Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA001195

[Submit comment/correction]

Sequence	AA001195
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA001195
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTCCACCCCCCACCCCCCGCGTCTATCTCGCCCGGTGCGGCTGGCAGGAG GCGGAGAGGACGACCACCCACCCACCCACCACCGCCGGAGCGCCGCGGCT GGCGTCCCGCGTTCCCCACCTCGCCAGCGCCGCCGCAGCTCGATCCGACC GACCGACCGACGGGCCGGCCGGCTTGGCCCCCTCATAGTAATGTAATGTC ACCCCTTCCTCTCTCATCGTGCTTCCGCATTGATGCCGTTTGAATTCTGC TTGTGTGTGAACGCGTGCTCGTGGGGATCGTTGTGGCCATTGCGCACGTT CGGCCGGTTTCGGAAAATCGCTTTTGCCGATCATGTGACCGGTAAAACTC CCGAATGACAAGTCGGGTTTGACCAAAAATGTAGCTTCGTCTGGTGGTAG GTTTGGGGGAAATTCGCAGACCGTTTGCCATGTATTCTGAATCCTCCATT GTGTTGATCAGTGGGTTGGTTGTCCAACTCTGGCGAGTTCAACCAGTCAA ACATTGGTGTCTGCGTTCATAACATTGTTAGAATTCCAATCACGTGGTCT TTATTAAGGGTTTTCTGCAAATTTGTGCTGTGGTGGGACCAGCGTTTTGG TTACCGGTCGGTAACCGGATATCCCGACCACCCTCGGGAAATTGGTTTAC CGGGCAAAAAATCCCAAATTTATTTGATTTTTTTGAAATTTATGAATTTT AATAAAAAGCCGTTGTAAATAGTCATAACGATGACTTTGAATTTGAATTT TGGAATTTAAATTCGTCCGGTAACCGGTCGGGATTTCCCGGTAACCGCGG TAACCGGAAATCCCGACCACCCTCGGGATTTTTTTCCTATCGGAAACCAA AACCTTGGGTGGGACTAACAACATGCGCTGTACCAAATTCTGCTTGCAGT AGTAGAGGATGGGTGTGATATCCCAGAAGATCGTGCCGGCGTGTGGGGCC CTGTGCTACTTCTGCCCCGGGCTCAGGGCACGGTCCAGACAACCTGTTAA GCGGTACAAGCAGATCCTTGCCGAAATCTTCCCCAGAACGCAGGTTGGGC GCCATCTCCATTATTTTTTCTATTTGTCTCGGAGTGCAGCATTAGCCGGA AATAATAATTATATATGTGGTTTTGTGATGTAGGATGAAGAACCAAACGA GAGAAGGATTGGGAAGCTGTGCGAGTACGCGGCAAAGAACCCTATTCGGG TGCCAAAGGTCCACCTCTTCTCTTTGGGACCTGAAATGTTTACTCAGTTC TCGTGTTAGCTGGCATTCCAACCTGTGTTGATGTTTGAGCAGATCACAGT TTACCTGGAGCAAAGGATTTACAAGGAATTAAGAACCGAGCAGTATGGCT TTGCAAAAATAGTGATGCTGATATACCGCAGACTGCTGGTTTCTTGTAAA GAACAAATGTTAGTCTTTCTTTCTCAACCGACTCTTTCGTTCATGTCACT GGATTCATAAGATTTTTTTGCAATAATGACCACCATCCGAGTGACATTCG TCACATCTCAATACTGTCATTTAGTCTGCGAGTTGGATATCCTACTTAGT TCGATATTATATCTGAATAGTCACAGATATAAAGGTGATCTTTTCAATGC AGGCCACTTTTTGCGAGTAGCTTATTAAGCATTGTACACACTCTTTTGGA TCAAAAGAGGCGGGATGACATGCGCATAATAGGGTGTGAAACCTTGTTTG ATTTTGCAGTCAATCAGGTATGTCCATTGGCATGATCATCACTTGATGAC ATTATTTGCCAGCAGGATACTTAATATGGCATAACGCCTATTTGGTCCTT ACATTTCTGTATATTCCAGCTGGATGGTACGTATCAATTCAATCTAGAAG GGCTGGTCCCAAGACTATGTGAACTAGCTCAAGAAGCAGGAGAGGATGAG AGAGCAACTTCACTGCGTGCTGCAGGCCTGCAAGCCCTTTCAGCTATGGT ACGTTCTGTCATAACACAATATCAAACAAGTGTTATATACTAGCATTGAT TGCTAACAATGGTGAAGAAATGAATGGGGAAATTTCATATGTAGCCTATG ACACTGTTACATAGCCAAAAGAGGTTGAAGTAACACTTCTGAGTTCTGAT ACACATTTTTTATATCAGAATATGATGCATTCCTTATCATGTGATGAATG AAGGATCATAAGCATTTAATATTAAATTCTAACCACATATCTTTGAAGCG ACTTAACATCCAGTTACTGTTTATTAACAGAAAAATTCTAGATAGATCTT TATCATTCTCACCACCTATTTGTACAGCCAAGGATGCTTACTTCAACTGT ATAGCTCTTTATTGTTCTTTTCCAGTTATTCTATCTGTGTGTCCACTGTA GTCATAGGACTCACATGAATGATGTCAATGGAAGTGTTATCATTTTTTAT TATATACTATTTTCCTGAAGCTTATACACTAACTACTTGAACATCTGAAC CTTGCAAACTAAATAATATCGGCAGCCATAATATTTTTCTTATGTTGAGC AGATCTGGTTCATGGGAGAGCTTTCTCATATCTCGTCAGAGTTCGATAAT GTAAGTAATATCTGAGCAGTTTTTTTTCTGTATCTTTCTGTTTTATATTT GCTACATTAAACAATATCTTGATTCCTGGCCTGTCTCCCCAGCTAGCATA GGTTTCATCCCCCCTATTTATGCTTATTTGGGTGAAACGTAAATTAACTT CCTCTCGTAAGATCTTGTCACATGATTAATAAGTGTTGCCTCTAGCATTG TTGCAGAAATATTGAGGCCACGTCTAGAGAAGAAATATTTAACTTGGTAT TGCATGCGAGTTTTCTTGCTGGTAGTTATTTTGGCTAGTATCAGATTTTC AACTGCTTGCACAAGCAGATTTTTTCTCCAAATATTCCATCATAGCTTTT CTTTTTTAATGTAAATTCCAGGTTGTTGAAGTTGTATTGGAAAACTACAA ACCTCAGAAGGCCCAAAATGATGATCAAGTTACCGTAGATCCAGACAACG AATTGATGCAACCAGCCCCGAAAACAGAGCAAAATCAAGAGCAAAATCCA TCCCCCTTTGTCATTTCTGAGATCCCCTCCTGGGAGAGCATAGTTAATAC TAAGGGAGGAATTAACCTGCCTATGTAATATAATCTTATTCCTATTCTTT TTATGTTTGATCTTTTCTTATTCAGTAGTTGGTTTCTCAACAGACTCCTG TGCTGCAGGGAATATGCCAAGGATCCTAAGTTTTGGTCCAGAATCTGTGT GCACAATATGGCCAAGCTTTCTAAGGAGGCAACAACATTCCGTCGTATTG TGGAGTGCTTGTTCCGGTGCTTTGGTAACAGTAGTTCTTGGTCAGCAGAA AATGGACTTGCTATGTGTTTATTATTAGACATGCAACTATTGGTGGAAAA CTCAGGTACTTCATTTGCACTCTTATGAGAGCAGAGATGTATATCATATA GAACAGGCTAGTTTTTTATTTTTTTAAATGAATTATGCAGGGCAAAACAT GCACTTACTGCTGTCTCTACTAATAAAGCATATTGAAAACAAAGCAATGT TGAAGCAACCAGACATGCAGCTTAGCATCGTGGAAGTGGCAGCTACCCTT GCAGAACTGTCCAGTACCCAGGCTTCAGCAGTAACTATAGGTGCCATAGG TGATCTAGTCAGGCATTTAAAGAGAACCTTCCATATTACTCTTGGTAGCA AAGACGCAGAACTAGTACAAAGGAGCGAAAATTTCCGAAAGGCTATAGAT GACTGCCTAGTGCAACTGTCAAAGAAGGTATGCTTTCTTTTCTCTCCGTC TGAAATTTATACAACATTTTAACTATTGCCCCTTAGCAGTCTGATATGTG CCATTATATGGTTAGCTTTAATATCTCTCCAAAATGCATGGACAGCTTAT CAACACTATTTTGTTGATCAGGTATCTGATGCTGGGCCAGTTCTTGACAT GATGGCAGTGATGCTAGAGAACATTGCAAGCACTCCTGTTGTAGCTAGAT CAACTGCAGCTGCTGTTTATCGCACAGCTCAAATAATTGCTGCTGTACCA AATTTGCAGTATCAGAATAAGGTATCTTCTCAAAGCAAAAAATGAAAAGA GAAGTGTTCAAATTCATCTCAGGAAGCAGTACTTTTTTCTGCGCCAAAAA TTTAACTTCTATATATGTTGCCAGGTGTTTCCGGAAGCTTTATTTCATCA GTTGCTCTTAACAATGATCCACCCTGATCATGAAGCTCGTGTTGCCGCAC ACCGCATATTTGCTATTGTCTTGGTCCCCTCTTCTGTTTCCCCCCTGATT CAAGCAAGCGCCTCAAGCCAGGCTAGGACACATGACATGCAGAGAACACT ATCTAGAGCTGTCTCCGTGTTTTCATCTTCAGCTGCTATCTTTGACAAGT TGAAAAAGGATAAGCGCTCAGACAATTCACAAGGAGAAAGCAAAAGTAAC GTTGGTGAAGAGACTGGAAATACTAAACGGCAAAACTTACCAGTGTCTCA AAGCCGCCGCAGTAGCATGAGAGTTCCTAACTTTTCCATGAAAAAGGGTC CATCAATGGCTCTGAGAGCTCCTTCATCTGTTAGAGCTCCTTCAATGGCT CTTAGAGGTCCTTCAATGGCTCTGAGAGCACCTTCTATGTCTGTTAAGGA AGGCAAAAGTTCCTCAAGCAACCCAGATGAAGAAATGGTACCATCAGTAT AACCTTTTCTCGAATTTAGGATTATTAACTAAAAATCAATGAAATTTGAG CAAAATATTTATTACAATAAATAATCATTTCTGCAATATGTCGAATGCGT CCAGGATACACTTTTGCTGAAGTTGAGCAGTCGTCAGATCACACTTTTGC TGACATCCATTTGGGCTCAAGGAGTATCTCCTGAAAACAGTCCTGCAAAC TATGAAGCCATTGCCCATACCTACAGCTTGCTTCTGTTGTTTTCTGGATG CAAGGTAACCTACTCTTCCAATCACAGCCAGTTTTCTCTTTATCATTCTT GGTATGATTATCAGATAGACACCAGATATTTAATGCAAAAGATTAATCTC ATGCTAACCAAGCCTCGCTTTCAACTATAGCATTGATTGATCTTTTAACC AAGTGCAACATTTAGTTGCCGAGGTGAGCTCGCTAGGTGTCTTAACAGGA CCACAAGTTCTGTTTGGACTTAGCCAGGACTTCTCTGAATTTTGAATATA ACTTTGCAATTATTTAAATATTTCAACACAAAACTTCTAAGTTTTATCGT GCGCTGGCATCGTGTTTTCATAAACTAGGCTGATAAAGATCGCATGACCA ATATGAACTATACACTTGGAAAGAGTGGAACCTCTGTATGTTGGAAGATC TCTCTGCAGATTCGATGAGTTCATTGGTTATTGTCGAGTAGTTCGAGCTG GTAACTTCTAAGTGGCCCTGAAGAAATGTTTGCTGGAGCTAATTTACACA ACATGTGCACCTTCTGTCCTAAGAAGTGTTATTCTGAGAAAGTTGTTATT TTCTACATGACCCATTAAAGTTTAGTGAAACTTCTCCCAAATTGGCACAC ACCATGCTTCTCATGATTTCTGGGTTTATCTTTCTTTTTCTTACCACCTT GTTCTTCACATGTTACTCATGATTTCCCTTTGCAATCCTTCTTAGTATGT TCTGTGAATTCTGTCTCCAATTTCTTTCTTGTTCCTTTTCCCCTTTTCGA GGAAAGTACGGAGGGGAGGCCCTAACCTAGAACTTTATGGAAGCAGAAAA AAGACAACAAGCAGAGGTTAAATGTTCGTGCATAGTGCATACTGCAGTAC GGTTCAGACAATGATACACAGGCAAATAATTGACAAAAGGAGTATATACG ATGCAGGCAAACGCCTAAACTGAAAGAAGACAGTAGGGGGACCCAAAAAA GAAGAGAAGCAAACTAGCTTTCCGAAGAGAAAACTTGTCACTTAGCCATG AGTACTGGATATTGTACTGTGCATCAAAAGCTCAAGCATATCAAGATAGT CATTTTTAATCTGTCTGGGCTGGCCTCAAGTTGTCAGAAACATTTCTGTT ATGCCACAGCCAAATCGTTAGAGAATACATATGGTAGTTAATCCCCATGA ATCTTTTATGTCTGGATGGAGAAGAGAGTGACCAGTCGAGAATATCACTT TGACATTTCTCTAGCTTGAGCGGTCACAGTTTAAACTGTTCTTTTTTGCA CATGAATGTCAACACAGGAGAGAAAAGTGTTCTACAATTTCAGCCAGTTT GACACCCAAAAGAGCAAAGTGCTCTATTTTTATTTCTTCTAATGAATGAA CATTTATTTCTTTGTTAGTTCAAAATGATAATAATGTCTATCATGATTAG CTCTTTTTCTGATGTTTTTCCTTTTTTTCCTTTTCTAGGCATCAATTTTT GAGGCTCTTACTCAGAGCTTTCAGGTTGCATTTGCTTTGAGGAACTATTC ACTTACTGAAGCAGGTACTGTAGTCAAACTGACTACAAGTATAATTAACA GGAAATATAAATTCAGCGTTCCGTATAACTTAAAAGTTGGCCTAATGTTG TGCATGAATCATGATGCTGTGATAATTGTTTGAGAAAATGATGCTTTAAT AATAACCTTGCACTAGAATTCAGTATTAATTCTCATGCACATATCTAAGT GTTCTGCTTGTTAACCTTGTAGATTCATTACCACCATCTCGGCGCCGCTC CTTGTTTACTCTGGCTACAGCCATGATTATTTTCTCTTCAAAAGCTTTCA ATGTGGCACCTCTTATTCCAATCTGTAAACAGATGATTAATGAGCGAACG GTATGTGATGAAAAATCTCCCTTTGGTTTATGTTTGTTTTTGTTATAGTA GTGTAGCATCCTAAACAAAACATGATTTTGCATGATGACATGCTTAGATA GTGAAGTGGTATGAAGATATTAATAGTGTCAAGCTGATATATCTGAACTA CTCTCTTAGCAATCAAGTCAACATGCTATCCTATATTATCTTATTCTTGT TAATTTCCAGAGTCTCTTTTTTCCCTTATATTTTGTTTTACATCGCAAGT CCGTAGCCTTTACTGAAAAGTTTGGTTAACGCATAATCACCTGAGTGTAA CACCCCGTCCAACAACAGGCCCCGGGGGTGTCACTCCTAGCAGCTTACTA GGATCTCTAGACTGGCCTCACAGACCAACATTAGTTTTTTCTGCACACTT TGTCCTTACTCATGCGCACCCGGTACCCACTTCCCGGTTGGTCTCATCCT CAAATTGCTCCAGGCCAAGCACGCTTAACCTGGAGGTTCTTTTTGAATGA GCTTCTGAAAATAAGCTGCAACTTGTTGGTATGAGTATCCTATCAATCCT ATTAAGCCATGTGCCTGGATCTCACATTGAGTAGTCGCACCAAACATGTA AAACAATGGCATCACTTGTACATCCTTCATTTATGATCTTCTTGATACCT GACAATGTACTATGGTTTTAGAGTTCATTTAGTAAGTACGGCGAAAATTC ATGGACCATAGTCATCTTCGTTGGTTTGTCCACCATGCTTCTATTACTAT TCCTAATTTGTGCAACACAGAGACCAAACTAGAGTTCAGTTGCATCTCTG TTTATTCTAGAGATTAACAAATTAGAGGTGTTCACTCTATTGACGGTTGA ATGCATTTTGGGTGCATCTTGATATCATGTTGGCATAGACTTTTTATCTT GAATTTGTTTGGTGTTTTACCTAGGGTGATCCATTCCTTCGTCTGGTGGA TGAGATTAGACTTCAGGCTGTGAAAGACTCCTCAGATGACCCATCGAAAA CATATGGATCGCCAGAGGACAATACTAGCGCGCTGAAGGCTCTTGCGGCA ATAGAACTATCAGAAAGTCAATCTCGAGACAGCATCGTCTCCACAATCAT GAACAATATAGCAAATATTATTGATGTACTGTTCACCTTCTCACTCGCCT CTTAGTTTATTGTTTGAACCAAGTTCCATGCAGCTGTAAGGTGACTTTTC TGTTTCTGCAGGCGGAGTTGCACAGTGTGAGAAGCCAACTGCTAAGTGAC TTCTCTCCCGATGACATGTGCCCACTGACCACTCAGTTCTTTGAAGAAAC TGCTGAGAGTTCATCTGAGAATGCCCACAATGAAGAGGTATGTGTGCCTC ATACTTATTACAGGTTTTACTTTTGAAACGGCCCTATTCTTGGACATCTA CTCTATCAGTCAAGTACTTTTGTTGCTAAAAGATGAATATATTCAATAGG GTATGCTGATTGACCTGGGAAATGATAATGATATTTTTGGGGAAGCTTCA GAAAGTACATCAGCTTCTGCATCCATTCCTGCTGGAGAACTTATGAGTAT CGATGAGCTTCTCGAAACAGTATGTCGTTGCTATGAAAAAACTATGATTT GTTCCATTATCCTTTTCTTTTTATTATCTTCTCAGTTCTGGCGTGTTGTC ATGATAAGATGGCCTGGCATGAGTTGATTACAAGTTCTCTCATCGTTTGA GCTACTCTTGGTTGCAATTATATATGTCCTGTAGTAGCATATCTAGGCAG GTTATCTCTGAAGGAAGTAACACATCTGGGCAGAAAACCGTGCTATGTTT ACCTCTGGCATGACAGCTGCTTTAACTAGCATCGTTTTTTCCCTCCTTTT GCCATTTCATAGCTTGGCGCAGACCCTACACAGCAAACAGAATATTCCCA AGTGTCGGCAGACATGCCATTCATGGAGATGACTAGCCAATGCGAAGCCC TCACGACAGGGAAACAGCAGAAGATGTCCACCTTCATGAGCTTCCAGCCG CAGAACACGCAAGCAGCTCCCATGCCCAACCATCAGCCCAACAACCAGAT GGAGTTTGATCTCTTGGATGATCCAGAACAGCCTCAGGTAGCATAGTTTC CACTCTCTCTCTCTCAATGTATATGAGAAAAGCATACACTATTAAGATAC TGACGTCGATAAGTTGTACTCTACGCAGGCCGGGGTGCAGAGCTTGAACC CGTTCCTGGACGACAACTGGGCCGCTTTCCCTCAGCACATGGACTCTGGC AACTCGCAGTCGGCCGATGATCCCTTCCAGCAAAATCTCCTGAAGCTGCC TGCGGCAAGCCCGTACGACCACTTCATGAGGGCCGCAGGCTCGACAGGCC AGAGTTGAAGTCAGCCTGGAGCAGCAGCAAGTCTGTCGCGCCCCGGTGTA TAGTACCGACAGGTAGGATCGAGGTCTCAGGTTCCTGCCGAACGATCGAA GATGTGGCAATTTTCCATGCTTGTTTCTGTAGAGGGTCTTCAACCGGATT CGACACCGATATTCTTTGTGTATAGTGACGGTGTGTATAGGTTTGGTCAC TGTGTTGTATGTATGTATATTATGCATCCCGGCATGTAGAGGGACCGAGG GGAGCAGAGCTTTCTGCCACAGAAAGTTTGTTTGTACATGCGTGTAACAT GGCTGCCGAATGCAGCGTATATAATGAAAGGAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.