTTACCACAAATAACTTAACAATAC
ATGCCTTCCTAGCACCATGTTGTTGTAGCTAAGTTGAATCTAGTTAGAAG
TTAATATCATTTACTTTGTTCTTTCACTTGCTAGGTATTATTGTCTACTC
GTGCCCTTGACACTTCCTGTGATAATTGTGGGTGTCTATCTGCATTGGCT
GAGTATGAAGATGTTCAAGCATGCTTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.