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GrainGenes Sequence Report: AA045980

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Sequence
AA045980
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA045980
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCGTTACCCGCTCAAATCAACGCCCAAGATACAACTTACAATTCGACGGC
CCGAAACTTTAAAGTACCACTCTTTTGCCTTCGACGGTCGTCTTCCTCGC
TGCTTCCCCCATCCCATCTCCACTCCTCTCCCCGATCCAAACCCTAAGCC
GTGGGGATCTGTTCACGCCATGGAAGCGGTGGCCCCGTCGCCACTGCTTC
TTAGACCCCCGGACATCACCCCCGGGCTCCGGCGCTTCCTCGACATCCGC
TTCCGCTCACTGGCCGACCTCGCCGCGGCCGCTGACGTCGAGGCCGAGAT
CCGCGGGCGCTGCGCGGAGCTTGAGTCCTCTGTCGCCGAGATATCTGCCC
GCCTGGCGGATGCATGTGCGTCCTACTCCTCTTCCCTCTATGCCTCTGGC
TCCGCCCTACGCGTCGTCCGTGGTGGCCTCGCCGCCCTGGAAGCCTCCTC
CGCCAAGACAGGTATCTTAAGCAATTGCTCATGGAATTACCAGAATTTTG
GGATTCTCAATTTGATGTTTCCGCTGCAAAGCTTCAATTCTTATTACTGC
GCTTCTCTAGGGGCAAAAGAAGATGTGGAGGCTGGGAACGAGAAGATGCT
GTTTGAGCAACTCACTCCCCTGGCCACCGACGTGGCGAGAGTGGACATGG
TCAGGGATTACGCTGGTGAGTATGTGAACATGCTATATCTGGTTTCTTGC
TCCGCACCGTGCCCAAATTTCGGACAATTTGTTATGCTGCCCATTTTCCA
CTTATGGTGGTTATGTTTGCTTAGGCATAATGTGTCCTAATTCTTAAGTT
GAGATCAGAAGCTGCTCCCTAAAGAGTGCAATTATAGATTGGACTAGTCT
GTTAGGGATGTGAGAAGTATGACTCCTGTTTGGTTTTGAACCAGGCAGAT
TTTTTCGATAAAGGATATTTTATTACTTAAAGAGTTTTAAGCATTACACC
CGGCCTCTGCATAACAATGATGTACACAGCCGATCCAATCCAGAATCCGT
AACAAAAAGAGATAAAAAAGACGAATTACATATCAGAATGAGAAATTGTA
AAATGCCTAAGATGATGGAGGGCCTATCCGGAGATTATGATGCCATCCAT
GCAGGTAAAAGTCCCTCGCCGTATCCTCCAGTCGTGTACACACCTCCGTA
AAGAGGTCATGAAACTCCGCACAATGTAGTGAGGACCATATGAGTAGCGT
TCCTGGTAGATAACCTGCAAAAGAGATGAATTCTTGTATATCGTTAAACA
CTTTATCATTTCTACATAGCTATAGCGACCAAATTAATGCAATAGCTCCC
ACCCTAAGAAGAACTCCGTACTGGTGATCTATACCATGTAGTCAATTCCC
AAAAGTATCGCCAACACTACTCGGTGGATACAAGCCTGAAGTTGCTTGGA
TGACTGACCATATAGAACGAGCAAAATTGCATTGGAAAAACATGTGTTTG
ATTGTCTCATCATGTTGACAAAAAACACATGTTTTACTCCCGTGCCAATT
CCGCTTTTCAAGATTATCTTTAGTAAGAATAATCCCCCGACGAAGATACC
AAGCAAAGATTTTATTCTTTAGAGGTATCTTCATCTTCCAGATTTTCTTA
TTATTATCAACTGGTAAGTCTGTCTGGATCAATGCATTGTACGTAGAAGC
AACCGAGAAATCACCATTCTCAAGGAGATCCCATCGAAATTTATCTTGCC
CAGGTATTAGTTGGACAGAAGCCATGCGCTGAAGCAAGGCATGCCAAGAA
ACAAGTTTAGGACCAAATAAATTTCTCCTGAACGTCACTTTCGGTGGCGA
GGATCCAAAATTGTGGCGATTGTATCACCCTTGTGAGGTACAATGCCATA
CAAAGCAGGATACTGTTCCGGAGTGCTACGTTTCTTAGCCACTTATCCTC
CTAGAAACGAATCTCGGATCCATCCTTAATCAAAAAAGATCCAAAGCGAA
AGAAATTATTTTTTGTTGCCATCAGACCAGCCTAGAAATGCGAATCCCTG
GGTTTCCAAAGAACCTCGGATAAAGCTTTCGAGCCAACATATTTTCGTTT
AAGAAGGTTTTCCCAAACCCCATCCTCAGTTAGCAACTTGAAGATCTATT
TACCAAGAACGGCTATATTTTTGACCTCGAGGTCATGAATACCAAGCCCA
CCCTGGTCTTTAGGGCGGTAAACCACACTCCATTTAACCAGTATATACGA
GTGTGTTTGGATTGTGGCCAAAGTGTACCCTACCAATATTTTGGTCATGA
CCAAAAGGTTGACTCTTGTTTGGATTGTTGCCAACTTTTTTTGCTTGCCA
ATGCTCCACTACCAACTCTAGTTCAAATTTTTAGCCAATGTTGGCCAACT
TGTGGGCAAGCAAAAGGCTCAACCAAAATTTTGGCTAGCCAAATATTTGG
TGGGGTGATCTTGAGCACAAACCAAACACACTCTATTTCTTTTTCTCACT
GTCGCCCTGCCATAAGAATCTTGATCGGAAATAGTCCAATCTTTTTAAGA
CTCCCTTTCGTAGTTGGAAGAAGGAAATCATATATAGTACCATATTGCTT
AGGACTGAATTGATTAGAACCAGCCTTCCTCTTCCTCCTAAGGACAACAA
TTTAACTTTCCAACTGCTCAACCGTGATTGTAGTTTTTCCTCAAGAAGCT
TCCATTCGGCATTTGTAAGTCTTTGATAATGTATCGGAATACTCAAATAC
CTAATAGGAAACTGACGTTGACCGCAACCGAATAAATCAGCATACAGGTT
GGCCTCTTCTTGAGCCTTGCCAAAACAGAACAATTCACTCTTACGGAAGT
GAATTTTCAGACCTGAAAACTGTTCGAAAGCTGAAAGGATTAATTTCAGA
TTTCTTGCTTTTTCGATGCCATGTTCCATAAAAAGAATTGTATCGTCAAC
GTATTGAATTGAACCCAGAAAATATTATGATTTATAAGCTTTATGTCTAT
ATGATGTCAATTCCAGCGTGAAGATTGATTTTCTTTTAAGCAATGTATGT
GCTTGATGTGATGGGAAATGGGTTGCTTAGTGTGTGTGTAGGAGAAGACT
GGTTTGGTTTGGTTGGTACAAATCTAGTTCAATACAATTAGGATGGATGA
TGATTTTTGTTCTGGCTTAGTTGACATGGATCTGGAAGCTCTCGGAAGGG
AGCATCATTTGATCATATGGATCTATGAGTTGTCTATGATGATCTTCCAC
TTATATGAGTGTTGAAACCAGAATACGGTCTAGTTTCCAAAAAAGAAACA
GAGGAGGAGCGGGCGAGCTTCCTCCCCCTCCTCCCTACAACGTCTCCCTC
CACTCCGCCGCCGCCGTTGGAGGGCCACCGGGCGTTGCCCGTGTGGTGCC
GACGGTGTCGGTGCTCCACTCCCCGTGCTTGGTGTTTCGGCTCGGGAGGC
GACGTCCGGTGGCGGTGCTCTTCGGCAGGCGGTGGTCCGGTGGGGTGGTG
GTGGCGTAGCTCCTTGGCGGCGGGGCAGCGCCCTGCAGGCCTAGATCTGG
GCCTTGTGGGCCCGATCTGGGAGTTGGGCGGGCTGGCTCGGGCTCTGCGG
CTTCTCTGGCAGTCTCGAGGTCCGGAGCAGGTCAAGGTGGTGCGCCCGCT
GCCGTGCGGCGGCGGGGCTTTGGCCCGGCCGGGCCAGATACCAGGGGTAG
CGGTGACGGCGGCGCGCCTGCTACAATGCGGCGGCGGGGCTTCATGGGAC
CTTTGTTGGCCCGGCCGGGTTGTGCGCCTTGTTTGCCCTGCTGCTGCACC
CTGCCGTCGGCGGTGGAGGTTGGTCCCTCCCGTGTGGCTGCTGTTCTGCC
GCCCCTCGGTGGGCCTGGTTTGCCCCTGCTGCTACATCTGGTAGGCGGTG
GAGGTCGCTCCCTCCCGCGTGACTGCTATTCTGCCGCCCATCTCCTGTTG
TGTCTTCTCGGTCTTGTCGGCCTCACTTCCTTTGCCATAGTGAGACGATG
AGCGTGATCTCAAGACCGTGGTGGCGTGTGCTGGTGGGCGGCAAGCTCGG
TGGAGCGCTTCGGAGTGTCGAGGGTTGTGCTTTTTAGGGGCTAGGAGAAA
TCCCTGTCGGCTGGCCCGACACCGATGCGGTGACGCCTGCGGGTGCCACT
ATCCCTTCCTGAAGGGCGCCGGGAGTACTCCTTCCCTACACCCTACCCCT
CCGTGTATCGGGGGAAACCCTAGGACTAGTCCGGGCAGTAGCGTCGTCGT
CGTTGTAGTCCTCGCTTTTGTCGATCTGCCATTGTCGGCATTTGTTTCTC
TTTTCTTCTTTTGGGCTTGAGTGTGCTGCGGCCTAGCAAGCTTGTTCTCG
GATGGTTGCTATTTTAATATAGCGGGGCGAAAGCCTGTTTCGAGGAGGAA
ACCAGAATACCTATTTTTTTCCTATTGTCCCCATCCTTAGTCTAGACAAT
TCTTTTAAGTTCATTTTTCTTAGGAAGTGGAGTGTTTTGGGTGCAGGAAT
TTGGACTGAAATTTTACATTTTGAAATGGGTACACTTGAGAAACATGTGA
ATAAATACATAACACAATGGAGATTACACTAAGTTCTCAGTTTCTCACTT
CTTGGAAAATGAAGAGGCCAAAAAATAAGCGTGTTGGATTTGAAATGTCA
AAATAACGAGTGAAACTATGTATAGCAGGGAAGCACTAACGAAACCTCTA
ATTCAGTTCAGATGGTTCTTTAATTTGATAATTTCTTAAAATTTAGCAGT
TTTCTCCACACCAGGCAAACTTCATACACACTTTGATGAGTATTCTTTAT
GTTTTATGCATAGACAGTACTTTGTGATAATTGTGTGAAGGATTTTATAA
TCCCCACTTGTTGTCCAGATGGTTGCTAGTTATCGCTACTAATTTCCTTA
TACGAGGCAGTCAGACAGTCACTGTTTTACAGGATTGGTACCATAACTAA
AATACTGCCAGGGGAAAGAGGAATACCATAATCCGCTCCTTAAATTTGTT
TGTTATCCTGAGTGCAATTTTTGTTATTTTGTTTGCCTACCATTCTCAAA
TATTTGCTACAGTCTGTTTGTGTGCGTTGAATTTGGCATATTAATTATAT
TTGTTGCTTAACAATGTCAGAGTAATAATATGTGTAGCATGTGCCTTTTT
TGGCAAATAATGTACCGAGCTAGGAGTGGTTATAAAATCTTATACTCAGA
TTGTTGGGATCATCAAGTAATAAATCTCCTCGAATAATCAAAAGTTAAAA
CAATCTGGGATTATCAAGTCACAGAAATGAGGTTGGGTTAGTGTGCTGAG
AGTAAGGCTTCGGCCTTGGGCCATGCGGTGATCACCAAACAGCTGGCTGG
TTTTTTTGGACGAAGCAAGCATAACATGCTACTTGCTAGCTTGACTCAGC
TCAGCTCACTATTGCACAAGTTCAAGCTGAGCCATTAACGGACCGAGTCA
GCTCATGACTTCCGAGCTTTTCTACCTCTAACCACCCCTTAACAACTTGT
AGTTATGCCTGGGATTTATTGTGGCTATTTTTAGGTTCAAATTGCCATGT
TCTTTTTTGCTGTCGGTACTGCAGTTTATCTTCTCATTTTCAATTGTACT
TTATATTTGAGATTTCTCAAGTAATTTGAATGTATTTCATTATCTTCTTA
TTGTGGGGCTTTAAACCCAAACTCAAATTCAAAATTCTGGACTCTTCTTA
CTTTCTTTGTCATTCTTTTTTCTACTCTACCCAAGAGTTCTTTGCTTTAT
GCTAGTGACCTAGAAACGAGGGGTAACGAGATTGGGTTAGTGTGCTGAGA
GCAAGGCTTGGGCGGCTTGGGCCTTGGGCCATGCGGTGAACACAAACAGT
GGGCTGCTTTTCTGGATGAAGCAAGCATAACATGCTACTTGCTAGCTTGA
CTCAGCTCAGCTCACTATTGCACAAATTCAAGCTGAGTGACTGAGTCGGC
TCATGACTTCCGTGCTTTTCCACCCCTAACCACCGCTTAACAACTTGTAG
TTATGCCTGGGATTTATTGGGGCTATTTTTAGGATGAAAATTTCATGTTC
TTTTTTGCCGTGGGCACTGCAGTTTATCTTCTCATTTTTCAATATTGTTA
TATATTTGAGATTTCTCAAGTTATTTGAATGTATTTCATTATCTTCGTAT
TGTGGGGCTTTAAACCCAAACACAACATTCAAAATTCTGGACTCTTCTTA
CTTTCTTTGTCATTCTTTCTTTTCTATTCTAACCAAGAGTTCTTTGCTTT
ATGCTAGAGACCTAGAAACGAGGGGTACCTACATGGCATGCAATCTACTT
AGTATGGAATAAAAAGATGGTTGAACCCAAGACATGTACTAATCAACGAA
TACTATAGATGACAGCAAGTTTACATAAGTGGTAAGGTTGTAGACAGGGC
GGGATATCCTGCTATATCGCTACGCCACCCTGCAAAGTCCCTGAAACGCT
GTCAGGCTGACCGTGTAATTTTTGTGGCACGAAGCGGTCACCCCGCATAG
TCCACGAGTGTCCCGCACAACCCGCATAAACTCTCTTCCTGACAGCGAGG
GAAAAGCAGAGCGCGTGCTGATGGGTCGACAGCGGTGGTGCCGCCATCTC
TACGTCCGCCCCTCGCCCATGCCCCTGATGCTGGAGTACCTCCGTCGCTT
TGCTCACCATCAATATTCTTCATTGGCCCACCTACGTCCCTCGCCCATGC
CCTTGTCATGGCCGCGGCCCCTGTCCCGGCCGCTGCTCCACCGGAGCGGC
TTCACCTTGACTGTGCACCCCTTGTTGGCCGCCGCCGTCTGGCCAGCCAG
CATGTCCAGCGTCACCTCGCAGCGTGGCCACACGTCCACGGTCCACGTCT
GCAGCACCTTACCGAGCCTCACCTGCACCGGCACCCGTGCCTCTACCGTC
AGCGGCATGGCGCCCGCCATCGCCAGACTTCTCTCTGCTTGTCCATGAGC
AGCGCCACGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACACACAC
ACACATTCTCCCCGCCTGTCGAGGAACACCTGTCGTGGAAGACGAGGTAC
ACCGTGCCGACACCGCCGCGCCGAGGACGAGCATGAGGAAGAACACGCAG
CACGCGCGGCGGAGGAGGCGTTGCCGCGCTGGGCTTCCTGTACCCGCATG
CACGGTCTGGGGGCGGGACATGGAGCACCTGGTCCTTGGGCACGTGAACG
ATGTACGACGCGCCCGGCGGCGGCGCCACAGCTGTCGTCGTTGGTGCCGC
AGTGGCGTGGTCTCCGCGGACGCGTCGTGGCTGTTGTCCGGCGGAGGGGC
CGGTGGTGTGGATAGTGGAAGCATAGGGGCGGGGTGGACCCTGTCTGCCA
TTGGGTACGGGAGTGAGGAGCTGCCGAGCTGGGTGGCTGTGAGCTCGAGG
AGATGCACCGGAGCAGAGTGTGAGCTGAGAAGTAGCAGCTCGCCTGCTTC
TAGCAGTAGCATAGCATCAGCAGCTCGCTCGCTTGTCAGCAGTAGCAGCA
GCATTACTAGGATAGCAGTAGCAACTTGCTTGACCAGCGGGTTTATGCAG
GCAGACGCGGGCAGCCGCACCGTCCCGCATTAATTCGAGCGGTCTCTGGT
GGCCAGCCGCAAGCGCCCGCGAGTGTAGCAGCCTCCCGCTTATTCCTGTA
GTGGACAACCGCATCCCGCCCCACTTGCAACCTGAATAAGTGGTTCATCA
TGGGCATTAGGGGGATGAATTGGTTAAAGCTAATGGACTCAACTCTGATG
GAAACCCCAACTCTTTGTAGATTAGATGGCTTTAGGTGCTCCCCACGGTT
TCTTTTGTTTTCTATGTATGTTGCCTGAGTGCTTGTTTATATTTGACTTT
GCAATTGATGGTTTGTTAACGGTAGGTTGTCATATACAGAAACGGCTCTA
AAGCTTGACAGTTTGATCGGTGATGTAGAAGACGCCGTTTCCTCTTCTGT
GACTGCAAAACTTAAATCCCGTGGACAAATTCGAGAGGTATGATTCATGA
GATTCTGTGGTTGGGGGACAATTAAATTGTCAAGTGTTGATTTTGCCATC
GTCTTTTTTACTCCAGAAAACCCACCATGTTGCTATTGAATATCTTAAAA
AGATAGAAGATCTTTTGGCTTCAGTTACAAGGACCAGACCACAATGGACT
CGCCTCATATCTGCAGTGGATCACAGAGTGGACAGGTCTTTAGCTTTACT
AAGACCACAAGCTATTGTTGATCATCGAGGTCTCCTGTCATCCCTTGGCT
GGCCTCCTTCCCTTGCTGCAAAAATTTCAGATAGTAATTCTGGCAAATCA
GCAGAGACTGTGAACCCATTATTTTCAATGAAGGGTGACCTGACAAGGCA
GTATTCTGAAAGTTTTCTTTCGCTATGCAATCTACAGGAATTACAGAAGT
GCAGGAAAGCTAGGCAATTAGAAGGGTATAATGTGGGCAACCAACAACGT
CAACCATTATGGGTAATAGAGGAGTTAGTAAACCCATTATCTGCCGCAGC
ACAGCACCATTTTTCCAAATGGGTTGAGAATCCTGAATTTGTCTTTGCTC
TTGCTTTTAAGATAACAGCAGATTTTGTTGATTCCATGGATGAGATGCTA
CAGCCCCTTGTCGATAAGGCCAATCTTGTAGGGTATAGTTGCAGAGAGGA
GTGGATTTCAGGAATAGTTATTGCGTTGTCTACATACTTGGTGAAAGAGA
TATTTCCTAAGCAGATTGAACTTATTCAAGAAAGTGGCTCAAGCGATGGC
AGCACGCCATCTCAGGCAAGAATTGCATTTCTTAACCTTGTGGATCTGAT
GATATCTTTTGACAGGCGAACTCAAGATTTGATCTCAAGTACAGGACTGC
TACTTTCAGTAAAGGATGATGACAATTGGCAGAGGATCTCAGTGCTCTCT
GTCTTCTGCGATTGGCCAGACTGGCTAGAAGTATGGGCAGAGATTGAGAG
ACAAGAGATTTTTGATAACATGAAATCAGCAATGGAGAATGAGAAAAATT
GGATCAAGAGGATTGAAGGAGCAATGCTTGAGTACGGATCAGATGACTAC
AAATCTCCAGCAATAACCGGTGCTGTTCAGCAGGGCTTGTCTTCACTAAT
TGACCGTGCTAGACCTATTCCAAGCATTGCACTTAGGTCAGAATTCATTA
GGATTTCTGCTTCACCCATAATATCAGAATTCATTGGTTGCATGTTTCGG
AGGTGCCAAGAAGCAGAAGGACTAACTGCTCTGGCAGATGACAGTGCTTT
GATCAAAGTAGCACAGTCCATTAATGCAGCTCGGTACGTTGAATCCACAT
TGACACAATGGTGCGAGGATGTGTTCTTTCTCGAAATGGAAAGTCTACCT
GTAGTTGGCAAAAGTGGGAGTTTATTCCAGCAAGAGATAAATCAACTGAA
AGAGTTCATATCAGAATGGGTTGATAAGATTTCTACTGTTATTCTTAGGG
CATTTGATGCTTGCTCCCGGGATTATCTGAAAAACAAGAGGCAGTGGCAG
GAGCATTTGGAAGAACCAGCAATATCTAGGGCCATCATAGAATCTTCAGG
CTACATGCAAGAGAGACTGTCTAAGCTGGAAGATGATCTAAATGTGCTAG
ATTTTGTAACAGTATGGAGAGTTGTGGCGAGTGGAGTAGACCAGCTGCTT
TTCACAGGAATTTTCACCGGAAGCCCAAAGTTTAGTAATGGTGGGGTGGA
AAGGCTTGATGCTGATCTGAGTGTTCTGTTTGCTGTTTTTCAAGCTTGGT
GTCTGAGGCCTGCAGGCTTCTTCCCAAGACTGTCCGATGGATTGAAATTG
CTAAAGGTCGATGAGAAGCAACTAGGAGATAGACTGATTATAGATAAAAG
TTGGCTGAGGGAGCATGGTGTTAGGCACCTGACAGCTGTTGAGGCTGAAA
AGATAATAAAAAATAGGGTGTATGATGCATGATTTATAAGATGGTAGATA
TCAGGCGTGATAGTAACAAGATGTGTTGTCAAATTGGAATGGATTTACAC
TTTTTTTTACTTCAATA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.